Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	61735	229619	23	-0.7662
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	229677	12845863	6496	-0.0018
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	12852748	13384473	59	-0.7361
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	13384632	17236208	2259	0.0031
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	17236220	17258139	25	-0.5394
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	17258501	20092176	2035	-0.0014
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	20092355	20092625	2	-1.6326
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	20092944	22151649	1231	0.0049
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	22160111	22160257	2	-1.8854
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	22164164	30738355	4432	-0.0125
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	30738432	30739299	4	-2.4461
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	30739796	72768418	26425	-0.005
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	72768498	72811148	47	-1.6627
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	72811904	89475255	10970	0.0013
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	89477958	89478205	2	-3.5896
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	89481524	105037835	9538	-0.0011
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	105039557	105051014	6	-0.9069
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	105054917	106019205	502	-0.0102
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	106019236	106021820	11	-0.6905
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	106021853	108729759	1943	-0.0023
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	108734235	108734877	2	-3.5617
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	108737496	110220086	707	-0.0041
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	110220590	110226487	12	-0.5768
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	110226743	110227515	6	-0.046
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	110232974	110240178	17	-1.5255
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	110242953	112695965	1955	-0.006
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	112696087	112697376	23	-0.3827
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	112697390	144842558	5235	-0.0064
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	144849539	144876673	8	0.7237
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	144876696	146548190	434	0.0485
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	146551888	146552696	2	-1.6514
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	146556406	149229843	803	0.027
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	149242663	149243444	6	0.7924
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	149243477	149246380	8	0.3656
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	149246394	149248712	3	0.8352
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	149248727	152555527	1531	-0.0161
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	152555706	152585718	29	1.0399
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	152586117	152759678	177	-1e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	152761923	152768700	37	0.6394
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	152773905	167194028	9807	-0.0078
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	167195928	167204512	10	0.6206
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	167205646	169216937	1517	-0.0095
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	169233974	169241766	7	0.8178
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	169242401	174796405	3520	-0.0104
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	174796556	174801840	16	-2.8715
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	174801854	178660009	2510	-0.0058
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	178660145	178670508	36	-0.3442
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	178670565	196732086	12100	0.003
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	196738623	196823317	94	-0.5138
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	196823613	199107702	1375	0.0013
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	199111363	199113011	8	-1.1024
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	199113840	208437821	6038	0.0038
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	208438984	208456937	31	0.659
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	1	208457709	249224388	28467	-0.0019
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	2	12784	78533	34	-0.3465
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	2	82820	18337512	13683	0.0045
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	2	18337669	18338677	4	-1.0365
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	2	18339531	34708650	10381	-0.0021
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	2	34710728	34737057	38	-0.5077
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	2	34737163	46490132	8730	-9e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	2	46490801	46492272	2	-2.1533
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	2	46492682	52754881	4312	0.0032
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	2	52758753	52781542	33	-0.4729
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	2	52787949	87128201	21984	-6e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	2	87129203	87161853	3	-2.1737
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	2	87172727	87373893	20	-0.3396
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	2	87374951	87492351	85	-0.0565
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	2	87492661	87522942	14	0.3963
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	2	87526480	89972681	762	-7e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	2	89975620	90118810	61	-0.8493
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	2	90118820	90134115	25	-0.3172
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	2	90134279	90274766	67	-0.8492
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	2	90301264	106135637	5969	-0.0027
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	2	106138125	106138812	2	-2.0953
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	2	106139216	129638078	14103	-0.0041
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	2	129638478	129640297	14	-0.6931
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	2	129640315	146864443	10472	-0.0036
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	2	146864457	146866934	21	0.6578
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	2	146877806	153787191	4198	-0.0044
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	2	153787485	153796784	4	-1.2121
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	2	153800569	159661485	3416	-0.0029
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	2	159662522	159662798	2	-1.3421
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	2	159664703	159957477	169	0.0206
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	2	159958620	159960973	3	-1.3049
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	2	159963287	208354955	29172	0.004
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	2	208355178	208359336	16	-0.9064
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	2	208359476	243089456	22122	0.0024
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	60345	6646543	5836	0.019
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	6651128	6653332	23	-0.9318
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	6655078	9384217	2390	0.0039
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	9387670	9389223	2	-1.3122
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	9389415	16017998	4502	0.0082
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	16023851	16196660	140	-1.2446
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	16211770	16236747	38	-0.0273
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	16237008	16240556	3	-0.5795
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	16240629	16241179	5	-2.9022
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	16241325	21241656	2965	0.0104
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	21251319	21352372	79	-1.1142
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	21355238	26582145	4048	0.0059
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	26582707	26611898	19	-0.4766
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	26611961	27007231	309	0.0241
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	27008520	27054248	23	-1.094
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	27061329	60006600	20325	1e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	60007631	60007657	2	-1.6219
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	60007697	68746164	7118	0.0142
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	68746259	68748758	15	1.1047
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	68748786	98944458	15942	0.0105
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	98944476	98949314	36	0.39
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	98949421	129763698	18738	-0.0022
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	129766586	129806236	51	0.4676
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	129806924	135879998	3981	-0.0025
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	135883062	135896747	8	-1.1953
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	135898984	150328632	8771	-0.0047
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	150331561	150332011	4	-1.3129
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	150334762	155476547	3203	0.0038
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	155481097	155492142	27	0.6139
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	155492177	161935939	3899	0.0022
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	161935978	161936456	2	-1.728
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	161943710	162123366	91	0.0202
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	162137600	162142705	14	-0.5816
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	162144248	162508268	261	-0.0046
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	162512657	162524858	12	-0.5155
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	162528630	162540490	10	0.2987
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	162545716	162623853	44	-0.5539
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	162623881	173236903	6368	0.0056
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	173240635	173289680	24	0.6987
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	173300193	192877902	12789	0.004
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	192877962	192882903	19	-1.5469
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	192886435	194641316	1162	-5e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	194641346	194641845	4	-1.3669
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	194642480	195285664	320	0.0032
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	195285898	195474763	48	-0.6499
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	3	195478694	197896118	1171	-0.0041
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	4	12281	9464972	5246	0.0017
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	4	9470734	9479206	5	1.6228
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	4	9479345	10210390	546	0.0322
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	4	10214160	10235166	34	-1.1112
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	4	10235182	34779054	16982	0.0074
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	4	34786500	34819110	34	-0.5156
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	4	34819211	49081013	8967	0.0084
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	4	49082283	49267784	21	-0.3849
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	4	49267848	61936938	6098	-6e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	4	61940935	61941952	2	-1.619
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	4	61945686	63980358	1106	0.0154
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	4	63980406	63981209	3	0.887
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	4	63984186	69261064	3280	0.0125
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	4	69282205	69484109	83	-0.4229
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	4	69485840	92069904	13979	0.0046
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	4	92074042	92080617	7	-1.2998
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	4	92081565	115173628	13733	0.0036
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	4	115173656	115184252	27	0.6892
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	4	115184266	116165868	605	-0.0138
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	4	116166104	116182604	30	-0.6196
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	4	116182700	172368531	34082	0.0046
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	4	172369346	172377724	12	-0.8525
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	4	172377776	173422341	639	0.0234
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	4	173422522	173455427	12	0.5883
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	4	173458845	176699362	1835	0.0023
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	4	176700366	176700465	2	-1.517
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	4	176700569	184479445	5620	0.0129
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	4	184482596	184484736	4	-1.2677
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	4	184491623	191027923	4417	-0.0037
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	5	15532	809806	350	-0.0248
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	5	817850	833628	15	-0.9585
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	5	852566	12791720	9849	0.0073
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	5	12800889	12838533	15	0.6114
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	5	12849201	17342482	3064	0.0055
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	5	17344236	17356239	8	-0.9991
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	5	17358269	46271108	17475	0.005
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	5	46271930	46273502	6	-2.8115
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	5	46278212	57321586	5079	0.004
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	5	57321646	57333515	32	-0.7687
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	5	57333533	78152450	12297	0.0033
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	5	78170528	78247948	61	0.6376
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	5	78248660	78388938	105	0.0224
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	5	78401446	78445471	29	0.6442
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	5	78450940	101255917	12900	0.0061
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	5	101260773	101262974	5	-1.2192
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	5	101264328	155475105	34901	-0.0038
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	5	155476772	155482729	14	-0.8088
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	5	155495250	180374523	16620	0.0014
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	5	180378710	180417207	15	0.6968
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	5	180417614	180790320	175	-0.059
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	6	149661	31280823	22418	-0.0026
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	6	31286276	31296451	11	1.0091
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	6	31309924	32454275	510	-0.0119
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	6	32454523	32482969	9	2.1922
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	6	32491304	32574381	27	0.5821
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	6	32578082	32688632	69	0.0178
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	6	32688853	32692227	10	0.635
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	6	32700684	53931151	13690	-0.0015
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	6	53931230	53931855	6	1.8236
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	6	53935348	77436532	12292	0
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	6	77439868	77452689	20	0.5701
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	6	77452757	78972088	988	-0.0126
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	6	78972144	79014050	54	0.3351
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	6	79014102	103734829	15526	0.0043
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	6	103737976	103762061	46	-1.3025
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	6	103765470	126182763	13882	0.0029
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	6	126183692	126186194	2	-2.283
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	6	126186776	134266268	5186	-0.0012
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	6	134269071	134269632	2	-2.037
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	6	134272072	135335429	723	0.0023
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	6	135342254	135343238	2	-1.5856
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	6	135349570	171051005	24402	0.0021
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	7	43355	21966119	15687	0.0051
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	7	21973207	21979517	3	-1.988
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	7	21980773	126045686	61707	0.002
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	7	126045744	126046615	8	-1.6473
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	7	126046876	133785309	4708	0.0024
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	7	133785340	133787146	13	0.6517
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	7	133788881	141769680	5221	-0.0076
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	7	141769691	141786850	23	-0.361
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	7	141787130	141787532	6	-1.2115
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	7	141787628	141792107	11	-0.4986
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	7	141795281	142474939	448	-0.0116
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	7	142476719	142486345	29	0.7057
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	7	142486495	143216852	464	-0.0191
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	7	143217246	143532998	94	0.2932
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	7	143543851	143873952	277	-0.0024
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	7	143896252	143904279	2	-2.0503
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	7	143909235	159127004	9732	3e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	8	31254	595220	329	-0.014
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	8	595443	595908	7	1.3718
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	8	601043	5594267	5754	0.008
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	8	5598726	5607156	29	-0.8544
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	8	5607214	6827001	1600	-0.0166
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	8	6827034	6837933	7	-0.6483
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	8	6839705	7171097	96	-0.0082
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	8	7186632	7186646	2	2.9864
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	8	7193821	12216009	3482	0.0082
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	8	12216848	12241505	19	-0.495
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	8	12241813	24972187	10504	0.0063
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	8	24974443	24984333	27	-2.5871
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	8	24991104	25410206	315	0.0197
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	8	25415204	25415269	2	-1.3264
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	8	25415450	39230659	8713	0.0014
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	8	39235603	39361689	47	-0.4386
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	8	39362929	66384556	14482	-0.0019
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	8	66384608	66387563	3	-1.4458
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	8	66387579	72210748	3420	0.0033
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	8	72212181	72216599	11	0.5258
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	8	72219863	112291494	24111	0.0041
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	8	112294279	112295081	6	-0.8293
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	8	112295202	112295245	2	-2.7196
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	8	112295260	129756266	11654	0.0084
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	8	129763135	129764085	2	-2.9789
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	8	129777454	142584308	9811	0.0061
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	8	142584729	142584957	2	-1.6811
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	8	142586110	146298155	1442	-0.0204
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	9	46587	5079156	5243	0.0052
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	9	5081416	5082995	11	-0.5649
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	9	5083003	5311567	175	-0.0116
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	9	5312391	5337707	12	0.6283
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	9	5340984	21977194	14068	0.007
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	9	21978443	21978615	2	-1.8296
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	9	21980470	25252131	2318	-0.0021
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	9	25260926	25306075	38	-1.0968
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	9	25308251	25308692	3	-2.3281
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	9	25309690	25350404	26	-1.0179
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	9	25352691	43602726	9478	0.0026
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	9	43612162	43767558	22	-0.6081
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	9	43772050	44629223	54	-0.0982
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	9	44727859	44855737	36	-1.2014
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	9	44866028	46331526	77	0.1298
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	9	46347420	46400683	14	-0.7716
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	9	46434237	141091394	48298	-8e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	10	72759	2554313	1929	-6e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	10	2562267	2562642	3	-1.7868
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	10	2562753	24375263	17293	0.0045
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	10	24377674	24378054	11	0.9337
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	10	24378908	47897394	12678	-0.0064
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	10	47912899	47948060	3	-1.8416
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	10	47960476	135506704	59096	0.0011
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	11	198510	4970367	2484	0.005
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	11	4972005	4976814	31	0.7754
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	11	4976865	48772662	30961	0.0033
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	11	48772676	48783497	6	-1.1908
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	11	48783718	49758987	393	0.031
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	11	49759555	49760056	5	-1.269
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	11	49760688	54931765	538	0.0103
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	11	54934710	54982211	11	-0.6515
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	11	55009475	55363340	203	0.0302
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	11	55374032	55453576	60	-0.5375
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	11	55460683	134601791	52101	-0.0012
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	11	134602280	134603992	3	-1.3441
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	11	134607871	134944770	282	-0.0313
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	12	150442	869278	421	-0.0886
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	12	869316	874029	14	-0.7622
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	12	875354	3427655	1712	-0.0138
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	12	3427738	3428428	2	-1.9789
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	12	3428759	8357507	3393	-0.0105
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	12	8362050	8378251	11	0.884
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	12	8393828	9630556	641	-0.0352
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	12	9633870	9713674	22	-1.4217
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	12	9714954	31265057	15240	-0.0053
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	12	31269298	31410284	93	0.5151
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	12	31410821	33294660	1300	-0.0147
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	12	33301406	33307374	27	-0.7014
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	12	33308360	73215455	22320	0.0015
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	12	73217328	73220644	2	-2.1737
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	12	73220878	133778189	39788	0.0024
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	13	19026949	38071135	13542	0.0012
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	13	38072036	38084757	16	0.8412
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	13	38088330	115108397	50678	0.0081
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	14	19002124	38134579	11670	0.0015
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	14	38134804	38137567	2	-1.2643
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	14	38138176	38794539	386	-0.028
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	14	38799454	38800197	9	-0.8208
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	14	38800374	42855165	2527	-4e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	14	42855466	42855717	3	-1.3113
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	14	42856976	100156771	37644	0.0013
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	14	100157791	100160380	2	-2.4339
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	14	100162377	105988038	2716	0.0025
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	14	106000231	106008645	4	-2.0692
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	14	106011308	106530364	150	0.0266
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	14	106530687	106567100	17	-2.0925
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	14	106569463	107285437	416	0.0251
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	15	20016328	20795340	152	-0.0768
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	15	20806357	22317738	166	-0.4045
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	15	22318474	24485828	1038	-0.0308
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	15	24493016	24503266	4	-1.7194
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	15	24503660	102469040	50652	-0.0046
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	16	60777	32124331	20075	-0.0053
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	16	32146886	32588622	68	-0.3199
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	16	32588901	32588909	5	-4.4241
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	16	32609274	33631830	166	-0.3419
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	16	33643399	55479818	6709	0.0039
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	16	55480410	55481111	3	-1.1247
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	16	55481221	55796594	275	-4e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	16	55798222	55798779	3	3.1107
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	16	55804348	55816646	11	0.2855
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	16	55816705	55822444	4	1.6292
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	16	55829557	70180225	8768	0.0057
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	16	70186138	70198330	5	-1.1032
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	16	70198356	74364849	2424	0.0036
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	16	74368691	74407379	11	-0.9557
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	16	74452036	81830475	7011	0.0053
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	16	81832043	81835109	7	-1.2136
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	16	81837846	83160622	1483	0.0024
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	16	83164029	83185080	33	-1.5078
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	16	83185714	90287535	5332	-0.0104
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	17	526	16654301	10495	-0.0188
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	17	16657331	16741515	14	-0.6076
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	17	16741528	18317394	918	-0.0015
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	17	18319862	18465221	30	0.5473
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	17	18469197	39423057	9497	-0.0038
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	17	39423077	39430173	18	-0.8504
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	17	39430186	41432265	1111	-0.0068
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	17	41438590	41439921	3	-1.2921
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	17	41443704	44213204	1432	-0.019
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	17	44213712	44351929	83	-0.3013
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	17	44352872	44784678	56	-0.6015
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	17	44784982	55687489	7011	-6e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	17	55688333	55688993	2	-1.8885
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	17	55691993	64428738	4488	0.0026
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	17	64430847	64431594	2	-1.2251
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	17	64431624	75077220	7026	-0.0011
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	17	75077303	75082482	2	-1.3555
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	17	75082804	81049726	3066	-0.0018
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	18	11543	38258727	22817	-2e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	18	38260420	38265389	19	-2.0086
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	18	38268024	63906849	17647	0.0054
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	18	63906866	63911361	10	-0.8275
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	18	63911589	78015057	10267	0.0033
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	19	90910	21152367	9294	-0.0096
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	19	21153058	21153474	3	-1.6557
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	19	21154168	35849322	7512	-0.0039
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	19	35849493	35861848	22	-0.6649
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	19	35866744	48771283	6556	-0.0159
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	19	48775374	48792922	12	-1.0057
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	19	48797817	52131813	1535	-0.0158
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	19	52142352	52157415	17	-0.8708
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	19	52157437	54797848	1780	-0.0124
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	19	54805530	54811325	4	-1.161
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	19	54812675	59097854	2593	-0.0119
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	20	61305	1570737	1214	-0.0323
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	20	1570752	1571103	5	0.9922
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	20	1571272	14792812	9954	-2e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	20	14792834	14792838	2	-2.4525
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	20	14793415	62956153	31294	8e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	21	10736871	10971566	56	-0.6551
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	21	10976106	48096957	24342	5e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	22	16052528	24330218	4613	-0.0197
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	22	24330269	24331967	2	-3.4673
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	22	24332625	24407124	35	-0.3289
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	22	24412126	51234455	18886	-0.0035
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	X	168477	5033259	1788	0.0206
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	X	5034378	5187538	134	-1.0147
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	X	5191271	43613187	24943	0.0183
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	X	43620636	43621299	2	-1.6538
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	X	43621409	76349873	13264	-0.0127
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	X	76353650	76523952	18	-0.8058
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	X	76545159	90968512	7577	-0.0139
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	X	90970506	90971740	7	-0.9689
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	X	90971771	133345288	23598	-0.0012
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	X	133347480	133348252	3	-1.2374
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	X	133355748	155182354	13231	0.0025
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	Y	2650438	6101425	871	-2.6983
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	Y	6107901	6410097	124	-4.0129
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	Y	6412634	6992648	245	-3.048
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	Y	6994405	6995523	2	-7.4436
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	Y	6996131	7399842	182	-3.1085
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	Y	7400746	9759564	1203	-3.5577
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	Y	9774614	15590276	951	-3.2335
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	Y	15590342	15594523	3	-7.7452
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	Y	15594889	19063565	1842	-3.3346
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	Y	19068122	19297985	97	-3.9005
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	Y	19300250	19574890	144	-3.2931
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	Y	19576544	21028957	673	-3.9082
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	Y	21029230	23880233	1091	-3.3878
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	Y	23882903	26238656	509	-3.8136
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	Y	26241313	26393662	32	-2.764
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	Y	26401714	26421237	14	-4.1483
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	Y	26421701	26510575	30	-2.5025
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	Y	26510799	27315972	94	-4.2613
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	Y	27367487	27529084	35	-2.6945
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	Y	27535030	27601827	22	-4.1603
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	Y	27604402	27718290	35	-2.8092
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	Y	27720551	28277692	196	-3.8551
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	Y	28289727	28321752	12	-5.479
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	Y	28322019	28423938	44	-3.6982
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E01_895712	Y	28438116	59018259	183	-2.9097
