Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	1	61735	17111296	8820	-0.0257
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	1	17111559	17257943	54	-0.517
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	1	17258139	25583341	5288	-0.0247
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	1	25593128	25662212	31	0.5489
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	1	25663310	35091674	4969	-0.0212
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	1	35102654	35115542	22	-0.6509
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	1	35116561	104225568	44000	-0.0094
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	1	104239689	104303403	14	0.5287
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	1	104303501	106002162	916	2e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	1	106012754	106022375	19	-0.6455
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	1	106024055	110227515	2669	1e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	1	110232974	110242953	18	-0.8346
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	1	110244998	112690326	1957	-0.0061
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	1	112695965	112697213	22	0.4562
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	1	112697241	144842558	5245	-0.0065
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	1	144849539	144849552	3	1.4958
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	1	144865627	152555527	2793	-0.0302
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	1	152555706	152586540	33	1.101
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	1	152586576	167764835	10431	-0.05
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	1	167766183	167766919	4	-1.2671
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	1	167768513	174796405	4644	-0.0477
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	1	174796556	174797448	9	-1.038
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	1	174797505	174801840	7	-0.5328
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	1	174801854	222366668	32190	-0.0517
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	1	222374834	222377004	2	-2.651
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	1	222382134	249224388	18513	-0.0453
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	2	12784	4216469	2996	0.0717
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	2	4216905	4223725	34	-0.6567
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	2	4223833	34520473	20987	0.0669
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	2	34523978	34525580	2	-1.8103
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	2	34525967	34691069	95	0.058
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	2	34699315	34737057	46	0.6473
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	2	34737163	37049287	1869	0.0952
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	2	37049563	47634447	7723	-0.2516
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	2	47636336	52754468	3455	0.0761
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	2	52754480	52754881	6	-1.4757
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	2	52758753	52781542	33	-0.2975
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	2	52787949	243089456	112779	0.0465
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	3	60345	6646543	5847	0.0367
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	3	6651128	6653244	22	-0.9283
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	3	6653332	98937784	57963	0.0324
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	3	98944458	98948582	19	0.5615
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	3	98948613	129763698	18767	0.0511
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	3	129766586	129806052	50	0.5471
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	3	129806236	162513092	20280	0.0444
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	3	162513149	162615915	61	-0.5221
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	3	162623842	173543235	6585	0.0431
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	3	173543409	173547632	3	-1.3114
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	3	173550613	192877902	12612	0.0447
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	3	192877962	192880473	7	1.2612
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	3	192880587	195285664	1498	0.0439
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	3	195285898	195474763	48	-0.3271
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	3	195478694	197896118	1173	0.0301
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	4	12281	9437008	5242	-0.0597
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	4	9437009	9456977	8	-0.3653
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	4	9461230	9479345	9	0.753
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	4	9486087	10210390	545	-0.0496
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	4	10214160	10231498	29	2.2886
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	4	10234214	10390715	178	-0.013
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	4	10392354	10400668	16	-0.6158
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	4	10402718	34779054	16807	-0.044
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	4	34786500	34806225	23	-0.6451
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	4	34806240	69374955	19518	-0.0344
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	4	69375160	69485979	62	0.4262
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	4	69489335	172369346	62500	-0.0257
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	4	172374884	172377444	8	1.0595
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	4	172377458	172987928	399	-0.0263
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	4	172989148	172989533	12	0.7186
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	4	172995979	187372264	9737	-0.027
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	4	187372575	187374590	6	-1.0842
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	4	187377155	189221258	1203	-0.0341
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	4	189221360	189221375	2	1.6681
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	4	189221424	191027923	1178	-0.0027
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	5	15532	23279494	16793	-0.0025
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	5	23288122	23291735	22	0.8241
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	5	23291843	46251306	13987	-0.0031
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	5	46271008	46273502	8	1.0267
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	5	46278212	57332331	5105	0.0149
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	5	57332397	57333533	9	-0.7627
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	5	57338357	68846303	7303	0.0094
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	5	68867294	69118135	5	-1.1698
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	5	69233427	70254906	13	0.0559
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	5	70306659	70391185	7	0.8388
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	5	70391253	110416686	23700	0.0075
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	5	110416860	110443281	31	0.4904
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	5	110454956	180790320	46125	0.0055
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	6	149661	280399	115	0.0375
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	6	285695	381149	87	-0.2837
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	6	382559	3416606	2485	0.051
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	6	3416666	3433195	10	-0.7991
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	6	3433318	18789964	11895	0.0491
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	6	18791431	18791716	2	-1.3804
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	6	18791723	29837072	7156	0.0478
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	6	29837187	29874642	22	0.9819
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	6	29874709	31286276	669	0.0847
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	6	31286305	31295953	7	-1.7019
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	6	31295987	34132608	1517	0.0634
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	6	34134520	34134717	2	-1.9319
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	6	34134864	65336942	17170	0.0288
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	6	65347544	65348992	2	-2.596
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	6	65350776	74591858	6164	0.0288
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	6	74592225	74597341	9	0.9044
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	6	74601410	77436532	1766	0.0277
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	6	77439868	77452446	17	0.5849
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	6	77452641	80013109	1653	0.0248
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	6	80014564	80021634	12	0.8482
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	6	80023645	80977740	652	0.0338
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	6	80977796	80978104	2	-2.3145
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	6	80978388	171051005	58549	-0.019
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	7	43355	8750130	5027	0.2738
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	7	8750601	8753089	7	-0.5127
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	7	8755731	13130924	3491	0.2925
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	7	13131064	13131078	2	-1.2879
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	7	13131214	22434780	7579	0.2923
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	7	22435472	22436487	2	-3.1355
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	7	22438754	38328723	11368	0.2703
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	7	38328740	38331559	23	-0.1216
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	7	38331728	54380373	11077	0.2609
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	7	54386505	54386517	6	-1.7796
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	7	54393488	70420438	6300	0.2595
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	7	70423250	70426141	2	-2.8574
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	7	70428243	91208142	12005	0.2993
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	7	91218884	91219132	3	-1.2188
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	7	91225032	117710279	15605	0.2958
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	7	117711345	117733632	23	0.8784
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	7	117734240	126045556	4949	0.3042
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	7	126045651	126046877	12	1.081
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	7	126046878	133785177	4707	0.2972
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	7	133785195	133795634	26	-1.825
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	7	133795665	142254328	5583	0.3187
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	7	142254789	142255428	2	-1.3532
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	7	142257232	142474939	119	0.2648
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	7	142476719	142486045	27	0.9663
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	7	142486115	154393171	7329	0.3001
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	7	154396107	154399613	3	1.7059
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	7	154400830	155464029	918	0.3169
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	7	155465863	155466938	2	-1.003
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	7	155469636	159127004	2325	0.293
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	8	31254	7865802	8029	0.0462
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	8	7865864	7978187	23	0.614
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	8	7989963	13535612	4336	0.0533
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	8	13535708	13536020	2	-1.6084
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	8	13536022	13804598	323	0.0521
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	8	13805006	13807669	2	-2.0192
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	8	13807887	15400924	1438	0.0476
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	8	15401178	15413447	10	-0.7142
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	8	15423270	39230659	16745	0.0384
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	8	39235603	39384124	55	0.7813
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	8	39384700	39830700	272	0.0281
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	8	39830957	39831647	3	-3.2833
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	8	39834819	111819494	41520	0.0402
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	8	111824548	111825127	2	-1.8692
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	8	111825185	112294294	252	0.0713
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	8	112294466	112295081	4	1.2061
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	8	112295202	144699157	22421	0.0473
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	8	144705157	144707808	9	-0.7058
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	8	144718989	146298155	506	0.042
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	9	46587	39305344	31252	-0.2382
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	9	39310907	39314120	4	-1.2411
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	9	39315036	44469328	199	-0.1872
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	9	44629223	44808486	29	0.3101
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	9	44820541	46388030	89	-0.1199
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	9	46388197	65630946	17	-0.789
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	9	65672607	106566497	25144	-0.2661
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	9	106568696	106569290	2	-2.381
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	9	106570702	141091394	23158	-0.271
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	10	72759	1017774	539	-0.0192
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	10	1017914	1032171	8	-0.9373
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	10	1032568	3138673	1996	-0.0446
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	10	3140461	3140540	2	-1.8201
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	10	3141086	17927554	12336	-0.0649
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	10	17938208	17949857	2	-2.3985
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	10	17971816	24377675	4361	-0.0628
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	10	24377676	24378054	9	-2.1874
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	10	24378908	46954534	12339	-0.0652
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	10	46954538	47704637	350	0.423
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	10	47739264	57072305	5653	-0.0438
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	10	57073531	57075825	2	-2.018
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	10	57075840	124344109	45565	-0.0587
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	10	124344223	124351013	5	-1.3592
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	10	124356812	135506704	7922	-0.0648
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	11	198510	101594384	63369	-0.0868
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	11	101597860	101597964	4	1.4383
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	11	101598212	106519209	3338	-0.0802
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	11	106520850	106521650	2	-1.9322
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	11	106524143	134262768	19874	-0.0961
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	11	134264155	134266795	2	-1.6294
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	11	134267108	134944770	554	-0.0829
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	12	150442	865970	418	0.0971
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	12	869109	876246	20	-0.6589
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	12	876288	1534549	373	0.0553
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	12	1539270	1541560	2	-1.5777
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	12	1542875	9630556	5390	0.0478
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	12	9633870	9728292	25	-1.4489
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	12	9734969	10573000	632	0.0691
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	12	10578777	10595806	7	-0.6659
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	12	10596720	11215372	401	0.0666
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	12	11216849	11241532	14	0.732
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	12	11251874	33294660	15592	0.0583
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	12	33301406	33307374	27	-0.5552
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	12	33308360	99795737	39375	0.0554
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	12	99795773	99798720	26	-0.4848
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	12	99798734	133778189	22763	0.0456
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	13	19026949	115108397	64273	-0.2572
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	14	19002124	19689317	48	0.0232
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	14	19693231	20400720	127	-0.3096
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	14	20400795	22393148	1370	0.0243
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	14	22393359	22393599	4	-1.3168
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	14	22393659	41607634	12286	0.0512
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	14	41608358	41670102	17	0.6484
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	14	41676340	74006707	20490	0.0553
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	14	74006851	74029915	9	0.9412
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	14	74030731	106460902	20798	0.0428
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	14	106479675	106479941	2	-1.7361
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	14	106482128	106547314	28	-0.0249
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	14	106547507	106567100	10	1.2877
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	14	106569463	106777343	101	-0.0402
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	14	106783044	106802053	8	1.0118
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	14	106815943	107285437	307	0.038
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	15	20016328	20192011	44	-0.3031
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	15	20192169	22673399	379	0.1669
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	15	22681076	25183614	1355	-0.2999
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	15	25185589	30398229	3323	0.0118
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	15	30415931	30821758	107	-0.5772
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	15	30887956	32444055	1053	0.0114
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	15	32460887	32876984	68	-0.4362
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	15	32902983	102469040	45717	0.0061
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	16	60777	19944363	13527	0.0405
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	16	19945650	19967362	29	-0.8263
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	16	19970254	33978858	6831	0.0428
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	16	33998975	55231740	6419	-0.2794
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	16	55231868	55280391	53	-0.6808
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	16	55282280	55805408	470	-0.2781
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	16	55805555	55816705	10	-1.3637
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	16	55821969	57512517	1016	-0.2798
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	16	57514698	78371608	13416	0.0284
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	16	78372440	78384765	17	1.097
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	16	78385001	87361393	9368	0.0434
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	16	87361831	87361864	2	-1.4803
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	16	87364378	88110422	419	0.0274
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	16	88113663	88114838	3	-1.3768
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	16	88115391	90287535	850	0.0732
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	17	526	15599207	10053	-0.0226
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	17	15607279	15615121	4	-1.2436
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	17	15632445	18358946	1387	-0.0766
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	17	18358949	18465221	27	-1.3342
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	17	18469197	39423077	9499	-0.0865
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	17	39423090	39430531	20	1.5865
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	17	39432724	41374581	1100	-0.0438
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	17	41399657	44177107	1421	0.247
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	17	44177458	44351686	106	-0.0736
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	17	44351701	44764994	56	-0.3802
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	17	44784652	71042081	16300	0.3693
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	17	71042473	71173858	88	0.043
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	17	71174146	80404326	4865	0.3648
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	17	80411462	80453809	24	-0.2317
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	17	80461034	81049726	342	0.351
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	18	11543	38260490	22844	0.0476
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	18	38260606	38269812	16	0.5312
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	18	38270072	63717753	17502	0.0532
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	18	63721579	63728340	13	-0.5186
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	18	63732738	63906555	144	0.1174
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	18	63906649	63911876	14	-0.6703
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	18	63912142	78015057	10273	0.069
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	19	90910	11419583	4412	-0.0932
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	19	11420101	11424893	2	-1.5169
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	19	11425083	15038939	1717	-0.0078
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	19	15045192	15049299	3	-1.3475
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	19	15051287	19957669	2490	-0.0339
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	19	19958540	19961226	2	-1.626
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	19	19962251	35849187	8192	0.0017
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	19	35849221	35866744	26	-0.4934
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	19	35866786	44880360	4667	-0.018
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	19	44882160	44905905	25	0.4613
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	19	44906524	44907807	6	-0.1697
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	19	44918777	45256035	250	0.4868
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	19	45263827	59097854	7554	-0.0219
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	20	61305	1567454	1209	0.0685
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	20	1567653	1582207	33	0.6684
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	20	1590257	31466534	19666	0.0539
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	20	31473556	31474184	2	-1.656
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	20	31474770	37010785	2913	0.0375
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	20	37010806	37012294	3	-1.3844
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	20	37018652	62956153	18673	0.0646
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	21	10736871	48096957	24409	0.0364
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	22	16052528	18655860	1213	0.2387
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	22	18672885	18781546	8	-0.5982
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	22	18793947	23220094	2669	0.2801
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	22	23221124	23222000	4	-1.0213
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	22	23222121	23262981	26	0.348
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	22	23263242	23263257	2	-1.9267
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	22	23263274	25736676	1598	0.2788
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	22	25736677	25745901	3	-1.4592
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	22	25745916	51234455	18044	0.2817
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	X	168477	2515081	91	-0.3966
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	X	2542338	47871270	29025	0.0038
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	X	47880157	47970727	71	1.0146
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	X	47971064	76349873	10902	-3e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	X	76353650	76523952	18	1.0792
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	X	76545159	146514547	39534	-0.0011
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	X	146515077	146515646	2	-4.1714
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	X	146515848	155182354	4833	0.0086
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	Y	2650438	59018259	8630	-1.6005
