Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	1	51598	225533	25	0.1705
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	1	225591	554484	7	1.1749
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	1	593453	16021930	8360	-0.0269
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	1	16022502	16026512	7	0.8631
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	1	16026788	16236527	89	0.0307
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	1	16240720	16246917	4	-2.2258
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	1	16251918	31394014	8670	-0.0112
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	1	31396254	31397976	3	-3.0521
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	1	31399686	54862788	13002	0.0041
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	1	54865879	54866977	2	-2.1716
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	1	54869038	72541086	12718	3e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	1	72541504	72583736	46	-1.6601
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	1	72584492	103960907	20078	0.0027
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	1	103965022	104104926	28	-0.4845
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	1	104105024	104108766	3	0.58
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	1	104108781	104832726	406	0.008
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	1	104837064	104841243	4	0.5317
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	1	104847407	104852537	4	-1.1369
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	1	104856440	110022113	3169	0.0136
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	1	110022262	110034497	18	-0.4555
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	1	110034560	110041701	16	-1.4077
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	1	110044476	112491849	1952	0.0063
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	1	112497488	112507479	26	-2.0249
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	1	112507583	143553915	5239	0.013
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	1	143560896	143560909	3	1.7674
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	1	143576984	143591466	10	0.2957
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	1	143591512	143659050	56	-0.0778
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	1	143659076	143870807	104	0.3251
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	1	143870853	150822330	2622	0.0438
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	1	150822391	150853218	34	-1.4937
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	1	150857118	151026302	171	-0.0288
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	1	151028547	151034983	35	-1.8132
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	1	151035194	151255945	169	-0.0307
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	1	151257684	151262348	2	-1.7347
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	1	151262746	155744644	2326	0.0042
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	1	155745124	155749571	4	-1.1803
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	1	155749897	157133197	1123	0.045
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	1	157135125	157136383	2	1.6806
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	1	157141442	158194422	710	0.0331
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	1	158194683	158195335	2	-1.5628
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	1	158197763	167483561	6998	0.0096
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	1	167500598	167508390	7	-2.4461
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	1	167509025	195005405	18191	0.0088
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	1	195005604	195068695	85	0.458
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	1	195079130	246804070	35735	0.0043
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	1	246815817	246861912	30	-2.7022
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	1	246862475	247191011	147	-0.0288
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	2	2784	4183562	2984	-0.0367
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	2	4191739	4201042	36	-0.5908
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	2	4201387	34538784	21055	-0.0025
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	2	34544573	34599961	57	0.5629
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	2	34602389	52607972	13028	0.0015
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	2	52607984	52635046	39	0.5476
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	2	52641453	54482830	1391	0.011
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	2	54486981	54487748	2	-1.8956
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	2	54488209	57259528	1966	0.0068
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	2	57259565	57260227	5	-0.964
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	2	57260275	67995183	6750	3e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	2	67997076	68004915	7	-1.2881
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	2	68005123	87732825	12065	0.0089
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	2	87736965	87755578	6	-1.3278
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	2	87775756	89365022	662	-0.0157
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	2	89374870	89758669	81	-0.9773
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	2	89758720	89771360	21	-0.3656
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	2	89771420	89912071	68	-0.958
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	2	89938569	137698618	25092	0.0112
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	2	137700117	137700731	5	-1.165
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	2	137701755	146581653	5474	-0.0164
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	2	146581713	146583404	16	0.8337
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	2	146594276	242738129	59082	0.0012
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	3	35345	52997907	35751	0.0051
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	3	52997933	53008188	18	0.5407
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	3	53008580	75631424	16987	-0.0075
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	3	75632408	75678936	14	0.5863
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	3	75691329	75792515	24	-0.2823
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	3	75795517	75879346	27	0.3811
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	3	75879418	100420474	10954	-0.0058
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	3	100427148	100431991	35	-2.3083
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	3	100431998	113303050	7760	0.0056
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	3	113303120	113304179	2	-1.7355
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	3	113304258	127151738	8575	0.0092
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	3	127156073	127158653	3	-2.3755
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	3	127163190	147229538	12426	0.0093
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	3	147233118	147238613	3	-1.8778
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	3	147239118	163995351	10279	8e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	3	163995433	164081554	52	-0.7266
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	3	164081761	170212874	3458	0.0143
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	3	170216096	170221322	2	-2.492
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	3	170222521	184774158	9128	0.0017
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	3	184776648	184777093	2	-1.9721
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	3	184777988	194356398	6599	0.0103
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	3	194357441	194365597	21	-1.3298
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	3	194369129	199380515	2701	0.0144
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	4	2281	52126	54	0.4406
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	4	55677	9837881	5745	-0.009
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	4	9837900	9840596	24	-1.3668
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	4	9843312	9882141	51	-0.0779
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	4	9882625	9886565	14	-0.5537
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	4	9886676	34455370	16917	-0.0032
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	4	34455399	34462895	5	-0.7936
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	4	34463350	34501120	37	-2.719
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	4	34506267	68900647	19458	0.0066
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	4	68900747	69666231	130	0.4359
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	4	69666914	70123687	273	-0.0374
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	4	70124095	70152582	13	0.6247
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	4	70154911	77511300	4325	0.0068
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	4	77511343	77511390	2	-1.9279
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	4	77511825	112526500	21219	0.0074
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	4	112526515	112529063	8	0.8154
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	4	112529083	149376535	22039	0.0106
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	4	149389508	149502378	81	-1.1849
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	4	149505106	172605921	14446	0.0056
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	4	172611459	172614351	12	0.8219
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	4	172616946	179628436	4297	0.0035
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	4	179629339	179629357	3	-1.617
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	4	179633000	182129764	1843	2e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	4	182131839	182135864	2	-1.9953
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	4	182136041	191261904	6374	-0.0054
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	5	68532	738748	307	-0.1111
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	5	751371	876770	53	0.5222
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	5	877066	1974074	595	-0.1312
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	5	1975758	1980293	3	-1.487
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	5	1980353	21412601	14744	-0.0012
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	5	21413596	21413610	2	-2.0228
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	5	21421823	21485033	45	9e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	5	21486957	21488195	5	-1.7521
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	5	21488253	57357343	20110	0.0074
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	5	57357403	57369272	32	-0.8507
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	5	57369290	70290662	7314	0.0051
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	5	70342415	70426941	7	-2.29
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	5	70427009	77564603	4581	0.0069
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	5	77565326	77652915	37	0.6493
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	5	77658209	77868902	151	0.0146
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	5	77869773	77931558	39	0.5261
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	5	77938009	103888272	14716	0.006
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	5	103888380	103888503	3	-1.6213
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	5	103888948	106260430	1415	0.0083
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	5	106260589	106261016	11	0.6175
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	5	106268475	140211908	21810	0.0092
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	5	140211923	140223940	6	-1.0754
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	5	140232347	162046969	14685	0.0079
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	5	162047130	162068049	7	-0.9432
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	5	162068574	171464882	6693	-0.0063
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	5	171464978	171469278	7	-0.8407
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	5	171469575	176012180	3157	-0.0033
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	5	176013701	176050986	27	-0.4142
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	5	176052001	178040428	897	-0.0054
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	5	178042581	178045769	3	-2.8241
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	5	178051461	180307129	1362	0.0129
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	5	180311316	180347071	14	0.8206
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	5	180349813	180722926	175	-0.0251
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	6	94661	12637608	9936	-0.0109
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	6	12638374	12638822	2	-2.3211
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	6	12641285	19148098	4851	0.0041
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	6	19150160	19150797	3	-1.3502
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	6	19152681	29945051	6936	0.0096
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	6	29945166	29945437	4	1.6775
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	6	29945456	32794174	1302	-0.0548
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	6	32796593	32798808	11	1.2947
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	6	32798923	34045977	762	-0.0241
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	6	34046721	34050683	7	-1.2381
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	6	34052564	54039110	12920	0.001
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	6	54039189	54039814	6	-1.6902
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	6	54043307	62171441	2662	0.0238
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	6	62176642	62181321	2	-1.7959
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	6	62264227	65393663	1689	-0.003
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	6	65404265	65405713	2	-2.6622
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	6	65407497	66445882	694	-0.0155
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	6	66450069	66456274	7	0.7933
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	6	66456472	67094767	435	0.0058
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	6	67097634	67099618	6	-2.8598
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	6	67099913	72919646	3926	0.01
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	6	72923245	72923593	2	-1.9858
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	6	72925284	79019608	3863	0.0047
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	6	79025784	79091904	112	-2.8239
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	6	79095953	81341478	1438	0.0156
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	6	81341677	81346253	27	-0.9994
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	6	81351060	95584182	9141	0.0033
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	6	95584702	95644773	42	0.3219
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	6	95649749	103841522	4837	0.003
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	6	103844669	103868754	46	-1.4505
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	6	103872163	126438680	13979	0.0056
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	6	126439076	126439893	2	-1.6252
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	6	126444111	130258203	2321	-0.0015
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	6	130259478	130259810	2	-1.5295
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	6	130262765	132747954	1622	0.0099
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	6	132751050	132754736	5	-1.1218
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	6	132761061	170892930	26256	-0.0074
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	7	52911	163742	33	0.5588
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	7	166359	19030545	13329	-0.0069
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	7	19030652	19071071	63	0.312
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	7	19071590	54347867	25106	0.0097
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	7	54353999	54354011	6	-1.9732
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	7	54360982	54575052	136	-0.0334
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	7	54575122	54575251	2	2.0006
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	7	54578419	61794061	2058	-0.0029
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	7	61794065	61799709	12	-0.7032
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	7	61818545	133396930	41316	0.0033
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	7	133397149	133397808	2	-2.384
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	7	133399537	133456784	68	-0.2855
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	7	133459332	137467272	2781	0.0102
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	7	137467949	137468165	2	1.72
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	7	137474210	141409593	2406	0.0112
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	7	141416112	141428579	17	-0.8567
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	7	141429117	141433319	8	-0.1052
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	7	141433599	141445459	20	-0.908
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	7	141445586	142154515	445	-0.0419
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	7	142156294	142159241	7	-4.0329
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	7	142159298	142165554	19	-1.819
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	7	142165614	143542557	845	-0.026
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	7	143548534	143681866	36	0.5438
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	7	143682164	153294071	5977	0.0018
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	7	153294555	153295770	2	-2.3797
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	7	153296786	157448440	2859	-0.0254
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	7	157448561	157449161	4	-1.8481
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	7	157449224	158819765	843	-0.0494
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	8	21254	2027161	1423	-0.0334
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	8	2027179	2027808	6	-1.5457
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	8	2031770	25030360	20389	-0.0177
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	8	25030393	25040250	26	0.6618
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	8	25047021	47636177	11861	1e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	8	47640282	47666514	13	0.7558
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	8	47667951	112360670	39244	0.0078
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	8	112363455	112364436	9	-1.4887
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	8	112369457	146268959	22908	3e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	9	36587	28034704	23981	0.0063
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	9	28037588	28045603	6	-1.3339
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	9	28045877	31458724	2427	0.0056
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	9	31460198	31460293	2	-2.1162
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	9	31460393	43062773	4918	0.0075
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	9	43074318	44569219	99	0.3396
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	9	44667855	67673801	190	0.024
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	9	67675871	67678367	8	1.3998
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	9	67699736	114803298	32151	0.0015
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	9	114808252	114808602	2	3.3099
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	9	114816929	140211215	16038	-0.0041
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	10	62759	24415269	19222	-0.0094
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	10	24417680	24417688	7	1.313
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	10	24417924	27268445	2006	0.0088
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	10	27268458	27269999	3	-1.5427
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	10	27270681	42005267	7943	0.0024
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	10	42005655	42146434	23	0.4454
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	10	42146718	47417400	2704	0.0149
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	10	47432905	47468066	3	-1.6585
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	10	47480482	47970363	30	0.0429
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	10	47973682	47979997	2	-1.766
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	10	47980194	66976164	12752	0.0036
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	10	66976282	66984452	29	-0.6837
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	10	66992801	135356694	46259	-0.0068
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	11	188510	4195630	1787	-7e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	11	4206589	4292454	26	-0.7415
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	11	4292643	5740499	1486	0.0344
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	11	5743981	5765914	34	-0.6916
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	11	5766037	18897446	9411	0.0048
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	11	18905648	18917754	40	-1.8236
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	11	18917857	55119916	21845	0.0024
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	11	55130608	55196566	47	-0.4206
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	11	55198894	55201870	5	0.4479
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	11	55202521	55209585	7	-0.7677
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	11	55210152	134449982	52363	0.0041
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	12	20703	9521823	6189	0.0112
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	12	9525137	9619559	24	1.0441
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	12	9626236	11716839	1420	0.0108
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	12	11718896	11719205	3	-1.7703
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	12	11719329	13216588	1169	0.0177
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	12	13217535	13226129	10	-0.6712
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	12	13226407	27986030	10185	0.0159
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	12	27986188	27988911	12	-0.9125
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	12	27994727	33185927	3830	0.0041
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	12	33192673	33198214	24	-0.7647
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	12	33198232	132288262	62102	-0.0048
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	13	17924949	22119019	2605	0.01
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	13	22120021	22122210	7	-1.3842
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	13	22122506	23929114	1435	-0.0252
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	13	23933607	23937598	4	-1.5103
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	13	23937678	36969135	9494	0.0022
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	13	36970036	36986374	18	0.9009
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	13	36986387	66764031	18678	0.0074
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	13	66766363	66767856	2	-2.0552
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	13	66768209	71374989	2865	0.002
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	13	71375556	71378557	4	-2.1467
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	13	71378606	114126499	29122	-0.0067
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	14	18072124	19502641	200	0.2837
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	14	19502828	34066465	9582	0.002
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	14	34083742	34107448	22	0.5389
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	14	34107673	40680440	4020	0.0118
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	14	40684870	40723727	11	-0.8199
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	14	40726999	82365564	26585	-7e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	14	82366679	82374425	8	-0.9416
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	14	82374556	85354507	2049	0.0026
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	14	85356065	85381926	15	-1.4556
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	14	85385888	98733600	9435	-0.001
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	14	98734737	98736153	3	-1.8241
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	14	98737440	103919926	2673	0.0014
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	14	103921688	103986148	25	-0.4092
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	14	103986428	105531947	452	-0.0306
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	14	105550720	105550986	2	-2.4726
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	14	105553173	106245617	376	0.0134
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	14	106247258	106250892	8	-0.9843
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	14	106255229	106356482	68	0.0146
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	15	18276341	18728578	71	0.0231
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	15	18732865	18846971	46	0.3728
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	15	18850041	19080173	39	0.0089
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	15	19090388	19566875	150	-0.3774
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	15	19764921	22220838	1121	0.0387
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	15	22225844	22269266	39	-0.7337
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	15	22269689	74678296	32855	-0.0023
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	15	74678566	74682253	13	-2.6355
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	15	74682399	74682830	8	-0.99
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	15	74689234	82331721	4427	0.0043
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	15	82331742	82338281	7	-1.1603
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	15	82338551	95609413	9788	0.0052
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	15	95618796	95633191	11	-0.9194
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	15	95634653	99497288	2863	0.0018
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	15	99497682	99497972	2	-2.1114
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	15	99501021	100286563	558	-0.0445
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	16	777	19851864	13503	-0.013
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	16	19853151	19874863	28	-1.0164
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	16	19877755	54352715	13744	-1e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	16	54353890	54373744	17	-1.2597
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	16	54374147	59106318	2947	0.0069
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	16	59110812	59128720	10	-0.7718
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	16	59131895	68682675	5808	-0.0098
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	16	68694369	68755857	17	0.5111
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	16	68755897	72913181	2499	0.0046
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	16	72913747	72964880	16	0.5346
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	16	73009537	76929109	3208	-0.0048
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	16	76929941	76942239	16	-2.7767
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	16	76942266	87388899	10041	-0.0325
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	16	87390239	87412501	5	-1.6382
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	16	87412581	88815036	576	-0.0964
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	17	526	18260587	11426	-0.0012
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	17	18296117	18322536	13	-2.0372
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	17	18327348	18405946	16	-0.8541
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	17	18409922	31471028	6919	-0.0054
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	17	31471240	31501593	29	0.6069
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	17	31501716	36671898	2544	-0.0132
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	17	36675211	36684057	26	-0.9335
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	17	36686250	41198295	2281	-0.0064
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	17	41199274	41270423	42	-0.3991
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	17	41272972	41718140	306	0.0178
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	17	41719947	42139861	52	0.9925
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	17	42140165	59307844	10074	-0.0015
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	17	59307887	59337940	9	-1.3868
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	17	59342539	78643088	11496	-0.0111
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	18	1543	36514432	22816	0.0043
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	18	36514446	36519387	17	0.785
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	18	36522022	61351337	17111	7e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	18	61351446	61355697	20	0.7673
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	18	61358176	69658238	6169	-0.0037
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	18	69658379	69658554	2	-2.5439
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	18	69658860	75434495	4267	-0.0181
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	18	75434581	75441415	2	-2.2553
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	18	75442715	76116029	348	-0.0767
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	19	41910	41441498	17233	0.0054
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	19	41443555	41539338	27	-0.4149
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	19	41539477	48389173	3465	-7e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	19	48394873	48445350	21	-0.8161
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	19	48448077	58208894	5117	-0.0055
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	19	58210326	58246131	25	0.5578
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	19	58246168	59414087	781	0.0048
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	19	59422014	59433131	17	0.6935
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	19	59445152	60069820	323	0.027
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	19	60070144	60070159	2	-2.7361
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	19	60070261	63789666	2286	-0.0104
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	20	9305	217690	166	-0.0045
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	20	217703	261237	27	0.3936
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	20	261280	1500503	988	2e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	20	1505190	1509667	23	-2.6493
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	20	1515454	1530207	34	-1.4828
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	20	1538257	15249374	10392	0.0073
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	20	15249902	15250049	2	-2.9265
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	20	15250374	62426597	30793	-0.0107
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	21	9758742	13877148	334	0.1084
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	21	13877508	13889850	5	1.3387
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	21	13891136	44846957	22810	-0.0047
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	21	44848001	44848077	2	-1.8209
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	21	44848096	46921385	1225	-0.0223
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	22	14432528	17035860	1211	0.0592
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	22	17052885	17190110	12	0.9428
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	22	17256428	49581321	22284	-0.0226
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	X	108477	51792915	30940	-0.021
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	X	51794347	51795265	2	1.5627
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	X	51837256	88699278	15966	0.0366
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	X	88700630	88703924	2	-1.8854
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	X	88708939	154038350	37447	0.003
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	X	154045576	154054378	4	-1.1041
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	X	154054938	154835548	237	0.0945
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	Y	2710438	3038678	149	-3.2581
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	Y	3045595	6161425	689	-2.6342
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	Y	6167901	6486233	129	-4.1548
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	Y	6486853	7846135	657	-3.2806
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	Y	7846417	10369564	963	-3.6439
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	Y	10384614	13534015	697	-3.2414
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	Y	13535818	13540211	5	-6.3129
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	Y	13541682	14099670	249	-3.2605
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	Y	14099736	14103917	3	-7.7452
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	Y	14104283	18084284	2079	-3.4015
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	Y	18085938	19484001	671	-3.9291
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	Y	19484450	22376767	1113	-3.4557
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	Y	22379175	22782074	92	-4.0587
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	Y	22791357	22915376	68	-3.1765
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	Y	22919906	24651237	330	-3.9638
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	Y	24654213	24803050	30	-2.8207
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	Y	24811102	24840062	18	-4.0895
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	Y	24840296	24919963	26	-2.1865
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	Y	24920187	25684358	92	-4.4212
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	Y	25707759	26127678	94	-3.0157
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	Y	26129939	26861404	259	-4.01
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F10_895718	Y	26866725	57427647	176	-2.9862
