Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	1	51598	16026084	8420	0.0011
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	1	16026123	16027597	9	-1.6048
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	1	16038248	16657977	270	-0.0091
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	1	16658151	17134834	196	-0.2934
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	1	17148828	34875241	10274	-0.0013
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	1	34875257	34888129	21	-0.4326
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	1	34889148	46282940	6339	0.007
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	1	46284862	46286413	2	1.4921
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	1	46292140	72541504	17447	0.0057
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	1	72541524	72583736	45	-1.5789
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	1	72584492	75041872	1506	-1e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	1	75043660	75046454	2	1.2904
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	1	75046575	75823432	422	0.0124
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	1	75827351	75827442	2	-2.374
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	1	75832097	81661044	3852	0.0059
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	1	81661190	81661193	2	1.7245
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	1	81661255	112491849	19915	0.0086
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	1	112497488	112498736	22	-1.8284
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	1	112498764	150822330	8048	0.0059
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	1	150822391	150853164	32	1.0671
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	1	150853200	151026302	173	0.0358
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	1	151028547	151035324	37	0.8596
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	1	151040529	159775499	5279	-4e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	1	159780383	159925282	57	0.6106
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	1	159925404	167483561	6008	0.0026
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	1	167500598	167509025	8	0.7703
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	1	167521501	173063028	3525	0.0013
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	1	173063179	173063956	7	-1.0407
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	1	173064008	192714857	13212	0.0122
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	1	192718034	192721641	2	-1.7097
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	1	192723639	208137685	10370	0.0086
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	1	208148236	208150607	3	1.321
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	1	208153175	241335029	23374	0.0068
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	1	241335582	241347508	6	-1.3098
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	1	241349107	247191011	3754	0.0155
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	2	2784	52607984	37214	0.0099
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	2	52608004	52635046	38	0.5775
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	2	52641453	75719744	14902	0.0085
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	2	75719889	75736164	19	0.501
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	2	75736363	79515598	2555	0.0176
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	2	79518534	79520032	2	1.8889
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	2	79520643	127568491	24636	0.007
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	2	127573516	127574416	3	1.7413
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	2	127575116	131662783	2274	0.0084
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	2	131667012	131667769	2	-1.5663
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	2	131673028	134772954	1922	0.0163
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	2	134773145	134773340	2	1.6821
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	2	134774727	134780870	13	0.1027
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	2	134782946	134784477	4	0.9473
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	2	134784940	146578555	7303	0.0066
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	2	146580874	146583404	24	0.9057
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	2	146594276	179769900	20293	0.0015
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	2	179775437	179787389	3	-2.8911
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	2	179791836	194657928	8721	0.0059
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	2	194658211	194661902	3	1.6707
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	2	194662320	208063200	7967	0.0042
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	2	208063423	208067581	16	-0.6458
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	2	208067721	242432069	21994	-4e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	2	242564139	242683192	112	-0.8255
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	2	242683359	242738129	30	0.1226
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	3	35345	59981640	40743	0.0052
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	3	59982671	59982697	2	1.9834
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	3	59982737	60315492	386	0.0569
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	3	60316012	60401857	94	-0.9801
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	3	60408264	60752972	392	0.0785
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	3	60755680	60756067	4	-1.0684
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	3	60759263	65164275	3770	0.0055
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	3	65164359	65174909	32	-0.7175
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	3	65174911	65181944	10	-0.0836
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	3	65181984	65185492	10	-0.9849
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	3	65191389	68828854	2424	0.0017
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	3	68828949	68830103	14	-1.5621
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	3	68831448	75503860	4876	-2e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	3	75509797	75722197	74	-0.7702
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	3	75728074	100428100	11022	0.0063
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	3	100431091	100431746	11	-0.6183
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	3	100431759	131274038	18778	0.0034
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	3	131274170	131288926	31	-0.4235
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	3	131289614	134507557	2128	-9e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	3	134507572	134507587	2	1.5082
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	3	134507702	142025229	4605	0.0021
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	3	142028391	142029674	2	-3.0541
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	3	142043308	163606060	13268	0.0085
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	3	163620294	163625399	14	-0.7815
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	3	163626942	163699526	59	0.0346
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	3	163699715	163701563	8	0.7842
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	3	163701579	163990886	193	0.0133
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	3	163990962	164019517	20	0.6516
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	3	164022703	164023184	3	1.8149
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	3	164028410	164109297	50	0.5631
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	3	164111308	189077988	15357	0.0053
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	3	189078072	189078407	2	1.622
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	3	189078434	194360596	3833	0.008
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	3	194360656	194361700	6	1.1279
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	3	194363167	199380515	2719	0.0047
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	4	2281	9061021	5250	-0.002
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	4	9066075	9156420	25	-0.479
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	4	9156936	9819488	530	-0.0226
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	4	9823258	9840596	29	-0.9905
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	4	9843312	34455449	17001	0.0091
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	4	34462895	34506267	39	-0.3473
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	4	34506308	43119209	5719	0.0079
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	4	43119687	43119919	3	-2.2291
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	4	43123183	69054598	13779	0.0021
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	4	69057536	69187710	66	0.5828
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	4	69188929	130282201	36500	0.0021
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	4	130286996	130287610	2	-2.5975
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	4	130292013	138311689	4524	0.0066
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	4	138311870	138312376	10	-3.3641
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	4	138312388	161272224	14134	0.0026
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	4	161273041	161289954	35	-0.8022
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	4	161290028	173224503	7702	0.0099
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	4	173225723	173226108	12	-1.911
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	4	173232554	190426037	11736	0.0128
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	4	190432112	190436258	4	-1.6889
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	4	190436765	191261904	386	0.0262
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	5	68532	46287063	30809	0.0063
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	5	46306765	46309259	8	1.0095
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	5	46313969	51732651	1146	0.0161
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	5	51739014	51739554	3	-1.1699
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	5	51740192	57357403	3934	0.0026
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	5	57361784	57365678	11	-0.6397
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	5	57365890	68865103	7325	0.004
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	5	68882059	69153891	6	-0.9324
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	5	69269183	104615052	20109	0.0095
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	5	104616331	104616352	2	1.7023
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	5	104617180	151494364	30242	0.0026
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	5	151495579	151498544	14	-2.1206
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	5	151500464	177131055	17505	3e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	5	177160157	177165211	3	2.3544
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	5	177187571	180722926	2004	-0.0096
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	6	94661	54039110	36770	0.0024
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	6	54039189	54039814	6	-1.3713
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	6	54043307	67067728	5462	0.0137
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	6	67068099	67099956	39	0.3517
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	6	67100079	74648586	5018	0.0016
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	6	74648953	74654069	9	0.9346
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	6	74658138	77071229	1468	-0.0027
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	6	77071668	77080517	12	0.6051
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	6	77080722	77084501	23	0.0603
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	6	77089673	77089929	3	1.1399
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	6	77090104	77493251	262	0.0146
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	6	77496587	77509408	20	0.5273
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	6	77509476	79019608	980	0.0076
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	6	79025784	79091659	109	0.3107
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	6	79091746	80362416	778	-0.0119
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	6	80364135	80364640	2	-1.5398
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	6	80365739	103841522	14712	0.0042
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	6	103844669	103868754	46	-1.3563
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	6	103872163	115302149	7253	-0.0046
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	6	115309225	115309299	3	-1.7339
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	6	115309483	134307961	11829	-0.0014
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	6	134310764	134311325	2	-1.7797
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	6	134313765	154967014	13909	0.0059
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	6	154969575	154970577	4	-1.1485
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	6	154977356	170892930	11234	0.005
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	7	52911	11886875	7595	0.0092
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	7	11887398	11887944	5	-1.6165
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	7	11890777	22401305	8506	0.0071
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	7	22401997	22403012	2	-3.5695
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	7	22405279	38353968	11457	0.0042
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	7	38357890	38364572	5	-1.9018
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	7	38367482	87495495	26900	-4e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	7	87503175	87510882	19	-0.6226
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	7	87510909	90004155	1633	0.0305
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	7	90004712	90004793	2	1.4407
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	7	90005775	100748148	6145	-0.0036
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	7	100748922	100750595	2	-1.3608
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	7	100752321	100839206	35	-0.0425
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	7	100846452	100846669	2	-1.8711
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	7	100849631	109228448	5104	0.0019
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	7	109228480	109241146	11	0.9389
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	7	109241218	142154515	20482	0.005
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	7	142156294	142165684	28	0.683
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	7	142165914	156084551	8944	0.0117
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	7	156085929	156086940	3	-3.4815
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	7	156087669	157461158	804	-0.0085
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	7	157463598	157464372	3	-1.3612
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	7	157470622	158819765	824	0.0162
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	8	21254	2235095	1647	-0.0012
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	8	2235234	2243475	4	-1.2342
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	8	2243551	3895249	1992	0.0236
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	8	3895836	3895858	2	-4.4334
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	8	3897504	7158228	4182	0.0316
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	8	7158507	7174056	3	2.8755
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	8	7181231	9091324	1129	0.0269
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	8	9093777	9101213	30	-0.8589
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	8	9101309	25028104	12855	0.0107
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	8	25030360	25040167	26	0.7634
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	8	25040250	112363642	51145	0.0011
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	8	112363846	112364421	5	-1.7241
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	8	112364436	146268959	22932	0.0059
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	9	36587	6651406	6356	0.0155
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	9	6651613	6660062	5	-1.1644
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	9	6662097	43159599	25008	0.0191
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	9	43177963	43712046	39	-0.521
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	9	43716914	44190849	35	-0.0148
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	9	44191224	44201941	6	1.0103
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	9	44205408	71298073	1376	-0.0146
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	9	71298105	71298469	10	0.7037
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	9	71298481	104450515	23088	0.0046
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	9	104450610	104455372	2	-1.332
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	9	104456306	112064263	5928	0.0107
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	9	112064610	112072252	4	-1.3493
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	9	112072499	140211215	18051	-4e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	10	62759	51492405	33709	0.0069
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	10	51500366	51573774	6	-1.4791
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	10	51580604	56850159	3945	0.0151
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	10	56850247	56850323	3	-1.654
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	10	56850327	67027999	7146	0.0046
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	10	67028747	67031920	3	-1.3953
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	10	67032187	135356694	46281	0.0055
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	11	188510	4926819	2481	0.0053
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	11	4926853	4932848	28	-1.6374
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	11	4932910	4933190	7	-0.6414
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	11	4933390	5743981	789	0.0247
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	11	5744656	5765715	32	0.5359
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	11	5765914	22300731	12378	0.0035
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	11	22308044	22308181	2	-2.4666
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	11	22311821	49715563	18188	0.0058
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	11	49716131	49717264	6	-1.0921
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	11	49722737	51421003	511	0.0179
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	11	54458221	54793048	46	-0.2961
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	11	54795833	55119916	194	0.0484
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	11	55130608	55198894	48	0.5565
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	11	55200787	99344899	27213	0.0024
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	11	99348556	99348812	3	-1.9106
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	11	99350912	101099594	1450	-0.0033
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	11	101103070	101103174	4	1.487
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	11	101103422	134114603	23497	0.0077
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	11	134114767	134121027	8	0.865
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	11	134121417	134449982	271	0.0257
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	12	20703	9525137	6207	0.0123
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	12	9529176	9619559	23	-1.4491
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	12	9626236	11104058	1039	0.0033
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	12	11105412	11132555	15	0.6842
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	12	11132799	31156324	14198	0.0057
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	12	31160565	31293957	88	0.5824
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	12	31298076	33185927	1307	0.0014
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	12	33192673	33198641	27	-0.5894
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	12	33199627	44186092	5622	0.0109
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	12	44190705	44195804	3	2.1803
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	12	44199559	47011309	1719	0.0018
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	12	47011506	47011682	3	-1.9668
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	12	47016303	132288262	54821	-2e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	13	17924949	71374989	35139	0.0101
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	13	71375556	71378557	4	-2.9739
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	13	71378606	114126499	29151	0.0047
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	14	18072124	18759317	48	0.115
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	14	18763231	19493212	142	0.6066
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	14	19494766	105531947	54954	0.0065
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	14	105550720	105550986	2	-1.9121
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	14	105553173	105609107	25	-0.0883
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	14	105612798	105632486	12	-2.4718
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	14	105638145	105811819	80	-0.7667
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	14	105817770	105824912	8	0.2464
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	14	105825048	105854089	15	-0.5526
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	14	105867070	105934571	35	0.1033
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	14	105935767	105989139	55	-0.4179
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	14	105989153	106356482	224	0.0374
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	15	18276341	18841469	103	-0.0115
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	15	18841576	19438545	178	0.2548
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	15	19451059	19452665	2	-1.4027
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	15	19456767	19943111	82	0.3318
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	15	19945757	51982281	19489	0.007
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	15	51987642	51988652	2	-2.6738
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	15	51989791	63601155	7948	0.0116
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	15	63603995	63604577	2	-2.3542
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	15	63605440	74678566	6549	-2e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	15	74678682	74682829	19	-2.0401
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	15	74682830	100286563	17687	0.0093
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	16	777	54379470	27334	0.0103
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	16	54379898	54379945	2	1.5833
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	16	54387058	55318474	591	-0.0029
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	16	55318709	55323285	5	0.9983
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	16	55324332	69518615	8528	0.0016
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	16	69521229	69533862	10	-0.9046
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	16	69535588	87412501	15450	0.0086
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	16	87412581	87424867	3	-1.3491
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	16	87432022	88815036	574	-0.0277
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	17	526	36457239	20842	0.0079
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	17	36457437	36463669	2	-2.1928
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	17	36465434	36676616	135	0.004
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	17	36676629	36683976	18	1.2938
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	17	36684057	38787791	1110	0.0111
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	17	38794116	38795447	3	-1.0902
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	17	38799230	41750187	1522	0.0304
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	17	41750189	42139861	50	0.5119
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	17	42140165	78643088	21613	0.0051
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	18	1543	40230884	25221	0.0058
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	18	40230952	40232623	5	-1.0743
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	18	40236669	47292376	5043	4e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	18	47292484	47292752	2	-1.6141
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	18	47294965	54195433	4603	0.0124
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	18	54197984	54198006	2	-1.5109
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	18	54201463	60361878	4447	0.0151
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	18	60362606	60362926	2	-1.5025
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	18	60368396	61353956	662	0.021
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	18	61353975	61355697	16	0.8468
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	18	61358176	61855325	353	0.0923
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	18	61856491	61879320	20	-0.4861
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	18	61883718	76116029	10435	0.02
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	19	41910	63789666	29354	-0.0059
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	20	9305	1505236	1188	0.0114
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	20	1505512	1547142	66	0.273
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	20	1547584	62022790	41054	0.0093
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	20	62028993	62030083	2	1.6599
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	20	62034232	62426597	184	-0.024
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	21	9758742	13518903	166	-0.003
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	21	13521953	13525448	2	1.7638
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	21	13534480	22573005	6299	0.0157
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	21	22577771	22588870	10	-0.9893
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	21	22591163	43255895	15811	0.0115
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	21	43256321	43260542	2	-1.5082
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	21	43264244	43540692	193	4e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	21	43540826	43564562	13	-0.5851
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	21	43567174	43792481	150	0.0132
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	21	43795301	43797240	2	-2.8301
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	21	43798095	46921385	1766	0.006
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	22	14432528	14824877	64	0.4376
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	22	14857054	16435605	719	-0.003
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	22	16438748	16438885	2	2.2283
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	22	16442891	22660218	3832	-0.0182
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	22	22660269	22662625	3	-2.489
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	22	22662933	22667949	3	-0.1643
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	22	22674422	22731529	21	0.7443
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	22	22732321	49581321	18919	-6e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	X	108477	154835548	84385	0.0118
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	Y	2710438	57427647	8588	-0.8904
