Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	1	51598	16878565	8766	-0.0058
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	1	16884037	16885009	10	0.6669
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	1	16885043	25455928	5376	0.0056
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	1	25465715	25519533	27	0.7607
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	1	25519573	72522941	28756	0.001
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	1	72528701	72535958	9	-0.8659
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	1	72541006	105823246	21085	8e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	1	105823275	105823898	7	0.8739
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	1	105825578	110029038	2668	-1e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	1	110034497	110041701	17	-1.4205
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	1	110044476	111178891	840	0.0097
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	1	111179088	111189749	38	-0.8373
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	1	111193590	112491849	1076	-0.005
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	1	112497488	112498899	24	-0.3353
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	1	112498913	143862491	5392	0.004
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	1	143863085	143863375	4	0.8748
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	1	143863407	150822151	2643	0.0283
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	1	150822330	150852862	31	1.047
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	1	150852902	151028547	176	-0.0226
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	1	151028563	151034883	31	0.7816
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	1	151034905	194997658	29535	0.0029
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	1	194998233	194998709	2	-1.7503
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	1	195005246	195079130	90	0.1751
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	1	195079153	195082414	2	1.5221
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	1	195083353	213922617	12713	-0.0013
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	1	213924816	213928728	14	-1.1119
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	1	213932632	223736967	6693	-0.0059
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	1	223739916	223740407	3	-1.1
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	1	223740878	225491924	1079	0.0167
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	1	225492695	225493029	3	-1.328
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	1	225495801	232830428	5276	-0.0029
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	1	232831879	232832039	2	-1.3801
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	1	232832639	246791857	9982	5e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	1	246802698	246861087	31	-0.8016
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	1	246861912	247191011	148	-0.0088
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	2	2784	4181455	2987	-0.01
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	2	4183562	4201894	43	-0.6808
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	2	4207937	34564838	21088	-2e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	2	34564894	34590561	32	-0.3691
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	2	34590667	35821540	877	0.0107
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	2	35829477	35841451	8	1.0041
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	2	35850977	52608385	12167	9e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	2	52612257	52635046	33	-0.3776
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	2	52641453	113870114	33483	-4e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	2	113871080	113881879	6	-1.1196
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	2	113883432	114078485	24	0.1496
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	2	114078884	114097291	3	1.0835
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	2	114100022	146580913	20100	7e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	2	146580927	146583404	21	0.7979
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	2	146594276	184502096	23282	0.001
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	2	184502645	184510686	17	-0.8786
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	2	184516834	195377822	6083	0.0062
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	2	195380460	195401543	13	-1.0812
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	2	195410091	208063200	7565	0.0013
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	2	208063423	208067581	16	-0.9911
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	2	208067721	242738129	22119	1e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	3	35345	65163493	45376	-0.0022
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	3	65164275	65185492	53	-0.771
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	3	65191389	75643831	7371	-0.0027
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	3	75651239	75669495	7	0.7123
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	3	75677871	82838061	4049	0.0077
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	3	82838682	82838867	2	-1.5682
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	3	82841433	84782374	947	0.0071
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	3	84782448	84784826	14	-0.5692
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	3	84784851	100427201	6000	0.0083
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	3	100427237	100432111	35	-0.6405
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	3	100433654	131245549	18743	0.0032
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	3	131246388	131288926	52	-1.3958
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	3	131289614	164011324	20288	0.0037
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	3	164013009	164023184	9	-1.2331
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	3	164028410	164098609	42	0.2965
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	3	164106536	164109297	8	-0.3225
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	3	164111308	164197211	70	0.0589
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	3	164200421	164202256	2	-2.6708
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	3	164208853	194357441	19107	0.0053
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	3	194360596	194365597	20	-1.42
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	3	194369129	199380515	2705	0.0165
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	4	2281	59520	61	0.3274
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	4	59713	9819488	5738	0.0011
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	4	9823258	9840347	28	3.3553
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	4	9840596	9844366	8	0.875
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	4	9845240	10001452	172	-0.0695
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	4	10002252	10009766	15	-2.7811
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	4	10011816	29740359	14023	-0.0016
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	4	29744306	29748810	5	-1.1582
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	4	29752769	34455399	2762	-5e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	4	34455420	34506267	42	0.5469
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	4	34506308	68967186	19477	0.003
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	4	68970733	68970737	3	1.3986
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	4	68977394	69054598	12	-0.129
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	4	69057536	69168574	64	-2.0097
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	4	69171930	125678855	33858	0.0037
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	4	125679801	125682385	3	-1.6807
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	4	125682475	128344807	1685	-0.0033
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	4	128346906	128347831	3	-1.2344
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	4	128350203	138352587	5498	0.0039
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	4	138352940	138353452	2	-1.3526
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	4	138353853	162099591	14733	0.006
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	4	162099647	162103713	12	0.4672
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	4	162103797	172613549	6684	0.0041
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	4	172613832	172613863	3	1.3671
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	4	172614019	173224503	401	-0.0041
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	4	173225723	173226108	12	-2.2529
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	4	173232554	190426037	11732	0.0028
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	4	190432112	190436258	4	-2.5981
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	4	190436765	191261904	386	-0.0576
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	5	68532	775205	316	-0.0275
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	5	775396	814030	14	-0.5293
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	5	814084	13051925	9955	-2e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	5	13058214	13067507	3	-1.495
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	5	13068045	46231871	20490	0.0028
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	5	46235191	46235192	2	-1.6155
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	5	46245056	46306865	15	0.1461
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	5	46307687	46309259	6	1.1335
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	5	46313969	57357403	5083	0.0043
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	5	57361784	57369290	32	1.1387
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	5	57374114	58339911	743	-0.0056
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	5	58340144	58340327	2	-1.2536
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	5	58340462	68865103	6558	0.0027
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	5	68882059	70343300	23	0.6261
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	5	70384949	81454519	6891	-1e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	5	81455034	81463238	3	-2.7381
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	5	81463794	103888272	12636	0.0053
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	5	103888380	103888503	3	-1.7131
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	5	103888948	117414516	9400	0.0016
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	5	117416321	117416984	11	-0.8336
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	5	117432239	120960876	2297	0.0098
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	5	120964132	120964256	2	-1.4982
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	5	120964439	136963075	10059	0.0013
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	5	136968029	136968115	2	-1.3028
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	5	136968456	140198906	1461	0.0041
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	5	140204020	140223940	12	-2.0196
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	5	140232347	164445489	16187	0.0012
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	5	164451748	164458235	4	-1.6091
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	5	164459281	178036292	9302	-9e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	5	178040296	178045769	5	-1.3477
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	5	178051461	180311494	1364	0.0058
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	5	180312809	180350517	16	-0.4184
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	5	180350709	180722926	172	0.031
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	6	94661	198861	99	-0.0165
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	6	199267	225399	16	0.6628
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	6	230695	326149	87	0.3315
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	6	327559	9285861	7210	-0.0076
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	6	9309486	9320213	4	-1.3885
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	6	9365143	29951413	14337	-4e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	6	29952013	29958175	8	-1.1348
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	6	29958253	31385665	672	-0.0155
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	6	31388802	31404430	12	-1.4788
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	6	31417903	32557501	507	-0.0212
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	6	32560779	32734596	67	-0.7703
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	6	32758590	58530601	16163	0.0021
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	6	58534011	58535028	5	-0.9381
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	6	58540533	67094742	3070	0.0106
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	6	67094767	67099913	8	-0.9362
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	6	67099956	69994987	2015	-5e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	6	69995238	69997658	2	-1.1877
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	6	69997676	71530359	953	-0.0089
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	6	71531751	71532023	2	1.1558
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	6	71532076	74648586	2046	0.0022
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	6	74648953	74654069	9	0.88
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	6	74658138	77493251	1767	-0.0016
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	6	77496587	77509408	20	0.6051
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	6	77509476	170892930	60832	0.002
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	7	52911	38353968	27546	0.0016
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	7	38357890	38364572	5	-2.1484
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	7	38367482	47055865	5707	0.0019
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	7	47056597	47058235	3	-1.3312
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	7	47060045	54353999	5298	0.0048
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	7	54354003	54354011	5	0.7548
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	7	54360982	56728994	1572	0.0054
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	7	56729607	56881944	42	0.2703
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	7	56882211	64206287	1525	0.0246
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	7	64231500	64232553	5	-0.9909
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	7	64233133	65245991	384	0.0437
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	7	65246273	65246600	2	-1.4843
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	7	65246636	70058374	2767	0.0146
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	7	70061186	70064077	2	-3.079
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	7	70066179	76560391	2457	0.0148
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	7	76572369	76573614	2	1.8118
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	7	76576556	105124348	17327	0.0055
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	7	105126373	105127283	3	-1.121
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	7	105127670	109221034	2710	0.0072
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	7	109224328	109225008	15	-0.9463
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	7	109225010	109228448	9	0.0447
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	7	109228480	109241146	11	-2.2023
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	7	109241218	125832210	10032	0.0023
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	7	125832718	125834114	15	0.808
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	7	125834115	133426002	4698	0.0027
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	7	133428969	133466031	49	0.2801
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	7	133468521	141409593	5192	0.0042
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	7	141416112	141436652	39	-0.6336
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	7	141436672	142154515	453	-0.0492
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	7	142156294	142165914	29	0.6714
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	7	142176424	142937218	474	0.002
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	7	142937239	143198992	94	-0.4306
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	7	143203099	143562036	278	-0.0489
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	7	143569246	143680312	30	-0.3549
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	7	143681866	157810356	9051	-0.0013
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	7	157821349	157824926	2	1.5944
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	7	157829747	158819765	638	-0.0212
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	8	21254	5586194	6095	-0.0196
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	8	5586204	5586646	3	-1.3677
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	8	5586758	5591415	16	-0.7325
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	8	5591708	5591903	3	-1.759
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	8	5594496	6812946	1593	0.001
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	8	6813086	6825343	17	-0.6075
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	8	6827115	6846816	4	0.3886
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	8	6847072	6998485	80	-0.0679
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	8	7000334	7011977	2	0.7112
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	8	7017400	7225429	37	-0.4772
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	8	7237790	7825372	146	0.553
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	8	7836168	11932654	3295	-0.0078
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	8	11972069	12072406	10	0.6979
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	8	12207108	12260380	8	-0.1224
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	8	12261219	12278669	8	-1.5865
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	8	12278771	12285662	10	-0.0896
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	8	12285876	12487426	84	0.3733
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	8	12517914	115701219	63402	0.003
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	8	115703663	115707526	14	-0.8758
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	8	115707571	115709993	8	-0.2075
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	8	115710084	115710907	13	-0.8233
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	8	115719873	129821356	9802	5e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	8	129824422	129833267	5	-2.2618
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	8	129846636	146268959	11260	-0.0025
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	9	36587	44409324	31457	-0.0018
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	9	44569219	44780914	36	0.507
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	9	44795733	67673801	155	-0.0481
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	9	67675871	67675877	4	2.2553
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	9	67675879	78960218	6741	-5e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	9	78960330	78966168	23	0.6716
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	9	78966184	140211215	41470	-1e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	10	62759	24415269	19230	-0.0041
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	10	24417680	24418914	12	0.8549
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	10	24418957	31286516	5043	0.0024
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	10	31291340	31291688	7	-0.7373
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	10	31291720	37229203	3964	0.0016
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	10	37236011	37236053	2	1.1824
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	10	37236824	44165170	2361	0.0057
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	10	44165514	44168927	6	-0.9699
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	10	44169435	46478874	1016	0.0193
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	10	46478905	46478979	5	-1.0617
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	10	46478994	50867144	1948	0.0049
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	10	50901582	51067077	3	-1.1218
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	10	51119375	53866547	1809	-0.0017
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	10	53866729	53867754	4	-0.9305
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	10	53870438	61028273	5274	0.0036
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	10	61034121	61035270	8	-0.8595
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	10	61035488	66978715	4029	-0.0015
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	10	66978743	66984248	18	0.4579
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	10	66984407	89028321	14483	0.0028
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	10	89036478	89102873	14	-0.6554
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	10	89107280	92452695	2478	-0.0026
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	10	92452804	92453271	3	-1.1593
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	10	92461560	105381715	7536	0.0037
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	10	105382359	105384244	2	-1.7398
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	10	105384286	135356694	21792	-0.0019
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	11	188510	4252332	1804	0.007
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	11	4257932	4315864	18	-0.6082
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	11	4341373	4924693	655	0.0022
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	11	4925086	4932848	30	-1.8507
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	11	4932910	4933468	11	-0.5744
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	11	4933483	5740499	783	6e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	11	5743981	5765914	34	-0.5386
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	11	5766037	6074552	245	-0.0324
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	11	6077223	6078670	2	-1.8102
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	11	6079079	8914546	2050	0.0025
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	11	8914589	8921514	7	-1.7242
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	11	8921926	11805770	2215	0.0132
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	11	11806675	11806736	2	-1.3089
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	11	11806809	18908082	4914	-0.0021
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	11	18908269	18909120	4	-0.8196
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	11	18909138	19778624	822	-0.0138
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	11	19782188	19783505	2	-1.4749
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	11	19783558	34660827	10616	3e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	11	34661592	34664474	7	-0.7549
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	11	34671405	48554998	9203	-6e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	11	48558010	48559252	2	-1.4189
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	11	48562894	51421003	983	0.0069
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	11	54458221	54583389	7	-0.8144
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	11	54584638	55116094	227	0.0059
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	11	55116129	55209110	63	-0.3711
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	11	55209553	55771355	401	-0.0164
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	11	55773069	55773232	2	-1.049
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	11	55773272	58767743	1785	-0.0029
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	11	58771234	58771545	4	-0.9736
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	11	58776537	81181116	12426	0.0029
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	11	81181640	81194806	10	-0.8521
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	11	81200280	134449982	37785	-0.0021
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	12	20703	9521823	6204	-0.0012
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	12	9525137	9604941	22	-1.6785
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	12	9606832	11110690	1044	4e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	12	11111991	11132799	12	0.7681
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	12	11143141	13222605	1548	0.0033
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	12	13225926	13226407	3	-1.2478
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	12	13227634	27537259	9836	0.0062
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	12	27539008	27542629	28	-0.881
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	12	27548428	31160565	2780	-0.0089
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	12	31169298	31298390	91	0.5717
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	12	31301146	31797939	282	0.0236
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	12	31798541	31801175	4	-1.591
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	12	31808487	36273993	1887	0.0101
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	12	36298834	36300285	2	-2.251
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	12	36320625	44190705	4774	0.0011
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	12	44192107	44195804	3	-1.7757
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	12	44199559	132288262	56516	0.0017
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	13	17924949	22530876	2896	0.0096
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	13	22530906	22531515	9	-0.763
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	13	22536195	23528915	771	-0.0148
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	13	23530140	23531050	4	-1.3806
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	13	23533254	23933607	371	-0.0093
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	13	23937590	23937598	3	-1.1705
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	13	23937678	37950811	10217	5e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	13	37955572	37956056	2	1.8363
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	13	37963057	66070780	17478	-0.0034
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	13	66074220	66075784	2	-2.0251
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	13	66076345	71374989	3381	0.0063
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	13	71375556	71378557	4	-2.0397
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	13	71378606	94784167	15479	0.0029
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	13	94785019	94797183	12	-1.2086
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	13	94798750	114126499	13643	-0.001
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	14	18072124	19107146	74	-0.0673
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	14	19170042	19492423	115	0.2186
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	14	19493212	42057255	14510	-0.0022
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	14	42062061	42062184	2	-3.0782
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	14	42065261	105967660	40619	5e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	14	105968436	105989694	43	0.3096
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	14	105993576	106216317	125	-0.0358
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	14	106216609	106255528	33	-0.3676
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	14	106255796	106356482	64	0.0334
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	15	18276341	18841578	105	0.0923
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	15	18846002	18846971	12	-0.5667
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	15	18850041	19864595	217	0.1568
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	15	19874434	19882775	6	-0.6605
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	15	19884565	32507103	7478	0.0029
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	15	32507227	32645302	72	-0.7555
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	15	32649551	48948317	9902	-0.0048
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	15	48953491	48958400	4	-1.1063
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	15	48962490	84309963	22131	-0.0042
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	15	84312898	84322137	7	-1.3837
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	15	84322841	100286563	12105	-0.0092
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	16	777	5547891	2630	0.0139
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	16	5548090	5548152	2	-1.5989
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	16	5548338	12556360	6794	0.0049
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	16	12556479	12556496	2	1.4043
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	16	12557748	20453338	4556	0.0206
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	16	20453353	20455835	5	-0.8826
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	16	20458789	22338871	854	0.0248
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	16	22349475	22523305	16	0.4362
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	16	22533085	31919350	5204	0.0131
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	16	31920231	32496120	91	0.287
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	16	32496122	32496410	7	0.975
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	16	32516775	32783298	50	0.2909
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	16	32785830	33004923	25	-0.0379
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	16	33009105	33539331	91	0.3716
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	16	33550900	34324072	214	0.0342
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	16	34328205	34614572	168	0.4701
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	16	34618468	50968352	3844	9e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	16	50970451	50972192	2	-1.1715
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	16	50974742	54354011	2761	-7e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	16	54354076	54354095	2	-1.6842
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	16	54355723	54361849	4	1.2385
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	16	54362909	54374206	11	-1.0559
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	16	54379470	88815036	25166	0.0014
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	17	526	36676616	20968	0.0024
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	17	36676629	36684057	19	-0.737
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	17	36686250	41507608	2499	0.0208
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	17	41509340	41511900	2	-0.9556
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	17	41513306	41709662	128	-0.2158
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	17	41717786	42107479	51	-0.554
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	17	42120174	74626807	19762	0.0036
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	17	74626982	74627332	3	-1.3009
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	17	74629176	78643088	1843	-0.0059
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	18	1543	22619861	13906	0.003
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	18	22619913	22619939	2	-2.1075
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	18	22620143	24174996	1032	-0.0082
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	18	24177360	24200742	16	-1.2891
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	18	24203620	36514478	7873	-3e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	18	36514488	36519387	14	0.4645
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	18	36522022	49520859	8975	-0.0057
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	18	49521095	49521390	6	0.7688
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	18	49522182	52749049	1935	-0.0016
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	18	52749870	52750118	3	-1.0199
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	18	52751494	61351337	6206	-0.0017
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	18	61351446	61358237	23	0.7133
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	18	61358253	76116029	10797	-0.0068
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	19	41910	10061339	3896	0.0248
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	19	10073986	10076061	3	-1.0203
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	19	10079959	12553001	1177	0.0299
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	19	12558366	12559102	2	-1.6359
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	19	12561523	20538030	3999	0.0186
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	19	20550917	20551698	2	-1.6361
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	19	20556970	40541162	7739	0.0039
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	19	40541333	40553688	22	-0.601
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	19	40558584	47992046	3735	0.0147
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	19	47994349	47997175	2	-1.2376
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	19	48000726	56834164	4375	0.0109
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	19	56834427	56840009	10	-0.6246
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	19	56846717	60004424	2060	0.0229
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	19	60004812	60005629	2	-1.394
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	19	60006099	60974181	468	0.0212
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	19	60974347	60974879	3	-1.1517
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	19	60978105	63789666	1850	0.0158
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	20	9305	1500503	1185	-0.0039
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	20	1505190	1508999	21	-0.7705
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	20	1509580	1545946	42	0.4264
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	20	1546106	25613467	18583	-0.0026
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	20	25614807	25692723	36	0.528
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	20	25702752	25966291	72	0.0247
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	20	26005295	26005387	2	1.1982
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	20	26017758	28042184	113	0.0395
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	20	28050463	28119554	20	-0.6412
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	20	28141554	62426597	22406	-0.0014
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	21	9758742	36150515	16478	0.0034
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	21	36151341	36151594	2	-1.623
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	21	36151666	46921385	7919	-7e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	22	14432528	14586211	23	0.0519
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	22	14602695	14602976	2	-1.2689
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	22	14616187	18853346	2127	0.0211
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	22	18871884	18992706	3	1.0408
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	22	19035775	19795835	698	0.0522
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	22	19872615	20170595	40	0.3554
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	22	20170674	20803918	409	0.018
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	22	20804023	20804613	5	-0.9556
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	22	20811498	37620866	12161	-0.0014
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	22	37625201	37626850	3	0.9296
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	22	37629060	41227226	1956	0.021
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	22	41229384	41280435	24	0.6285
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	22	41285375	49581321	6103	-0.007
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	X	108477	7324619	3615	0.0151
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	X	7326840	7505386	136	-1.0388
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	X	7506168	76270041	36380	0.001
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	X	76278683	76295047	2	-1.9519
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	X	76295049	150043556	42027	0.0054
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	X	150044592	150046117	2	1.6029
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	X	150047213	154835548	2431	-0.0077
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	Y	2710438	6161425	838	-2.8227
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	Y	6167901	6469541	123	-4.1223
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	Y	6470097	7459842	424	-3.2156
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	Y	7460746	10385211	1204	-3.5819
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	Y	10394949	14099670	949	-3.2742
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	Y	14099736	14103917	3	-7.7452
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	Y	14104283	18080874	2078	-3.4126
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	Y	18084284	19301261	578	-3.8376
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	Y	19301619	19484001	94	-4.4171
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	Y	19484450	22289621	1092	-3.4649
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	Y	22292291	24651237	511	-3.8873
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	Y	24654213	24926921	77	-2.9904
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	Y	24935600	25725360	91	-4.3565
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	Y	25776875	25938472	35	-2.6718
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	Y	25944418	25969782	13	-4.2242
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	Y	25970111	26127678	44	-2.9077
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	Y	26129939	26861404	259	-3.9836
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F08_895716	Y	26866725	57427647	176	-2.9462
