Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	1	3208470	245880329	129013	-0.0331
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	2	474222	36902791	21903	0.0636
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	2	36903067	46035335	5274	-0.2609
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	2	46036132	46037509	2	-1.7333
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	2	46040482	47487951	1044	-0.2632
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	2	47489840	242124735	103000	0.0443
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	3	526235	132392046	71725	0.0338
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	3	132394262	132402363	2	1.5519
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	3	132406524	199023074	34605	0.0415
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	4	1043934	131094890	71902	-0.0348
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	4	131095143	131144538	34	-0.3996
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	4	131145489	187609258	29979	-0.0299
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	4	187609569	187611584	6	-1.0842
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	4	187614149	189836143	762	-0.0226
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	5	967233	23315251	13540	-0.0042
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	5	23323879	23327492	22	0.8241
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	5	23327600	180293075	86881	0.0037
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	6	959281	80069828	43622	0.0346
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	6	80071283	80078353	12	0.8482
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	6	80080364	81911367	971	0.0344
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	6	81913122	82629262	401	-0.2817
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	6	82631229	170745844	51425	-0.0194
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	7	671810	117497515	59810	0.2795
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	7	117498581	117520868	23	0.8784
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	7	117521476	158077879	21463	0.3028
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	8	607667	145304484	81485	0.0399
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	9	779932	140058573	67954	-0.2629
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	10	405240	3128673	1285	-0.0776
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	10	3130461	3130540	2	-1.8201
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	10	3131086	135075077	79545	-0.0636
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	11	446120	39088492	24380	-0.0904
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	11	39088607	39090967	3	-1.5614
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	11	39091341	133647740	52843	-0.0948
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	12	760163	131671419	73903	0.0478
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	13	18348806	114005560	56589	-0.2621
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	14	19571208	105059083	49442	0.0457
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	15	21238778	22734707	650	-0.3047
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	15	22736682	72602968	28463	0.0057
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	15	72606917	72607021	2	-1.7908
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	15	72607321	95991337	13326	-0.0019
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	15	95993164	95994809	2	-1.6852
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	15	95996851	99701830	2054	0.0092
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	16	593460	45065961	13880	0.0316
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	16	45067418	53780708	5747	-0.2775
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	16	53780928	53837892	51	-0.6733
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	16	53839781	56070018	1438	-0.2791
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	16	56072199	87907437	19726	0.0296
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	17	933971	38869972	16919	-0.0728
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	17	38877619	68553676	16154	0.3567
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	17	68554068	68685453	88	0.043
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	17	68685741	77997615	3515	0.3481
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	17	78004751	78047098	24	-0.2317
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	17	78054323	78134238	69	0.3718
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	17	78134259	78152770	12	0.0249
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	17	78153286	78510305	192	0.3537
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	18	319586	75210228	42638	0.0481
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	19	235018	4335674	975	-0.299
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	19	4340699	11280583	2869	-0.0279
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	19	11281101	11285893	2	-1.5169
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	19	11286083	49572200	14381	-0.0137
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	19	49574000	49947875	227	0.4681
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	19	49955667	53223124	1290	-0.0397
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	19	53223142	53223144	2	-1.5327
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	19	53223188	63570038	4189	-0.0308
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	20	403764	30930195	17602	0.0476
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	20	30937217	30937845	2	-1.656
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	20	30938431	61690281	19663	0.0573
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	21	14269492	46503202	20575	0.0312
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	22	15803930	47717016	16924	0.2767
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	X	3167107	146322239	60531	0.0019
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	X	146322769	146323338	2	-4.1714
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F02_895680	X	146323540	154558783	3137	0.0068
