Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	1	3218610	120521760	67774	0.0771
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	1	120522601	225694761	47300	0.4545
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	1	225694775	247813706	14030	0.0666
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	2	484222	157624038	82497	0.0665
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	2	157625885	157627720	2	-1.6597
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	2	157634391	175208185	10571	0.0768
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	2	175210850	175212088	2	-1.7645
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	2	175218723	242476062	38168	0.0727
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	3	2212571	41107229	23284	0.4652
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	3	41111939	191514270	80706	0.0704
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	3	191569634	197538677	2351	0.4142
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	4	1053934	53738411	28699	0.0699
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	4	53738516	53738524	2	-2.3648
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	4	53739262	188763651	73993	0.08
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	5	914233	53041327	27645	0.0545
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	5	53044827	54004843	676	-0.5283
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	5	54007311	54035460	30	0.1033
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	5	54038438	54061132	23	0.5386
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	5	54062123	54426248	231	0.07
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	5	54428310	54938579	239	0.4898
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	5	54939071	55371035	227	0.099
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	5	55381015	58012601	1807	-0.4917
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	5	58020021	62514628	2695	0.0721
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	5	62520889	63644375	248	-0.4788
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	5	63644751	65045730	750	0.0842
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	5	65045979	66164140	783	0.4716
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	5	66166614	68473800	1577	0.0785
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	5	68475068	68740653	105	0.482
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	5	70661208	77692617	4348	-0.5092
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	5	77692801	78602863	544	0.108
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	5	78606392	79009828	197	0.5223
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	5	79010323	80919867	1164	0.0914
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	5	80922546	81025395	56	-0.6525
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	5	81037916	85353644	2303	0.0789
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	5	85358202	85421521	39	-0.4736
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	5	85421790	85955095	287	0.0293
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	5	85958981	86734901	414	-0.5101
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	5	86736566	86998822	106	0.0667
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	5	87003678	87368303	198	0.4375
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	5	87369036	91861156	2250	-0.497
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	5	91866491	94442322	1309	0.4889
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	5	94446289	94978214	286	0.0575
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	5	94980799	96766342	1094	0.4624
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	5	96769237	98483320	850	0.0951
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	5	99563090	106721137	3300	-0.4876
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	5	106723052	107170088	401	0.4603
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	5	107172245	141776902	20058	-0.4955
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	5	141777986	141781818	2	-2.6803
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	5	141781867	180360469	24168	-0.5069
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	6	1014281	54702643	32495	0.4623
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	6	54702855	81410000	11849	0.0521
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	6	81414063	83120728	935	0.374
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	6	83124421	170903919	51115	-0.5009
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	7	705284	158385118	81294	0.0756
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	8	617667	12585436	5084	0.0167
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	8	12585730	12676702	72	-0.5178
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	8	12678315	73431917	34472	0.0533
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	8	73432560	73479723	34	-0.297
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	8	73479960	114290091	22545	0.1005
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	8	114295231	114296496	2	-1.5539
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	8	114298409	128603440	9223	0.1085
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	8	128603606	145232496	10074	0.4631
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	9	789932	75280611	26384	-0.5
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	9	75284988	75285069	2	-2.6764
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	9	75285903	133482762	37870	-0.4989
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	9	133483217	133484209	2	-2.6915
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	9	133484725	140938752	3688	-0.5056
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	10	415240	450613	26	0.1094
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	10	454162	593419	29	-0.5584
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	10	645916	135225087	80791	0.0736
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	11	456120	63996938	34718	0.0782
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	11	63997494	64081006	18	-0.4071
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	11	64089874	80800200	8273	0.0791
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	11	80802435	82406633	933	-0.4935
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	11	82411471	83846493	854	0.0817
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	11	83847610	134142530	32384	-0.4963
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	12	889902	33521107	19554	0.0835
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	12	39223566	49163285	5531	-0.483
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	12	49166266	49816508	244	0.0709
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	12	49820097	49852840	14	0.4268
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	12	49855433	50115024	91	0.0984
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	12	50118545	63504720	7573	-0.4737
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	12	63505217	71730804	5251	0.0936
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	12	71866185	82446101	6389	-0.4818
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	12	82446348	82446605	4	-2.0123
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	12	82446647	132376342	29085	-0.4902
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	12	132376974	132377083	4	0.6012
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	12	132382001	133161346	116	-0.4808
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	13	19450806	55806533	21661	0.079
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	13	55807687	55892567	46	0.4509
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	13	55898510	114987458	34900	0.0699
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	14	20501368	105988038	49437	0.0878
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	15	23687685	56156918	17343	0.0751
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	15	56159776	56344631	104	-0.6736
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	15	56344794	101884307	27058	0.0686
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	16	653459	63264397	24676	0.0603
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	16	63264699	63284050	15	-0.6664
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	16	63291370	89379936	16090	0.06
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	17	987221	21305392	9629	-0.5002
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	17	25270517	57745534	15613	0.0844
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	17	57751222	57752723	3	1.7118
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	17	57752778	80917016	11722	0.1095
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	18	329586	43102285	22915	0.0677
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	18	43102347	50668321	5169	0.4446
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	18	50673594	52713747	1124	0.0426
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	18	52715732	65603769	7857	0.4566
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	18	65791455	77109240	5572	0.0575
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	19	284018	8906101	2624	0.0988
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	19	8906286	10356432	768	0.4543
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	19	10368158	30013350	7006	0.086
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	19	30014619	31028795	692	0.4069
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	19	31030541	31081730	51	0.1048
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	19	31086284	31158608	45	0.476
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	19	31158809	31269001	65	0.0406
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	19	31271930	32258354	689	0.3771
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	19	32259123	33061120	583	0.0257
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	19	33065265	41435630	4360	-0.4656
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	19	41435736	41436546	2	-2.4616
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	19	41437958	58878226	7052	-0.4705
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	20	455764	62219837	37270	0.0625
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	21	15347621	47678774	20573	0.0537
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	22	17423930	49331012	16923	0.08
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	X	3157107	97878145	37607	0.0042
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	X	97878335	97882609	3	-3.0635
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	X	97883266	105278409	3510	0.0032
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	X	105278765	105279056	2	2.6704
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	X	105282152	115867833	4871	0.0171
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	X	115868309	115868354	2	-5.069
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_E12_895776	X	115869383	154905589	17694	0.0018
