Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	1	51598	16983883	8820	-0.0257
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	1	16984146	17130530	54	-0.517
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	1	17130726	25455928	5290	-0.0248
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	1	25465715	25534799	31	0.5489
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	1	25535897	34864261	4969	-0.0212
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	1	34875241	34888129	22	-0.6509
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	1	34889148	104027091	43929	-0.0094
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	1	104041212	104104926	14	0.5287
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	1	104105024	105803685	916	2e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	1	105814277	105823898	19	-0.6455
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	1	105825578	110029038	2669	1e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	1	110034497	110044476	18	-0.8346
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	1	110046521	112491849	1957	-0.0061
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	1	112497488	112498736	22	0.4562
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	1	112498764	143553915	5249	-0.0065
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	1	143560896	143560909	3	1.4958
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	1	143576984	150822151	2792	-0.0304
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	1	150822330	150853164	33	1.101
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	1	150853200	166031459	10432	-0.0501
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	1	166032807	166033543	4	-1.2671
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	1	166035137	173063028	4644	-0.0476
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	1	173063179	173064071	9	-1.038
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	1	173064128	173068463	7	-0.5328
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	1	173068477	220433291	32189	-0.0517
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	1	220441457	220443627	2	-2.651
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	1	220448757	247191011	18516	-0.0453
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	2	2784	4194344	2996	0.0717
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	2	4194780	4201600	34	-0.6567
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	2	4201708	34373977	20989	0.0668
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	2	34377482	34379084	2	-1.8103
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	2	34379471	34544573	95	0.058
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	2	34552819	34590561	46	0.6473
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	2	34590667	36902791	1869	0.0952
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	2	36903067	47487951	7725	-0.2515
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	2	47489840	52607972	3454	0.0761
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	2	52607984	52608385	6	-1.4757
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	2	52612257	52635046	33	-0.2975
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	2	52641453	242738129	112788	0.0465
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	3	35345	6621543	5847	0.0367
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	3	6626128	6628244	22	-0.9283
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	3	6628332	100420474	57969	0.0324
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	3	100427148	100431272	19	0.5615
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	3	100431303	131246388	18767	0.0511
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	3	131249276	131288742	50	0.5471
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	3	131288926	163995786	20281	0.0444
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	3	163995843	164098609	61	-0.5221
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	3	164106536	175025929	6584	0.0431
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	3	175026103	175030326	3	-1.3114
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	3	175033307	194360596	12612	0.0447
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	3	194360656	194363167	7	1.2612
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	3	194363281	196766953	1498	0.0439
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	3	196767187	196960434	48	-0.3271
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	3	196964365	199380515	1173	0.0301
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	4	2281	9046106	5242	-0.0597
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	4	9046107	9066075	8	-0.3653
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	4	9070328	9088443	9	0.753
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	4	9095185	9819488	545	-0.0496
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	4	9823258	9840596	29	2.2886
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	4	9843312	9999813	178	-0.013
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	4	10001452	10009766	16	-0.6158
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	4	10011816	34455449	16807	-0.0439
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	4	34462895	34482620	23	-0.6451
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	4	34482635	68902978	19489	-0.0346
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	4	68909443	69168574	88	0.3962
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	4	69171930	69485755	14	-0.8279
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	4	69512426	172605921	62482	-0.0256
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	4	172611459	172614019	8	1.0595
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	4	172614033	173224503	399	-0.0263
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	4	173225723	173226108	12	0.7186
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	4	173232554	187609258	9737	-0.027
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	4	187609569	187611584	6	-1.0842
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	4	187614149	189458252	1203	-0.0341
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	4	189458354	189458369	2	1.6681
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	4	189458418	191261904	1179	-0.0027
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	5	68532	23315251	16792	-0.0024
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	5	23323879	23327492	22	0.8241
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	5	23327600	46287063	13989	-0.0031
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	5	46306765	46309259	8	1.0267
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	5	46313969	57368088	5106	0.0147
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	5	57368154	57369290	9	-0.7627
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	5	57374114	68882059	7303	0.0094
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	5	68903050	69153891	5	-1.1698
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	5	69269183	70290662	12	0.0283
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	5	70342415	70426941	7	0.8388
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	5	70427009	110444585	23698	0.0075
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	5	110444759	110471180	31	0.4904
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	5	110482855	180722926	46125	0.0055
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	6	94661	225399	115	0.0375
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	6	230695	326149	87	-0.2837
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	6	327559	3361605	2485	0.051
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	6	3361665	3378194	10	-0.7991
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	6	3378317	18897943	11896	0.049
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	6	18899410	18899695	2	-1.3804
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	6	18899702	29945051	7156	0.0478
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	6	29945166	29982621	22	0.9819
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	6	29982688	31394255	669	0.0847
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	6	31394284	31403932	7	-1.7019
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	6	31403966	34240586	1517	0.0634
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	6	34242498	34242695	2	-1.9319
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	6	34242842	65393663	17168	0.0287
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	6	65404265	65405713	2	-2.596
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	6	65407497	74648586	6165	0.0287
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	6	74648953	74654069	9	0.9044
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	6	74658138	77493251	1766	0.0277
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	6	77496587	77509165	17	0.5849
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	6	77509360	80069828	1653	0.0243
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	6	80071283	80078353	12	0.8482
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	6	80080364	81034459	652	0.0338
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	6	81034515	81034823	2	-2.3145
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	6	81035107	170892930	58543	-0.0191
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	7	52911	8716655	5029	0.2738
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	7	8717126	8719614	7	-0.5127
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	7	8722256	13097449	3490	0.2927
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	7	13097589	13097603	2	-1.2879
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	7	13097739	22401305	7578	0.2923
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	7	22401997	22403012	2	-3.1355
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	7	22405279	38295248	11370	0.2703
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	7	38295265	38298084	23	-0.1216
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	7	38298253	54347867	11079	0.2609
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	7	54353999	54354011	6	-1.7796
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	7	54360982	70058374	6299	0.2594
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	7	70061186	70064077	2	-2.8574
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	7	70066179	91046078	12003	0.2993
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	7	91056820	91057068	3	-1.2188
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	7	91062968	117497515	15601	0.2959
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	7	117498581	117520868	23	0.8784
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	7	117521476	125832792	4949	0.3044
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	7	125832887	125834113	12	1.081
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	7	125834114	133435717	4706	0.2972
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	7	133435735	133446174	26	-1.825
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	7	133446205	141743187	5478	0.3184
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	7	141744987	141745628	2	-1.3532
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	7	141746087	142154515	224	0.2975
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	7	142156294	142165614	27	0.9663
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	7	142165684	154024104	7330	0.3003
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	7	154027040	154030546	3	1.7059
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	7	154031763	155156790	918	0.3169
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	7	155158624	155159699	2	-1.003
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	7	155162397	158819765	2325	0.293
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	8	21254	7903212	8028	0.0462
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	8	7903274	8015597	23	0.614
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	8	8027373	13579983	4337	0.0534
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	8	13580079	13580391	2	-1.6084
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	8	13580393	13848969	323	0.0521
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	8	13849377	13852040	2	-2.0192
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	8	13852258	15445295	1438	0.0476
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	8	15445549	15457818	10	-0.7142
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	8	15467641	39349816	16744	0.0384
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	8	39354760	39503281	55	0.7813
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	8	39503857	39949857	272	0.0281
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	8	39950114	39950804	3	-3.2833
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	8	39953976	111888670	41516	0.0401
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	8	111893724	111894303	2	-1.8692
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	8	111894361	112363470	252	0.0713
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	8	112363642	112364257	4	1.2061
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	8	112364378	144770300	22419	0.0474
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	8	144776300	144778951	9	-0.7058
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	8	144790132	146268959	506	0.042
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	9	36587	32717150	27342	-0.2515
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	9	32725962	32727092	4	0.6836
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	9	32728072	39295344	3898	-0.1462
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	9	39300907	39304120	4	-1.2411
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	9	39305036	44409324	199	-0.1872
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	9	44569219	44748482	29	0.3101
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	9	44760537	46278026	89	-0.1199
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	9	46278193	65370766	17	-0.789
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	9	65412427	105606318	25141	-0.2662
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	9	105608517	105609111	2	-2.381
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	9	105610523	140211215	23154	-0.271
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	10	62759	1007774	539	-0.0192
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	10	1007914	1022171	8	-0.9373
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	10	1022568	3128673	1996	-0.0446
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	10	3130461	3130540	2	-1.8201
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	10	3131086	17967560	12336	-0.0649
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	10	17978214	17989863	2	-2.3985
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	10	18011822	24417681	4362	-0.0629
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	10	24417682	24418060	9	-2.1874
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	10	24418914	46374540	12339	-0.0652
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	10	46374544	47174643	350	0.423
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	10	47209270	56742311	5653	-0.044
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	10	56743537	56745831	2	-2.018
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	10	56745846	124334099	45567	-0.0588
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	10	124334213	124341003	5	-1.3592
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	10	124346802	135356694	7922	-0.0648
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	11	188510	101099594	63376	-0.0868
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	11	101103070	101103174	4	1.4383
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	11	101103422	106024419	3339	-0.0801
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	11	106026060	106026860	2	-1.9322
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	11	106029353	134449982	20433	-0.0959
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	12	20703	736231	418	0.0971
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	12	739370	746507	20	-0.6589
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	12	746549	1404810	373	0.0553
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	12	1409531	1411821	2	-1.5777
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	12	1413136	9521823	5391	0.0477
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	12	9525137	9619559	24	-1.4925
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	12	9626236	10464267	632	0.0691
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	12	10470044	10487073	7	-0.6659
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	12	10487987	11106639	402	0.0664
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	12	11108116	11132799	14	0.732
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	12	11143141	33185927	15595	0.0582
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	12	33192673	33198641	27	-0.5552
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	12	33199627	98319868	39377	0.0555
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	12	98319904	98322851	26	-0.4848
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	12	98322865	132288262	22765	0.0456
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	13	17924949	114126499	64277	-0.2572
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	14	18072124	18759317	48	0.0232
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	14	18763231	19470560	127	-0.3096
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	14	19470635	21462988	1370	0.0243
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	14	21463199	21463439	4	-1.3168
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	14	21463499	40677384	12288	0.0512
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	14	40678108	40739852	17	0.6484
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	14	40746090	73076460	20492	0.0553
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	14	73076604	73099668	9	0.9412
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	14	73100484	105531947	20797	0.0428
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	14	105550720	105550986	2	-1.7361
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	14	105553173	105618359	28	-0.0249
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	14	105618552	105638145	10	1.2877
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	14	105640508	105848388	101	-0.0402
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	14	105854089	105873098	8	1.0118
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	14	105886988	106356482	307	0.038
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	15	18276341	18452025	44	-0.3031
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	15	18452183	20224763	379	0.171
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	15	20232440	21609892	629	-0.2889
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	15	21609913	21609942	2	-1.8878
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	15	21610088	22734707	724	-0.3051
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	15	22736682	28185521	3322	0.0117
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	15	28203223	28609050	107	-0.5772
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	15	28675248	30231347	1053	0.0114
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	15	30248179	30664276	68	-0.4362
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	15	30690275	100286563	45721	0.0061
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	16	777	19851864	13528	0.0405
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	16	19853151	19874863	29	-0.8263
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	16	19877755	33886359	6832	0.0429
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	16	33906476	53789241	6419	-0.2794
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	16	53789369	53837892	53	-0.6808
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	16	53839781	54362909	470	-0.2781
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	16	54363056	54374206	10	-1.3637
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	16	54379470	56070018	1016	-0.2798
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	16	56072199	76929109	13498	0.0283
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	16	76929941	76942266	17	1.097
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	16	76942502	85918894	9368	0.0434
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	16	85919332	85919365	2	-1.4803
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	16	85921879	86667923	419	0.0274
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	16	86671164	86672339	3	-1.3768
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	16	86672892	88815036	847	0.0729
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	17	526	18299671	11443	-0.0297
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	17	18299674	18405946	27	-1.3342
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	17	18409922	36676603	9501	-0.0864
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	17	36676616	36684057	20	1.5865
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	17	36686250	38730107	1100	-0.0438
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	17	38755183	41532920	1421	0.247
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	17	41533271	41707463	106	-0.0736
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	17	41707478	42120174	56	-0.3802
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	17	42139835	68553676	16299	0.3694
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	17	68554068	68685453	88	0.043
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	17	68685741	77997615	4865	0.3648
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	17	78004751	78047098	24	-0.2317
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	17	78054323	78643088	342	0.351
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	18	1543	36514488	22845	0.0476
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	18	36514604	36523810	16	0.5312
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	18	36524070	61868733	17504	0.0532
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	18	61872559	61879320	13	-0.5186
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	18	61883718	62057535	144	0.1174
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	18	62057629	62062856	14	-0.6703
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	18	62063122	76116029	10273	0.069
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	19	41910	4335674	1164	-0.2892
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	19	4340699	40541027	15655	-0.0108
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	19	40541061	40558584	26	-0.4934
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	19	40558626	49572200	4667	-0.018
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	19	49574000	49597745	25	0.4613
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	19	49598364	49599647	6	-0.1697
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	19	49610617	49947875	250	0.4868
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	19	49955667	63789666	7554	-0.0219
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	20	9305	1515454	1209	0.0685
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	20	1515653	1530207	33	0.6684
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	20	1538257	30930195	19663	0.0539
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	20	30937217	30937845	2	-1.656
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	20	30938431	36444199	2913	0.0375
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	20	36444220	36445708	3	-1.3844
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	20	36452066	62426597	18673	0.0646
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	21	9758742	46921385	24410	0.0364
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	22	14432528	17035860	1213	0.2387
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	22	17052885	17161546	8	-0.5982
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	22	17173947	21550094	2669	0.2801
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	22	21551124	21552000	4	-1.0213
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	22	21552121	21592981	26	0.348
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	22	21593242	21593257	2	-1.9267
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	22	21593274	24066676	1598	0.2788
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	22	24066677	24075901	3	-1.4592
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	22	24075916	49581321	18044	0.2818
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	X	108477	2525081	91	-0.3966
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	X	2552338	47756214	29023	0.0037
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	X	47765101	47855671	71	1.0146
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	X	47856008	76266264	10894	-4e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	X	76270041	76440325	18	1.0792
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	X	76461534	146322239	39556	-0.002
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	X	146322769	146323338	2	-4.1714
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	X	146323540	154835548	4834	0.0082
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	Y	2710438	57427647	8585	-1.6033
