Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	1	3208470	12756874	5297	-0.875
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	1	13596688	55898324	22736	0.004
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	1	55901692	55901954	2	-1.181
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	1	55906056	86164671	19380	0.011
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	1	86171545	86171617	2	-1.2954
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	1	86171671	106241954	11608	0.0134
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	1	106246733	106263185	10	-0.8783
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	1	106266560	120328884	8653	0.002
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	1	142745296	156781259	4345	0.7955
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	1	156781274	156781517	2	-0.6814
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	1	156781533	245880329	56985	0.8254
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	2	474222	52997066	31090	0.0023
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	2	52999031	53038632	31	0.4525
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	2	53039389	196202994	72733	-0.0017
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	2	196204770	196210445	3	-0.9568
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	2	196210460	242124735	27368	-0.0021
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	3	526235	36902550	20688	0.0172
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	3	36904141	36915745	10	-0.7354
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	3	36923941	44750329	4516	0.0087
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	3	44756298	44763675	6	-0.6738
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	3	44765065	44979567	103	0.0401
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	3	44979754	50926253	2786	-0.8572
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	3	50926486	50935809	8	-0.009
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	3	50935871	61752605	5765	-0.8884
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	3	61753808	199023074	72447	0.0144
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	4	1043934	1219094	101	-0.93
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	4	1222955	1226840	3	-3.2001
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	4	1227014	25513275	15363	-0.8768
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	4	25514993	25519573	2	-3.292
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	4	25520274	37047461	6825	-0.8575
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	4	37050441	42235279	3140	-0.0165
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	4	42238426	47763583	2634	-0.8771
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	4	52393514	189836143	74548	0.0183
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	5	967233	8113479	5105	0.0145
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	5	8114952	8115389	2	-1.4175
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	5	8115672	180293075	95350	0.0108
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	6	959281	18333280	12022	0.8366
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	6	18334680	18347471	17	0.4343
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	6	18347515	29392441	6480	0.8464
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	6	29394649	29431182	24	1.1998
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	6	29434991	57314444	15354	0.8392
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	6	62292492	89341458	14898	-0.8615
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	6	89341730	89343942	3	-5.5539
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	6	89350464	99695805	5462	-0.8738
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	6	99699571	99727752	23	-5.8549
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	6	99729348	99735817	3	-2.8477
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	6	99735951	102162880	1426	-0.8652
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	6	102163163	102163218	2	-2.841
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	6	102163517	103461078	680	-0.8618
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	6	103461114	103462353	3	-3.2632
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	6	103464441	147515921	26014	-0.8774
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	6	147516275	147516456	2	-4.1132
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	6	147517852	161314105	9238	-0.8883
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	6	161314243	161314361	2	-4.1299
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	6	161315307	170745844	4626	-0.9027
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	7	671810	48042753	27629	0.0099
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	7	48045318	48101288	35	-0.7797
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	7	48103265	94267970	20221	0.0063
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	7	94268370	94333680	38	0.4744
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	7	94335868	121520620	13984	0.0082
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	7	121522170	121590933	32	-0.7376
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	7	121592670	158077879	19350	-0.0052
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	8	607667	15036639	6977	0.0061
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	8	15041152	15044483	10	-0.7815
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	8	15049486	145304484	74507	0.0059
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	9	779932	140058573	67989	0.0068
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	10	405240	135075077	80846	0.005
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	11	446120	95008102	51558	0.004
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	11	95011000	95011016	2	-1.3646
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	11	95012627	133647740	25671	-0.0016
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	12	760163	4426707	1979	0.0043
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	12	4426897	4426912	2	-1.5402
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	12	4427858	103166625	56285	0.0039
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	12	103168104	103264409	40	-0.2622
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	12	103265186	118066215	9246	0.0095
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	12	118066727	118072336	2	-1.4341
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	12	118077314	131671419	6357	0.0163
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	13	18348806	114005560	56617	0.5012
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	14	19571208	61810020	23175	0.0153
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	14	61810571	61817375	3	-1.088
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	14	61817417	96425707	21622	-5e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	14	96427169	96429596	7	-0.7097
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	14	96432090	105059083	4635	-0.002
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	15	21238778	51941339	16006	0.0134
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	15	51941709	51942746	2	-1.2737
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	15	51942856	60163262	5575	-2e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	15	60167424	60167887	3	-1.071
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	15	60170025	99701830	22920	0.0043
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	16	593460	19491833	8566	0.0108
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	16	19492694	19495127	3	-1.1504
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	16	19498676	31696304	5282	-0.0096
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	16	31697991	31714435	12	-0.6865
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	16	31714669	31753198	14	0.0473
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	16	31757800	61186211	10358	-0.8526
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	16	61186276	61186276	2	-3.9633
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	16	61186744	69396838	4528	-0.8405
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	16	69403572	69757550	66	0.4098
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	16	69762695	80490366	7520	-0.8818
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	16	80490686	80492138	2	-4.6439
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	16	80494664	80612238	105	-0.9569
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	16	80614870	80617391	3	-4.8821
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	16	80617787	87907437	4282	-0.885
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	17	933971	77933813	36660	-0.0023
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	17	77950286	77954338	2	-1.47
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	17	77954835	78510305	314	0.0137
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	18	319586	74847360	42446	0.0122
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	18	74847669	75210228	196	0.4973
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	19	235018	52277357	19341	-0.0118
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	19	52285134	52304801	10	-0.9095
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	19	52348098	52381834	20	-0.0092
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	19	52383124	52408187	7	-1.0864
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	19	52409455	63570038	4565	-0.0249
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	20	403764	61690281	37270	-9e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	21	14269492	33480102	12240	0.0075
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	21	33481495	33481866	2	1.0202
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	21	33488423	46503202	8334	-0.0089
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	22	15803930	47717016	16922	0.0074
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	X	3167107	80496880	30583	0.0075
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	X	80499805	80525808	18	0.9763
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	X	80531242	93822167	5406	0.0342
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	X	93825580	94107027	148	0.9234
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	X	94111196	131043442	16898	-0.0024
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	X	131044135	131044365	2	-2.9046
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F06_895740	X	131045069	154558783	10384	-0.0075
