Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	1	51598	16022502	8400	0.0031
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	1	16026084	16026512	6	-1.9481
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	1	16026788	16920992	382	0.0186
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	1	16921066	17158797	93	0.372
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	1	17158906	25455928	5256	0.0014
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	1	25465715	25534592	30	-1.4623
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	1	25534799	34875241	4964	0.0078
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	1	34875257	34886855	20	-0.7339
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	1	34888129	54862788	11032	0.0098
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	1	54865879	54869038	3	-1.8935
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	1	54873453	72541086	12717	-7e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	1	72541504	72583721	45	-1.4653
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	1	72583736	75823432	1927	-7e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	1	75827351	75827442	2	-2.4774
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	1	75832097	103958684	18132	0.0052
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	1	103958840	104104926	33	-0.4062
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	1	104105024	105814277	917	0.0358
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	1	105814899	105823246	11	-0.6408
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	1	105823275	110008010	2651	0.0024
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	1	110008844	110044476	39	0.4055
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	1	110046521	150822330	10008	0.024
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	1	150822391	150853218	34	-1.3677
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	1	150857118	247191011	65719	0.0054
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	2	2784	4194327	2990	0.0019
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	2	4194344	4200414	28	0.5258
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	2	4200524	19549065	11689	-0.0034
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	2	19550134	19550305	2	-1.8812
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	2	19550371	34373977	9273	0.0014
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	2	34377482	34379084	2	-2.478
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	2	34379471	52608232	13182	0.0075
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	2	52608369	52641453	36	0.5768
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	2	52643644	89386048	22853	0.0139
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	2	89386116	91130530	188	0.534
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	2	91137693	146578555	30526	0.0071
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	2	146580874	146594276	25	-2.0434
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	2	146594865	164345098	10582	0.0051
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	2	164351734	164353372	5	-1.1828
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	2	164354888	242738129	48460	6e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	3	35345	46806841	33233	0.0076
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	3	46806965	46806980	2	-2.315
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	3	46807015	60532892	8089	0.0035
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	3	60533670	60540171	4	-1.2038
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	3	60540185	68828854	6469	-0.0075
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	3	68828949	68830103	14	-1.4703
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	3	68831448	75651239	4930	-0.0014
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	3	75655239	75669495	6	-1.8242
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	3	75677871	96938796	9140	0.0055
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	3	96949570	96950800	2	-3.4432
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	3	96951370	96982645	19	-0.0256
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	3	96983128	96989317	3	-1.6292
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	3	96991354	100420474	1831	0.0098
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	3	100427148	100431746	27	-0.5678
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	3	100431759	101808995	759	-0.005
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	3	101822758	101925199	59	1.034
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	3	101929306	104992935	1758	0.0129
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	3	104996289	104999021	3	-1.5427
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	3	105007668	194360739	55720	0.0097
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	3	194360889	194365597	17	-1.3727
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	3	194369129	199380515	2702	0.0321
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	4	2281	33058	30	0.1927
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	4	33109	111562	65	0.6483
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	4	124837	9823258	5691	0.0087
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	4	9832514	9844264	33	-0.9389
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	4	9844280	34462895	16972	-5e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	4	34463350	34506308	39	0.5625
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	4	34506323	63350429	16017	0.0086
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	4	63352531	63354257	8	-2.0429
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	4	63362225	64376535	556	0.0322
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	4	64380064	64404811	33	0.4741
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	4	64405135	68943659	2855	0.0059
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	4	68964800	68970737	5	-1.453
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	4	68977394	69054598	12	-0.2376
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	4	69057536	69168574	64	-1.9097
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	4	69171930	70424305	497	0.0362
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	4	70424450	70425368	2	-2.4992
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	4	70426477	157176082	52156	0.0037
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	4	157187425	157197078	18	-0.7909
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	4	157201497	190426037	21890	0.0125
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	4	190432112	190436258	4	-2.3301
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	4	190436765	191261904	386	0.0266
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	5	68532	738748	308	0.0414
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	5	751371	877448	55	0.5164
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	5	878307	7222476	5377	-0.0044
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	5	7230338	7242925	26	-0.9673
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	5	7255635	57364872	30099	0.0093
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	5	57365287	57369290	28	-0.7464
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	5	57374114	178040428	75539	0.006
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	5	178042581	178045769	3	-2.5534
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	5	178051461	180311316	1360	0.023
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	5	180311494	180339574	10	0.973
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	5	180339836	180722926	179	0.0848
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	6	94661	197145	96	-0.0285
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	6	197772	300536	79	0.3865
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	6	301115	32798005	22861	0.0054
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	6	32798775	32798808	3	1.6643
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	6	32798923	54039026	13678	0.0049
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	6	54039043	54039814	8	-1.3306
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	6	54043307	65393663	4351	0.0103
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	6	65404265	65407497	3	-2.9103
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	6	65407534	72919646	5063	0.0149
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	6	72923245	72923593	2	-2.3796
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	6	72925284	74648586	1086	-0.0094
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	6	74648953	74654017	8	0.7938
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	6	74654069	103841522	18350	0.0137
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	6	103844669	103868754	46	0.831
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	6	103872163	104907060	661	0.0264
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	6	104907961	104913144	5	-1.0285
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	6	104913233	105015708	67	0.0035
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	6	105015806	105036304	20	0.7864
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	6	105050116	162875221	37730	-5e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	6	162875562	162935651	44	0.3669
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	6	162935709	170892930	5656	-0.006
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	7	52911	5761458	2992	0.0135
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	7	5761552	6005655	96	0.3082
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	7	6008759	9497604	2582	0.0148
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	7	9501930	9509058	13	-1.5034
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	7	9512802	51573434	30710	0.0095
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	7	51579525	51581181	3	-1.862
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	7	51581327	54353999	2122	0.0021
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	7	54354003	54354011	5	-2.3154
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	7	54360982	109221013	28774	0.0173
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	7	109221021	109228480	27	0.3919
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	7	109228865	109240998	6	1.359
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	7	109241039	109241465	6	0.4932
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	7	109241507	142154515	20465	0.0085
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	7	142156294	142165914	29	0.6371
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	7	142176424	158776345	10521	0.013
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	7	158778642	158819765	47	0.4549
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	8	21254	583041	325	0.0039
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	8	584944	585908	10	0.9602
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	8	591043	2591249	1655	-0.0079
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	8	2591594	2596694	2	-2.0738
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	8	2596882	3948810	1723	-0.0153
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	8	3948876	3949289	6	-1.6241
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	8	3950145	5105923	1747	-0.0029
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	8	5106972	5107885	3	-2.1537
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	8	5107911	8091754	2583	0.0374
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	8	8092670	8109713	3	-1.5574
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	8	8124554	12225652	3233	0.0056
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	8	12233614	12464553	101	0.2722
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	8	12464671	25030439	10425	0.009
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	8	25030494	25040250	24	0.7761
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	8	25047021	39349816	9022	0.0085
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	8	39354760	39506122	59	0.9335
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	8	39507456	40891153	1072	0.0044
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	8	40897009	40897628	2	-2.1808
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	8	40902837	146268959	63833	0.0035
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	9	36587	592903	510	0.109
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	9	596699	596961	4	-2.0281
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	9	597307	2137099	1803	-9e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	9	2138837	2140606	5	-1.2923
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	9	2140662	22482889	17517	0.0104
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	9	22491913	22492699	2	-3.2688
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	9	22499340	41590382	11430	0.0141
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	9	41590614	43156984	56	0.3327
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	9	43159599	43730342	43	-0.4553
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	9	43740182	44569219	50	0.18
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	9	44667855	44764259	30	0.6137
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	9	44767041	78340158	6367	0.0052
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	9	78340482	78350283	13	-1.0092
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	9	78353328	140211215	41977	0.0026
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	10	62759	123665	16	0.2613
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	10	125656	133255	7	-1.3089
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	10	133543	18213969	14856	-0.0012
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	10	18225129	18236775	2	-2.3477
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	10	18239819	47241036	17022	0.0078
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	10	47417400	47468066	4	-1.6159
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	10	47480482	48391956	291	-0.0169
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	10	48457816	48962469	24	0.4678
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	10	48962488	51492405	1447	0.008
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	10	51500366	51573774	6	1.2018
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	10	51580604	56742311	3874	0.0092
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	10	56743537	56745831	2	-3.272
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	10	56745846	66978597	7140	0.005
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	10	66978715	66996190	28	-0.5091
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	10	66996700	135356694	46269	0.0029
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	11	188510	55130764	34627	0.0054
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	11	55130779	55203813	51	0.4873
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	11	55203908	134449982	52369	0.0062
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	12	20703	9525137	6195	0.0243
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	12	9529176	9619559	23	1.2165
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	12	9626236	11118180	1048	0.0261
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	12	11122722	11132799	6	1.0735
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	12	11143141	15579290	3259	0.0115
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	12	15580685	15580830	2	-2.376
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	12	15581218	44186092	17954	0.0141
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	12	44190705	44195804	3	2.4447
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	12	44199559	100118213	34827	0.0051
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	12	100118453	100121860	2	-1.8623
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	12	100124452	128802903	19500	0.0051
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	12	128802982	128803292	2	-2.047
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	12	128803527	132288262	2136	-0.005
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	13	17924949	20392842	1358	0.0424
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	13	20393509	20404422	8	-0.8393
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	13	20407617	36969135	12169	0.0039
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	13	36970036	36986330	17	0.9296
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	13	36986374	80911025	28155	0.0031
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	13	80911075	80955143	29	-1.098
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	13	80956636	114126499	22463	0.004
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	14	18072124	18672674	43	0.3001
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	14	18674114	18947072	24	-0.4586
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	14	18979264	19044849	4	0.8579
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	14	19045977	60125693	26023	0.0076
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	14	60127895	60128889	2	-2.6086
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	14	60135971	105945406	29168	-0.0015
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	14	105950876	105983660	41	-0.5248
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	14	105983675	105989139	9	-1.1519
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	14	105989153	106356482	224	-0.0255
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	15	18276341	18732865	71	0.0629
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	15	18748350	19781841	236	-0.3887
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	15	19786318	19948630	60	-0.9211
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	15	19951021	20088838	54	-0.5499
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	15	20224763	24136706	2396	0.021
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	15	24137138	24137974	2	-3.3683
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	15	24138170	74665417	31493	0.0058
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	15	74678296	74682828	20	1.1586
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	15	74682829	100286563	17659	0.0063
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	16	777	739385	314	0.0154
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	16	771122	771465	2	-2.3356
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	16	771497	31846092	19700	0.02
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	16	31846494	33551523	294	0.3201
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	16	33551793	34317210	210	0.0137
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	16	34324072	34606205	165	0.8417
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	16	34609765	68709028	15386	0.004
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	16	68709061	68755268	12	-0.6712
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	16	68755831	69470111	319	0.0032
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	16	69471152	69472111	2	-1.7613
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	16	69474217	72954559	2188	0.0048
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	16	72955488	72964880	6	-1.0742
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	16	73009537	76929109	3209	0.0019
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	16	76929941	76942239	16	-2.3029
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	16	76942266	76982814	73	0.0059
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	16	76983291	76983569	3	-1.6058
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	16	76983577	79765704	3171	0.0206
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	16	79766323	79767016	3	-2.3316
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	16	79767216	88815036	7369	0.0064
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	17	526	18296117	11426	0.0221
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	17	18299671	18405946	28	0.8177
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	17	18409922	29831026	5865	0.0087
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	17	29832410	29832949	3	-2.1027
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	17	29834076	31931541	1142	0.0126
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	17	31932755	31935860	5	-1.1379
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	17	31935992	36675234	2478	0.0205
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	17	36676540	36684057	24	2.1575
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	17	36686250	41518916	2507	0.0058
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	17	41521621	41718140	123	0.3982
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	17	41719947	42107479	49	-0.3877
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	17	42120174	53042488	7005	0.0048
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	17	53043332	53043992	2	-1.781
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	17	53046992	78643088	14585	0.006
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	18	1543	38305676	24031	0.0067
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	18	38310567	38316315	29	-0.5876
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	18	38319211	76116029	26681	0.0065
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	19	41910	40541333	16798	0.0209
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	19	40547193	40553619	20	-0.5695
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	19	40553688	46044479	2797	0.0126
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	19	46044497	46072786	33	-0.6226
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	19	46083995	59989695	7340	0.0309
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	19	59990392	60070476	43	-0.8724
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	19	60070511	60969862	432	0.0197
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	19	60973882	60978105	6	1.1267
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	19	60980753	63789666	1849	0.0177
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	20	9305	1507814	1194	0.0139
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	20	1507967	1538534	50	0.3516
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	20	1541849	1756578	197	0.0333
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	20	1758750	1762099	3	-1.0353
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	20	1763062	23376458	16801	0.0082
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	20	23378230	23378519	2	-2.2664
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	20	23379555	62426597	24192	0.0052
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	21	9758742	46921385	24373	0.0093
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	22	14432528	17004771	1189	0.0208
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	22	17006129	17009153	8	-1.4977
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	22	17010060	17052885	16	0.1054
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	22	17053357	17190110	11	0.8987
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	22	17256428	21592981	2691	0.0334
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	22	21593242	21593257	2	-2.6115
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	22	21593274	49581321	19601	0.0085
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	X	108477	2947748	254	0.0313
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	X	2951966	2952034	2	-5.619
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	X	2952811	21895385	12687	-0.004
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	X	21895657	21895885	2	-5.0163
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	X	21895945	154835548	71146	0.007
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	Y	2710438	20746799	6793	-1.0255
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	Y	20772121	20924356	4	-2.4855
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	Y	20925094	23570347	850	-1.0478
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	Y	23585126	26833326	754	-0.5033
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	Y	26847504	27079703	120	-0.1338
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	Y	27082899	27100125	9	-1.3588
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	Y	27105003	27191185	46	-0.8401
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E03_895682	Y	27191317	57427647	8	-1.2296
