Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	1	61735	16153497	8420	0.0011
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	1	16153536	16155010	9	-1.6048
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	1	16165661	16785390	270	-0.0091
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	1	16785564	17262247	196	-0.2934
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	1	17276241	72768916	34159	0.0033
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	1	72768936	72811148	45	-1.5789
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	1	72811904	75269284	1506	-1e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	1	75271072	75273866	2	1.2904
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	1	75273987	76050844	422	0.0124
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	1	76054763	76054854	2	-2.374
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	1	76059509	81888456	3851	0.0059
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	1	81888602	81888605	2	1.7245
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	1	81888667	112690326	19907	0.0088
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	1	112695965	112697213	22	-1.8284
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	1	112697241	152555706	8045	0.006
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	1	152555767	152586540	32	1.0671
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	1	152586576	152759678	173	0.0358
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	1	152761923	152768700	37	0.8596
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	1	152773905	161508875	5279	-4e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	1	161517939	161658658	57	0.6106
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	1	161658780	169216937	6007	0.0027
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	1	169233974	169242401	8	0.7703
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	1	169254877	174796405	3525	0.0013
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	1	174796556	174797333	7	-1.0407
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	1	174797385	194448234	13212	0.0122
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	1	194451411	194455018	2	-1.7097
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	1	194457016	210071062	10371	0.0086
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	1	210081613	210083984	3	1.321
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	1	210086552	243268406	23372	0.0068
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	1	243268959	243280885	6	-1.3098
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	1	243282484	249224388	3753	0.0156
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	2	12784	52754480	37211	0.0099
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	2	52754500	52781542	38	0.5775
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	2	52787949	75866236	14899	0.0085
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	2	75866381	75882656	19	0.501
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	2	75882855	79662090	2555	0.0176
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	2	79665026	79666524	2	1.8889
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	2	79667135	127852021	24629	0.0071
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	2	127857046	127857946	3	1.7413
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	2	127858646	131946313	2274	0.0081
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	2	131950542	131951299	2	-1.5663
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	2	131956558	135056484	1921	0.0163
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	2	135056675	135056870	2	1.6821
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	2	135058257	135064400	13	0.1027
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	2	135066476	135068007	4	0.9473
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	2	135068470	146862085	7302	0.0066
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	2	146864404	146866934	24	0.9057
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	2	146877806	150393010	1790	0.0129
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	2	150393737	150393751	2	-1.4321
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	2	150393850	154889673	3096	0.0073
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	2	154889809	154900223	4	-1.0537
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	2	154900325	180061655	15401	-6e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	2	180067192	180079144	3	-2.8911
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	2	180083591	194949683	8723	0.0059
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	2	194949966	194953657	3	1.6707
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	2	194954075	208354955	7968	0.0041
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	2	208355178	208359336	16	-0.6458
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	2	208359476	242783396	21994	-4e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	2	242915466	243034519	112	-0.8255
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	2	243034686	243089456	30	0.1226
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	3	60345	60006600	40743	0.0052
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	3	60007631	60007657	2	1.9834
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	3	60007697	60340452	386	0.0569
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	3	60340972	60426817	94	-0.9801
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	3	60433224	60777932	391	0.078
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	3	60780640	60781027	4	-1.0684
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	3	60784223	65189235	3770	0.0055
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	3	65189319	65199869	32	-0.7175
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	3	65199871	65206904	10	-0.0836
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	3	65206944	65210452	10	-0.9849
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	3	65216349	68746164	2424	0.0017
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	3	68746259	68747413	14	-1.5621
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	3	68748758	75421170	4875	-2e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	3	75427107	75639507	74	-0.7702
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	3	75645384	98945410	11017	0.0063
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	3	98948401	98949056	11	-0.6183
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	3	98949069	129791348	18778	0.0034
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	3	129791480	129806236	31	-0.4235
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	3	129806924	133024867	2128	-9e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	3	133024882	133024897	2	1.5082
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	3	133025012	140542539	4605	0.0022
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	3	140545701	140546984	2	-3.0541
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	3	140560618	162123366	13267	0.0085
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	3	162137600	162142705	14	-0.7815
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	3	162144248	162216832	59	0.0346
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	3	162217021	162218869	8	0.7842
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	3	162218885	162508192	193	0.0133
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	3	162508268	162536823	20	0.6516
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	3	162540009	162540490	3	1.8149
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	3	162545716	162626603	50	0.5631
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	3	162628614	187595294	15358	0.0053
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	3	187595378	187595713	2	1.622
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	3	187595740	192877902	3833	0.008
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	3	192877962	192879006	6	1.1279
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	3	192880473	197896118	2719	0.0047
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	4	12281	9451923	5250	-0.002
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	4	9456977	9547322	25	-0.479
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	4	9547838	10210390	530	-0.0226
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	4	10214160	10231498	29	-0.9905
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	4	10234214	34779054	17001	0.0091
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	4	34786500	34829872	39	-0.3473
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	4	34829913	43424452	5718	0.0078
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	4	43424930	43425162	3	-2.2291
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	4	43428426	69372003	13783	0.0021
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	4	69374941	69505115	66	0.5828
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	4	69506334	130062751	36503	0.0021
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	4	130067546	130068160	2	-2.5975
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	4	130072563	138092239	4522	0.0065
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	4	138092420	138092926	10	-3.3641
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	4	138092938	161052774	14136	0.0026
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	4	161053591	161070504	35	-0.8022
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	4	161070578	172987928	7703	0.0099
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	4	172989148	172989533	12	-1.911
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	4	172995979	190189043	11735	0.0128
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	4	190195118	190199264	4	-1.6888
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	4	190199771	191027923	386	0.0262
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	5	15532	46251306	30808	0.0063
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	5	46271008	46273502	8	1.0095
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	5	46278212	51696894	1146	0.0161
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	5	51703257	51703797	3	-1.1699
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	5	51704435	57321646	3933	0.0028
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	5	57326027	57329921	11	-0.6397
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	5	57330133	68829347	7325	0.004
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	5	68846303	69118135	6	-0.9324
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	5	69233427	104587153	20111	0.0094
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	5	104588432	104588453	2	1.7023
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	5	104589281	151514171	30243	0.0026
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	5	151515386	151518351	14	-2.1205
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	5	151520271	177198449	17505	3e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	5	177227551	177232605	3	2.3544
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	5	177254965	180790320	2004	-0.0096
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	6	149661	53931151	36770	0.0023
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	6	53931230	53931855	6	-1.3713
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	6	53935348	67011007	5463	0.0137
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	6	67011378	67043235	39	0.3517
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	6	67043358	74591858	5017	0.0017
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	6	74592225	74597341	9	0.9346
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	6	74601410	77014509	1468	-0.0027
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	6	77014948	77023797	12	0.6051
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	6	77024002	77027781	23	0.0603
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	6	77032953	77033209	3	1.1399
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	6	77033384	77436532	262	0.0146
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	6	77439868	77452689	20	0.5273
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	6	77452757	78962889	980	0.0075
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	6	78969065	79034940	109	0.3107
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	6	79035027	80305697	778	-0.0119
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	6	80307416	80307921	2	-1.5398
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	6	80309020	103734829	14711	0.0042
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	6	103737976	103762061	46	-1.3563
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	6	103765470	115195456	7253	-0.0046
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	6	115202532	115202606	3	-1.7339
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	6	115202790	134266268	11834	-0.0014
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	6	134269071	134269632	2	-1.7797
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	6	134272072	154925322	13911	0.0059
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	6	154927883	154928885	4	-1.1485
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	6	154935664	171051005	11234	0.005
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	7	43355	11920350	7594	0.0093
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	7	11920873	11921419	5	-1.6165
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	7	11924252	22434780	8507	0.0071
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	7	22435472	22436487	2	-3.5695
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	7	22438754	38387443	11455	0.0043
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	7	38391365	38398047	5	-1.9018
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	7	38400957	87657559	26902	-5e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	7	87665239	87672946	19	-0.6226
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	7	87672973	90166219	1633	0.0305
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	7	90166776	90166857	2	1.4407
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	7	90167839	100961428	6146	-0.0036
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	7	100962202	100963875	2	-1.3608
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	7	100965601	101052486	35	-0.0425
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	7	101059732	101059949	2	-1.8711
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	7	101062911	109441212	5105	0.002
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	7	109441244	109453910	11	0.9389
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	7	109453982	142474939	20484	0.005
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	7	142476719	142486115	28	0.683
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	7	142486345	156391790	8943	0.0118
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	7	156393168	156394179	3	-3.4815
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	7	156394908	157768397	804	-0.0085
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	7	157770837	157771611	3	-1.3612
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	7	157777861	159127004	824	0.0162
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	8	31254	2247688	1648	-0.001
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	8	2247827	2256068	4	-1.2342
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	8	2256144	3907841	1992	0.0236
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	8	3908428	3908450	2	-4.4334
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	8	3910096	7170818	4182	0.0316
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	8	7171097	7186646	3	2.8755
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	8	7193821	9053914	1128	0.0268
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	8	9056367	9063803	30	-0.8589
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	8	9063899	24972187	12855	0.0106
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	8	24974443	24984250	26	0.7634
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	8	24984333	112294466	51150	0.0012
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	8	112294670	112295245	5	-1.7241
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	8	112295260	146298155	22934	0.0059
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	9	46587	6661406	6358	0.0153
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	9	6661613	6670062	5	-1.1644
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	9	6672097	43169603	25014	0.0191
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	9	43187967	43772050	39	-0.521
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	9	43776918	44250853	35	-0.0148
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	9	44251228	44261945	6	1.0103
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	9	44265412	72108253	1377	-0.0147
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	9	72108285	72108649	10	0.7037
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	9	72108661	105410694	23090	0.0046
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	9	105410789	105415551	2	-1.332
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	9	105416485	113024442	5931	0.0108
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	9	113024789	113032431	4	-1.3493
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	9	113032678	141091394	18052	-4e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	10	72759	51822399	33709	0.0069
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	10	51830360	51903768	6	-1.4791
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	10	51910598	57180153	3944	0.0151
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	10	57180241	57180317	3	-1.654
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	10	57180321	67357993	7146	0.0046
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	10	67358741	67361914	3	-1.3953
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	10	67362181	135506704	46279	0.0055
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	11	198510	4970243	2480	0.0052
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	11	4970277	4976272	28	-1.6374
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	11	4976334	4976614	7	-0.6414
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	11	4976814	5787405	789	0.0247
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	11	5788080	5809139	32	0.5359
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	11	5809338	22344155	12377	0.0035
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	11	22351468	22351605	2	-2.4666
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	11	22355245	49758987	18186	0.0057
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	11	49759555	49760688	6	-1.0921
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	11	49766161	51564427	511	0.0179
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	11	54701645	55036472	46	-0.2961
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	11	55039257	55363340	194	0.0484
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	11	55374032	55442318	48	0.5565
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	11	55444211	99839689	27210	0.0024
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	11	99843346	99843602	3	-1.9106
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	11	99845702	101594384	1450	-0.0033
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	11	101597860	101597964	4	1.487
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	11	101598212	134609393	23493	0.0076
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	11	134609557	134615817	8	0.865
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	11	134616207	134944770	271	0.0257
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	12	150442	9633870	6206	0.0122
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	12	9637909	9713674	21	-1.5101
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	12	9714954	11212791	1041	0.0021
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	12	11214145	11241288	15	0.6842
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	12	11241532	31265057	14196	0.0057
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	12	31269298	31402690	87	0.5818
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	12	31406809	33294660	1307	0.0014
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	12	33301406	33307374	27	-0.5894
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	12	33308360	45899825	5621	0.0109
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	12	45904438	45909537	3	2.1803
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	12	45913292	48725042	1719	0.0018
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	12	48725239	48725415	3	-1.9668
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	12	48730036	133778189	54818	-2e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	13	19026949	72476988	35136	0.0101
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	13	72477555	72480556	4	-2.9739
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	13	72480605	115108397	29150	0.0047
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	14	19002124	19689317	48	0.115
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	14	19693231	20423372	142	0.6066
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	14	20424926	106460902	54951	0.0065
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	14	106479675	106479941	2	-1.9121
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	14	106482128	106538062	25	-0.0883
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	14	106541753	106561441	12	-2.4718
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	14	106567100	106740774	80	-0.7667
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	14	106746725	106753867	8	0.2464
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	14	106754003	106783044	15	-0.5526
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	14	106796025	106863526	35	0.1033
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	14	106864722	106918094	55	-0.4179
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	14	106918108	107285437	224	0.0374
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	15	20016328	21173886	267	0.1488
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	15	21186400	21188006	2	-1.4027
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	15	21192108	22441747	96	0.3297
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	15	22444393	54194989	19489	0.007
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	15	54200350	54201360	2	-2.6738
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	15	54202499	65814102	7946	0.0116
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	15	65816942	65817524	2	-2.3542
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	15	65818387	76891511	6549	-2e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	15	76891627	76895774	19	-2.0401
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	15	76895775	102469040	17686	0.0093
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	16	60777	55821969	27332	0.0103
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	16	55822397	55822444	2	1.5833
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	16	55829557	56760973	591	-0.0029
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	16	56761208	56765784	5	0.9983
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	16	56766831	88885000	23909	0.0064
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	16	88885080	88897366	3	-1.3491
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	16	88904521	90287535	576	-0.028
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	17	526	39203713	20841	0.0079
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	17	39203911	39210143	2	-2.1928
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	17	39211908	39423090	135	0.004
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	17	39423103	39430450	18	1.2938
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	17	39430531	41432265	1110	0.0111
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	17	41438590	41439921	3	-1.0902
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	17	41443704	44394412	1522	0.0304
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	17	44394414	44784678	50	0.5119
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	17	44784982	81049726	21614	0.0051
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	18	11543	41976886	25220	0.0058
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	18	41976954	41978625	5	-1.0743
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	18	41982671	49038378	5043	4e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	18	49038486	49038754	2	-1.6141
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	18	49040967	56044453	4602	0.0123
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	18	56047004	56047026	2	-1.5109
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	18	56050483	62210898	4448	0.0152
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	18	62211626	62211946	2	-1.5025
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	18	62217416	63202976	661	0.0213
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	18	63202995	63204717	15	0.8507
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	18	63207196	63704345	353	0.0923
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	18	63705511	63728340	20	-0.4861
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	18	63732738	78015057	10435	0.02
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	19	90910	59097854	29353	-0.0059
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	20	61305	1557236	1188	0.0114
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	20	1557512	1599142	66	0.273
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	20	1599584	62552346	41057	0.0093
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	20	62558549	62559639	2	1.6599
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	20	62563788	62956153	184	-0.024
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	21	10736871	14597032	166	-0.003
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	21	14600082	14603577	2	1.7638
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	21	14612609	23651134	6299	0.0157
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	21	23655900	23666999	10	-0.9893
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	21	23669292	44382826	15811	0.0115
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	21	44383252	44387473	2	-1.5082
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	21	44391175	44716264	193	4e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	21	44716398	44740134	13	-0.5851
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	21	44742746	44968053	150	0.0132
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	21	44970873	44972812	2	-2.8301
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	21	44973667	48096957	1765	0.0059
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	22	16052528	16444877	64	0.4376
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	22	16477054	18055605	719	-0.003
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	22	18058748	18058885	2	2.2283
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	22	18062891	24330218	3832	-0.0182
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	22	24330269	24332625	3	-2.489
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	22	24332933	24337949	3	-0.1643
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	22	24344422	24401529	21	0.7443
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	22	24402321	51234455	18919	-6e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	X	168477	105955209	55607	0.012
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	X	105955372	105956779	2	-4.6897
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	X	105957674	134331294	16034	0.0091
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	X	134332032	134332588	3	-3.7124
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	X	134335227	135201114	493	0.0169
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	X	135201156	135201508	2	-4.0411
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	X	135203373	155182354	12232	0.0194
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_F12_895760	Y	2650438	59018259	8633	-0.8911
