Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	51598	219482	23	-0.7662
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	219540	12768450	6496	-0.0018
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	12775335	13257060	59	-0.7361
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	13257219	17108795	2259	0.0031
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	17108807	17130726	25	-0.5394
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	17131088	19964763	2036	-0.0013
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	19964942	19965212	2	-1.6326
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	19965531	22024236	1232	0.0045
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	22032698	22032844	2	-1.8854
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	22036751	30510942	4432	-0.0125
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	30511019	30511886	4	-2.4461
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	30512383	72541006	26346	-0.0051
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	72541086	72583736	47	-1.6627
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	72584492	89247843	10976	0.0014
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	89250546	89250793	2	-3.5896
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	89254112	104839358	9541	-0.0012
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	104841080	104852537	6	-0.9069
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	104856440	105820728	502	-0.0102
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	105820759	105823343	11	-0.6905
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	105823376	108531282	1943	-0.0023
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	108535758	108536400	2	-3.5617
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	108539019	110021609	707	-0.0041
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	110022113	110028010	12	-0.5768
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	110028266	110029038	6	-0.046
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	110034497	110041701	17	-1.5255
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	110044476	112497488	1955	-0.006
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	112497610	112498899	23	-0.3827
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	112498913	143553915	5239	-0.0062
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	143560896	143588030	8	0.7455
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	143588053	145014814	434	0.0477
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	145018512	145019320	2	-1.6514
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	145023030	147496467	803	0.0263
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	147509287	147510068	6	0.7924
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	147510101	147513004	8	0.3656
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	147513018	147515336	3	0.8352
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	147515351	150822151	1530	-0.0159
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	150822330	150852342	29	1.0399
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	150852741	151026302	177	-1e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	151028547	151035324	37	0.6394
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	151040529	165460652	9807	-0.0078
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	165462552	165471136	10	0.6206
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	165472270	167483561	1518	-0.0094
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	167500598	167508390	7	0.8178
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	167509025	173063028	3520	-0.0104
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	173063179	173068463	16	-2.8715
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	173068477	176926632	2510	-0.0058
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	176926768	176937131	36	-0.3442
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	176937188	194998709	12100	0.003
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	195005246	195089940	94	-0.5138
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	195090236	197374325	1375	0.0013
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	197377986	197379634	8	-1.1024
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	197380463	206504444	6037	0.0037
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	206505607	206523560	31	0.659
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	206524332	247191011	28470	-0.0019
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	2	2784	68533	34	-0.3465
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	2	72820	18200993	13685	0.0045
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	2	18201150	18202158	4	-1.0365
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	2	18203012	34562154	10381	-0.0021
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	2	34564232	34590561	38	-0.5077
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	2	34590667	46343636	8732	-9e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	2	46344305	46345776	2	-2.1533
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	2	46346186	52608385	4311	0.0032
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	2	52612257	52635046	33	-0.4729
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	2	52641453	86981712	21989	-6e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	2	86982714	87015364	3	-2.1737
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	2	87026238	87227404	20	-0.3396
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	2	87228462	87345862	85	-0.0565
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	2	87346172	87376453	14	0.3963
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	2	87379991	89609986	765	3e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	2	89612925	89756115	61	-0.8493
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	2	89756125	89771420	25	-0.3172
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	2	89771584	89912071	67	-0.8492
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	2	89938569	105502069	5969	-0.0027
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	2	105504557	105505244	2	-2.0953
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	2	105505648	129354548	14104	-0.0041
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	2	129354948	129356767	14	-0.6931
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	2	129356785	146580913	10475	-0.0037
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	2	146580927	146583404	21	0.6578
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	2	146594276	153495437	4198	-0.0044
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	2	153495731	153505030	4	-1.2121
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	2	153508815	159369731	3416	-0.0029
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	2	159370768	159371044	2	-1.3421
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	2	159372949	159665723	169	0.0206
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	2	159666866	159669219	3	-1.3049
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	2	159671533	208063200	29169	0.0041
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	2	208063423	208067581	16	-0.9064
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	2	208067721	242738129	22122	0.0024
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	35345	6621543	5836	0.019
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	6626128	6628332	23	-0.9318
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	6630078	9359217	2390	0.0039
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	9362670	9364223	2	-1.3122
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	9364415	15993002	4503	0.0082
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	15998855	16171664	140	-1.2446
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	16186774	16211751	38	-0.0273
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	16212012	16215560	3	-0.5795
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	16215633	16216183	5	-2.9022
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	16216329	21216660	2964	0.0104
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	21226323	21327376	79	-1.1142
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	21330242	26557149	4048	0.0058
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	26557711	26586902	19	-0.4766
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	26586965	26982235	309	0.0241
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	26983524	27029252	23	-1.094
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	27036333	59981640	20324	1e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	59982671	59982697	2	-1.6219
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	59982737	68828854	7119	0.0142
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	68828949	68831448	15	1.1047
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	68831476	100427148	15948	0.0105
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	100427166	100432004	36	0.39
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	100432111	131246388	18738	-0.0022
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	131249276	131288926	51	0.4676
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	131289614	137362688	3981	-0.0025
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	137365752	137379437	8	-1.1953
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	137381674	151811322	8771	-0.0047
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	151814251	151814701	4	-1.3129
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	151817452	156959241	3203	0.0038
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	156963791	156974836	27	0.6139
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	156974871	163418633	3900	0.0022
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	163418672	163419150	2	-1.728
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	163426404	163606060	91	0.0202
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	163620294	163625399	14	-0.5816
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	163626942	163990962	261	-0.0046
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	163995351	164007552	12	-0.5155
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	164011324	164023184	10	0.2987
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	164028410	164106547	44	-0.5539
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	164106575	174719597	6367	0.0056
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	174723329	174772374	24	0.6987
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	174782887	194360596	12789	0.004
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	194360656	194365597	19	-1.5469
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	194369129	196122605	1162	-5e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	196122635	196123134	4	-1.3669
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	196123769	196766953	320	0.0032
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	196767187	196960434	48	-0.6499
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	196964365	199380515	1171	-0.0041
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	4	2281	9074070	5246	0.0017
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	4	9079832	9088304	5	1.6228
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	4	9088443	9819488	546	0.0322
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	4	9823258	9844264	34	-1.1112
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	4	9844280	34455449	16982	0.0074
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	4	34462895	34495505	34	-0.5156
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	4	34495606	48775770	8968	0.0084
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	4	48777040	48962541	21	-0.3849
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	4	48962605	61619533	6100	-6e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	4	61623530	61624547	2	-1.619
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	4	61628281	63662953	1106	0.0154
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	4	63663001	63663804	3	0.887
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	4	63666781	68902978	3271	0.013
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	4	68909443	69163488	80	-0.4601
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	4	69163518	92288927	13988	0.0047
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	4	92293065	92299640	7	-1.2998
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	4	92300588	115393077	13730	0.0036
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	4	115393105	115403701	27	0.6892
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	4	115403715	116385317	605	-0.0138
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	4	116385553	116402053	30	-0.6196
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	4	116402149	172605106	34078	0.0046
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	4	172605921	172614299	12	-0.8525
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	4	172614351	173658916	639	0.0234
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	4	173659097	173692002	12	0.5883
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	4	173695420	176936356	1835	0.0023
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	4	176937360	176937459	2	-1.517
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	4	176937563	184716439	5620	0.0129
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	4	184719590	184721730	4	-1.2677
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	4	184728617	191261904	4418	-0.0037
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	5	68532	862806	351	-0.0242
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	5	870850	886628	15	-0.9585
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	5	905566	12844720	9846	0.0073
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	5	12853889	12891533	15	0.6114
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	5	12902201	17395482	3064	0.0055
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	5	17397236	17409239	8	-0.9991
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	5	17411269	46306865	17478	0.0051
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	5	46307687	46309259	6	-2.8115
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	5	46313969	57357343	5080	0.0037
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	5	57357403	57369272	32	-0.7687
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	5	57369290	78188206	12295	0.0032
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	5	78206284	78283704	61	0.6376
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	5	78284416	78424694	105	0.0224
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	5	78437202	78481227	29	0.6442
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	5	78486696	101283816	12900	0.0061
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	5	101288672	101290873	5	-1.2192
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	5	101292227	155407683	34902	-0.0039
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	5	155409350	155415307	14	-0.8088
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	5	155427828	180307129	16618	0.0014
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	5	180311316	180349813	15	0.6968
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	5	180350220	180722926	175	-0.059
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	6	94661	31388802	22419	-0.0026
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	6	31394255	31404430	11	1.0091
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	6	31417903	32562253	510	-0.0119
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	6	32562501	32590947	9	2.1922
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	6	32599282	32682359	27	0.5821
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	6	32686060	54039110	13768	-0.001
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	6	54039189	54039814	6	1.8236
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	6	54043307	77493251	12292	-1e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	6	77496587	77509408	20	0.5701
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	6	77509476	79028807	988	-0.0127
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	6	79028863	79070769	54	0.3351
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	6	79070821	103841522	15527	0.0043
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	6	103844669	103868754	46	-1.3025
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	6	103872163	126224456	13878	0.0029
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	6	126225385	126227887	2	-2.283
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	6	126228469	134307961	5185	-0.0012
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	6	134310764	134311325	2	-2.037
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	6	134313765	135377122	723	0.0023
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	6	135383947	135384931	2	-1.5856
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	6	135391263	170892930	24400	0.0021
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	7	52911	21932644	15687	0.0051
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	7	21939732	21946042	3	-1.988
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	7	21947298	125832922	61704	0.002
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	7	125832980	125833851	8	-1.6473
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	7	125834112	133435849	4707	0.0023
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	7	133435880	133437686	13	0.6517
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	7	133439421	141416149	5221	-0.0076
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	7	141416160	141433319	23	-0.361
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	7	141433599	141434001	6	-1.2115
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	7	141434097	141438576	11	-0.4986
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	7	141441750	142154515	448	-0.0119
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	7	142156294	142165914	29	0.7057
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	7	142176424	142926974	466	-0.019
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	7	142927368	143163931	94	0.2932
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	7	143174784	143504885	277	-0.0024
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	7	143527185	143535212	2	-2.0503
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	7	143540168	158819765	9731	3e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	8	21254	585220	329	-0.014
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	8	585443	585908	7	1.3718
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	8	591043	5581675	5753	0.008
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	8	5586134	5594564	29	-0.8544
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	8	5594622	6814411	1600	-0.0166
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	8	6814444	6825343	7	-0.6483
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	8	6827115	7158507	96	-0.0082
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	8	7174042	7174056	2	2.9864
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	8	7181231	12260380	3484	0.0082
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	8	12261219	12285876	19	-0.495
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	8	12286184	25028104	10503	0.0063
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	8	25030360	25040250	27	-2.5871
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	8	25047021	25466123	315	0.0197
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	8	25471121	25471186	2	-1.3264
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	8	25471367	39349816	8712	0.0014
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	8	39354760	39480846	47	-0.4386
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	8	39482086	66547110	14481	-0.002
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	8	66547162	66550117	3	-1.4458
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	8	66550133	72373302	3418	0.0033
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	8	72374735	72379153	11	0.5258
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	8	72382417	112360670	24110	0.0041
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	8	112363455	112364257	6	-0.8293
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	8	112364378	112364421	2	-2.7196
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	8	112364436	129825448	11652	0.0084
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	8	129832317	129833267	2	-2.9789
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	8	129846636	142653490	9811	0.0061
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	8	142653911	142654139	2	-1.6811
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	8	142655292	146268959	1442	-0.0204
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	9	36587	5069156	5241	0.005
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	9	5071416	5072995	11	-0.5649
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	9	5073003	5301567	175	-0.0116
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	9	5302391	5327707	12	0.6283
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	9	5330984	21967194	14066	0.007
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	9	21968443	21968615	2	-1.8296
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	9	21970470	25242131	2319	-0.0022
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	9	25250926	25340404	67	-1.1213
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	9	25342691	43542722	9473	0.0026
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	9	43552158	43707554	22	-0.6081
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	9	43712046	44569219	54	-0.0982
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	9	44667855	44795733	36	-1.2014
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	9	44806024	46221522	77	0.1298
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	9	46237416	46290679	14	-0.7716
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	9	46324233	140211215	48291	-9e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	10	62759	2544313	1929	-6e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	10	2552267	2552642	3	-1.7868
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	10	2552753	24415269	17294	0.0046
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	10	24417680	24418060	11	0.9337
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	10	24418914	47417400	12678	-0.0064
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	10	47432905	47468066	3	-1.8416
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	10	47480482	135356694	59098	0.0011
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	11	188510	4926943	2485	0.005
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	11	4928581	4933390	31	0.7754
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	11	4933441	5746177	789	0.0043
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	11	5746301	5765624	28	0.4136
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	11	5765715	20560149	10939	-0.0039
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	11	20561416	20563087	6	-0.9149
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	11	20565365	48729238	19202	0.0071
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	11	48729252	48740073	6	-1.1908
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	11	48740294	49715563	393	0.031
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	11	49716131	49716632	5	-1.269
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	11	49717264	54688341	538	0.0103
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	11	54691286	54738787	11	-0.6515
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	11	54766051	55119916	203	0.0302
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	11	55130608	55210152	60	-0.5375
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	11	55217259	134107001	52108	-0.0012
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	11	134107490	134109202	3	-1.3441
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	11	134113081	134449982	282	-0.0313
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	12	20703	739539	421	-0.0886
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	12	739577	744290	14	-0.7622
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	12	745615	3297916	1712	-0.0138
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	12	3297999	3298689	2	-1.9789
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	12	3299020	8248774	3393	-0.0104
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	12	8253317	8269518	11	0.884
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	12	8285095	9521823	642	-0.0357
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	12	9525137	9619559	24	-1.3739
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	12	9626236	31156324	15240	-0.0052
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	12	31160565	31301551	94	0.5058
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	12	31302088	33185927	1300	-0.0147
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	12	33192673	33198641	27	-0.7014
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	12	33199627	71501722	22322	0.0015
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	12	71503595	71506911	2	-2.1737
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	12	71507145	132288262	39790	0.0024
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	13	17924949	36969135	13544	0.0013
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	13	36970036	36982757	16	0.8412
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	13	36986330	114126499	50680	0.0081
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	14	18072124	37204330	11671	0.0015
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	14	37204555	37207318	2	-1.2643
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	14	37207927	37864290	386	-0.028
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	14	37869205	37869948	9	-0.8208
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	14	37870125	41924915	2527	-5e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	14	41925216	41925467	3	-1.3113
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	14	41926726	99226524	37646	0.0013
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	14	99227544	99230133	2	-2.4339
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	14	99232130	105059083	2716	0.0025
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	14	105071276	105079690	4	-2.0692
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	14	105082353	105601409	150	0.0266
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	14	105601732	105638145	17	-2.0925
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	14	105640508	106356482	416	0.0251
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	15	18276341	19055354	152	-0.0768
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	15	19066371	19819102	166	-0.4045
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	15	19819838	22036921	1038	-0.0308
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	15	22044109	22054359	4	-1.7194
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	15	22054753	100286563	50655	-0.0046
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	16	777	32031832	20077	-0.0053
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	16	32054387	32496123	68	-0.3199
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	16	32496402	32496410	5	-4.4241
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	16	32516775	33539331	166	-0.3419
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	16	33550900	54037319	6709	0.0039
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	16	54037911	54038612	3	-1.1247
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	16	54038722	54354095	275	-4e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	16	54355723	54356280	3	3.1107
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	16	54361849	54374147	11	0.2855
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	16	54374206	54379945	4	1.6292
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	16	54387058	68737726	8768	0.0057
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	16	68743639	68755831	5	-1.1032
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	16	68755857	72922350	2505	0.0041
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	16	72926192	72964880	11	-0.9557
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	16	73009537	80387976	7011	0.0053
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	16	80389544	80392610	7	-1.2136
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	16	80395347	81718123	1483	0.0024
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	16	81721530	81742581	33	-1.5078
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	16	81743215	88815036	5329	-0.0102
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	17	526	16595026	10494	-0.0188
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	17	16598056	16682240	14	-0.6076
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	17	16682253	18258119	918	-0.0015
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	17	18260587	18405946	30	0.5473
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	17	18409922	36676583	9499	-0.0038
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	17	36676603	36683699	18	-0.8504
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	17	36683712	38787791	1111	-0.0068
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	17	38794116	38795447	3	-1.2921
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	17	38799230	41568981	1432	-0.019
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	17	41569489	41707706	83	-0.3013
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	17	41708649	42139861	56	-0.6015
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	17	42140165	53042488	7009	-6e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	17	53043332	53043992	2	-1.8885
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	17	53046992	61859200	4489	0.0027
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	17	61861309	61862056	2	-1.2251
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	17	61862086	72588815	7026	-0.0011
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	17	72588898	72594077	2	-1.3555
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	17	72594399	78643088	3066	-0.0018
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	18	1543	36512725	22818	-2e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	18	36514418	36519387	19	-2.0086
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	18	36522022	62057829	17649	0.0055
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	18	62057846	62062341	10	-0.8275
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	18	62062569	76116029	10267	0.0033
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	19	41910	20944207	9295	-0.0095
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	19	20944898	20945314	3	-1.6557
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	19	20946008	40541162	7512	-0.0039
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	19	40541333	40553688	22	-0.6649
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	19	40558584	53463095	6556	-0.0159
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	19	53467186	53484734	12	-1.0057
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	19	53489629	56823625	1535	-0.0158
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	19	56834164	56849227	17	-0.8708
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	19	56849249	59489660	1780	-0.0124
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	19	59497342	59503137	4	-1.161
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	19	59504487	63789666	2593	-0.0119
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	20	9305	1518737	1214	-0.0323
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	20	1518752	1519103	5	0.9922
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	20	1519272	14740812	9951	-1e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	20	14740834	14740838	2	-2.4525
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	20	14741415	62426597	31294	8e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	21	9758742	9993437	56	-0.6551
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	21	9997977	46921385	24343	5e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	22	14432528	22660218	4613	-0.0197
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	22	22660269	22661967	2	-3.4673
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	22	22662625	22737124	35	-0.3289
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	22	22742126	49581321	18886	-0.0034
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	X	108477	5043259	1788	0.0207
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	X	5044378	5197538	134	-1.0147
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	X	5201271	43498131	24941	0.0182
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	X	43505580	43506243	2	-1.6538
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	X	43506353	76266264	13256	-0.0127
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	X	76270041	76440325	18	-0.8058
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	X	76461534	90060463	7221	-0.0162
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	X	90060960	90064708	4	-1.0786
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	X	90065406	90855168	376	0.0038
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	X	90857162	90858396	7	-0.9689
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	X	90858427	133172954	23593	-0.0014
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	X	133175146	133175918	3	-1.2374
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	X	133183414	154835548	13235	0.0026
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	Y	2710438	6161425	838	-2.7711
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	Y	6167901	6470097	124	-4.0129
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	Y	6472634	7052648	239	-3.0938
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	Y	7054405	7055523	2	-7.4436
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	Y	7056131	7459842	182	-3.1085
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	Y	7460746	10369564	1202	-3.5622
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	Y	10384614	14099670	951	-3.2335
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	Y	14099736	14103917	3	-7.7452
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	Y	14104283	17572959	1838	-3.3376
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	Y	17577516	17807379	97	-3.9005
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	Y	17809644	18084284	144	-3.2931
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	Y	18085938	19488345	673	-3.9082
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	Y	19488618	22289621	1090	-3.388
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	Y	22292291	24648044	509	-3.8136
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	Y	24650701	24803050	32	-2.764
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	Y	24811102	24830625	14	-4.1483
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	Y	24831089	24919963	30	-2.5025
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	Y	24920187	25725360	94	-4.2613
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	Y	25776875	25938472	35	-2.6945
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	Y	25944418	26011215	22	-4.1603
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	Y	26013790	26127678	35	-2.8092
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	Y	26129939	26687080	196	-3.8551
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	Y	26699115	26731140	12	-5.479
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	Y	26731407	26833326	44	-3.6982
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	Y	26847504	57427647	183	-2.9097
