Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	1	61735	25583341	14164	0.052
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	1	25593128	25662212	31	0.6602
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	1	25663310	72768916	28856	0.0367
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	1	72768936	72811148	45	-1.3353
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	1	72811904	87161637	9392	0.0312
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	1	87163233	87165593	3	-1.7669
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	1	87171727	106019205	11637	0.0312
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	1	106019236	106022375	16	0.5226
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	1	106024055	112690326	4644	0.0307
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	1	112695965	112706060	27	0.5241
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	1	112706062	152555527	8037	0.0356
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	1	152555706	152590494	36	-1.0458
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	1	152590565	187715854	23782	0.0388
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	1	187717560	187721369	2	-1.8783
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	1	187724610	205002470	11534	0.0341
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	1	205003818	205294655	190	0.2832
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	1	205298516	229811169	16239	0.0312
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	1	229816856	229820196	3	-2.8846
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	1	229820456	248737447	13886	0.0339
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	1	248749194	248805339	34	-0.6397
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	1	248808557	249224388	144	0.0694
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	2	12784	6730973	5122	0.0223
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	2	6731471	6731740	2	-1.4473
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	2	6733969	7639373	804	0.0132
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	2	7643065	7646972	2	1.7847
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	2	7647007	34691069	18181	0.0366
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	2	34699315	34740799	52	0.5368
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	2	34741027	52754865	13049	0.0237
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	2	52754881	52781542	34	0.6162
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	2	52787949	57403320	3355	0.0336
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	2	57403877	57406465	5	1.4485
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	2	57406559	78878109	13509	0.0322
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	2	78882061	78913359	16	-0.7524
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	2	78917764	98118212	7193	0.0256
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	2	98140747	98177312	15	-0.6775
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	2	98179204	146864429	29532	0.0243
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	2	146864443	146866934	22	0.831
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	2	146877806	180413362	20515	0.0268
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	2	180413371	180421497	23	-0.78
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	2	180421512	242486064	38401	0.0279
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	2	242486224	242497383	10	-0.8612
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	2	242497767	242733055	37	0.2083
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	2	242733086	242771411	3	-0.8523
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	2	242772695	242783396	7	0.0377
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	2	242915466	243034519	110	-0.7389
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	2	243034686	243089456	30	0.0775
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	3	60345	44547335	31817	0.0291
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	3	44547838	47478509	1750	-0.2403
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	3	47491822	47492720	2	-2.5089
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	3	47497214	56206638	4671	-0.2492
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	3	56207492	60132390	2689	0.0388
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	3	60132555	60264473	128	-1.0091
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	3	60271725	68746164	6808	0.0354
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	3	68746259	68747413	14	-1.3515
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	3	68748758	98937784	15949	0.0243
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	3	98944458	98949308	36	0.4181
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	3	98949314	119350345	12639	0.0335
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	3	119351398	119353938	5	-1.6328
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	3	119355411	129786739	6113	0.0368
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	3	129786753	129806236	42	0.6234
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	3	129806924	136019099	4035	0.0423
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	3	136022951	136025426	2	-3.3052
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	3	136038541	161515597	15564	0.0275
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	3	161515627	161515649	2	1.6221
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	3	161515944	162530870	693	0.0318
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	3	162532950	162540490	7	-1.209
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	3	162545716	162625995	48	0.3493
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	3	162626572	192873704	19192	0.0281
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	3	192874747	192879006	8	1.1018
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	3	192880473	197896118	2720	0.0475
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	4	12281	10223628	5805	0.0384
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	4	10223848	10234266	28	2.3825
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	4	10234608	30942498	14716	0.0278
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	4	30943048	30943209	2	-1.3795
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	4	30943689	31447488	326	0.0564
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	4	31448474	31450380	6	-1.1688
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	4	31450974	49297235	10976	0.0207
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	4	49309854	49658223	18	-0.5671
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	4	49658612	64705785	7603	0.0238
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	4	64707581	64708258	8	0.9189
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	4	64716431	69372003	2881	0.0155
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	4	69374941	69528959	69	0.5767
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	4	69536788	70120322	318	0.0138
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	4	70120699	70232022	60	-0.4881
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	4	70232124	86975062	10452	0.0251
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	4	86975223	86979944	21	-0.4657
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	4	86980089	104745571	10571	0.0318
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	4	104751630	104751637	5	1.0082
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	4	104751644	108050955	1861	0.0279
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	4	108051326	108066385	10	-1.088
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	4	108066735	122281973	8814	0.0222
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	4	122282468	122284555	25	-0.7698
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	4	122284589	152791637	17784	0.0248
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	4	152791654	152792567	10	-1.1077
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	4	152792891	152794859	4	0.8648
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	4	152795388	190189043	24719	0.0201
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	4	190195118	190199264	4	-2.3639
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	4	190199771	191027923	386	0.015
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	5	15532	717525	312	0.2759
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	5	717561	773568	24	0.8047
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	5	779860	809806	14	0.1388
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	5	817850	852566	16	-0.5603
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	5	863797	46251306	30444	0.2561
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	5	46271008	46273502	8	-1.4876
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	5	46278212	51422666	997	0.0408
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	5	51429429	51431680	3	-1.1445
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	5	51435421	64253383	8449	0.029
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	5	64254195	103506552	22293	-0.2673
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	5	103506757	103534126	23	-0.8282
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	5	103535488	132839466	19162	-0.2655
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	5	132843764	132928170	78	0.0675
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	5	132929181	135253798	1542	-0.25
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	5	135256672	135256998	2	-1.8228
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	5	135257137	155371550	12787	-0.2584
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	5	155371739	169742361	10117	0.0284
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	5	169742646	169746321	2	-1.5563
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	5	169746734	180378888	6644	0.0392
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	5	180380203	180418103	17	0.6745
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	5	180433225	180790320	171	0.0115
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	6	149661	29833779	21737	0.0273
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	6	29833948	29837072	13	0.6113
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	6	29837187	29874808	24	1.6056
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	6	29876959	32452929	1186	0.0398
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	6	32454275	32509476	19	1.3477
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	6	32516928	32573771	14	0.5626
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	6	32574014	53931275	13785	0.037
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	6	53931380	53931803	3	1.2862
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	6	53931855	62493865	2859	-0.0444
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	6	62494375	62495863	3	-2.4844
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	6	62496666	69797700	4581	-0.2693
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	6	69800043	69894094	52	-0.6054
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	6	69897263	74592225	3022	-0.2616
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	6	74592457	74601410	9	-2.0096
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	6	74603555	77027781	1501	-0.2899
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	6	77032953	77033209	3	1.2008
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	6	77033384	77436532	261	-0.2802
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	6	77439868	77452446	17	-0.7269
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	6	77452641	89452355	7628	-0.2713
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	6	89463017	95680019	4159	0.0139
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	6	95834652	102122091	3847	-0.2708
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	6	102122403	102436770	189	0.0459
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	6	102438729	131723527	18130	-0.2675
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	6	131726953	131834865	65	0.0109
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	6	131836666	134266268	1684	-0.2521
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	6	134269071	134269632	2	1.5961
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	6	134272072	141170343	4534	-0.2581
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	6	141171023	144216878	1904	0.0208
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	6	144216941	146812517	1597	-0.2569
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	6	146815309	149989457	2230	0.033
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	6	149996720	152988821	2228	-0.2652
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	6	152991418	164357864	7987	0.024
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	6	164358228	171051005	4668	-0.2667
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	7	43355	3609712	1622	0.2828
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	7	3609843	3624804	32	-0.4155
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	7	3624865	8751432	3375	0.2676
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	7	8751580	8751677	3	-1.1163
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	7	8751843	22434780	11074	0.2521
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	7	22435472	22436487	2	-3.283
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	7	22438754	109433798	51288	0.2579
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	7	109437092	109437757	14	0.9517
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	7	109437772	109441212	10	0.0205
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	7	109441244	109453910	11	1.2361
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	7	109453982	120300996	6484	0.2572
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	7	120302287	120312759	8	-0.7029
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	7	120315219	142047229	13735	0.2477
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	7	142047315	142047648	3	-1.293
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	7	142099013	142474939	253	0.0058
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	7	142476719	142486045	27	0.4887
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	7	142486115	143873952	835	0.043
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	7	143896252	144066947	44	0.7358
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	7	144074929	150285104	3855	0.0277
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	7	150285801	150312916	13	-0.5099
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	7	150313184	159127004	5832	0.1095
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	8	31254	2701934	2120	0.0261
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	8	2703533	2707186	9	-0.8421
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	8	2707196	5864927	4335	0.0015
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	8	5868800	5868845	2	-1.6122
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	8	5869938	8054344	1606	0.0635
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	8	8055260	8072303	3	1.0736
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	8	8087144	8385797	288	-0.0113
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	8	8386150	8386357	3	-1.5176
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	8	8386442	39230659	22544	0.0263
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	8	39235603	39386965	59	0.8357
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	8	39388299	112295202	42060	0.0209
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	8	112295245	112295260	2	-3.474
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	8	112300281	130985863	12453	0.0245
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	8	130990683	131032357	25	0.4461
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	8	131034168	146298155	10453	0.0354
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	9	46587	27315623	23341	-0.2615
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	9	27322370	28166400	761	0.0398
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	9	28167088	29091097	690	-0.264
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	9	29094549	29094997	2	-3.12
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	9	29097680	43662908	6595	-0.2572
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	9	43663163	44145352	23	-0.8428
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	9	44155888	44629223	46	-0.1894
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	9	44727859	44888127	40	0.2727
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	9	44899920	68183981	151	-0.1868
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	9	68186051	68186057	4	1.8029
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	9	68186059	101094999	21291	-0.2524
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	9	101095620	101096102	2	-2.1293
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	9	101096707	141091394	26956	-0.2509
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	10	72759	24377674	19239	0.0221
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	10	24377675	24378054	10	-2.3602
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	10	24378908	42685649	9960	0.022
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	10	42690172	42786973	16	-0.461
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	10	42787842	44065519	823	0.0102
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	10	44068558	44068825	2	-1.8356
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	10	44068937	59210505	9124	0.0171
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	10	59210521	59210773	3	-1.8455
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	10	59218495	61365074	1533	0.0133
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	10	61365182	61366394	10	0.7435
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	10	61366495	67308709	4024	0.0246
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	10	67308737	67311360	15	-0.5894
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	10	67313862	79065152	7449	0.0281
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	10	79067725	79071253	10	-0.8687
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	10	79074996	88947061	7013	0.0308
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	10	88949427	89046064	15	0.5961
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	10	89046498	90938673	1388	-0.2469
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	10	90942967	90948030	11	-2.6678
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	10	90948090	92462715	1093	-0.2664
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	10	92462824	92463291	3	-1.7601
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	10	92471580	108262213	9638	-0.2517
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	10	108262968	108332579	49	0.1774
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	10	108333973	135506704	19653	-0.2606
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	11	198510	4967376	2474	0.0405
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	11	4967396	4975675	30	-1.1818
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	11	4975705	5787405	799	0.0187
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	11	5788080	5809139	32	-0.5201
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	11	5809338	6107790	240	0.0311
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	11	6108269	6116843	4	-1.3896
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	11	6117014	18940322	9180	0.037
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	11	18940856	18961402	50	0.6516
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	11	18961597	55363340	21849	0.0309
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	11	55374032	55453009	59	-1.6097
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	11	55453576	60736757	3244	0.0397
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	11	60737857	60738202	2	-1.9585
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	11	60738648	95368454	20735	0.0351
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	11	95371352	95372979	3	-1.3781
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	11	95374537	101594384	4669	0.018
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	11	101597860	101597964	4	1.5258
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	11	101598212	134944770	23774	0.0347
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	12	150442	2246116	1270	0.0511
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	12	2247432	2251078	7	-0.9828
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	12	2251311	2254509	22	-0.3236
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	12	2254619	2258406	12	-0.764
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	12	2259967	30239267	19267	0.0272
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	12	30239314	30241370	14	-0.5528
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	12	30243454	90483350	35217	0.0298
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	12	90491669	90492074	7	-1.1513
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	12	90493557	133778189	29250	0.034
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	13	19026949	25035607	4053	0.0435
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	13	25039590	25039598	3	1.25
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	13	25039678	38072036	9506	0.0296
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	13	38072224	38088330	16	0.8888
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	13	38088374	53094799	9907	0.0352
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	13	53097984	53105785	3	-1.3579
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	13	53117879	107491451	35587	0.0192
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	13	107493499	107493947	2	-1.608
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	13	107497521	115108397	5220	0.0271
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	14	19002124	19432799	30	0.0805
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	14	19434374	20420239	158	-0.3167
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	14	20423372	74006707	34156	0.0337
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	14	74006851	74020979	7	-1.6219
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	14	74029900	86284754	8175	0.0221
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	14	86286312	86301689	12	-1.1249
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	14	86303284	87085304	530	0.0174
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	14	87085308	87090865	2	-1.6332
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	14	87092535	94972429	5073	0.0321
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	14	94973644	94984522	13	-0.8073
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	14	94989917	106542277	7021	0.0271
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	14	106547314	106561441	10	1.1559
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	14	106567100	106753859	86	0.0586
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	14	106753862	106753867	2	2.2255
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	14	106754003	107285437	328	0.0216
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	15	20016328	20264286	54	0.0836
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	15	20265978	22673399	365	-0.7339
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	15	22681076	102469040	51637	0.0273
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	16	60777	8131265	5710	-0.0464
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	16	8131713	8160367	12	0.5842
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	16	8160516	20515235	8239	-0.025
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	16	20515294	20533520	20	-0.962
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	16	20533641	34459601	6557	-0.0596
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	16	34459709	34755566	169	0.3189
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	16	34757071	55796594	6612	-0.1995
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	16	55798222	55798779	3	1.5411
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	16	55804348	90287535	25098	-0.2009
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	17	526	16654301	10510	0.0393
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	17	16657331	16741528	15	-0.453
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	17	16741784	18317181	916	0.0338
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	17	18317193	18465221	32	0.5278
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	17	18469197	19514241	389	0.0237
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	17	19514756	19515061	4	-0.9278
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	17	19518283	20865108	607	0.0583
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	17	20867944	20868912	2	1.4828
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	17	20869898	39421708	8496	0.0433
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	17	39423014	39423305	10	1.821
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	17	39423320	39430157	10	0.5088
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	17	39430173	39430450	3	3.5644
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	17	39430531	54159044	8495	0.0427
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	17	54160914	54172591	27	-1.0839
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	17	54172823	81049726	15778	0.0435
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	18	11543	37584470	22362	0.0235
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	18	37585038	37585740	2	-2.1678
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	18	37586416	40051678	1708	0.012
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	18	40056569	40057767	25	-2.0168
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	18	40058395	51524842	7904	0.0211
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	18	51524999	51525152	2	-1.8091
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	18	51528368	65298258	9452	0.0196
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	18	65304182	65312029	8	-1.2843
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	18	65315347	78015057	9345	0.0199
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	19	90910	255830	7	0.2541
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	19	257392	5506659	1593	-0.2391
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	19	5510239	5510580	2	-2.3714
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	19	5510653	24507172	9651	-0.2355
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	19	24582577	27951817	22	0.4034
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	19	27957039	34725299	4799	0.0309
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	19	34727835	34728482	3	-1.1721
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	19	34730684	43290773	4495	0.0363
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	19	43294390	43542831	118	-0.7625
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	19	43549014	53517082	5217	0.0414
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	19	53518514	53552229	23	0.4222
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	19	53554240	56282369	1563	0.0381
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	19	56282535	56286293	4	1.2902
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	19	56288941	59097854	1849	0.0366
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	20	61305	1552503	1185	0.0549
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	20	1557190	1582092	56	-1.0509
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	20	1582207	52644868	33764	0.0334
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	20	52647808	52652480	10	-0.8364
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	20	52652483	52653236	12	-0.199
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	20	52653829	52658651	16	-0.954
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	20	52662574	62956153	7460	0.0318
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	21	10736871	11013964	77	0.3603
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	21	11018107	14570299	83	0.02
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	21	14570574	48096957	24254	0.2359
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	22	16052528	23027928	3782	0.0425
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	22	23031351	23031508	2	-3.4499
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	22	23033257	24271745	806	0.0319
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	22	24283016	24330218	26	-0.4975
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	22	24330269	24331967	2	-2.9923
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	22	24332625	24337949	4	-0.1892
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	22	24344422	24396814	20	0.8651
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	22	24401529	51234455	18921	0.0411
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	X	168477	76353650	40132	0.0041
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	X	76362292	76378656	2	-2.1482
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	X	76378658	85916760	4977	0.0069
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	X	85917207	85917714	2	-3.3034
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	X	85918762	115133681	15664	2e-04
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	X	115137955	115150638	7	1.0641
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	X	115156419	155182354	23777	-0.0022
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	Y	2650438	5944602	804	-2.4241
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	Y	5944603	5970099	12	-4.0597
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	Y	5971016	6101425	55	-2.5702
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	Y	6107901	6313572	91	-3.8634
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	Y	6315579	19571480	4700	-2.9716
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	Y	19574890	21088297	704	-3.5235
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	Y	21088485	23859163	1053	-2.9949
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	Y	23859468	28457337	1039	-3.4191
RETCH_p_TCGA_180_SNP_2N_GenomeWideSNP_6_H07_895764	Y	28458648	59018259	175	-2.6103
