Source Name	Provider	Material Type	Term Source REF	Characteristics[Organism]	Term Source REF	Characteristics[Sex]	Term Source REF	Characteristics[DiseaseState]	Term Source REF	Comment[OCG Cohort]	Sample Name	Material Type	Term Source REF	Characteristics[OrganismPart]	Term Source REF	Description	Protocol REF	Performer	Extract Name	Material Type	Term Source REF	Comment[SRA_SAMPLE]	Description	Protocol REF	Protocol REF	Performer	Extract Name	Comment[LIBRARY_LAYOUT]	Comment[LIBRARY_SOURCE]	Comment[LIBRARY_STRATEGY]	Comment[LIBRARY_SELECTION]	Comment[NOMINAL_LENGTH]	Comment[NOMINAL_SDEV]	Comment[LIBRARY_NAME]	Comment[SRA_EXPERIMENT]	Description	Protocol REF	Performer	Date	Assay Name	Technology Type	Term Source REF	Comment[SPOT_LENGTH]	Protocol REF	Parameter Value[Software Versions]	Protocol REF	Derived Array Data File	Comment[SRA_RUN]	Comment[SRA_FILE_URI]	Comment[OCG Data Level]	Comment[ASSEMBLY_NAME]	Protocol REF	Derived Array Data File	Comment[OCG Data Level]
TARGET-30-PAHYWC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAHYWC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAHYWC-01A-01W	DNA	EFO	SRS255476	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAHYWC-01A-01W Solexa-24438 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	42.083	Solexa-24438	SRX092070	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-20	TARGET-30-PAHYWC-01A-01W Solexa-24438 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613W9AAXX100420.7.C310.6258_3508-T.5.bam	SRR331507	@dbgap@:reads/SRP012002/SRS255476/SRX092070/SRR331507/SRR331507.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAHYWC.seg.txt	3
TARGET-30-PAHYWC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAHYWC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAHYWC-01A-01W	DNA	EFO	SRS255476	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAHYWC-01A-01W Solexa-24438 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	42.083	Solexa-24438	SRX092070	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-20	TARGET-30-PAHYWC-01A-01W Solexa-24438 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613W9AAXX100420.7.C310.6258_3508-T.5.bam	SRR331507	@dbgap@:reads/SRP012002/SRS255476/SRX092070/SRR331507/SRR331507.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAHYWC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAHYWC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAHYWC-10A-01W	DNA	EFO	SRS083629	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAHYWC-10A-01W Solexa-24439 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	41.743	Solexa-24439	SRX091411	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-20	TARGET-30-PAHYWC-10A-01W Solexa-24439 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613W9AAXX100420.8.C310.6258_3508-N.5.bam	SRR330222	@dbgap@:reads/SRP012002/SRS083629/SRX091411/SRR330222/SRR330222.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAHYWC.seg.txt	3
TARGET-30-PAHYWC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAHYWC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAHYWC-10A-01W	DNA	EFO	SRS083629	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAHYWC-10A-01W Solexa-24439 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	41.743	Solexa-24439	SRX091411	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-20	TARGET-30-PAHYWC-10A-01W Solexa-24439 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613W9AAXX100420.8.C310.6258_3508-N.5.bam	SRR330222	@dbgap@:reads/SRP012002/SRS083629/SRX091411/SRR330222/SRR330222.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAICGF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAICGF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAICGF-01A-01W	DNA	EFO	SRS255472	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAICGF-01A-01W Solexa-24417 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	42.154	Solexa-24417	SRX091381	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-13	TARGET-30-PAICGF-01A-01W Solexa-24417 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613FJAAXX100413.7.C310.6258_3254-T.5.bam	SRR330298	@dbgap@:reads/SRP012002/SRS255472/SRX091381/SRR330298/SRR330298.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAICGF.seg.txt	3
TARGET-30-PAICGF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAICGF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAICGF-01A-01W	DNA	EFO	SRS255472	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAICGF-01A-01W Solexa-24417 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	42.154	Solexa-24417	SRX091381	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-13	TARGET-30-PAICGF-01A-01W Solexa-24417 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613FJAAXX100413.7.C310.6258_3254-T.5.bam	SRR330298	@dbgap@:reads/SRP012002/SRS255472/SRX091381/SRR330298/SRR330298.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAICGF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAICGF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAICGF-10A-01W	DNA	EFO	SRS083615	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAICGF-10A-01W Solexa-24418 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	44.552	Solexa-24418	SRX092097	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-13	TARGET-30-PAICGF-10A-01W Solexa-24418 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613FJAAXX100413.8.C310.6258_3254-N.3.bam	SRR331797	@dbgap@:reads/SRP012002/SRS083615/SRX092097/SRR331797/SRR331797.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAICGF.seg.txt	3
TARGET-30-PAICGF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAICGF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAICGF-10A-01W	DNA	EFO	SRS083615	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAICGF-10A-01W Solexa-24418 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	44.552	Solexa-24418	SRX092097	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-13	TARGET-30-PAICGF-10A-01W Solexa-24418 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613FJAAXX100413.8.C310.6258_3254-N.3.bam	SRR331797	@dbgap@:reads/SRP012002/SRS083615/SRX092097/SRR331797/SRR331797.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAIFCS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIFCS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIFCS-01A-01W	DNA	EFO	SRS255475	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAIFCS-01A-01W Solexa-24434 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	35.493	Solexa-24434	SRX091449	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-09	TARGET-30-PAIFCS-01A-01W Solexa-24434 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613TEAAXX100409.7.C310.6258_3355-T.3.bam	SRR330379	@dbgap@:reads/SRP012002/SRS255475/SRX091449/SRR330379/SRR330379.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAIFCS.seg.txt	3
TARGET-30-PAIFCS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIFCS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIFCS-10A-01W	DNA	EFO	SRS083621	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAIFCS-10A-01W Solexa-24422 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	46.071	Solexa-24422	SRX091446	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-09	TARGET-30-PAIFCS-10A-01W Solexa-24422 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613TEAAXX100409.8.C310.6258_3355-N.4.bam	SRR330376	@dbgap@:reads/SRP012002/SRS083621/SRX091446/SRR330376/SRR330376.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAIFCS.seg.txt	3
TARGET-30-PAIFXV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIFXV-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIFXV-01A-01D	DNA	EFO	SRS379643		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAIFXV-01A-01D Catch-131289 library	PAIRED	GENOMIC	WXS	Hybrid Selection	143	69.4569605555556	Catch-131289	SRX210026	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PAIFXV-01A-01D Catch-131289 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.8.ATTCTAGG.C829.TARGET-30-PAIFXV-01A-01D.3.bam	SRR633138	@dbgap@:reads/SRP012002/SRS379643/SRX210026/SRR633138/SRR633138.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAIFXV.seg.txt	3
TARGET-30-PAIFXV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIFXV-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIFXV-01A-01D	DNA	EFO	SRS379643		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAIFXV-01A-01D Catch-131289 library	PAIRED	GENOMIC	WXS	Hybrid Selection	143	69.4569605555556	Catch-131289	SRX210026	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PAIFXV-01A-01D Catch-131289 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.8.ATTCTAGG.C829.TARGET-30-PAIFXV-01A-01D.3.bam	SRR633138	@dbgap@:reads/SRP012002/SRS379643/SRX210026/SRR633138/SRR633138.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAIFXV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIFXV-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIFXV-10A-01D	DNA	EFO	SRS379870		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAIFXV-10A-01D Catch-131293 library	PAIRED	GENOMIC	WXS	Hybrid Selection	162	63.6102327777778	Catch-131293	SRX210531	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PAIFXV-10A-01D Catch-131293 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.6.TGCTGCTG.C829.TARGET-30-PAIFXV-10A-01D.3.bam	SRR632822	@dbgap@:reads/SRP012002/SRS379870/SRX210531/SRR632822/SRR632822.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAIFXV.seg.txt	3
TARGET-30-PAIFXV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIFXV-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIFXV-10A-01D	DNA	EFO	SRS379870		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAIFXV-10A-01D Catch-131293 library	PAIRED	GENOMIC	WXS	Hybrid Selection	162	63.6102327777778	Catch-131293	SRX210531	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PAIFXV-10A-01D Catch-131293 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.6.TGCTGCTG.C829.TARGET-30-PAIFXV-10A-01D.3.bam	SRR632822	@dbgap@:reads/SRP012002/SRS379870/SRX210531/SRR632822/SRR632822.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAILNU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAILNU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAILNU-01A-01W	DNA	EFO	SRS255473	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAILNU-01A-01W Solexa-24419 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	41.295	Solexa-24419	SRX091458	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-12	TARGET-30-PAILNU-01A-01W Solexa-24419 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613WHAAXX100412.7.C310.6258_3264-T.5.bam	SRR330388	@dbgap@:reads/SRP012002/SRS255473/SRX091458/SRR330388/SRR330388.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAILNU.seg.txt	3
TARGET-30-PAILNU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAILNU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAILNU-01A-01W	DNA	EFO	SRS255473	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAILNU-01A-01W Solexa-24419 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	41.295	Solexa-24419	SRX091458	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-12	TARGET-30-PAILNU-01A-01W Solexa-24419 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613WHAAXX100412.7.C310.6258_3264-T.5.bam	SRR330388	@dbgap@:reads/SRP012002/SRS255473/SRX091458/SRR330388/SRR330388.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAILNU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAILNU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAILNU-10A-01W	DNA	EFO	SRS083616	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAILNU-10A-01W Solexa-24420 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	39.964	Solexa-24420	SRX091452	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-12	TARGET-30-PAILNU-10A-01W Solexa-24420 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613WHAAXX100412.8.C310.6258_3264-N.5.bam	SRR330382	@dbgap@:reads/SRP012002/SRS083616/SRX091452/SRR330382/SRR330382.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAILNU.seg.txt	3
TARGET-30-PAILNU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAILNU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAILNU-10A-01W	DNA	EFO	SRS083616	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAILNU-10A-01W Solexa-24420 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	39.964	Solexa-24420	SRX091452	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-12	TARGET-30-PAILNU-10A-01W Solexa-24420 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613WHAAXX100412.8.C310.6258_3264-N.5.bam	SRR330382	@dbgap@:reads/SRP012002/SRS083616/SRX091452/SRR330382/SRR330382.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAIMDT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIMDT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIMDT-01A-01W	DNA	EFO	SRS255469	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAIMDT-01A-01W Solexa-39819 library	PAIRED	GENOMIC	WXS	Hybrid Selection	230	37.481	Solexa-39819	SRX092134	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-08-23	TARGET-30-PAIMDT-01A-01W Solexa-39819 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.8.0	broadinstitute.org:Protocol:WXS-ReadAlign:01	61RTHAAXX100823.1.C310.6258_3180-T.1.bam	SRR331777	@dbgap@:reads/SRP012002/SRS255469/SRX092134/SRR331777/SRR331777.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAIMDT.seg.txt	3
TARGET-30-PAIMDT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIMDT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIMDT-01A-01W	DNA	EFO	SRS255469	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAIMDT-01A-01W Solexa-39819 library	PAIRED	GENOMIC	WXS	Hybrid Selection	230	37.481	Solexa-39819	SRX092134	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-08-23	TARGET-30-PAIMDT-01A-01W Solexa-39819 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.8.0	broadinstitute.org:Protocol:WXS-ReadAlign:01	61RTHAAXX100823.1.C310.6258_3180-T.1.bam	SRR331777	@dbgap@:reads/SRP012002/SRS255469/SRX092134/SRR331777/SRR331777.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAIMDT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIMDT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIMDT-10A-01W	DNA	EFO	SRS083610	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAIMDT-10A-01W Solexa-39857 library	PAIRED	GENOMIC	WXS	Hybrid Selection	230	39.6875	Solexa-39857	SRX091369	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-08-19	TARGET-30-PAIMDT-10A-01W Solexa-39857 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.8.0	broadinstitute.org:Protocol:WXS-ReadAlign:01	618H0AAXX100819.3.C310.6258_3180-N.2.bam	SRR330158	@dbgap@:reads/SRP012002/SRS083610/SRX091369/SRR330158/SRR330158.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAIMDT.seg.txt	3
TARGET-30-PAIMDT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIMDT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIMDT-10A-01W	DNA	EFO	SRS083610	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAIMDT-10A-01W Solexa-39857 library	PAIRED	GENOMIC	WXS	Hybrid Selection	230	39.6875	Solexa-39857	SRX091369	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-08-19	TARGET-30-PAIMDT-10A-01W Solexa-39857 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.8.0	broadinstitute.org:Protocol:WXS-ReadAlign:01	618H0AAXX100819.3.C310.6258_3180-N.2.bam	SRR330158	@dbgap@:reads/SRP012002/SRS083610/SRX091369/SRR330158/SRR330158.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAINLN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAINLN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAINLN-01A-01W	DNA	EFO	SRS255474	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAINLN-01A-01W Solexa-24361 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	42.796	Solexa-24361	SRX092100	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-13	TARGET-30-PAINLN-01A-01W Solexa-24361 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613FHAAXX100413.7.C310.6258_3270-T.4.bam	SRR331800	@dbgap@:reads/SRP012002/SRS255474/SRX092100/SRR331800/SRR331800.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAINLN.seg.txt	3
TARGET-30-PAINLN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAINLN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAINLN-01A-01W	DNA	EFO	SRS255474	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAINLN-01A-01W Solexa-24361 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	42.796	Solexa-24361	SRX092100	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-13	TARGET-30-PAINLN-01A-01W Solexa-24361 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613FHAAXX100413.7.C310.6258_3270-T.4.bam	SRR331800	@dbgap@:reads/SRP012002/SRS255474/SRX092100/SRR331800/SRR331800.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAINLN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAINLN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAINLN-10A-01W	DNA	EFO	SRS083617	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAINLN-10A-01W Solexa-24421 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	41.93	Solexa-24421	SRX092088	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-13	TARGET-30-PAINLN-10A-01W Solexa-24421 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613FHAAXX100413.8.C310.6258_3270-N.3.bam	SRR331788	@dbgap@:reads/SRP012002/SRS083617/SRX092088/SRR331788/SRR331788.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAINLN.seg.txt	3
TARGET-30-PAINLN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAINLN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAINLN-10A-01W	DNA	EFO	SRS083617	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAINLN-10A-01W Solexa-24421 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	41.93	Solexa-24421	SRX092088	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-13	TARGET-30-PAINLN-10A-01W Solexa-24421 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613FHAAXX100413.8.C310.6258_3270-N.3.bam	SRR331788	@dbgap@:reads/SRP012002/SRS083617/SRX092088/SRR331788/SRR331788.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAIPGU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIPGU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIPGU-01A-01W	DNA	EFO	SRS255470	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAIPGU-01A-01W Solexa-24351 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	42.267	Solexa-24351	SRX091378	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-09	TARGET-30-PAIPGU-01A-01W Solexa-24351 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613YVAAXX100409.7.C310.6258_3186-T.3.bam	SRR330295	@dbgap@:reads/SRP012002/SRS255470/SRX091378/SRR330295/SRR330295.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAIPGU.seg.txt	3
TARGET-30-PAIPGU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIPGU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIPGU-01A-01W	DNA	EFO	SRS255470	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAIPGU-01A-01W Solexa-24351 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	42.267	Solexa-24351	SRX091378	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-09	TARGET-30-PAIPGU-01A-01W Solexa-24351 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613YVAAXX100409.7.C310.6258_3186-T.3.bam	SRR330295	@dbgap@:reads/SRP012002/SRS255470/SRX091378/SRR330295/SRR330295.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAIPGU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIPGU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIPGU-10A-01W	DNA	EFO	SRS083611	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAIPGU-10A-01W Solexa-24432 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	44.576	Solexa-24432	SRX091387	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-09	TARGET-30-PAIPGU-10A-01W Solexa-24432 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613YVAAXX100409.8.C310.6258_3186-N.3.bam	SRR330304	@dbgap@:reads/SRP012002/SRS083611/SRX091387/SRR330304/SRR330304.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAIPGU.seg.txt	3
TARGET-30-PAIPGU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIPGU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIPGU-10A-01W	DNA	EFO	SRS083611	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAIPGU-10A-01W Solexa-24432 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	44.576	Solexa-24432	SRX091387	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-09	TARGET-30-PAIPGU-10A-01W Solexa-24432 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613YVAAXX100409.8.C310.6258_3186-N.3.bam	SRR330304	@dbgap@:reads/SRP012002/SRS083611/SRX091387/SRR330304/SRR330304.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAISSH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAISSH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAISSH-01A-01W	DNA	EFO	SRS255471	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAISSH-01A-01W Solexa-24415 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	42.879	Solexa-24415	SRX091390	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-21	TARGET-30-PAISSH-01A-01W Solexa-24415 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613Y9AAXX100421.7.C310.6258_3211-T.6.bam	SRR330307	@dbgap@:reads/SRP012002/SRS255471/SRX091390/SRR330307/SRR330307.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAISSH.seg.txt	3
TARGET-30-PAISSH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAISSH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAISSH-01A-01W	DNA	EFO	SRS255471	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAISSH-01A-01W Solexa-24415 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	42.879	Solexa-24415	SRX091390	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-21	TARGET-30-PAISSH-01A-01W Solexa-24415 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613Y9AAXX100421.7.C310.6258_3211-T.6.bam	SRR330307	@dbgap@:reads/SRP012002/SRS255471/SRX091390/SRR330307/SRR330307.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAISSH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAISSH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAISSH-10A-01W	DNA	EFO	SRS083614	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAISSH-10A-01W Solexa-24416 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	38.702	Solexa-24416	SRX091384	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-21	TARGET-30-PAISSH-10A-01W Solexa-24416 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613Y9AAXX100421.8.C310.6258_3211-N.5.bam	SRR330301	@dbgap@:reads/SRP012002/SRS083614/SRX091384/SRR330301/SRR330301.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAISSH.seg.txt	3
TARGET-30-PAISSH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAISSH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAISSH-10A-01W	DNA	EFO	SRS083614	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAISSH-10A-01W Solexa-24416 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	38.702	Solexa-24416	SRX091384	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-21	TARGET-30-PAISSH-10A-01W Solexa-24416 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613Y9AAXX100421.8.C310.6258_3211-N.5.bam	SRR330301	@dbgap@:reads/SRP012002/SRS083614/SRX091384/SRR330301/SRR330301.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAITCI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAITCI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAITCI-01A-01W	DNA	EFO	SRS083636	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAITCI-01A-01W Solexa-24440 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	38.356	Solexa-24440	SRX092073	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-09	TARGET-30-PAITCI-01A-01W Solexa-24440 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613T8AAXX100409.7.C310.6258_3671-T.4.bam	SRR331510	@dbgap@:reads/SRP012002/SRS083636/SRX092073/SRR331510/SRR331510.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAITCI.seg.txt	3
TARGET-30-PAITCI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAITCI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAITCI-01A-01W	DNA	EFO	SRS083636	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAITCI-01A-01W Solexa-24440 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	38.356	Solexa-24440	SRX092073	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-09	TARGET-30-PAITCI-01A-01W Solexa-24440 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613T8AAXX100409.7.C310.6258_3671-T.4.bam	SRR331510	@dbgap@:reads/SRP012002/SRS083636/SRX092073/SRR331510/SRR331510.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAITCI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAITCI-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAITCI-10A-01W	DNA	EFO	SRS083635	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAITCI-10A-01W Solexa-24441 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	36.628	Solexa-24441	SRX091417	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-09	TARGET-30-PAITCI-10A-01W Solexa-24441 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613T8AAXX100409.8.C310.6258_3671-N.5.bam	SRR330233	@dbgap@:reads/SRP012002/SRS083635/SRX091417/SRR330233/SRR330233.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAITCI.seg.txt	3
TARGET-30-PAITCI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAITCI-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAITCI-10A-01W	DNA	EFO	SRS083635	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAITCI-10A-01W Solexa-24441 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	36.628	Solexa-24441	SRX091417	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-09	TARGET-30-PAITCI-10A-01W Solexa-24441 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613T8AAXX100409.8.C310.6258_3671-N.5.bam	SRR330233	@dbgap@:reads/SRP012002/SRS083635/SRX091417/SRR330233/SRR330233.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAITEG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAITEG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAITEG-01A-01W	DNA	EFO	SRS083613	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAITEG-01A-01W Solexa-24433 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	40.701	Solexa-24433	SRX092136	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-07	TARGET-30-PAITEG-01A-01W Solexa-24433 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613WUAAXX100407.7.C310.6258_3204-T.5.bam	SRR331782	@dbgap@:reads/SRP012002/SRS083613/SRX092136/SRR331782/SRR331782.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAITEG.seg.txt	3
TARGET-30-PAITEG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAITEG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAITEG-01A-01W	DNA	EFO	SRS083613	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAITEG-01A-01W Solexa-24433 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	40.701	Solexa-24433	SRX092136	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-07	TARGET-30-PAITEG-01A-01W Solexa-24433 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613WUAAXX100407.7.C310.6258_3204-T.5.bam	SRR331782	@dbgap@:reads/SRP012002/SRS083613/SRX092136/SRR331782/SRR331782.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAITEG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAITEG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAITEG-10A-01W	DNA	EFO	SRS083612	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAITEG-10A-01W Solexa-24414 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	43.83	Solexa-24414	SRX092131	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-07	TARGET-30-PAITEG-10A-01W Solexa-24414 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613WUAAXX100407.8.C310.6258_3204-N.6.bam	SRR331774	@dbgap@:reads/SRP012002/SRS083612/SRX092131/SRR331774/SRR331774.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAITEG.seg.txt	3
TARGET-30-PAITEG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAITEG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAITEG-10A-01W	DNA	EFO	SRS083612	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAITEG-10A-01W Solexa-24414 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	43.83	Solexa-24414	SRX092131	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-07	TARGET-30-PAITEG-10A-01W Solexa-24414 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613WUAAXX100407.8.C310.6258_3204-N.6.bam	SRR331774	@dbgap@:reads/SRP012002/SRS083612/SRX092131/SRR331774/SRR331774.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAIVHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIVHE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIVHE-01A-01W	DNA	EFO	SRS083609	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAIVHE-01A-01W Solexa-24409 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	42.664	Solexa-24409	SRX091375	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-09	TARGET-30-PAIVHE-01A-01W Solexa-24409 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613TFAAXX100409.7.C310.6258_3160-T.4.bam	SRR330169	@dbgap@:reads/SRP012002/SRS083609/SRX091375/SRR330169/SRR330169.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAIVHE.seg.txt	3
TARGET-30-PAIVHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIVHE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIVHE-01A-01W	DNA	EFO	SRS083609	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAIVHE-01A-01W Solexa-24409 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	42.664	Solexa-24409	SRX091375	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-09	TARGET-30-PAIVHE-01A-01W Solexa-24409 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613TFAAXX100409.7.C310.6258_3160-T.4.bam	SRR330169	@dbgap@:reads/SRP012002/SRS083609/SRX091375/SRR330169/SRR330169.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAIVHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIVHE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIVHE-10A-01W	DNA	EFO	SRS083608	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAIVHE-10A-01W Solexa-24413 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	46.282	Solexa-24413	SRX091370	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-09	TARGET-30-PAIVHE-10A-01W Solexa-24413 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613TFAAXX100409.8.C310.6258_3160-N.5.bam	SRR330160	@dbgap@:reads/SRP012002/SRS083608/SRX091370/SRR330160/SRR330160.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAIVHE.seg.txt	3
TARGET-30-PAIVHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIVHE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIVHE-10A-01W	DNA	EFO	SRS083608	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAIVHE-10A-01W Solexa-24413 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	46.282	Solexa-24413	SRX091370	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-09	TARGET-30-PAIVHE-10A-01W Solexa-24413 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613TFAAXX100409.8.C310.6258_3160-N.5.bam	SRR330160	@dbgap@:reads/SRP012002/SRS083608/SRX091370/SRR330160/SRR330160.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAIWRB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIWRB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIWRB-01A-01D	DNA	EFO	SRS379642		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAIWRB-01A-01D Catch-131106 library	PAIRED	GENOMIC	WXS	Hybrid Selection	171	69.8891031818182	Catch-131106	SRX210022	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PAIWRB-01A-01D Catch-131106 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DF6ACXX120206.6.CTACCAGG.C829.TARGET-30-PAIWRB-01A-01D.1.bam	SRR632273	@dbgap@:reads/SRP012002/SRS379642/SRX210022/SRR632273/SRR632273.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAIWRB.seg.txt	3
TARGET-30-PAIWRB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIWRB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIWRB-01A-01D	DNA	EFO	SRS379642		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAIWRB-01A-01D Catch-131106 library	PAIRED	GENOMIC	WXS	Hybrid Selection	171	69.8891031818182	Catch-131106	SRX210022	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PAIWRB-01A-01D Catch-131106 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DF6ACXX120206.6.CTACCAGG.C829.TARGET-30-PAIWRB-01A-01D.1.bam	SRR632273	@dbgap@:reads/SRP012002/SRS379642/SRX210022/SRR632273/SRR632273.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAIWRB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIWRB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIWRB-10A-01D	DNA	EFO	SRS379566		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAIWRB-10A-01D Catch-131154 library	PAIRED	GENOMIC	WXS	Hybrid Selection	169	73.887825	Catch-131154	SRX209874	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-02	TARGET-30-PAIWRB-10A-01D Catch-131154 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0KW1ACXX120202.2.AGCAATTC.C829.TARGET-30-PAIWRB-10A-01D.1.bam	SRR631619	@dbgap@:reads/SRP012002/SRS379566/SRX209874/SRR631619/SRR631619.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAIWRB.seg.txt	3
TARGET-30-PAIWRB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIWRB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIWRB-10A-01D	DNA	EFO	SRS379566		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAIWRB-10A-01D Catch-131154 library	PAIRED	GENOMIC	WXS	Hybrid Selection	169	73.887825	Catch-131154	SRX209874	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-02	TARGET-30-PAIWRB-10A-01D Catch-131154 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0KW1ACXX120202.2.AGCAATTC.C829.TARGET-30-PAIWRB-10A-01D.1.bam	SRR631619	@dbgap@:reads/SRP012002/SRS379566/SRX209874/SRR631619/SRR631619.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAIXIF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIXIF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIXIF-01A-01W	DNA	EFO	SRS083137	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAIXIF-01A-01W Solexa-21810 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	37.7313333333333	Solexa-21810	SRX091484	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-03-11	TARGET-30-PAIXIF-01A-01W Solexa-21810 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.0a16	broadinstitute.org:Protocol:WXS-ReadAlign:01	61CCJAAXX100311.1.C310.6258_0038-T.2.bam	SRR330479	@dbgap@:reads/SRP012002/SRS083137/SRX091484/SRR330479/SRR330479.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAIXIF.seg.txt	3
TARGET-30-PAIXIF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIXIF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIXIF-01A-01W	DNA	EFO	SRS083137	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAIXIF-01A-01W Solexa-21810 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	37.7313333333333	Solexa-21810	SRX091484	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-03-11	TARGET-30-PAIXIF-01A-01W Solexa-21810 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.0a16	broadinstitute.org:Protocol:WXS-ReadAlign:01	61CCJAAXX100311.1.C310.6258_0038-T.2.bam	SRR330479	@dbgap@:reads/SRP012002/SRS083137/SRX091484/SRR330479/SRR330479.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAIXIF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIXIF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIXIF-10A-01W	DNA	EFO	SRS083136	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAIXIF-10A-01W Solexa-24546 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	40.591	Solexa-24546	SRX091301	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-06-29	TARGET-30-PAIXIF-10A-01W Solexa-24546 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.8.0	broadinstitute.org:Protocol:WXS-ReadAlign:01	61P79AAXX100629.6.C310.6258_0038-N.3.bam	SRR330433	@dbgap@:reads/SRP012002/SRS083136/SRX091301/SRR330433/SRR330433.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAIXIF.seg.txt	3
TARGET-30-PAIXIF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIXIF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIXIF-10A-01W	DNA	EFO	SRS083136	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAIXIF-10A-01W Solexa-24546 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	40.591	Solexa-24546	SRX091301	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-06-29	TARGET-30-PAIXIF-10A-01W Solexa-24546 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.8.0	broadinstitute.org:Protocol:WXS-ReadAlign:01	61P79AAXX100629.6.C310.6258_0038-N.3.bam	SRR330433	@dbgap@:reads/SRP012002/SRS083136/SRX091301/SRR330433/SRR330433.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAIXNC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIXNC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIXNC-01A-01W	DNA	EFO	SRS083141	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAIXNC-01A-01W Solexa-41756 library	PAIRED	GENOMIC	WXS	Hybrid Selection	230	51.209	Solexa-41756	SRX091302	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2010-08-30	TARGET-30-PAIXNC-01A-01W Solexa-41756 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.8.0	broadinstitute.org:Protocol:WXS-ReadAlign:01	203A4ABXX100830.8.C310.6258_0058-T.1.bam	SRR330436	@dbgap@:reads/SRP012002/SRS083141/SRX091302/SRR330436/SRR330436.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAIXNC.seg.txt	3
TARGET-30-PAIXNC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIXNC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIXNC-01A-01W	DNA	EFO	SRS083141	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAIXNC-01A-01W Solexa-41756 library	PAIRED	GENOMIC	WXS	Hybrid Selection	230	51.209	Solexa-41756	SRX091302	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2010-08-30	TARGET-30-PAIXNC-01A-01W Solexa-41756 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.8.0	broadinstitute.org:Protocol:WXS-ReadAlign:01	203A4ABXX100830.8.C310.6258_0058-T.1.bam	SRR330436	@dbgap@:reads/SRP012002/SRS083141/SRX091302/SRR330436/SRR330436.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAIXNC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIXNC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIXNC-10A-01W	DNA	EFO	SRS083140	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAIXNC-10A-01W Solexa-41736 library	PAIRED	GENOMIC	WXS	Hybrid Selection	230	51.171	Solexa-41736	SRX091298	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2010-08-30	TARGET-30-PAIXNC-10A-01W Solexa-41736 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.8.0	broadinstitute.org:Protocol:WXS-ReadAlign:01	203A4ABXX100830.3.C310.6258_0058-N.1.bam	SRR330427	@dbgap@:reads/SRP012002/SRS083140/SRX091298/SRR330427/SRR330427.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAIXNC.seg.txt	3
TARGET-30-PAIXNC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIXNC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIXNC-10A-01W	DNA	EFO	SRS083140	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAIXNC-10A-01W Solexa-41736 library	PAIRED	GENOMIC	WXS	Hybrid Selection	230	51.171	Solexa-41736	SRX091298	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2010-08-30	TARGET-30-PAIXNC-10A-01W Solexa-41736 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.8.0	broadinstitute.org:Protocol:WXS-ReadAlign:01	203A4ABXX100830.3.C310.6258_0058-N.1.bam	SRR330427	@dbgap@:reads/SRP012002/SRS083140/SRX091298/SRR330427/SRR330427.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAIXNV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIXNV-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIXNV-01A-01W	DNA	EFO	SRS083145	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAIXNV-01A-01W Solexa-39903 library	PAIRED	GENOMIC	WXS	Hybrid Selection	230	55.9195	Solexa-39903	SRX091483	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-08-24	TARGET-30-PAIXNV-01A-01W Solexa-39903 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.8.0	broadinstitute.org:Protocol:WXS-ReadAlign:01	61PCWAAXX100824.1.C310.6258_0061-T.1.bam	SRR330475	@dbgap@:reads/SRP012002/SRS083145/SRX091483/SRR330475/SRR330475.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAIXNV.seg.txt	3
TARGET-30-PAIXNV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIXNV-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIXNV-01A-01W	DNA	EFO	SRS083145	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAIXNV-01A-01W Solexa-39903 library	PAIRED	GENOMIC	WXS	Hybrid Selection	230	55.9195	Solexa-39903	SRX091483	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-08-24	TARGET-30-PAIXNV-01A-01W Solexa-39903 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.8.0	broadinstitute.org:Protocol:WXS-ReadAlign:01	61PCWAAXX100824.1.C310.6258_0061-T.1.bam	SRR330475	@dbgap@:reads/SRP012002/SRS083145/SRX091483/SRR330475/SRR330475.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAIXNV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIXNV-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIXNV-10A-01W	DNA	EFO	SRS083144	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAIXNV-10A-01W Solexa-39881 library	PAIRED	GENOMIC	WXS	Hybrid Selection	230	41.387	Solexa-39881	SRX091300	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-08-22	TARGET-30-PAIXNV-10A-01W Solexa-39881 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.8.0	broadinstitute.org:Protocol:WXS-ReadAlign:01	61PDEAAXX100822.3.C310.6258_0061-N.1.bam	SRR330431	@dbgap@:reads/SRP012002/SRS083144/SRX091300/SRR330431/SRR330431.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAIXNV.seg.txt	3
TARGET-30-PAIXNV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIXNV-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIXNV-10A-01W	DNA	EFO	SRS083144	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAIXNV-10A-01W Solexa-39881 library	PAIRED	GENOMIC	WXS	Hybrid Selection	230	41.387	Solexa-39881	SRX091300	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-08-22	TARGET-30-PAIXNV-10A-01W Solexa-39881 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.8.0	broadinstitute.org:Protocol:WXS-ReadAlign:01	61PDEAAXX100822.3.C310.6258_0061-N.1.bam	SRR330431	@dbgap@:reads/SRP012002/SRS083144/SRX091300/SRR330431/SRR330431.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAIXRK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIXRK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIXRK-01A-01W	DNA	EFO	SRS083147	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAIXRK-01A-01W Solexa-21837 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	37.012	Solexa-21837	SRX091485	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-03-11	TARGET-30-PAIXRK-01A-01W Solexa-21837 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.0a16	broadinstitute.org:Protocol:WXS-ReadAlign:01	61CCJAAXX100311.4.C310.6258_0072-T.2.bam	SRR330482	@dbgap@:reads/SRP012002/SRS083147/SRX091485/SRR330482/SRR330482.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAIXRK.seg.txt	3
TARGET-30-PAIXRK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIXRK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIXRK-01A-01W	DNA	EFO	SRS083147	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAIXRK-01A-01W Solexa-21837 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	37.012	Solexa-21837	SRX091485	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-03-11	TARGET-30-PAIXRK-01A-01W Solexa-21837 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.0a16	broadinstitute.org:Protocol:WXS-ReadAlign:01	61CCJAAXX100311.4.C310.6258_0072-T.2.bam	SRR330482	@dbgap@:reads/SRP012002/SRS083147/SRX091485/SRR330482/SRR330482.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAIXRK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIXRK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIXRK-10A-01W	DNA	EFO	SRS083146	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAIXRK-10A-01W Solexa-21849 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	39.1045	Solexa-21849	SRX091481	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-03-11	TARGET-30-PAIXRK-10A-01W Solexa-21849 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.0a16	broadinstitute.org:Protocol:WXS-ReadAlign:01	61CCJAAXX100311.7.C310.6258_0072-N.3.bam	SRR330472	@dbgap@:reads/SRP012002/SRS083146/SRX091481/SRR330472/SRR330472.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAIXRK.seg.txt	3
TARGET-30-PAIXRK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAIXRK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAIXRK-10A-01W	DNA	EFO	SRS083146	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAIXRK-10A-01W Solexa-21849 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	39.1045	Solexa-21849	SRX091481	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-03-11	TARGET-30-PAIXRK-10A-01W Solexa-21849 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.0a16	broadinstitute.org:Protocol:WXS-ReadAlign:01	61CCJAAXX100311.7.C310.6258_0072-N.3.bam	SRR330472	@dbgap@:reads/SRP012002/SRS083146/SRX091481/SRR330472/SRR330472.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAKFUY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAKFUY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAKFUY-01A-01W	DNA	EFO	SRS083171	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAKFUY-01A-01W Solexa-24608 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	40.8696666666667	Solexa-24608	SRX091293	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-06-29	TARGET-30-PAKFUY-01A-01W Solexa-24608 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.8.0	broadinstitute.org:Protocol:WXS-ReadAlign:01	618GWAAXX100629.1.C310.6258_0230-T.3.bam	SRR330447	@dbgap@:reads/SRP012002/SRS083171/SRX091293/SRR330447/SRR330447.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAKFUY.seg.txt	3
TARGET-30-PAKFUY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAKFUY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAKFUY-01A-01W	DNA	EFO	SRS083171	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAKFUY-01A-01W Solexa-24608 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	40.8696666666667	Solexa-24608	SRX091293	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-06-29	TARGET-30-PAKFUY-01A-01W Solexa-24608 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.8.0	broadinstitute.org:Protocol:WXS-ReadAlign:01	618GWAAXX100629.1.C310.6258_0230-T.3.bam	SRR330447	@dbgap@:reads/SRP012002/SRS083171/SRX091293/SRR330447/SRR330447.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAKFUY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAKFUY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAKFUY-10A-01W	DNA	EFO	SRS083170	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAKFUY-10A-01W Solexa-21884 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	40.263	Solexa-21884	SRX091488	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-03-16	TARGET-30-PAKFUY-10A-01W Solexa-21884 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.0a16	broadinstitute.org:Protocol:WXS-ReadAlign:01	61EN8AAXX100316.8.C310.6258_0230-N.2.bam	SRR331885	@dbgap@:reads/SRP012002/SRS083170/SRX091488/SRR331885/SRR331885.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAKFUY.seg.txt	3
TARGET-30-PAKFUY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAKFUY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAKFUY-10A-01W	DNA	EFO	SRS083170	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAKFUY-10A-01W Solexa-21884 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	40.263	Solexa-21884	SRX091488	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-03-16	TARGET-30-PAKFUY-10A-01W Solexa-21884 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.0a16	broadinstitute.org:Protocol:WXS-ReadAlign:01	61EN8AAXX100316.8.C310.6258_0230-N.2.bam	SRR331885	@dbgap@:reads/SRP012002/SRS083170/SRX091488/SRR331885/SRR331885.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAKGKH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAKGKH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAKGKH-01A-01W	DNA	EFO	SRS083161	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAKGKH-01A-01W Solexa-24607 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	40.0756666666667	Solexa-24607	SRX091295	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-09	TARGET-30-PAKGKH-01A-01W Solexa-24607 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613TFAAXX100409.1.C310.6258_0198-T.3.bam	SRR330453	@dbgap@:reads/SRP012002/SRS083161/SRX091295/SRR330453/SRR330453.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAKGKH.seg.txt	3
TARGET-30-PAKGKH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAKGKH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAKGKH-01A-01W	DNA	EFO	SRS083161	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAKGKH-01A-01W Solexa-24607 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	40.0756666666667	Solexa-24607	SRX091295	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-09	TARGET-30-PAKGKH-01A-01W Solexa-24607 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613TFAAXX100409.1.C310.6258_0198-T.3.bam	SRR330453	@dbgap@:reads/SRP012002/SRS083161/SRX091295/SRR330453/SRR330453.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAKGKH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAKGKH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAKGKH-10A-01W	DNA	EFO	SRS083160	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAKGKH-10A-01W Solexa-24558 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	40.8403333333333	Solexa-24558	SRX091294	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-09	TARGET-30-PAKGKH-10A-01W Solexa-24558 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613TFAAXX100409.4.C310.6258_0198-N.3.bam	SRR330450	@dbgap@:reads/SRP012002/SRS083160/SRX091294/SRR330450/SRR330450.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAKGKH.seg.txt	3
TARGET-30-PAKGKH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAKGKH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAKGKH-10A-01W	DNA	EFO	SRS083160	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAKGKH-10A-01W Solexa-24558 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	40.8403333333333	Solexa-24558	SRX091294	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-09	TARGET-30-PAKGKH-10A-01W Solexa-24558 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613TFAAXX100409.4.C310.6258_0198-N.3.bam	SRR330450	@dbgap@:reads/SRP012002/SRS083160/SRX091294/SRR330450/SRR330450.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAKHCF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAKHCF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAKHCF-01A-01W	DNA	EFO	SRS083173	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAKHCF-01A-01W Solexa-21802 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	39.8813333333333	Solexa-21802	SRX091291	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-03-16	TARGET-30-PAKHCF-01A-01W Solexa-21802 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.0a16	broadinstitute.org:Protocol:WXS-ReadAlign:01	61EPYAAXX100316.3.C310.6258_0232-T.2.bam	SRR330093	@dbgap@:reads/SRP012002/SRS083173/SRX091291/SRR330093/SRR330093.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAKHCF.seg.txt	3
TARGET-30-PAKHCF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAKHCF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAKHCF-01A-01W	DNA	EFO	SRS083173	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAKHCF-01A-01W Solexa-21802 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	39.8813333333333	Solexa-21802	SRX091291	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-03-16	TARGET-30-PAKHCF-01A-01W Solexa-21802 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.0a16	broadinstitute.org:Protocol:WXS-ReadAlign:01	61EPYAAXX100316.3.C310.6258_0232-T.2.bam	SRR330093	@dbgap@:reads/SRP012002/SRS083173/SRX091291/SRR330093/SRR330093.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAKHCF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAKHCF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAKHCF-10A-01W	DNA	EFO	SRS083172	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAKHCF-10A-01W Solexa-24559 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	36.9573333333333	Solexa-24559	SRX091288	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-06-29	TARGET-30-PAKHCF-10A-01W Solexa-24559 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.8.0	broadinstitute.org:Protocol:WXS-ReadAlign:01	618GWAAXX100629.4.C310.6258_0232-N.5.bam	SRR330085	@dbgap@:reads/SRP012002/SRS083172/SRX091288/SRR330085/SRR330085.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAKHCF.seg.txt	3
TARGET-30-PAKHCF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAKHCF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAKHCF-10A-01W	DNA	EFO	SRS083172	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAKHCF-10A-01W Solexa-24559 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	36.9573333333333	Solexa-24559	SRX091288	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-06-29	TARGET-30-PAKHCF-10A-01W Solexa-24559 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.8.0	broadinstitute.org:Protocol:WXS-ReadAlign:01	618GWAAXX100629.4.C310.6258_0232-N.5.bam	SRR330085	@dbgap@:reads/SRP012002/SRS083172/SRX091288/SRR330085/SRR330085.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAKHHB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAKHHB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAKHHB-01A-01W	DNA	EFO	SRS083159	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAKHHB-01A-01W Solexa-24605 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	39.022	Solexa-24605	SRX091486	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-08	TARGET-30-PAKHHB-01A-01W Solexa-24605 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	61E30AAXX100408.1.C310.6258_0192-T.2.bam	SRR331879	@dbgap@:reads/SRP012002/SRS083159/SRX091486/SRR331879/SRR331879.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAKHHB.seg.txt	3
TARGET-30-PAKHHB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAKHHB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAKHHB-01A-01W	DNA	EFO	SRS083159	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAKHHB-01A-01W Solexa-24605 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	39.022	Solexa-24605	SRX091486	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-08	TARGET-30-PAKHHB-01A-01W Solexa-24605 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	61E30AAXX100408.1.C310.6258_0192-T.2.bam	SRR331879	@dbgap@:reads/SRP012002/SRS083159/SRX091486/SRR331879/SRR331879.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAKHHB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAKHHB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAKHHB-10A-01W	DNA	EFO	SRS083158	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAKHHB-10A-01W Solexa-24606 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	41.501	Solexa-24606	SRX091296	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-08	TARGET-30-PAKHHB-10A-01W Solexa-24606 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	61E30AAXX100408.4.C310.6258_0192-N.2.bam	SRR330456	@dbgap@:reads/SRP012002/SRS083158/SRX091296/SRR330456/SRR330456.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAKHHB.seg.txt	3
TARGET-30-PAKHHB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAKHHB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAKHHB-10A-01W	DNA	EFO	SRS083158	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAKHHB-10A-01W Solexa-24606 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	41.501	Solexa-24606	SRX091296	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-08	TARGET-30-PAKHHB-10A-01W Solexa-24606 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	61E30AAXX100408.4.C310.6258_0192-N.2.bam	SRR330456	@dbgap@:reads/SRP012002/SRS083158/SRX091296/SRR330456/SRR330456.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAKIPY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAKIPY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAKIPY-01A-01W	DNA	EFO	SRS083151	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAKIPY-01A-01W Solexa-24603 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	40.1303333333333	Solexa-24603	SRX091491	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-08	TARGET-30-PAKIPY-01A-01W Solexa-24603 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	61572AAXX100408.1.C310.6258_0153-T.3.bam	SRR331891	@dbgap@:reads/SRP012002/SRS083151/SRX091491/SRR331891/SRR331891.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAKIPY.seg.txt	3
TARGET-30-PAKIPY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAKIPY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAKIPY-10A-01W	DNA	EFO	SRS083150	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAKIPY-10A-01W Solexa-24604 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	40.0643333333333	Solexa-24604	SRX091480	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-08	TARGET-30-PAKIPY-10A-01W Solexa-24604 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	61572AAXX100408.4.C310.6258_0153-N.2.bam	SRR330469	@dbgap@:reads/SRP012002/SRS083150/SRX091480/SRR330469/SRR330469.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAKIPY.seg.txt	3
TARGET-30-PAKJRE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAKJRE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAKJRE-01A-01W	DNA	EFO	SRS083149	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAKJRE-01A-01W Solexa-21861 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	40.6563333333333	Solexa-21861	SRX091297	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-03-16	TARGET-30-PAKJRE-01A-01W Solexa-21861 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.0a16	broadinstitute.org:Protocol:WXS-ReadAlign:01	61EN8AAXX100316.2.C310.6258_0121-T.2.bam	SRR330459	@dbgap@:reads/SRP012002/SRS083149/SRX091297/SRR330459/SRR330459.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAKJRE.seg.txt	3
TARGET-30-PAKJRE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAKJRE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAKJRE-01A-01W	DNA	EFO	SRS083149	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAKJRE-01A-01W Solexa-21861 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	40.6563333333333	Solexa-21861	SRX091297	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-03-16	TARGET-30-PAKJRE-01A-01W Solexa-21861 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.0a16	broadinstitute.org:Protocol:WXS-ReadAlign:01	61EN8AAXX100316.2.C310.6258_0121-T.2.bam	SRR330459	@dbgap@:reads/SRP012002/SRS083149/SRX091297/SRR330459/SRR330459.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAKJRE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAKJRE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAKJRE-10A-01W	DNA	EFO	SRS083148	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAKJRE-10A-01W Solexa-21873 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	39.6553333333333	Solexa-21873	SRX091299	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-03-16	TARGET-30-PAKJRE-10A-01W Solexa-21873 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.0a16	broadinstitute.org:Protocol:WXS-ReadAlign:01	61EN8AAXX100316.5.C310.6258_0121-N.2.bam	SRR330428	@dbgap@:reads/SRP012002/SRS083148/SRX091299/SRR330428/SRR330428.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAKJRE.seg.txt	3
TARGET-30-PAKJRE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAKJRE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAKJRE-10A-01W	DNA	EFO	SRS083148	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAKJRE-10A-01W Solexa-21873 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	39.6553333333333	Solexa-21873	SRX091299	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-03-16	TARGET-30-PAKJRE-10A-01W Solexa-21873 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.0a16	broadinstitute.org:Protocol:WXS-ReadAlign:01	61EN8AAXX100316.5.C310.6258_0121-N.2.bam	SRR330428	@dbgap@:reads/SRP012002/SRS083148/SRX091299/SRR330428/SRR330428.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAKVUY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAKVUY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAKVUY-01A-01D	DNA	EFO	SRS379565		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAKVUY-01A-01D Catch-131112 library	PAIRED	GENOMIC	WXS	Hybrid Selection	171	69.1864963636364	Catch-131112	SRX209867	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PAKVUY-01A-01D Catch-131112 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DF6ACXX120206.4.AACGCATT.C829.TARGET-30-PAKVUY-01A-01D.1.bam	SRR631541	@dbgap@:reads/SRP012002/SRS379565/SRX209867/SRR631541/SRR631541.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAKVUY.seg.txt	3
TARGET-30-PAKVUY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAKVUY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAKVUY-01A-01D	DNA	EFO	SRS379565		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAKVUY-01A-01D Catch-131112 library	PAIRED	GENOMIC	WXS	Hybrid Selection	171	69.1864963636364	Catch-131112	SRX209867	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PAKVUY-01A-01D Catch-131112 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DF6ACXX120206.4.AACGCATT.C829.TARGET-30-PAKVUY-01A-01D.1.bam	SRR631541	@dbgap@:reads/SRP012002/SRS379565/SRX209867/SRR631541/SRR631541.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAKVUY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAKVUY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAKVUY-10A-01D	DNA	EFO	SRS379630		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAKVUY-10A-01D Catch-131196 library	PAIRED	GENOMIC	WXS	Hybrid Selection	177	79.1246690909091	Catch-131196	SRX209970	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-02	TARGET-30-PAKVUY-10A-01D Catch-131196 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0KW1ACXX120202.5.TATCCAGG.C829.TARGET-30-PAKVUY-10A-01D.1.bam	SRR631983	@dbgap@:reads/SRP012002/SRS379630/SRX209970/SRR631983/SRR631983.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAKVUY.seg.txt	3
TARGET-30-PAKVUY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAKVUY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAKVUY-10A-01D	DNA	EFO	SRS379630		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAKVUY-10A-01D Catch-131196 library	PAIRED	GENOMIC	WXS	Hybrid Selection	177	79.1246690909091	Catch-131196	SRX209970	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-02	TARGET-30-PAKVUY-10A-01D Catch-131196 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0KW1ACXX120202.5.TATCCAGG.C829.TARGET-30-PAKVUY-10A-01D.1.bam	SRR631983	@dbgap@:reads/SRP012002/SRS379630/SRX209970/SRR631983/SRR631983.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAKXDZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAKXDZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAKXDZ-01A-01W	DNA	EFO	SRS083202	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAKXDZ-01A-01W Solexa-39832 library	PAIRED	GENOMIC	WXS	Hybrid Selection	230	38.715	Solexa-39832	SRX091289	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-08-18	TARGET-30-PAKXDZ-01A-01W Solexa-39832 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.8.0	broadinstitute.org:Protocol:WXS-ReadAlign:01	62578AAXX100818.1.C310.6258_0419-T.2.bam	SRR330088	@dbgap@:reads/SRP012002/SRS083202/SRX091289/SRR330088/SRR330088.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAKXDZ.seg.txt	3
TARGET-30-PAKXDZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAKXDZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAKXDZ-01A-01W	DNA	EFO	SRS083202	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAKXDZ-01A-01W Solexa-39832 library	PAIRED	GENOMIC	WXS	Hybrid Selection	230	38.715	Solexa-39832	SRX091289	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-08-18	TARGET-30-PAKXDZ-01A-01W Solexa-39832 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.8.0	broadinstitute.org:Protocol:WXS-ReadAlign:01	62578AAXX100818.1.C310.6258_0419-T.2.bam	SRR330088	@dbgap@:reads/SRP012002/SRS083202/SRX091289/SRR330088/SRR330088.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAKXDZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAKXDZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAKXDZ-10A-01W	DNA	EFO	SRS083201	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAKXDZ-10A-01W Solexa-21814 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	40.528	Solexa-21814	SRX091487	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-03-16	TARGET-30-PAKXDZ-10A-01W Solexa-21814 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.0a16	broadinstitute.org:Protocol:WXS-ReadAlign:01	61EPYAAXX100316.6.C310.6258_0419-N.2.bam	SRR331882	@dbgap@:reads/SRP012002/SRS083201/SRX091487/SRR331882/SRR331882.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAKXDZ.seg.txt	3
TARGET-30-PAKXDZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAKXDZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAKXDZ-10A-01W	DNA	EFO	SRS083201	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAKXDZ-10A-01W Solexa-21814 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	40.528	Solexa-21814	SRX091487	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-03-16	TARGET-30-PAKXDZ-10A-01W Solexa-21814 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.0a16	broadinstitute.org:Protocol:WXS-ReadAlign:01	61EPYAAXX100316.6.C310.6258_0419-N.2.bam	SRR331882	@dbgap@:reads/SRP012002/SRS083201/SRX091487/SRR331882/SRR331882.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAKYZS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAKYZS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAKYZS-01A-01W	DNA	EFO	SRS083628	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAKYZS-01A-01W Solexa-24436 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	46.387	Solexa-24436	SRX092067	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-08	TARGET-30-PAKYZS-01A-01W Solexa-24436 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613UTAAXX100408.7.C310.6258_3440-T.5.bam	SRR331504	@dbgap@:reads/SRP012002/SRS083628/SRX092067/SRR331504/SRR331504.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAKYZS.seg.txt	3
TARGET-30-PAKYZS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAKYZS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAKYZS-01A-01W	DNA	EFO	SRS083628	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAKYZS-01A-01W Solexa-24436 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	46.387	Solexa-24436	SRX092067	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-08	TARGET-30-PAKYZS-01A-01W Solexa-24436 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613UTAAXX100408.7.C310.6258_3440-T.5.bam	SRR331504	@dbgap@:reads/SRP012002/SRS083628/SRX092067/SRR331504/SRR331504.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAKYZS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAKYZS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAKYZS-10A-01W	DNA	EFO	SRS083627	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAKYZS-10A-01W Solexa-24437 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	39.13	Solexa-24437	SRX092091	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-08	TARGET-30-PAKYZS-10A-01W Solexa-24437 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613UTAAXX100408.8.C310.6258_3440-N.5.bam	SRR331791	@dbgap@:reads/SRP012002/SRS083627/SRX092091/SRR331791/SRR331791.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAKYZS.seg.txt	3
TARGET-30-PAKYZS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAKYZS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAKYZS-10A-01W	DNA	EFO	SRS083627	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAKYZS-10A-01W Solexa-24437 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	39.13	Solexa-24437	SRX092091	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-08	TARGET-30-PAKYZS-10A-01W Solexa-24437 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613UTAAXX100408.8.C310.6258_3440-N.5.bam	SRR331791	@dbgap@:reads/SRP012002/SRS083627/SRX092091/SRR331791/SRR331791.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAKZRE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAKZRE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAKZRE-01A-01W	DNA	EFO	SRS083204	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAKZRE-01A-01W Solexa-21826 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	39.2556666666667	Solexa-21826	SRX091290	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-03-16	TARGET-30-PAKZRE-01A-01W Solexa-21826 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.0a16	broadinstitute.org:Protocol:WXS-ReadAlign:01	616A5AAXX100316.1.C310.6258_0433-T.2.bam	SRR330090	@dbgap@:reads/SRP012002/SRS083204/SRX091290/SRR330090/SRR330090.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAKZRE.seg.txt	3
TARGET-30-PAKZRE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAKZRE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAKZRE-01A-01W	DNA	EFO	SRS083204	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAKZRE-01A-01W Solexa-21826 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	39.2556666666667	Solexa-21826	SRX091290	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-03-16	TARGET-30-PAKZRE-01A-01W Solexa-21826 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.0a16	broadinstitute.org:Protocol:WXS-ReadAlign:01	616A5AAXX100316.1.C310.6258_0433-T.2.bam	SRR330090	@dbgap@:reads/SRP012002/SRS083204/SRX091290/SRR330090/SRR330090.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAKZRE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAKZRE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAKZRE-10A-01W	DNA	EFO	SRS083203	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAKZRE-10A-01W Solexa-21838 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	39.9543333333333	Solexa-21838	SRX091292	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-03-16	TARGET-30-PAKZRE-10A-01W Solexa-21838 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.0a16	broadinstitute.org:Protocol:WXS-ReadAlign:01	616A5AAXX100316.4.C310.6258_0433-N.2.bam	SRR330096	@dbgap@:reads/SRP012002/SRS083203/SRX091292/SRR330096/SRR330096.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAKZRE.seg.txt	3
TARGET-30-PAKZRE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAKZRE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAKZRE-10A-01W	DNA	EFO	SRS083203	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAKZRE-10A-01W Solexa-21838 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	39.9543333333333	Solexa-21838	SRX091292	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-03-16	TARGET-30-PAKZRE-10A-01W Solexa-21838 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.0a16	broadinstitute.org:Protocol:WXS-ReadAlign:01	616A5AAXX100316.4.C310.6258_0433-N.2.bam	SRR330096	@dbgap@:reads/SRP012002/SRS083203/SRX091292/SRR330096/SRR330096.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAKZRF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAKZRF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAKZRF-01A-01W	DNA	EFO	SRS083207	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAKZRF-01A-01W Solexa-24560 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	40.014	Solexa-24560	SRX091490	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-09	TARGET-30-PAKZRF-01A-01W Solexa-24560 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613YVAAXX100409.1.C310.6258_0445-T.2.bam	SRR331888	@dbgap@:reads/SRP012002/SRS083207/SRX091490/SRR331888/SRR331888.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAKZRF.seg.txt	3
TARGET-30-PAKZRF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAKZRF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAKZRF-01A-01W	DNA	EFO	SRS083207	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAKZRF-01A-01W Solexa-24560 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	40.014	Solexa-24560	SRX091490	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-09	TARGET-30-PAKZRF-01A-01W Solexa-24560 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613YVAAXX100409.1.C310.6258_0445-T.2.bam	SRR331888	@dbgap@:reads/SRP012002/SRS083207/SRX091490/SRR331888/SRR331888.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAKZRF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAKZRF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAKZRF-10A-01W	DNA	EFO	SRS083206	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAKZRF-10A-01W Solexa-24561 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	41.2806666666667	Solexa-24561	SRX091327	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-09	TARGET-30-PAKZRF-10A-01W Solexa-24561 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613YVAAXX100409.4.C310.6258_0445-N.3.bam	SRR330242	@dbgap@:reads/SRP012002/SRS083206/SRX091327/SRR330242/SRR330242.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAKZRF.seg.txt	3
TARGET-30-PAKZRF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAKZRF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAKZRF-10A-01W	DNA	EFO	SRS083206	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAKZRF-10A-01W Solexa-24561 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	41.2806666666667	Solexa-24561	SRX091327	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-09	TARGET-30-PAKZRF-10A-01W Solexa-24561 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613YVAAXX100409.4.C310.6258_0445-N.3.bam	SRR330242	@dbgap@:reads/SRP012002/SRS083206/SRX091327/SRR330242/SRR330242.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PALAKE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALAKE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALAKE-01A-01W	DNA	EFO	SRS083211	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALAKE-01A-01W Solexa-21850 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	40.0345	Solexa-21850	SRX091328	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-03-16	TARGET-30-PALAKE-01A-01W Solexa-21850 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.0a16	broadinstitute.org:Protocol:WXS-ReadAlign:01	616A5AAXX100316.7.C310.6258_0462-T.2.bam	SRR330245	@dbgap@:reads/SRP012002/SRS083211/SRX091328/SRR330245/SRR330245.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PALAKE.seg.txt	3
TARGET-30-PALAKE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALAKE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALAKE-01A-01W	DNA	EFO	SRS083211	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALAKE-01A-01W Solexa-21850 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	40.0345	Solexa-21850	SRX091328	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-03-16	TARGET-30-PALAKE-01A-01W Solexa-21850 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.0a16	broadinstitute.org:Protocol:WXS-ReadAlign:01	616A5AAXX100316.7.C310.6258_0462-T.2.bam	SRR330245	@dbgap@:reads/SRP012002/SRS083211/SRX091328/SRR330245/SRR330245.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PALAKE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALAKE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALAKE-10A-01W	DNA	EFO	SRS083210	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALAKE-10A-01W Solexa-24562 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	42.163	Solexa-24562	SRX091330	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-06-29	TARGET-30-PALAKE-10A-01W Solexa-24562 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.8.0	broadinstitute.org:Protocol:WXS-ReadAlign:01	618GWAAXX100629.7.C310.6258_0462-N.5.bam	SRR330248	@dbgap@:reads/SRP012002/SRS083210/SRX091330/SRR330248/SRR330248.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PALAKE.seg.txt	3
TARGET-30-PALAKE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALAKE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALAKE-10A-01W	DNA	EFO	SRS083210	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALAKE-10A-01W Solexa-24562 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	42.163	Solexa-24562	SRX091330	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-06-29	TARGET-30-PALAKE-10A-01W Solexa-24562 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.8.0	broadinstitute.org:Protocol:WXS-ReadAlign:01	618GWAAXX100629.7.C310.6258_0462-N.5.bam	SRR330248	@dbgap@:reads/SRP012002/SRS083210/SRX091330/SRR330248/SRR330248.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PALAKM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALAKM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALAKM-01A-01W	DNA	EFO	SRS083214	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALAKM-01A-01W Solexa-21862 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	37.9396666666667	Solexa-21862	SRX091326	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-03-16	TARGET-30-PALAKM-01A-01W Solexa-21862 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.0a16	broadinstitute.org:Protocol:WXS-ReadAlign:01	617GYAAXX100316.2.C310.6258_0478-T.2.bam	SRR330239	@dbgap@:reads/SRP012002/SRS083214/SRX091326/SRR330239/SRR330239.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PALAKM.seg.txt	3
TARGET-30-PALAKM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALAKM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALAKM-01A-01W	DNA	EFO	SRS083214	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALAKM-01A-01W Solexa-21862 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	37.9396666666667	Solexa-21862	SRX091326	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-03-16	TARGET-30-PALAKM-01A-01W Solexa-21862 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.0a16	broadinstitute.org:Protocol:WXS-ReadAlign:01	617GYAAXX100316.2.C310.6258_0478-T.2.bam	SRR330239	@dbgap@:reads/SRP012002/SRS083214/SRX091326/SRR330239/SRR330239.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PALAKM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALAKM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALAKM-10A-01W	DNA	EFO	SRS083213	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALAKM-10A-01W Solexa-24617 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	38.8246666666667	Solexa-24617	SRX091325	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-06-29	TARGET-30-PALAKM-10A-01W Solexa-24617 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.8.0	broadinstitute.org:Protocol:WXS-ReadAlign:01	61P7FAAXX100629.2.C310.6258_0478-N.2.bam	SRR330236	@dbgap@:reads/SRP012002/SRS083213/SRX091325/SRR330236/SRR330236.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PALAKM.seg.txt	3
TARGET-30-PALAKM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALAKM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALAKM-10A-01W	DNA	EFO	SRS083213	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALAKM-10A-01W Solexa-24617 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	38.8246666666667	Solexa-24617	SRX091325	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-06-29	TARGET-30-PALAKM-10A-01W Solexa-24617 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.8.0	broadinstitute.org:Protocol:WXS-ReadAlign:01	61P7FAAXX100629.2.C310.6258_0478-N.2.bam	SRR330236	@dbgap@:reads/SRP012002/SRS083213/SRX091325/SRR330236/SRR330236.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PALBFW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALBFW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALBFW-01A-01W	DNA	EFO	SRS083218	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALBFW-01A-01W Solexa-39842 library	PAIRED	GENOMIC	WXS	Hybrid Selection	133	47.59086	Solexa-39842	SRX212209	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-08-18	TARGET-30-PALBFW-01A-01W Solexa-39842 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.8.0	broadinstitute.org:Protocol:WXS-ReadAlign:01	62578AAXX100818.4.C310.6258_0495-T.9.bam	SRR639138	@dbgap@:reads/SRP012002/SRS083218/SRX212209/SRR639138/SRR639138.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PALBFW.seg.txt	3
TARGET-30-PALBFW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALBFW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALBFW-01A-01W	DNA	EFO	SRS083218	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALBFW-01A-01W Solexa-39842 library	PAIRED	GENOMIC	WXS	Hybrid Selection	133	47.59086	Solexa-39842	SRX212209	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-08-18	TARGET-30-PALBFW-01A-01W Solexa-39842 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.8.0	broadinstitute.org:Protocol:WXS-ReadAlign:01	62578AAXX100818.4.C310.6258_0495-T.9.bam	SRR639138	@dbgap@:reads/SRP012002/SRS083218/SRX212209/SRR639138/SRR639138.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PALBFW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALBFW-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALBFW-10A-01W	DNA	EFO	SRS083217	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALBFW-10A-01W Solexa-39830 library	PAIRED	GENOMIC	WXS	Hybrid Selection	130	44.6224466666667	Solexa-39830	SRX210322	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-08-17	TARGET-30-PALBFW-10A-01W Solexa-39830 run	sequencing assay	EFO	171	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.8.0	broadinstitute.org:Protocol:WXS-ReadAlign:01	62569AAXX100817.2.C310.6258_0495-N.9.bam	SRR633391	@dbgap@:reads/SRP012002/SRS083217/SRX210322/SRR633391/SRR633391.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PALBFW.seg.txt	3
TARGET-30-PALBFW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALBFW-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALBFW-10A-01W	DNA	EFO	SRS083217	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALBFW-10A-01W Solexa-39830 library	PAIRED	GENOMIC	WXS	Hybrid Selection	130	44.6224466666667	Solexa-39830	SRX210322	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-08-17	TARGET-30-PALBFW-10A-01W Solexa-39830 run	sequencing assay	EFO	171	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.8.0	broadinstitute.org:Protocol:WXS-ReadAlign:01	62569AAXX100817.2.C310.6258_0495-N.9.bam	SRR633391	@dbgap@:reads/SRP012002/SRS083217/SRX210322/SRR633391/SRR633391.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PALCBW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALCBW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALCBW-01A-01W	DNA	EFO	SRS083221	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALCBW-01A-01W Solexa-39844 library	PAIRED	GENOMIC	WXS	Hybrid Selection	230	38.955	Solexa-39844	SRX091426	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-08-23	TARGET-30-PALCBW-01A-01W Solexa-39844 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.8.0	broadinstitute.org:Protocol:WXS-ReadAlign:01	61RTHAAXX100823.3.C310.6258_0505-T.1.bam	SRR330408	@dbgap@:reads/SRP012002/SRS083221/SRX091426/SRR330408/SRR330408.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PALCBW.seg.txt	3
TARGET-30-PALCBW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALCBW-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALCBW-10A-01W	DNA	EFO	SRS083220	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALCBW-10A-01W Solexa-39869 library	PAIRED	GENOMIC	WXS	Hybrid Selection	230	40.5615	Solexa-39869	SRX091428	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-08-19	TARGET-30-PALCBW-10A-01W Solexa-39869 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.8.0	broadinstitute.org:Protocol:WXS-ReadAlign:01	618H0AAXX100819.5.C310.6258_0505-N.2.bam	SRR330413	@dbgap@:reads/SRP012002/SRS083220/SRX091428/SRR330413/SRR330413.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PALCBW.seg.txt	3
TARGET-30-PALETP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALETP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALETP-01A-01W	DNA	EFO	SRS083291	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALETP-01A-01W Solexa-24568 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	41.7523333333333	Solexa-24568	SRX091506	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-07	TARGET-30-PALETP-01A-01W Solexa-24568 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613WUAAXX100407.1.C310.6258_1042-T.2.bam	SRR331876	@dbgap@:reads/SRP012002/SRS083291/SRX091506/SRR331876/SRR331876.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PALETP.seg.txt	3
TARGET-30-PALETP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALETP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALETP-01A-01W	DNA	EFO	SRS083291	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALETP-01A-01W Solexa-24568 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	41.7523333333333	Solexa-24568	SRX091506	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-07	TARGET-30-PALETP-01A-01W Solexa-24568 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613WUAAXX100407.1.C310.6258_1042-T.2.bam	SRR331876	@dbgap@:reads/SRP012002/SRS083291/SRX091506/SRR331876/SRR331876.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PALETP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALETP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALETP-10A-01W	DNA	EFO	SRS083290	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALETP-10A-01W Solexa-24569 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	40.873	Solexa-24569	SRX091503	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-07	TARGET-30-PALETP-10A-01W Solexa-24569 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613WUAAXX100407.4.C310.6258_1042-N.4.bam	SRR331867	@dbgap@:reads/SRP012002/SRS083290/SRX091503/SRR331867/SRR331867.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PALETP.seg.txt	3
TARGET-30-PALETP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALETP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALETP-10A-01W	DNA	EFO	SRS083290	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALETP-10A-01W Solexa-24569 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	40.873	Solexa-24569	SRX091503	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-07	TARGET-30-PALETP-10A-01W Solexa-24569 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613WUAAXX100407.4.C310.6258_1042-N.4.bam	SRR331867	@dbgap@:reads/SRP012002/SRS083290/SRX091503/SRR331867/SRR331867.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PALEVG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALEVG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALEVG-01A-01W	DNA	EFO	SRS083631	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALEVG-01A-01W Solexa-24424 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	49.261	Solexa-24424	SRX091415	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-12	TARGET-30-PALEVG-01A-01W Solexa-24424 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	61JTWAAXX100412.1.C310.6258_3538-T.2.bam	SRR330228	@dbgap@:reads/SRP012002/SRS083631/SRX091415/SRR330228/SRR330228.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PALEVG.seg.txt	3
TARGET-30-PALEVG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALEVG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALEVG-01A-01W	DNA	EFO	SRS083631	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALEVG-01A-01W Solexa-24424 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	49.261	Solexa-24424	SRX091415	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-12	TARGET-30-PALEVG-01A-01W Solexa-24424 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	61JTWAAXX100412.1.C310.6258_3538-T.2.bam	SRR330228	@dbgap@:reads/SRP012002/SRS083631/SRX091415/SRR330228/SRR330228.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PALEVG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALEVG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALEVG-10A-01W	DNA	EFO	SRS083630	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALEVG-10A-01W Solexa-24425 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	42.506	Solexa-24425	SRX092066	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-12	TARGET-30-PALEVG-10A-01W Solexa-24425 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	61JTWAAXX100412.4.C310.6258_3538-N.2.bam	SRR331501	@dbgap@:reads/SRP012002/SRS083630/SRX092066/SRR331501/SRR331501.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PALEVG.seg.txt	3
TARGET-30-PALEVG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALEVG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALEVG-10A-01W	DNA	EFO	SRS083630	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALEVG-10A-01W Solexa-24425 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	42.506	Solexa-24425	SRX092066	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-12	TARGET-30-PALEVG-10A-01W Solexa-24425 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	61JTWAAXX100412.4.C310.6258_3538-N.2.bam	SRR331501	@dbgap@:reads/SRP012002/SRS083630/SRX092066/SRR331501/SRR331501.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PALFPI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALFPI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALFPI-01A-01W	DNA	EFO	SRS083296	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALFPI-01A-01W Solexa-24622 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	34.881	Solexa-24622	SRX091336	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-08	TARGET-30-PALFPI-01A-01W Solexa-24622 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	61JVGAAXX100408.1.C310.6258_1056-T.2.bam	SRR330260	@dbgap@:reads/SRP012002/SRS083296/SRX091336/SRR330260/SRR330260.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PALFPI.seg.txt	3
TARGET-30-PALFPI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALFPI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALFPI-01A-01W	DNA	EFO	SRS083296	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALFPI-01A-01W Solexa-24622 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	34.881	Solexa-24622	SRX091336	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-08	TARGET-30-PALFPI-01A-01W Solexa-24622 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	61JVGAAXX100408.1.C310.6258_1056-T.2.bam	SRR330260	@dbgap@:reads/SRP012002/SRS083296/SRX091336/SRR330260/SRR330260.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PALFPI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALFPI-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALFPI-10A-01W	DNA	EFO	SRS083295	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALFPI-10A-01W Solexa-24623 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	39.7076666666667	Solexa-24623	SRX091335	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-08	TARGET-30-PALFPI-10A-01W Solexa-24623 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	61JVGAAXX100408.4.C310.6258_1056-N.2.bam	SRR330257	@dbgap@:reads/SRP012002/SRS083295/SRX091335/SRR330257/SRR330257.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PALFPI.seg.txt	3
TARGET-30-PALFPI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALFPI-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALFPI-10A-01W	DNA	EFO	SRS083295	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALFPI-10A-01W Solexa-24623 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	39.7076666666667	Solexa-24623	SRX091335	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-08	TARGET-30-PALFPI-10A-01W Solexa-24623 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	61JVGAAXX100408.4.C310.6258_1056-N.2.bam	SRR330257	@dbgap@:reads/SRP012002/SRS083295/SRX091335/SRR330257/SRR330257.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PALHVD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALHVD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALHVD-01A-01W	DNA	EFO	SRS083309	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALHVD-01A-01W Solexa-24624 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	37.0553333333333	Solexa-24624	SRX091504	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-20	TARGET-30-PALHVD-01A-01W Solexa-24624 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	61JBVAAXX100420.1.C310.6258_1092-T.2.bam	SRR331870	@dbgap@:reads/SRP012002/SRS083309/SRX091504/SRR331870/SRR331870.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PALHVD.seg.txt	3
TARGET-30-PALHVD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALHVD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALHVD-01A-01W	DNA	EFO	SRS083309	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALHVD-01A-01W Solexa-24624 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	37.0553333333333	Solexa-24624	SRX091504	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-20	TARGET-30-PALHVD-01A-01W Solexa-24624 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	61JBVAAXX100420.1.C310.6258_1092-T.2.bam	SRR331870	@dbgap@:reads/SRP012002/SRS083309/SRX091504/SRR331870/SRR331870.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PALHVD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALHVD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALHVD-10A-01W	DNA	EFO	SRS083308	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALHVD-10A-01W Solexa-24625 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	39.0385	Solexa-24625	SRX091337	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-20	TARGET-30-PALHVD-10A-01W Solexa-24625 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	61JBVAAXX100420.4.C310.6258_1092-N.2.bam	SRR330263	@dbgap@:reads/SRP012002/SRS083308/SRX091337/SRR330263/SRR330263.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PALHVD.seg.txt	3
TARGET-30-PALHVD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALHVD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALHVD-10A-01W	DNA	EFO	SRS083308	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALHVD-10A-01W Solexa-24625 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	39.0385	Solexa-24625	SRX091337	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-20	TARGET-30-PALHVD-10A-01W Solexa-24625 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	61JBVAAXX100420.4.C310.6258_1092-N.2.bam	SRR330263	@dbgap@:reads/SRP012002/SRS083308/SRX091337/SRR330263/SRR330263.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PALIIN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALIIN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALIIN-01A-01W	DNA	EFO	SRS083311	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALIIN-01A-01W Solexa-24626 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	36.6843333333333	Solexa-24626	SRX091357	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-06-29	TARGET-30-PALIIN-01A-01W Solexa-24626 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.8.0	broadinstitute.org:Protocol:WXS-ReadAlign:01	61P7FAAXX100629.5.C310.6258_1100-T.2.bam	SRR330138	@dbgap@:reads/SRP012002/SRS083311/SRX091357/SRR330138/SRR330138.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PALIIN.seg.txt	3
TARGET-30-PALIIN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALIIN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALIIN-01A-01W	DNA	EFO	SRS083311	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALIIN-01A-01W Solexa-24626 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	36.6843333333333	Solexa-24626	SRX091357	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-06-29	TARGET-30-PALIIN-01A-01W Solexa-24626 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.8.0	broadinstitute.org:Protocol:WXS-ReadAlign:01	61P7FAAXX100629.5.C310.6258_1100-T.2.bam	SRR330138	@dbgap@:reads/SRP012002/SRS083311/SRX091357/SRR330138/SRR330138.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PALIIN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALIIN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALIIN-10A-01W	DNA	EFO	SRS083310	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALIIN-10A-01W Solexa-21851 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	39.597	Solexa-21851	SRX091332	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-03-16	TARGET-30-PALIIN-10A-01W Solexa-21851 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.0a16	broadinstitute.org:Protocol:WXS-ReadAlign:01	613HWAAXX100316.1.C310.6258_1100-N.3.bam	SRR330251	@dbgap@:reads/SRP012002/SRS083310/SRX091332/SRR330251/SRR330251.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PALIIN.seg.txt	3
TARGET-30-PALIIN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALIIN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALIIN-10A-01W	DNA	EFO	SRS083310	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALIIN-10A-01W Solexa-21851 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	39.597	Solexa-21851	SRX091332	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-03-16	TARGET-30-PALIIN-10A-01W Solexa-21851 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.0a16	broadinstitute.org:Protocol:WXS-ReadAlign:01	613HWAAXX100316.1.C310.6258_1100-N.3.bam	SRR330251	@dbgap@:reads/SRP012002/SRS083310/SRX091332/SRR330251/SRR330251.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PALJPX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALJPX-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALJPX-01A-01W	DNA	EFO	SRS083315	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALJPX-01A-01W Solexa-39820 library	PAIRED	GENOMIC	WXS	Hybrid Selection	230	38.9325	Solexa-39820	SRX091353	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-08-17	TARGET-30-PALJPX-01A-01W Solexa-39820 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.8.0	broadinstitute.org:Protocol:WXS-ReadAlign:01	62569AAXX100817.7.C310.6258_1110-T.2.bam	SRR330132	@dbgap@:reads/SRP012002/SRS083315/SRX091353/SRR330132/SRR330132.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PALJPX.seg.txt	3
TARGET-30-PALJPX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALJPX-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALJPX-01A-01W	DNA	EFO	SRS083315	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALJPX-01A-01W Solexa-39820 library	PAIRED	GENOMIC	WXS	Hybrid Selection	230	38.9325	Solexa-39820	SRX091353	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-08-17	TARGET-30-PALJPX-01A-01W Solexa-39820 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.8.0	broadinstitute.org:Protocol:WXS-ReadAlign:01	62569AAXX100817.7.C310.6258_1110-T.2.bam	SRR330132	@dbgap@:reads/SRP012002/SRS083315/SRX091353/SRR330132/SRR330132.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PALJPX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALJPX-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALJPX-10A-01W	DNA	EFO	SRS083314	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALJPX-10A-01W Solexa-21863 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	39.3666666666667	Solexa-21863	SRX091358	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-03-16	TARGET-30-PALJPX-10A-01W Solexa-21863 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.0a16	broadinstitute.org:Protocol:WXS-ReadAlign:01	613HWAAXX100316.2.C310.6258_1110-N.3.bam	SRR330141	@dbgap@:reads/SRP012002/SRS083314/SRX091358/SRR330141/SRR330141.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PALJPX.seg.txt	3
TARGET-30-PALJPX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALJPX-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALJPX-10A-01W	DNA	EFO	SRS083314	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALJPX-10A-01W Solexa-21863 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	39.3666666666667	Solexa-21863	SRX091358	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-03-16	TARGET-30-PALJPX-10A-01W Solexa-21863 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.0a16	broadinstitute.org:Protocol:WXS-ReadAlign:01	613HWAAXX100316.2.C310.6258_1110-N.3.bam	SRR330141	@dbgap@:reads/SRP012002/SRS083314/SRX091358/SRR330141/SRR330141.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PALJUV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALJUV-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALJUV-01A-01W	DNA	EFO	SRS083318	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALJUV-01A-01W Solexa-21875 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	39.4126666666667	Solexa-21875	SRX091363	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-03-16	TARGET-30-PALJUV-01A-01W Solexa-21875 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.0a16	broadinstitute.org:Protocol:WXS-ReadAlign:01	613HWAAXX100316.5.C310.6258_1112-T.2.bam	SRR330399	@dbgap@:reads/SRP012002/SRS083318/SRX091363/SRR330399/SRR330399.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PALJUV.seg.txt	3
TARGET-30-PALJUV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALJUV-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALJUV-01A-01W	DNA	EFO	SRS083318	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALJUV-01A-01W Solexa-21875 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	39.4126666666667	Solexa-21875	SRX091363	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-03-16	TARGET-30-PALJUV-01A-01W Solexa-21875 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.0a16	broadinstitute.org:Protocol:WXS-ReadAlign:01	613HWAAXX100316.5.C310.6258_1112-T.2.bam	SRR330399	@dbgap@:reads/SRP012002/SRS083318/SRX091363/SRR330399/SRR330399.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PALJUV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALJUV-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALJUV-10A-01W	DNA	EFO	SRS083317	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALJUV-10A-01W Solexa-24570 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	41.576	Solexa-24570	SRX091355	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-06-29	TARGET-30-PALJUV-10A-01W Solexa-24570 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.8.0	broadinstitute.org:Protocol:WXS-ReadAlign:01	61P7FAAXX100629.8.C310.6258_1112-N.4.bam	SRR330135	@dbgap@:reads/SRP012002/SRS083317/SRX091355/SRR330135/SRR330135.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PALJUV.seg.txt	3
TARGET-30-PALJUV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALJUV-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALJUV-10A-01W	DNA	EFO	SRS083317	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALJUV-10A-01W Solexa-24570 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	41.576	Solexa-24570	SRX091355	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-06-29	TARGET-30-PALJUV-10A-01W Solexa-24570 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.8.0	broadinstitute.org:Protocol:WXS-ReadAlign:01	61P7FAAXX100629.8.C310.6258_1112-N.4.bam	SRR330135	@dbgap@:reads/SRP012002/SRS083317/SRX091355/SRR330135/SRR330135.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PALNLU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALNLU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALNLU-01A-01W	DNA	EFO	SRS083334	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALNLU-01A-01W Solexa-21804 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	40.459	Solexa-21804	SRX092103	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-03-17	TARGET-30-PALNLU-01A-01W Solexa-21804 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.0a16	broadinstitute.org:Protocol:WXS-ReadAlign:01	613L7AAXX100317.6.C310.6258_1155-T.2.bam	SRR331537	@dbgap@:reads/SRP012002/SRS083334/SRX092103/SRR331537/SRR331537.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PALNLU.seg.txt	3
TARGET-30-PALNLU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALNLU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALNLU-01A-01W	DNA	EFO	SRS083334	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALNLU-01A-01W Solexa-21804 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	40.459	Solexa-21804	SRX092103	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-03-17	TARGET-30-PALNLU-01A-01W Solexa-21804 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.0a16	broadinstitute.org:Protocol:WXS-ReadAlign:01	613L7AAXX100317.6.C310.6258_1155-T.2.bam	SRR331537	@dbgap@:reads/SRP012002/SRS083334/SRX092103/SRR331537/SRR331537.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PALNLU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALNLU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALNLU-10A-01W	DNA	EFO	SRS255465	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALNLU-10A-01W Solexa-21798 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	40.504	Solexa-21798	SRX092107	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-03-17	TARGET-30-PALNLU-10A-01W Solexa-21798 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.0a16	broadinstitute.org:Protocol:WXS-ReadAlign:01	613L7AAXX100317.3.C310.6258_1155-N.2.bam	SRR331544	@dbgap@:reads/SRP012002/SRS255465/SRX092107/SRR331544/SRR331544.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PALNLU.seg.txt	3
TARGET-30-PALNLU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALNLU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALNLU-10A-01W	DNA	EFO	SRS255465	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALNLU-10A-01W Solexa-21798 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	40.504	Solexa-21798	SRX092107	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-03-17	TARGET-30-PALNLU-10A-01W Solexa-21798 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.0a16	broadinstitute.org:Protocol:WXS-ReadAlign:01	613L7AAXX100317.3.C310.6258_1155-N.2.bam	SRR331544	@dbgap@:reads/SRP012002/SRS255465/SRX092107/SRR331544/SRR331544.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PALPGG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALPGG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALPGG-01A-01W	DNA	EFO	SRS083649	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALPGG-01A-01W Solexa-24429 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	41.1876666666667	Solexa-24429	SRX091420	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-08	TARGET-30-PALPGG-01A-01W Solexa-24429 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613UTAAXX100408.1.C310.6258_3944-T.4.bam	SRR330310	@dbgap@:reads/SRP012002/SRS083649/SRX091420/SRR330310/SRR330310.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PALPGG.seg.txt	3
TARGET-30-PALPGG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALPGG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALPGG-01A-01W	DNA	EFO	SRS083649	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALPGG-01A-01W Solexa-24429 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	41.1876666666667	Solexa-24429	SRX091420	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-08	TARGET-30-PALPGG-01A-01W Solexa-24429 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613UTAAXX100408.1.C310.6258_3944-T.4.bam	SRR330310	@dbgap@:reads/SRP012002/SRS083649/SRX091420/SRR330310/SRR330310.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PALPGG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALPGG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALPGG-10A-01W	DNA	EFO	SRS083648	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALPGG-10A-01W Solexa-24430 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	41.7866666666667	Solexa-24430	SRX091422	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-08	TARGET-30-PALPGG-10A-01W Solexa-24430 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613UTAAXX100408.4.C310.6258_3944-N.3.bam	SRR330314	@dbgap@:reads/SRP012002/SRS083648/SRX091422/SRR330314/SRR330314.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PALPGG.seg.txt	3
TARGET-30-PALPGG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALPGG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALPGG-10A-01W	DNA	EFO	SRS083648	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALPGG-10A-01W Solexa-24430 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	41.7866666666667	Solexa-24430	SRX091422	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-08	TARGET-30-PALPGG-10A-01W Solexa-24430 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613UTAAXX100408.4.C310.6258_3944-N.3.bam	SRR330314	@dbgap@:reads/SRP012002/SRS083648/SRX091422/SRR330314/SRR330314.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PALRSD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALRSD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALRSD-01A-01D	DNA	EFO	SRS380209		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALRSD-01A-01D Catch-131143 library	PAIRED	GENOMIC	WXS	Hybrid Selection	156	62.5606440909091	Catch-131143	SRX211216	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PALRSD-01A-01D Catch-131143 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DF6ACXX120206.3.TTCGCTGA.C829.TARGET-30-PALRSD-01A-01D.1.bam	SRR636221	@dbgap@:reads/SRP012002/SRS380209/SRX211216/SRR636221/SRR636221.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PALRSD.seg.txt	3
TARGET-30-PALRSD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALRSD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALRSD-01A-01D	DNA	EFO	SRS380209		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALRSD-01A-01D Catch-131143 library	PAIRED	GENOMIC	WXS	Hybrid Selection	156	62.5606440909091	Catch-131143	SRX211216	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PALRSD-01A-01D Catch-131143 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DF6ACXX120206.3.TTCGCTGA.C829.TARGET-30-PALRSD-01A-01D.1.bam	SRR636221	@dbgap@:reads/SRP012002/SRS380209/SRX211216/SRR636221/SRR636221.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PALRSD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALRSD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALRSD-10A-01D	DNA	EFO	SRS380041		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALRSD-10A-01D Catch-131119 library	PAIRED	GENOMIC	WXS	Hybrid Selection	157	60.2672345454545	Catch-131119	SRX210794	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PALRSD-10A-01D Catch-131119 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DBMACXX120206.2.GGTCCAGA.C829.TARGET-30-PALRSD-10A-01D.1.bam	SRR634539	@dbgap@:reads/SRP012002/SRS380041/SRX210794/SRR634539/SRR634539.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PALRSD.seg.txt	3
TARGET-30-PALRSD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALRSD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALRSD-10A-01D	DNA	EFO	SRS380041		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALRSD-10A-01D Catch-131119 library	PAIRED	GENOMIC	WXS	Hybrid Selection	157	60.2672345454545	Catch-131119	SRX210794	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PALRSD-10A-01D Catch-131119 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DBMACXX120206.2.GGTCCAGA.C829.TARGET-30-PALRSD-10A-01D.1.bam	SRR634539	@dbgap@:reads/SRP012002/SRS380041/SRX210794/SRR634539/SRR634539.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PALSAE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALSAE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALSAE-01A-01W	DNA	EFO	SRS083347	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALSAE-01A-01W Solexa-39902 library	PAIRED	GENOMIC	WXS	Hybrid Selection	230	39.021	Solexa-39902	SRX091361	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-08-18	TARGET-30-PALSAE-01A-01W Solexa-39902 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.8.0	broadinstitute.org:Protocol:WXS-ReadAlign:01	62578AAXX100818.7.C310.6258_1181-T.3.bam	SRR330395	@dbgap@:reads/SRP012002/SRS083347/SRX091361/SRR330395/SRR330395.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PALSAE.seg.txt	3
TARGET-30-PALSAE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALSAE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALSAE-01A-01W	DNA	EFO	SRS083347	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALSAE-01A-01W Solexa-39902 library	PAIRED	GENOMIC	WXS	Hybrid Selection	230	39.021	Solexa-39902	SRX091361	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-08-18	TARGET-30-PALSAE-01A-01W Solexa-39902 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.8.0	broadinstitute.org:Protocol:WXS-ReadAlign:01	62578AAXX100818.7.C310.6258_1181-T.3.bam	SRR330395	@dbgap@:reads/SRP012002/SRS083347/SRX091361/SRR330395/SRR330395.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PALSAE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALSAE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALSAE-10A-01W	DNA	EFO	SRS083346	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALSAE-10A-01W Solexa-39829 library	PAIRED	GENOMIC	WXS	Hybrid Selection	230	36.7595	Solexa-39829	SRX091359	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-08-22	TARGET-30-PALSAE-10A-01W Solexa-39829 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.8.0	broadinstitute.org:Protocol:WXS-ReadAlign:01	61PDEAAXX100822.1.C310.6258_1181-N.1.bam	SRR330391	@dbgap@:reads/SRP012002/SRS083346/SRX091359/SRR330391/SRR330391.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PALSAE.seg.txt	3
TARGET-30-PALSAE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALSAE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALSAE-10A-01W	DNA	EFO	SRS083346	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALSAE-10A-01W Solexa-39829 library	PAIRED	GENOMIC	WXS	Hybrid Selection	230	36.7595	Solexa-39829	SRX091359	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-08-22	TARGET-30-PALSAE-10A-01W Solexa-39829 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.8.0	broadinstitute.org:Protocol:WXS-ReadAlign:01	61PDEAAXX100822.1.C310.6258_1181-N.1.bam	SRR330391	@dbgap@:reads/SRP012002/SRS083346/SRX091359/SRR330391/SRR330391.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PALTEG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALTEG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALTEG-01A-01W	DNA	EFO	SRS083349	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALTEG-01A-01W Solexa-41746 library	PAIRED	GENOMIC	WXS	Hybrid Selection	230	53.156	Solexa-41746	SRX092109	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2010-08-30	TARGET-30-PALTEG-01A-01W Solexa-41746 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.8.0	broadinstitute.org:Protocol:WXS-ReadAlign:01	203A4ABXX100830.6.C310.6258_1194-T.1.bam	SRR331747	@dbgap@:reads/SRP012002/SRS083349/SRX092109/SRR331747/SRR331747.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PALTEG.seg.txt	3
TARGET-30-PALTEG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALTEG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALTEG-01A-01W	DNA	EFO	SRS083349	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALTEG-01A-01W Solexa-41746 library	PAIRED	GENOMIC	WXS	Hybrid Selection	230	53.156	Solexa-41746	SRX092109	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2010-08-30	TARGET-30-PALTEG-01A-01W Solexa-41746 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.8.0	broadinstitute.org:Protocol:WXS-ReadAlign:01	203A4ABXX100830.6.C310.6258_1194-T.1.bam	SRR331747	@dbgap@:reads/SRP012002/SRS083349/SRX092109/SRR331747/SRR331747.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PALTEG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALTEG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALTEG-10A-01W	DNA	EFO	SRS083348	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALTEG-10A-01W Solexa-41741 library	PAIRED	GENOMIC	WXS	Hybrid Selection	230	49.134	Solexa-41741	SRX092111	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2010-08-30	TARGET-30-PALTEG-10A-01W Solexa-41741 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.8.0	broadinstitute.org:Protocol:WXS-ReadAlign:01	203A4ABXX100830.2.C310.6258_1194-N.3.bam	SRR331751	@dbgap@:reads/SRP012002/SRS083348/SRX092111/SRR331751/SRR331751.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PALTEG.seg.txt	3
TARGET-30-PALTEG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALTEG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALTEG-10A-01W	DNA	EFO	SRS083348	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALTEG-10A-01W Solexa-41741 library	PAIRED	GENOMIC	WXS	Hybrid Selection	230	49.134	Solexa-41741	SRX092111	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2010-08-30	TARGET-30-PALTEG-10A-01W Solexa-41741 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.8.0	broadinstitute.org:Protocol:WXS-ReadAlign:01	203A4ABXX100830.2.C310.6258_1194-N.3.bam	SRR331751	@dbgap@:reads/SRP012002/SRS083348/SRX092111/SRR331751/SRR331751.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PALTYB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALTYB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALTYB-01A-01W	DNA	EFO	SRS083353	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALTYB-01A-01W Solexa-39892 library	PAIRED	GENOMIC	WXS	Hybrid Selection	124	39.51351	Solexa-39892	SRX212204	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-08-19	TARGET-30-PALTYB-01A-01W Solexa-39892 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.8.0	broadinstitute.org:Protocol:WXS-ReadAlign:01	61PLMAAXX100819.8.C310.6258_1199-T.4.bam	SRR639103	@dbgap@:reads/SRP012002/SRS083353/SRX212204/SRR639103/SRR639103.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PALTYB.seg.txt	3
TARGET-30-PALTYB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALTYB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALTYB-01A-01W	DNA	EFO	SRS083353	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALTYB-01A-01W Solexa-39892 library	PAIRED	GENOMIC	WXS	Hybrid Selection	124	39.51351	Solexa-39892	SRX212204	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-08-19	TARGET-30-PALTYB-01A-01W Solexa-39892 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.8.0	broadinstitute.org:Protocol:WXS-ReadAlign:01	61PLMAAXX100819.8.C310.6258_1199-T.4.bam	SRR639103	@dbgap@:reads/SRP012002/SRS083353/SRX212204/SRR639103/SRR639103.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PALTYB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALTYB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALTYB-10A-01W	DNA	EFO	SRS083352	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALTYB-10A-01W Solexa-39846 library	PAIRED	GENOMIC	WXS	Hybrid Selection	121	38.8322	Solexa-39846	SRX210545	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-08-17	TARGET-30-PALTYB-10A-01W Solexa-39846 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.8.0	broadinstitute.org:Protocol:WXS-ReadAlign:01	61PL4AAXX100817.2.C310.6258_1199-N.7.bam	SRR632817	@dbgap@:reads/SRP012002/SRS083352/SRX210545/SRR632817/SRR632817.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PALTYB.seg.txt	3
TARGET-30-PALTYB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALTYB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALTYB-10A-01W	DNA	EFO	SRS083352	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALTYB-10A-01W Solexa-39846 library	PAIRED	GENOMIC	WXS	Hybrid Selection	121	38.8322	Solexa-39846	SRX210545	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-08-17	TARGET-30-PALTYB-10A-01W Solexa-39846 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.8.0	broadinstitute.org:Protocol:WXS-ReadAlign:01	61PL4AAXX100817.2.C310.6258_1199-N.7.bam	SRR632817	@dbgap@:reads/SRP012002/SRS083352/SRX210545/SRR632817/SRR632817.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PALUDH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALUDH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALUDH-01A-01W	DNA	EFO	SRS083355	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALUDH-01A-01W Solexa-24575 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	39.3043333333333	Solexa-24575	SRX091339	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-12	TARGET-30-PALUDH-01A-01W Solexa-24575 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	615J3AAXX100412.1.C310.6258_1204-T.2.bam	SRR330269	@dbgap@:reads/SRP012002/SRS083355/SRX091339/SRR330269/SRR330269.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PALUDH.seg.txt	3
TARGET-30-PALUDH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALUDH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALUDH-01A-01W	DNA	EFO	SRS083355	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALUDH-01A-01W Solexa-24575 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	39.3043333333333	Solexa-24575	SRX091339	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-12	TARGET-30-PALUDH-01A-01W Solexa-24575 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	615J3AAXX100412.1.C310.6258_1204-T.2.bam	SRR330269	@dbgap@:reads/SRP012002/SRS083355/SRX091339/SRR330269/SRR330269.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PALUDH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALUDH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALUDH-10A-01W	DNA	EFO	SRS083354	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALUDH-10A-01W Solexa-24618 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	40.3156666666667	Solexa-24618	SRX092110	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-12	TARGET-30-PALUDH-10A-01W Solexa-24618 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	615J3AAXX100412.4.C310.6258_1204-N.2.bam	SRR331748	@dbgap@:reads/SRP012002/SRS083354/SRX092110/SRR331748/SRR331748.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PALUDH.seg.txt	3
TARGET-30-PALUDH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALUDH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALUDH-10A-01W	DNA	EFO	SRS083354	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALUDH-10A-01W Solexa-24618 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	40.3156666666667	Solexa-24618	SRX092110	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-12	TARGET-30-PALUDH-10A-01W Solexa-24618 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	615J3AAXX100412.4.C310.6258_1204-N.2.bam	SRR331748	@dbgap@:reads/SRP012002/SRS083354/SRX092110/SRR331748/SRR331748.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PALWIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALWIP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALWIP-01A-01W	DNA	EFO	SRS083261	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALWIP-01A-01W Solexa-21885 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	33.0526666666667	Solexa-21885	SRX091400	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-03-17	TARGET-30-PALWIP-01A-01W Solexa-21885 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.0a16	broadinstitute.org:Protocol:WXS-ReadAlign:01	614HGAAXX100317.1.C310.6258_0974-T.2.bam	SRR330184	@dbgap@:reads/SRP012002/SRS083261/SRX091400/SRR330184/SRR330184.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PALWIP.seg.txt	3
TARGET-30-PALWIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALWIP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALWIP-01A-01W	DNA	EFO	SRS083261	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALWIP-01A-01W Solexa-21885 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	33.0526666666667	Solexa-21885	SRX091400	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-03-17	TARGET-30-PALWIP-01A-01W Solexa-21885 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.0a16	broadinstitute.org:Protocol:WXS-ReadAlign:01	614HGAAXX100317.1.C310.6258_0974-T.2.bam	SRR330184	@dbgap@:reads/SRP012002/SRS083261/SRX091400/SRR330184/SRR330184.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PALWIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALWIP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALWIP-10A-01W	DNA	EFO	SRS083260	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALWIP-10A-01W Solexa-21803 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	39.4435	Solexa-21803	SRX091396	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-03-17	TARGET-30-PALWIP-10A-01W Solexa-21803 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.0a16	broadinstitute.org:Protocol:WXS-ReadAlign:01	614HGAAXX100317.4.C310.6258_0974-N.3.bam	SRR330178	@dbgap@:reads/SRP012002/SRS083260/SRX091396/SRR330178/SRR330178.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PALWIP.seg.txt	3
TARGET-30-PALWIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALWIP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALWIP-10A-01W	DNA	EFO	SRS083260	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALWIP-10A-01W Solexa-21803 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	39.4435	Solexa-21803	SRX091396	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-03-17	TARGET-30-PALWIP-10A-01W Solexa-21803 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.0a16	broadinstitute.org:Protocol:WXS-ReadAlign:01	614HGAAXX100317.4.C310.6258_0974-N.3.bam	SRR330178	@dbgap@:reads/SRP012002/SRS083260/SRX091396/SRR330178/SRR330178.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PALWVJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALWVJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALWVJ-01A-01W	DNA	EFO	SRS083267	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALWVJ-01A-01W Solexa-21815 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	36.1155	Solexa-21815	SRX091394	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-03-17	TARGET-30-PALWVJ-01A-01W Solexa-21815 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.0a16	broadinstitute.org:Protocol:WXS-ReadAlign:01	614HGAAXX100317.6.C310.6258_0982-T.2.bam	SRR330175	@dbgap@:reads/SRP012002/SRS083267/SRX091394/SRR330175/SRR330175.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PALWVJ.seg.txt	3
TARGET-30-PALWVJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALWVJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALWVJ-01A-01W	DNA	EFO	SRS083267	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALWVJ-01A-01W Solexa-21815 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	36.1155	Solexa-21815	SRX091394	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-03-17	TARGET-30-PALWVJ-01A-01W Solexa-21815 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.0a16	broadinstitute.org:Protocol:WXS-ReadAlign:01	614HGAAXX100317.6.C310.6258_0982-T.2.bam	SRR330175	@dbgap@:reads/SRP012002/SRS083267/SRX091394/SRR330175/SRR330175.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PALWVJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALWVJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALWVJ-10A-01W	DNA	EFO	SRS083266	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALWVJ-10A-01W Solexa-21827 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	43.012	Solexa-21827	SRX091398	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-03-17	TARGET-30-PALWVJ-10A-01W Solexa-21827 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.0a16	broadinstitute.org:Protocol:WXS-ReadAlign:01	614HGAAXX100317.8.C310.6258_0982-N.2.bam	SRR330181	@dbgap@:reads/SRP012002/SRS083266/SRX091398/SRR330181/SRR330181.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PALWVJ.seg.txt	3
TARGET-30-PALWVJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALWVJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALWVJ-10A-01W	DNA	EFO	SRS083266	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALWVJ-10A-01W Solexa-21827 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	43.012	Solexa-21827	SRX091398	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-03-17	TARGET-30-PALWVJ-10A-01W Solexa-21827 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.0a16	broadinstitute.org:Protocol:WXS-ReadAlign:01	614HGAAXX100317.8.C310.6258_0982-N.2.bam	SRR330181	@dbgap@:reads/SRP012002/SRS083266/SRX091398/SRR330181/SRR330181.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PALXHW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALXHW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALXHW-01A-01W	DNA	EFO	SRS083272	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALXHW-01A-01W Solexa-24567 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	42.3463333333333	Solexa-24567	SRX091334	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-14	TARGET-30-PALXHW-01A-01W Solexa-24567 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	61E7RAAXX100414.1.C310.6258_0992-T.2.bam	SRR330254	@dbgap@:reads/SRP012002/SRS083272/SRX091334/SRR330254/SRR330254.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PALXHW.seg.txt	3
TARGET-30-PALXHW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALXHW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALXHW-01A-01W	DNA	EFO	SRS083272	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALXHW-01A-01W Solexa-24567 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	42.3463333333333	Solexa-24567	SRX091334	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-14	TARGET-30-PALXHW-01A-01W Solexa-24567 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	61E7RAAXX100414.1.C310.6258_0992-T.2.bam	SRR330254	@dbgap@:reads/SRP012002/SRS083272/SRX091334/SRR330254/SRR330254.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PALXHW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALXHW-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALXHW-10A-01W	DNA	EFO	SRS083271	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALXHW-10A-01W Solexa-24627 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	36.664	Solexa-24627	SRX091393	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-14	TARGET-30-PALXHW-10A-01W Solexa-24627 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	61E7RAAXX100414.4.C310.6258_0992-N.5.bam	SRR330172	@dbgap@:reads/SRP012002/SRS083271/SRX091393/SRR330172/SRR330172.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PALXHW.seg.txt	3
TARGET-30-PALXHW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALXHW-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALXHW-10A-01W	DNA	EFO	SRS083271	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALXHW-10A-01W Solexa-24627 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	36.664	Solexa-24627	SRX091393	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-14	TARGET-30-PALXHW-10A-01W Solexa-24627 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	61E7RAAXX100414.4.C310.6258_0992-N.5.bam	SRR330172	@dbgap@:reads/SRP012002/SRS083271/SRX091393/SRR330172/SRR330172.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PALXMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALXMM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALXMM-01A-01W	DNA	EFO	SRS083274	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALXMM-01A-01W Solexa-24628 library	PAIRED	GENOMIC	WXS	Hybrid Selection	116	34.57485	Solexa-24628	SRX210547	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-08	TARGET-30-PALXMM-01A-01W Solexa-24628 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613V5AAXX100408.8.C310.6258_0997-T.7.bam	SRR632820	@dbgap@:reads/SRP012002/SRS083274/SRX210547/SRR632820/SRR632820.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PALXMM.seg.txt	3
TARGET-30-PALXMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALXMM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALXMM-01A-01W	DNA	EFO	SRS083274	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALXMM-01A-01W Solexa-24628 library	PAIRED	GENOMIC	WXS	Hybrid Selection	116	34.57485	Solexa-24628	SRX210547	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-08	TARGET-30-PALXMM-01A-01W Solexa-24628 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613V5AAXX100408.8.C310.6258_0997-T.7.bam	SRR632820	@dbgap@:reads/SRP012002/SRS083274/SRX210547/SRR632820/SRR632820.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PALXMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALXMM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALXMM-10A-01W	DNA	EFO	SRS083273	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALXMM-10A-01W Solexa-21839 library	PAIRED	GENOMIC	WXS	Hybrid Selection	122	40.0126633333333	Solexa-21839	SRX212205	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-03-17	TARGET-30-PALXMM-10A-01W Solexa-21839 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.0a16	broadinstitute.org:Protocol:WXS-ReadAlign:01	61EMJAAXX100317.6.C310.6258_0997-N.3.bam	SRR639108	@dbgap@:reads/SRP012002/SRS083273/SRX212205/SRR639108/SRR639108.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PALXMM.seg.txt	3
TARGET-30-PALXMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALXMM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALXMM-10A-01W	DNA	EFO	SRS083273	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALXMM-10A-01W Solexa-21839 library	PAIRED	GENOMIC	WXS	Hybrid Selection	122	40.0126633333333	Solexa-21839	SRX212205	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-03-17	TARGET-30-PALXMM-10A-01W Solexa-21839 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.0a16	broadinstitute.org:Protocol:WXS-ReadAlign:01	61EMJAAXX100317.6.C310.6258_0997-N.3.bam	SRR639108	@dbgap@:reads/SRP012002/SRS083273/SRX212205/SRR639108/SRR639108.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PALZRG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALZRG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALZRG-01A-01W	DNA	EFO	SRS083374	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALZRG-01A-01W Solexa-24557 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	41.14	Solexa-24557	SRX091338	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-13	TARGET-30-PALZRG-01A-01W Solexa-24557 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613FJAAXX100413.1.C310.6258_1243-T.3.bam	SRR330266	@dbgap@:reads/SRP012002/SRS083374/SRX091338/SRR330266/SRR330266.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PALZRG.seg.txt	3
TARGET-30-PALZRG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALZRG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALZRG-01A-01W	DNA	EFO	SRS083374	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALZRG-01A-01W Solexa-24557 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	41.14	Solexa-24557	SRX091338	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-13	TARGET-30-PALZRG-01A-01W Solexa-24557 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613FJAAXX100413.1.C310.6258_1243-T.3.bam	SRR330266	@dbgap@:reads/SRP012002/SRS083374/SRX091338/SRR330266/SRR330266.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PALZRG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALZRG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALZRG-10A-01W	DNA	EFO	SRS083373	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALZRG-10A-01W Solexa-24572 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	40.734	Solexa-24572	SRX091340	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-13	TARGET-30-PALZRG-10A-01W Solexa-24572 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613FJAAXX100413.4.C310.6258_1243-N.3.bam	SRR330272	@dbgap@:reads/SRP012002/SRS083373/SRX091340/SRR330272/SRR330272.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PALZRG.seg.txt	3
TARGET-30-PALZRG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALZRG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALZRG-10A-01W	DNA	EFO	SRS083373	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALZRG-10A-01W Solexa-24572 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	40.734	Solexa-24572	SRX091340	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-13	TARGET-30-PALZRG-10A-01W Solexa-24572 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613FJAAXX100413.4.C310.6258_1243-N.3.bam	SRR330272	@dbgap@:reads/SRP012002/SRS083373/SRX091340/SRR330272/SRR330272.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PALZSL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALZSL-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALZSL-01A-01W	DNA	EFO	SRS083378	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALZSL-01A-01W Solexa-21816 library	PAIRED	GENOMIC	WXS	Hybrid Selection	122	38.9341	Solexa-21816	SRX212208	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-03-11	TARGET-30-PALZSL-01A-01W Solexa-21816 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.0a16	broadinstitute.org:Protocol:WXS-ReadAlign:01	61C74AAXX100311.8.C310.6258_1246-T.7.bam	SRR639135	@dbgap@:reads/SRP012002/SRS083378/SRX212208/SRR639135/SRR639135.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PALZSL.seg.txt	3
TARGET-30-PALZSL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALZSL-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALZSL-01A-01W	DNA	EFO	SRS083378	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALZSL-01A-01W Solexa-21816 library	PAIRED	GENOMIC	WXS	Hybrid Selection	122	38.9341	Solexa-21816	SRX212208	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-03-11	TARGET-30-PALZSL-01A-01W Solexa-21816 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.0a16	broadinstitute.org:Protocol:WXS-ReadAlign:01	61C74AAXX100311.8.C310.6258_1246-T.7.bam	SRR639135	@dbgap@:reads/SRP012002/SRS083378/SRX212208/SRR639135/SRR639135.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PALZSL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALZSL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALZSL-10A-01W	DNA	EFO	SRS083377	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALZSL-10A-01W Solexa-39900 library	PAIRED	GENOMIC	WXS	Hybrid Selection	133	47.4167466666667	Solexa-39900	SRX210582	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-08-19	TARGET-30-PALZSL-10A-01W Solexa-39900 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.8.0	broadinstitute.org:Protocol:WXS-ReadAlign:01	618H0AAXX100819.7.C310.6258_1246-N.9.bam	SRR632997	@dbgap@:reads/SRP012002/SRS083377/SRX210582/SRR632997/SRR632997.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PALZSL.seg.txt	3
TARGET-30-PALZSL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALZSL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALZSL-10A-01W	DNA	EFO	SRS083377	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALZSL-10A-01W Solexa-39900 library	PAIRED	GENOMIC	WXS	Hybrid Selection	133	47.4167466666667	Solexa-39900	SRX210582	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-08-19	TARGET-30-PALZSL-10A-01W Solexa-39900 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.8.0	broadinstitute.org:Protocol:WXS-ReadAlign:01	618H0AAXX100819.7.C310.6258_1246-N.9.bam	SRR632997	@dbgap@:reads/SRP012002/SRS083377/SRX210582/SRR632997/SRR632997.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PALZZV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALZZV-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALZZV-01A-01W	DNA	EFO	SRS083389	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALZZV-01A-01W Solexa-39880 library	PAIRED	GENOMIC	WXS	Hybrid Selection	230	39.0865	Solexa-39880	SRX091403	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-08-23	TARGET-30-PALZZV-01A-01W Solexa-39880 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.8.0	broadinstitute.org:Protocol:WXS-ReadAlign:01	61RTHAAXX100823.5.C310.6258_1266-T.1.bam	SRR330192	@dbgap@:reads/SRP012002/SRS083389/SRX091403/SRR330192/SRR330192.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PALZZV.seg.txt	3
TARGET-30-PALZZV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALZZV-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALZZV-01A-01W	DNA	EFO	SRS083389	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALZZV-01A-01W Solexa-39880 library	PAIRED	GENOMIC	WXS	Hybrid Selection	230	39.0865	Solexa-39880	SRX091403	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-08-23	TARGET-30-PALZZV-01A-01W Solexa-39880 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.8.0	broadinstitute.org:Protocol:WXS-ReadAlign:01	61RTHAAXX100823.5.C310.6258_1266-T.1.bam	SRR330192	@dbgap@:reads/SRP012002/SRS083389/SRX091403/SRR330192/SRR330192.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PALZZV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALZZV-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALZZV-10A-01W	DNA	EFO	SRS083388	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALZZV-10A-01W Solexa-39878 library	PAIRED	GENOMIC	WXS	Hybrid Selection	230	40.545	Solexa-39878	SRX091404	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-08-18	TARGET-30-PALZZV-10A-01W Solexa-39878 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.8.0	broadinstitute.org:Protocol:WXS-ReadAlign:01	62578AAXX100818.5.C310.6258_1266-N.2.bam	SRR330194	@dbgap@:reads/SRP012002/SRS083388/SRX091404/SRR330194/SRR330194.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PALZZV.seg.txt	3
TARGET-30-PALZZV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PALZZV-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PALZZV-10A-01W	DNA	EFO	SRS083388	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PALZZV-10A-01W Solexa-39878 library	PAIRED	GENOMIC	WXS	Hybrid Selection	230	40.545	Solexa-39878	SRX091404	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-08-18	TARGET-30-PALZZV-10A-01W Solexa-39878 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.8.0	broadinstitute.org:Protocol:WXS-ReadAlign:01	62578AAXX100818.5.C310.6258_1266-N.2.bam	SRR330194	@dbgap@:reads/SRP012002/SRS083388/SRX091404/SRR330194/SRR330194.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAMBAC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMBAC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMBAC-01A-01W	DNA	EFO	SRS083393	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAMBAC-01A-01W Solexa-39866 library	PAIRED	GENOMIC	WXS	Hybrid Selection	230	41.4285	Solexa-39866	SRX092082	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-08-17	TARGET-30-PAMBAC-01A-01W Solexa-39866 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.8.0	broadinstitute.org:Protocol:WXS-ReadAlign:01	62569AAXX100817.3.C310.6258_1273-T.2.bam	SRR331727	@dbgap@:reads/SRP012002/SRS083393/SRX092082/SRR331727/SRR331727.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAMBAC.seg.txt	3
TARGET-30-PAMBAC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMBAC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMBAC-01A-01W	DNA	EFO	SRS083393	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAMBAC-01A-01W Solexa-39866 library	PAIRED	GENOMIC	WXS	Hybrid Selection	230	41.4285	Solexa-39866	SRX092082	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-08-17	TARGET-30-PAMBAC-01A-01W Solexa-39866 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.8.0	broadinstitute.org:Protocol:WXS-ReadAlign:01	62569AAXX100817.3.C310.6258_1273-T.2.bam	SRR331727	@dbgap@:reads/SRP012002/SRS083393/SRX092082/SRR331727/SRR331727.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAMBAC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMBAC-14A	organism part	EFO	Bone Marrow	NCIt	"Bone Marrow Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMBAC-14A-01W	DNA	EFO	SRS083392	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAMBAC-14A-01W Solexa-39856 library	PAIRED	GENOMIC	WXS	Hybrid Selection	230	39.812	Solexa-39856	SRX091405	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-08-19	TARGET-30-PAMBAC-14A-01W Solexa-39856 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.8.0	broadinstitute.org:Protocol:WXS-ReadAlign:01	61PLMAAXX100819.5.C310.6258_1273-N.2.bam	SRR330195	@dbgap@:reads/SRP012002/SRS083392/SRX091405/SRR330195/SRR330195.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAMBAC.seg.txt	3
TARGET-30-PAMBAC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMBAC-14A	organism part	EFO	Bone Marrow	NCIt	"Bone Marrow Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMBAC-14A-01W	DNA	EFO	SRS083392	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAMBAC-14A-01W Solexa-39856 library	PAIRED	GENOMIC	WXS	Hybrid Selection	230	39.812	Solexa-39856	SRX091405	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-08-19	TARGET-30-PAMBAC-14A-01W Solexa-39856 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.8.0	broadinstitute.org:Protocol:WXS-ReadAlign:01	61PLMAAXX100819.5.C310.6258_1273-N.2.bam	SRR330195	@dbgap@:reads/SRP012002/SRS083392/SRX091405/SRR330195/SRR330195.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAMCXF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMCXF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMCXF-01A-01W	DNA	EFO	SRS083625	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAMCXF-01A-01W Solexa-24423 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	45.698	Solexa-24423	SRX092094	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-20	TARGET-30-PAMCXF-01A-01W Solexa-24423 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613HAAAXX100420.7.C310.6258_3382-T.3.bam	SRR331794	@dbgap@:reads/SRP012002/SRS083625/SRX092094/SRR331794/SRR331794.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAMCXF.seg.txt	3
TARGET-30-PAMCXF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMCXF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMCXF-01A-01W	DNA	EFO	SRS083625	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAMCXF-01A-01W Solexa-24423 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	45.698	Solexa-24423	SRX092094	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-20	TARGET-30-PAMCXF-01A-01W Solexa-24423 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613HAAAXX100420.7.C310.6258_3382-T.3.bam	SRR331794	@dbgap@:reads/SRP012002/SRS083625/SRX092094/SRR331794/SRR331794.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAMCXF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMCXF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMCXF-10A-01W	DNA	EFO	SRS083624	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAMCXF-10A-01W Solexa-24435 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	38.521	Solexa-24435	SRX091455	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-20	TARGET-30-PAMCXF-10A-01W Solexa-24435 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613HAAAXX100420.8.C310.6258_3382-N.3.bam	SRR330385	@dbgap@:reads/SRP012002/SRS083624/SRX091455/SRR330385/SRR330385.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAMCXF.seg.txt	3
TARGET-30-PAMCXF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMCXF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMCXF-10A-01W	DNA	EFO	SRS083624	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAMCXF-10A-01W Solexa-24435 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	38.521	Solexa-24435	SRX091455	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-20	TARGET-30-PAMCXF-10A-01W Solexa-24435 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613HAAAXX100420.8.C310.6258_3382-N.3.bam	SRR330385	@dbgap@:reads/SRP012002/SRS083624/SRX091455/SRR330385/SRR330385.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAMDAL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMDAL-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMDAL-01A-01W	DNA	EFO	SRS083385	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAMDAL-01A-01W Solexa-24609 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	36.5253333333333	Solexa-24609	SRX091342	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-14	TARGET-30-PAMDAL-01A-01W Solexa-24609 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613V0AAXX100414.1.C310.6258_1263-T.3.bam	SRR330277	@dbgap@:reads/SRP012002/SRS083385/SRX091342/SRR330277/SRR330277.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAMDAL.seg.txt	3
TARGET-30-PAMDAL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMDAL-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMDAL-01A-01W	DNA	EFO	SRS083385	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAMDAL-01A-01W Solexa-24609 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	36.5253333333333	Solexa-24609	SRX091342	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-14	TARGET-30-PAMDAL-01A-01W Solexa-24609 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613V0AAXX100414.1.C310.6258_1263-T.3.bam	SRR330277	@dbgap@:reads/SRP012002/SRS083385/SRX091342/SRR330277/SRR330277.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAMDAL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMDAL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMDAL-10A-01W	DNA	EFO	SRS083384	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAMDAL-10A-01W Solexa-24610 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	37.828	Solexa-24610	SRX092078	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-14	TARGET-30-PAMDAL-10A-01W Solexa-24610 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613V0AAXX100414.4.C310.6258_1263-N.4.bam	SRR331718	@dbgap@:reads/SRP012002/SRS083384/SRX092078/SRR331718/SRR331718.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAMDAL.seg.txt	3
TARGET-30-PAMDAL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMDAL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMDAL-10A-01W	DNA	EFO	SRS083384	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAMDAL-10A-01W Solexa-24610 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	37.828	Solexa-24610	SRX092078	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-14	TARGET-30-PAMDAL-10A-01W Solexa-24610 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613V0AAXX100414.4.C310.6258_1263-N.4.bam	SRR331718	@dbgap@:reads/SRP012002/SRS083384/SRX092078/SRR331718/SRR331718.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAMMWD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMMWD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMMWD-01A-01W	DNA	EFO	SRS083415	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAMMWD-01A-01W Solexa-24573 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	38.178	Solexa-24573	SRX091402	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-07	TARGET-30-PAMMWD-01A-01W Solexa-24573 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613UWAAXX100407.1.C310.6258_1369-T.3.bam	SRR330189	@dbgap@:reads/SRP012002/SRS083415/SRX091402/SRR330189/SRR330189.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAMMWD.seg.txt	3
TARGET-30-PAMMWD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMMWD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMMWD-01A-01W	DNA	EFO	SRS083415	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAMMWD-01A-01W Solexa-24573 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	38.178	Solexa-24573	SRX091402	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-07	TARGET-30-PAMMWD-01A-01W Solexa-24573 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613UWAAXX100407.1.C310.6258_1369-T.3.bam	SRR330189	@dbgap@:reads/SRP012002/SRS083415/SRX091402/SRR330189/SRR330189.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAMMWD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMMWD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMMWD-10A-01W	DNA	EFO	SRS083414	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAMMWD-10A-01W Solexa-24577 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	41.3733333333333	Solexa-24577	SRX092077	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-07	TARGET-30-PAMMWD-10A-01W Solexa-24577 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613UWAAXX100407.4.C310.6258_1369-N.2.bam	SRR331715	@dbgap@:reads/SRP012002/SRS083414/SRX092077/SRR331715/SRR331715.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAMMWD.seg.txt	3
TARGET-30-PAMMWD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMMWD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMMWD-10A-01W	DNA	EFO	SRS083414	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAMMWD-10A-01W Solexa-24577 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	41.3733333333333	Solexa-24577	SRX092077	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-07	TARGET-30-PAMMWD-10A-01W Solexa-24577 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613UWAAXX100407.4.C310.6258_1369-N.2.bam	SRR331715	@dbgap@:reads/SRP012002/SRS083414/SRX092077/SRR331715/SRR331715.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAMMXF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMMXF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMMXF-01A-01W	DNA	EFO	SRS083417	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAMMXF-01A-01W Solexa-24578 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	41.038	Solexa-24578	SRX091429	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-08	TARGET-30-PAMMXF-01A-01W Solexa-24578 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	61E34AAXX100408.1.C310.6258_1375-T.3.bam	SRR330334	@dbgap@:reads/SRP012002/SRS083417/SRX091429/SRR330334/SRR330334.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAMMXF.seg.txt	3
TARGET-30-PAMMXF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMMXF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMMXF-01A-01W	DNA	EFO	SRS083417	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAMMXF-01A-01W Solexa-24578 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	41.038	Solexa-24578	SRX091429	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-08	TARGET-30-PAMMXF-01A-01W Solexa-24578 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	61E34AAXX100408.1.C310.6258_1375-T.3.bam	SRR330334	@dbgap@:reads/SRP012002/SRS083417/SRX091429/SRR330334/SRR330334.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAMMXF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMMXF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMMXF-10A-01W	DNA	EFO	SRS083416	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAMMXF-10A-01W Solexa-24574 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	40.5916666666667	Solexa-24574	SRX091430	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-08	TARGET-30-PAMMXF-10A-01W Solexa-24574 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	61E34AAXX100408.4.C310.6258_1375-N.3.bam	SRR330337	@dbgap@:reads/SRP012002/SRS083416/SRX091430/SRR330337/SRR330337.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAMMXF.seg.txt	3
TARGET-30-PAMMXF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMMXF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMMXF-10A-01W	DNA	EFO	SRS083416	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAMMXF-10A-01W Solexa-24574 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	40.5916666666667	Solexa-24574	SRX091430	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-08	TARGET-30-PAMMXF-10A-01W Solexa-24574 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	61E34AAXX100408.4.C310.6258_1375-N.3.bam	SRR330337	@dbgap@:reads/SRP012002/SRS083416/SRX091430/SRR330337/SRR330337.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAMNYX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMNYX-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMNYX-01A-01D	DNA	EFO	SRS379867		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAMNYX-01A-01D Catch-131145 library	PAIRED	GENOMIC	WXS	Hybrid Selection	134	54.1755009090909	Catch-131145	SRX210519	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-02	TARGET-30-PAMNYX-01A-01D Catch-131145 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0KW1ACXX120202.6.CCTATGCC.C829.TARGET-30-PAMNYX-01A-01D.1.bam	SRR632741	@dbgap@:reads/SRP012002/SRS379867/SRX210519/SRR632741/SRR632741.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAMNYX.seg.txt	3
TARGET-30-PAMNYX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMNYX-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMNYX-01A-01D	DNA	EFO	SRS379867		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAMNYX-01A-01D Catch-131145 library	PAIRED	GENOMIC	WXS	Hybrid Selection	134	54.1755009090909	Catch-131145	SRX210519	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-02	TARGET-30-PAMNYX-01A-01D Catch-131145 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0KW1ACXX120202.6.CCTATGCC.C829.TARGET-30-PAMNYX-01A-01D.1.bam	SRR632741	@dbgap@:reads/SRP012002/SRS379867/SRX210519/SRR632741/SRR632741.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAMNYX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMNYX-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMNYX-10A-01D	DNA	EFO	SRS380221		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAMNYX-10A-01D Catch-131153 library	PAIRED	GENOMIC	WXS	Hybrid Selection	164	70.0328368181818	Catch-131153	SRX211252	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PAMNYX-10A-01D Catch-131153 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DBMACXX120206.2.TTAATCAG.C829.TARGET-30-PAMNYX-10A-01D.1.bam	SRR636127	@dbgap@:reads/SRP012002/SRS380221/SRX211252/SRR636127/SRR636127.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAMNYX.seg.txt	3
TARGET-30-PAMNYX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMNYX-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMNYX-10A-01D	DNA	EFO	SRS380221		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAMNYX-10A-01D Catch-131153 library	PAIRED	GENOMIC	WXS	Hybrid Selection	164	70.0328368181818	Catch-131153	SRX211252	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PAMNYX-10A-01D Catch-131153 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DBMACXX120206.2.TTAATCAG.C829.TARGET-30-PAMNYX-10A-01D.1.bam	SRR636127	@dbgap@:reads/SRP012002/SRS380221/SRX211252/SRR636127/SRR636127.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAMUTD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMUTD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMUTD-01A-01W	DNA	EFO	SRS083432	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAMUTD-01A-01W Solexa-24580 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	40.2966666666667	Solexa-24580	SRX092058	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-09	TARGET-30-PAMUTD-01A-01W Solexa-24580 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	6140JAAXX100409.1.C310.6258_1480-T.2.bam	SRR331484	@dbgap@:reads/SRP012002/SRS083432/SRX092058/SRR331484/SRR331484.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAMUTD.seg.txt	3
TARGET-30-PAMUTD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMUTD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMUTD-01A-01W	DNA	EFO	SRS083432	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAMUTD-01A-01W Solexa-24580 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	40.2966666666667	Solexa-24580	SRX092058	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-09	TARGET-30-PAMUTD-01A-01W Solexa-24580 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	6140JAAXX100409.1.C310.6258_1480-T.2.bam	SRR331484	@dbgap@:reads/SRP012002/SRS083432/SRX092058/SRR331484/SRR331484.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAMUTD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMUTD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMUTD-10A-01W	DNA	EFO	SRS083431	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAMUTD-10A-01W Solexa-24600 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	41.0776666666667	Solexa-24600	SRX092062	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-09	TARGET-30-PAMUTD-10A-01W Solexa-24600 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	6140JAAXX100409.4.C310.6258_1480-N.2.bam	SRR331495	@dbgap@:reads/SRP012002/SRS083431/SRX092062/SRR331495/SRR331495.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAMUTD.seg.txt	3
TARGET-30-PAMUTD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMUTD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMUTD-10A-01W	DNA	EFO	SRS083431	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAMUTD-10A-01W Solexa-24600 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	41.0776666666667	Solexa-24600	SRX092062	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-09	TARGET-30-PAMUTD-10A-01W Solexa-24600 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	6140JAAXX100409.4.C310.6258_1480-N.2.bam	SRR331495	@dbgap@:reads/SRP012002/SRS083431/SRX092062/SRR331495/SRR331495.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAMVLG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMVLG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMVLG-01A-01D	DNA	EFO	SRS380051		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAMVLG-01A-01D Catch-131122 library	PAIRED	GENOMIC	WXS	Hybrid Selection	161	63.5428913636364	Catch-131122	SRX210841	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-02	TARGET-30-PAMVLG-01A-01D Catch-131122 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0KW1ACXX120202.4.GTCTGATG.C829.TARGET-30-PAMVLG-01A-01D.1.bam	SRR634561	@dbgap@:reads/SRP012002/SRS380051/SRX210841/SRR634561/SRR634561.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAMVLG.seg.txt	3
TARGET-30-PAMVLG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMVLG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMVLG-01A-01D	DNA	EFO	SRS380051		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAMVLG-01A-01D Catch-131122 library	PAIRED	GENOMIC	WXS	Hybrid Selection	161	63.5428913636364	Catch-131122	SRX210841	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-02	TARGET-30-PAMVLG-01A-01D Catch-131122 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0KW1ACXX120202.4.GTCTGATG.C829.TARGET-30-PAMVLG-01A-01D.1.bam	SRR634561	@dbgap@:reads/SRP012002/SRS380051/SRX210841/SRR634561/SRR634561.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAMVLG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMVLG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMVLG-10A-01D	DNA	EFO	SRS379873		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAMVLG-10A-01D Catch-131187 library	PAIRED	GENOMIC	WXS	Hybrid Selection	164	67.4904872727273	Catch-131187	SRX210548	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PAMVLG-10A-01D Catch-131187 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DBMACXX120206.2.GACCGTTG.C829.TARGET-30-PAMVLG-10A-01D.1.bam	SRR633349	@dbgap@:reads/SRP012002/SRS379873/SRX210548/SRR633349/SRR633349.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAMVLG.seg.txt	3
TARGET-30-PAMVLG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMVLG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMVLG-10A-01D	DNA	EFO	SRS379873		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAMVLG-10A-01D Catch-131187 library	PAIRED	GENOMIC	WXS	Hybrid Selection	164	67.4904872727273	Catch-131187	SRX210548	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PAMVLG-10A-01D Catch-131187 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DBMACXX120206.2.GACCGTTG.C829.TARGET-30-PAMVLG-10A-01D.1.bam	SRR633349	@dbgap@:reads/SRP012002/SRS379873/SRX210548/SRR633349/SRR633349.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAMVRA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMVRA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMVRA-01A-01W	DNA	EFO	SRS083438	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAMVRA-01A-01W Solexa-24582 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	40.1693333333333	Solexa-24582	SRX091347	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-12	TARGET-30-PAMVRA-01A-01W Solexa-24582 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613VRAAXX100412.1.C310.6258_1501-T.2.bam	SRR330292	@dbgap@:reads/SRP012002/SRS083438/SRX091347/SRR330292/SRR330292.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAMVRA.seg.txt	3
TARGET-30-PAMVRA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMVRA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMVRA-10A-01W	DNA	EFO	SRS083437	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAMVRA-10A-01W Solexa-24583 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	35.887	Solexa-24583	SRX091346	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-12	TARGET-30-PAMVRA-10A-01W Solexa-24583 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613VRAAXX100412.4.C310.6258_1501-N.3.bam	SRR330289	@dbgap@:reads/SRP012002/SRS083437/SRX091346/SRR330289/SRR330289.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAMVRA.seg.txt	3
TARGET-30-PAMYCE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMYCE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMYCE-01A-01W	DNA	EFO	SRS083451	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAMYCE-01A-01W Solexa-24547 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	40.01	Solexa-24547	SRX092057	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-14	TARGET-30-PAMYCE-01A-01W Solexa-24547 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613TVAAXX100414.1.C310.6258_1587-T.2.bam	SRR331481	@dbgap@:reads/SRP012002/SRS083451/SRX092057/SRR331481/SRR331481.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAMYCE.seg.txt	3
TARGET-30-PAMYCE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMYCE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMYCE-01A-01W	DNA	EFO	SRS083451	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAMYCE-01A-01W Solexa-24547 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	40.01	Solexa-24547	SRX092057	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-14	TARGET-30-PAMYCE-01A-01W Solexa-24547 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613TVAAXX100414.1.C310.6258_1587-T.2.bam	SRR331481	@dbgap@:reads/SRP012002/SRS083451/SRX092057/SRR331481/SRR331481.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAMYCE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMYCE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMYCE-10A-01W	DNA	EFO	SRS083450	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAMYCE-10A-01W Solexa-24584 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	40.922	Solexa-24584	SRX092059	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-14	TARGET-30-PAMYCE-10A-01W Solexa-24584 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613TVAAXX100414.4.C310.6258_1587-N.2.bam	SRR331487	@dbgap@:reads/SRP012002/SRS083450/SRX092059/SRR331487/SRR331487.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAMYCE.seg.txt	3
TARGET-30-PAMYCE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMYCE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMYCE-10A-01W	DNA	EFO	SRS083450	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAMYCE-10A-01W Solexa-24584 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	40.922	Solexa-24584	SRX092059	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-14	TARGET-30-PAMYCE-10A-01W Solexa-24584 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613TVAAXX100414.4.C310.6258_1587-N.2.bam	SRR331487	@dbgap@:reads/SRP012002/SRS083450/SRX092059/SRR331487/SRR331487.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAMZGT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMZGT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMZGT-01A-01W	DNA	EFO	SRS083459	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAMZGT-01A-01W Solexa-24548 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	40.6766666666667	Solexa-24548	SRX092130	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-07	TARGET-30-PAMZGT-01A-01W Solexa-24548 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613W6AAXX100407.1.C310.6258_1599-T.2.bam	SRR331771	@dbgap@:reads/SRP012002/SRS083459/SRX092130/SRR331771/SRR331771.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAMZGT.seg.txt	3
TARGET-30-PAMZGT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMZGT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMZGT-01A-01W	DNA	EFO	SRS083459	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAMZGT-01A-01W Solexa-24548 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	40.6766666666667	Solexa-24548	SRX092130	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-07	TARGET-30-PAMZGT-01A-01W Solexa-24548 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613W6AAXX100407.1.C310.6258_1599-T.2.bam	SRR331771	@dbgap@:reads/SRP012002/SRS083459/SRX092130/SRR331771/SRR331771.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAMZGT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMZGT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMZGT-10A-01W	DNA	EFO	SRS083458	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAMZGT-10A-01W Solexa-24585 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	37.3653333333333	Solexa-24585	SRX091345	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-07	TARGET-30-PAMZGT-10A-01W Solexa-24585 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613W6AAXX100407.4.C310.6258_1599-N.3.bam	SRR330286	@dbgap@:reads/SRP012002/SRS083458/SRX091345/SRR330286/SRR330286.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAMZGT.seg.txt	3
TARGET-30-PAMZGT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMZGT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMZGT-10A-01W	DNA	EFO	SRS083458	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAMZGT-10A-01W Solexa-24585 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	37.3653333333333	Solexa-24585	SRX091345	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-07	TARGET-30-PAMZGT-10A-01W Solexa-24585 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613W6AAXX100407.4.C310.6258_1599-N.3.bam	SRR330286	@dbgap@:reads/SRP012002/SRS083458/SRX091345/SRR330286/SRR330286.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAMZMG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMZMG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMZMG-01A-01W	DNA	EFO	SRS083462	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAMZMG-01A-01W Solexa-24612 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	41.885	Solexa-24612	SRX092127	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-08	TARGET-30-PAMZMG-01A-01W Solexa-24612 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	61DPFAAXX100408.1.C310.6258_1613-T.2.bam	SRR331762	@dbgap@:reads/SRP012002/SRS083462/SRX092127/SRR331762/SRR331762.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAMZMG.seg.txt	3
TARGET-30-PAMZMG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMZMG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMZMG-01A-01W	DNA	EFO	SRS083462	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAMZMG-01A-01W Solexa-24612 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	41.885	Solexa-24612	SRX092127	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-08	TARGET-30-PAMZMG-01A-01W Solexa-24612 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	61DPFAAXX100408.1.C310.6258_1613-T.2.bam	SRR331762	@dbgap@:reads/SRP012002/SRS083462/SRX092127/SRR331762/SRR331762.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAMZMG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMZMG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMZMG-10A-01W	DNA	EFO	SRS083461	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAMZMG-10A-01W Solexa-24611 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	39.6726666666667	Solexa-24611	SRX092126	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-08	TARGET-30-PAMZMG-10A-01W Solexa-24611 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	61DPFAAXX100408.4.C310.6258_1613-N.2.bam	SRR331759	@dbgap@:reads/SRP012002/SRS083461/SRX092126/SRR331759/SRR331759.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAMZMG.seg.txt	3
TARGET-30-PAMZMG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAMZMG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAMZMG-10A-01W	DNA	EFO	SRS083461	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAMZMG-10A-01W Solexa-24611 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	39.6726666666667	Solexa-24611	SRX092126	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-08	TARGET-30-PAMZMG-10A-01W Solexa-24611 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	61DPFAAXX100408.4.C310.6258_1613-N.2.bam	SRR331759	@dbgap@:reads/SRP012002/SRS083461/SRX092126/SRR331759/SRR331759.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PANBCI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANBCI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANBCI-01A-01W	DNA	EFO	SRS083469	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PANBCI-01A-01W Solexa-24556 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	38.489	Solexa-24556	SRX091364	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-09	TARGET-30-PANBCI-01A-01W Solexa-24556 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613TEAAXX100409.1.C310.6258_1659-T.4.bam	SRR330144	@dbgap@:reads/SRP012002/SRS083469/SRX091364/SRR330144/SRR330144.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PANBCI.seg.txt	3
TARGET-30-PANBCI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANBCI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANBCI-01A-01W	DNA	EFO	SRS083469	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PANBCI-01A-01W Solexa-24556 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	38.489	Solexa-24556	SRX091364	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-09	TARGET-30-PANBCI-01A-01W Solexa-24556 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613TEAAXX100409.1.C310.6258_1659-T.4.bam	SRR330144	@dbgap@:reads/SRP012002/SRS083469/SRX091364/SRR330144/SRR330144.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PANBCI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANBCI-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANBCI-10A-01W	DNA	EFO	SRS083468	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PANBCI-10A-01W Solexa-24614 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	38.441	Solexa-24614	SRX091367	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-09	TARGET-30-PANBCI-10A-01W Solexa-24614 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613TEAAXX100409.4.C310.6258_1659-N.2.bam	SRR330152	@dbgap@:reads/SRP012002/SRS083468/SRX091367/SRR330152/SRR330152.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PANBCI.seg.txt	3
TARGET-30-PANBCI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANBCI-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANBCI-10A-01W	DNA	EFO	SRS083468	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PANBCI-10A-01W Solexa-24614 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	38.441	Solexa-24614	SRX091367	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-09	TARGET-30-PANBCI-10A-01W Solexa-24614 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613TEAAXX100409.4.C310.6258_1659-N.2.bam	SRR330152	@dbgap@:reads/SRP012002/SRS083468/SRX091367/SRR330152/SRR330152.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PANBMJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANBMJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANBMJ-01A-01W	DNA	EFO	SRS083528	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PANBMJ-01A-01W Solexa-24552 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	39.445	Solexa-24552	SRX091444	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-06-20	TARGET-30-PANBMJ-01A-01W Solexa-24552 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	61KRWAAXX100620.8.C310.6258_2003-T.5.bam	SRR330373	@dbgap@:reads/SRP012002/SRS083528/SRX091444/SRR330373/SRR330373.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PANBMJ.seg.txt	3
TARGET-30-PANBMJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANBMJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANBMJ-10A-01W	DNA	EFO	SRS083527	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PANBMJ-10A-01W Solexa-24592 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	43.509	Solexa-24592	SRX092121	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-06-20	TARGET-30-PANBMJ-10A-01W Solexa-24592 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	61KRWAAXX100620.5.C310.6258_2003-N.2.bam	SRR331569	@dbgap@:reads/SRP012002/SRS083527/SRX092121/SRR331569/SRR331569.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PANBMJ.seg.txt	3
TARGET-30-PANBSP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANBSP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANBSP-01A-01W	DNA	EFO	SRS083471	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PANBSP-01A-01W Solexa-24613 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	38.9203333333333	Solexa-24613	SRX092129	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-12	TARGET-30-PANBSP-01A-01W Solexa-24613 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	61JKLAAXX100412.1.C310.6258_1669-T.2.bam	SRR331768	@dbgap@:reads/SRP012002/SRS083471/SRX092129/SRR331768/SRR331768.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PANBSP.seg.txt	3
TARGET-30-PANBSP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANBSP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANBSP-01A-01W	DNA	EFO	SRS083471	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PANBSP-01A-01W Solexa-24613 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	38.9203333333333	Solexa-24613	SRX092129	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-12	TARGET-30-PANBSP-01A-01W Solexa-24613 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	61JKLAAXX100412.1.C310.6258_1669-T.2.bam	SRR331768	@dbgap@:reads/SRP012002/SRS083471/SRX092129/SRR331768/SRR331768.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PANBSP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANBSP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANBSP-10A-01W	DNA	EFO	SRS083470	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PANBSP-10A-01W Solexa-24586 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	40.64	Solexa-24586	SRX091368	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-12	TARGET-30-PANBSP-10A-01W Solexa-24586 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	61JKLAAXX100412.4.C310.6258_1669-N.3.bam	SRR330155	@dbgap@:reads/SRP012002/SRS083470/SRX091368/SRR330155/SRR330155.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PANBSP.seg.txt	3
TARGET-30-PANBSP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANBSP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANBSP-10A-01W	DNA	EFO	SRS083470	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PANBSP-10A-01W Solexa-24586 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	40.64	Solexa-24586	SRX091368	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-12	TARGET-30-PANBSP-10A-01W Solexa-24586 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	61JKLAAXX100412.4.C310.6258_1669-N.3.bam	SRR330155	@dbgap@:reads/SRP012002/SRS083470/SRX091368/SRR330155/SRR330155.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PANIPC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Metastatic Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANIPC-06A	organism part	EFO	Metastatic Tumor	NCIt	"Metastatic"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANIPC-06A-01W	DNA	EFO	SRS083484	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PANIPC-06A-01W Solexa-24847 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	41.56	Solexa-24847	SRX091437	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-20	TARGET-30-PANIPC-06A-01W Solexa-24847 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613HAAAXX100420.1.C310.6258_1744-T.3.bam	SRR330354	@dbgap@:reads/SRP012002/SRS083484/SRX091437/SRR330354/SRR330354.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PANIPC.seg.txt	3
TARGET-30-PANIPC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Metastatic Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANIPC-06A	organism part	EFO	Metastatic Tumor	NCIt	"Metastatic"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANIPC-06A-01W	DNA	EFO	SRS083484	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PANIPC-06A-01W Solexa-24847 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	41.56	Solexa-24847	SRX091437	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-20	TARGET-30-PANIPC-06A-01W Solexa-24847 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613HAAAXX100420.1.C310.6258_1744-T.3.bam	SRR330354	@dbgap@:reads/SRP012002/SRS083484/SRX091437/SRR330354/SRR330354.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PANIPC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANIPC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANIPC-10A-01W	DNA	EFO	SRS083483	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PANIPC-10A-01W Solexa-24536 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	39.2533333333333	Solexa-24536	SRX091366	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-20	TARGET-30-PANIPC-10A-01W Solexa-24536 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613HAAAXX100420.4.C310.6258_1744-N.6.bam	SRR330149	@dbgap@:reads/SRP012002/SRS083483/SRX091366/SRR330149/SRR330149.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PANIPC.seg.txt	3
TARGET-30-PANIPC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANIPC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANIPC-10A-01W	DNA	EFO	SRS083483	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PANIPC-10A-01W Solexa-24536 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	39.2533333333333	Solexa-24536	SRX091366	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-20	TARGET-30-PANIPC-10A-01W Solexa-24536 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613HAAAXX100420.4.C310.6258_1744-N.6.bam	SRR330149	@dbgap@:reads/SRP012002/SRS083483/SRX091366/SRR330149/SRR330149.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PANKFE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANKFE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANKFE-01A-01W	DNA	EFO	SRS083486	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PANKFE-01A-01W Solexa-24538 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	39.5583333333333	Solexa-24538	SRX091439	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-13	TARGET-30-PANKFE-01A-01W Solexa-24538 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	61418AAXX100413.1.C310.6258_1749-T.2.bam	SRR330360	@dbgap@:reads/SRP012002/SRS083486/SRX091439/SRR330360/SRR330360.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PANKFE.seg.txt	3
TARGET-30-PANKFE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANKFE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANKFE-01A-01W	DNA	EFO	SRS083486	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PANKFE-01A-01W Solexa-24538 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	39.5583333333333	Solexa-24538	SRX091439	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-13	TARGET-30-PANKFE-01A-01W Solexa-24538 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	61418AAXX100413.1.C310.6258_1749-T.2.bam	SRR330360	@dbgap@:reads/SRP012002/SRS083486/SRX091439/SRR330360/SRR330360.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PANKFE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANKFE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANKFE-10A-01W	DNA	EFO	SRS083485	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PANKFE-10A-01W Solexa-24539 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	41.7266666666667	Solexa-24539	SRX091435	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-13	TARGET-30-PANKFE-10A-01W Solexa-24539 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	61418AAXX100413.4.C310.6258_1749-N.2.bam	SRR330348	@dbgap@:reads/SRP012002/SRS083485/SRX091435/SRR330348/SRR330348.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PANKFE.seg.txt	3
TARGET-30-PANKFE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANKFE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANKFE-10A-01W	DNA	EFO	SRS083485	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PANKFE-10A-01W Solexa-24539 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	41.7266666666667	Solexa-24539	SRX091435	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-13	TARGET-30-PANKFE-10A-01W Solexa-24539 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	61418AAXX100413.4.C310.6258_1749-N.2.bam	SRR330348	@dbgap@:reads/SRP012002/SRS083485/SRX091435/SRR330348/SRR330348.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PANLET	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANLET-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANLET-01A-01D	DNA	EFO	SRS375959		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PANLET-01A-01D Catch-131158 library	PAIRED	GENOMIC	WXS	Hybrid Selection	171	75.4232618181818	Catch-131158	SRX210807	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PANLET-01A-01D Catch-131158 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DBMACXX120206.7.AAGACACT.C829.TARGET-30-PANLET-01A-01D.1.bam	SRR634402	@dbgap@:reads/SRP012002/SRS375959/SRX210807/SRR634402/SRR634402.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PANLET.seg.txt	3
TARGET-30-PANLET	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANLET-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANLET-01A-01D	DNA	EFO	SRS375959		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PANLET-01A-01D Catch-131158 library	PAIRED	GENOMIC	WXS	Hybrid Selection	171	75.4232618181818	Catch-131158	SRX210807	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PANLET-01A-01D Catch-131158 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DBMACXX120206.7.AAGACACT.C829.TARGET-30-PANLET-01A-01D.1.bam	SRR634402	@dbgap@:reads/SRP012002/SRS375959/SRX210807/SRR634402/SRR634402.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PANLET	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANLET-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANLET-10A-01D	DNA	EFO	SRS375958		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PANLET-10A-01D Catch-131114 library	PAIRED	GENOMIC	WXS	Hybrid Selection	169	68.8983863636364	Catch-131114	SRX209994	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-02	TARGET-30-PANLET-10A-01D Catch-131114 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0KW1ACXX120202.3.AGGTAAGG.C829.TARGET-30-PANLET-10A-01D.1.bam	SRR632085	@dbgap@:reads/SRP012002/SRS375958/SRX209994/SRR632085/SRR632085.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PANLET.seg.txt	3
TARGET-30-PANLET	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANLET-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANLET-10A-01D	DNA	EFO	SRS375958		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PANLET-10A-01D Catch-131114 library	PAIRED	GENOMIC	WXS	Hybrid Selection	169	68.8983863636364	Catch-131114	SRX209994	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-02	TARGET-30-PANLET-10A-01D Catch-131114 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0KW1ACXX120202.3.AGGTAAGG.C829.TARGET-30-PANLET-10A-01D.1.bam	SRR632085	@dbgap@:reads/SRP012002/SRS375958/SRX209994/SRR632085/SRR632085.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PANPVI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANPVI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANPVI-01A-01W	DNA	EFO	SRS083491	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PANPVI-01A-01W Solexa-24540 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	40.192	Solexa-24540	SRX091436	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-13	TARGET-30-PANPVI-01A-01W Solexa-24540 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613VWAAXX100413.1.C310.6258_1838-T.2.bam	SRR330351	@dbgap@:reads/SRP012002/SRS083491/SRX091436/SRR330351/SRR330351.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PANPVI.seg.txt	3
TARGET-30-PANPVI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANPVI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANPVI-01A-01W	DNA	EFO	SRS083491	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PANPVI-01A-01W Solexa-24540 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	40.192	Solexa-24540	SRX091436	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-13	TARGET-30-PANPVI-01A-01W Solexa-24540 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613VWAAXX100413.1.C310.6258_1838-T.2.bam	SRR330351	@dbgap@:reads/SRP012002/SRS083491/SRX091436/SRR330351/SRR330351.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PANPVI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANPVI-14A	organism part	EFO	Bone Marrow	NCIt	"Bone Marrow Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANPVI-14A-01W	DNA	EFO	SRS083490	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PANPVI-14A-01W Solexa-24541 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	40.2246666666667	Solexa-24541	SRX091438	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-13	TARGET-30-PANPVI-14A-01W Solexa-24541 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613VWAAXX100413.4.C310.6258_1838-N.2.bam	SRR330357	@dbgap@:reads/SRP012002/SRS083490/SRX091438/SRR330357/SRR330357.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PANPVI.seg.txt	3
TARGET-30-PANPVI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANPVI-14A	organism part	EFO	Bone Marrow	NCIt	"Bone Marrow Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANPVI-14A-01W	DNA	EFO	SRS083490	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PANPVI-14A-01W Solexa-24541 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	40.2246666666667	Solexa-24541	SRX091438	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-13	TARGET-30-PANPVI-14A-01W Solexa-24541 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613VWAAXX100413.4.C310.6258_1838-N.2.bam	SRR330357	@dbgap@:reads/SRP012002/SRS083490/SRX091438/SRR330357/SRR330357.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PANRHJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANRHJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANRHJ-01A-01W	DNA	EFO	SRS083642	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PANRHJ-01A-01W Solexa-24406 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	45.528	Solexa-24406	SRX092141	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-14	TARGET-30-PANRHJ-01A-01W Solexa-24406 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613UYAAXX100414.7.C310.6258_3728-T.4.bam	SRR331806	@dbgap@:reads/SRP012002/SRS083642/SRX092141/SRR331806/SRR331806.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PANRHJ.seg.txt	3
TARGET-30-PANRHJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANRHJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANRHJ-01A-01W	DNA	EFO	SRS083642	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PANRHJ-01A-01W Solexa-24406 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	45.528	Solexa-24406	SRX092141	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-14	TARGET-30-PANRHJ-01A-01W Solexa-24406 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613UYAAXX100414.7.C310.6258_3728-T.4.bam	SRR331806	@dbgap@:reads/SRP012002/SRS083642/SRX092141/SRR331806/SRR331806.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PANRHJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANRHJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANRHJ-10A-01W	DNA	EFO	SRS083641	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PANRHJ-10A-01W Solexa-24407 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	42.96	Solexa-24407	SRX092063	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-14	TARGET-30-PANRHJ-10A-01W Solexa-24407 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613UYAAXX100414.8.C310.6258_3728-N.3.bam	SRR331498	@dbgap@:reads/SRP012002/SRS083641/SRX092063/SRR331498/SRR331498.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PANRHJ.seg.txt	3
TARGET-30-PANRHJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANRHJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANRHJ-10A-01W	DNA	EFO	SRS083641	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PANRHJ-10A-01W Solexa-24407 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	42.96	Solexa-24407	SRX092063	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-14	TARGET-30-PANRHJ-10A-01W Solexa-24407 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613UYAAXX100414.8.C310.6258_3728-N.3.bam	SRR331498	@dbgap@:reads/SRP012002/SRS083641/SRX092063/SRR331498/SRR331498.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PANRVJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANRVJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANRVJ-01A-01D	DNA	EFO	SRS375969		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PANRVJ-01A-01D Catch-131137 library	PAIRED	GENOMIC	WXS	Hybrid Selection	155	59.3752290909091	Catch-131137	SRX210889	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PANRVJ-01A-01D Catch-131137 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DF6ACXX120206.3.GCCGTCGA.C829.TARGET-30-PANRVJ-01A-01D.1.bam	SRR634740	@dbgap@:reads/SRP012002/SRS375969/SRX210889/SRR634740/SRR634740.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PANRVJ.seg.txt	3
TARGET-30-PANRVJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANRVJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANRVJ-01A-01D	DNA	EFO	SRS375969		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PANRVJ-01A-01D Catch-131137 library	PAIRED	GENOMIC	WXS	Hybrid Selection	155	59.3752290909091	Catch-131137	SRX210889	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PANRVJ-01A-01D Catch-131137 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DF6ACXX120206.3.GCCGTCGA.C829.TARGET-30-PANRVJ-01A-01D.1.bam	SRR634740	@dbgap@:reads/SRP012002/SRS375969/SRX210889/SRR634740/SRR634740.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PANRVJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANRVJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANRVJ-10A-01D	DNA	EFO	SRS375968		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PANRVJ-10A-01D Catch-131140 library	PAIRED	GENOMIC	WXS	Hybrid Selection	159	58.9549609090909	Catch-131140	SRX210797	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PANRVJ-10A-01D Catch-131140 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DF6ACXX120206.8.GACCTAAC.C829.TARGET-30-PANRVJ-10A-01D.1.bam	SRR634172	@dbgap@:reads/SRP012002/SRS375968/SRX210797/SRR634172/SRR634172.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PANRVJ.seg.txt	3
TARGET-30-PANRVJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANRVJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANRVJ-10A-01D	DNA	EFO	SRS375968		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PANRVJ-10A-01D Catch-131140 library	PAIRED	GENOMIC	WXS	Hybrid Selection	159	58.9549609090909	Catch-131140	SRX210797	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PANRVJ-10A-01D Catch-131140 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DF6ACXX120206.8.GACCTAAC.C829.TARGET-30-PANRVJ-10A-01D.1.bam	SRR634172	@dbgap@:reads/SRP012002/SRS375968/SRX210797/SRR634172/SRR634172.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PANSBN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANSBN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANSBN-01A-01D	DNA	EFO	SRS379560		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PANSBN-01A-01D Catch-131168 library	PAIRED	GENOMIC	WXS	Hybrid Selection	163	64.9053577272727	Catch-131168	SRX209841	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PANSBN-01A-01D Catch-131168 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DF6ACXX120206.7.ATTATGTT.C829.TARGET-30-PANSBN-01A-01D.1.bam	SRR631368	@dbgap@:reads/SRP012002/SRS379560/SRX209841/SRR631368/SRR631368.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PANSBN.seg.txt	3
TARGET-30-PANSBN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANSBN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANSBN-01A-01D	DNA	EFO	SRS379560		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PANSBN-01A-01D Catch-131168 library	PAIRED	GENOMIC	WXS	Hybrid Selection	163	64.9053577272727	Catch-131168	SRX209841	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PANSBN-01A-01D Catch-131168 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DF6ACXX120206.7.ATTATGTT.C829.TARGET-30-PANSBN-01A-01D.1.bam	SRR631368	@dbgap@:reads/SRP012002/SRS379560/SRX209841/SRR631368/SRR631368.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PANSBN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANSBN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANSBN-10A-01D	DNA	EFO	SRS379559		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PANSBN-10A-01D Catch-131188 library	PAIRED	GENOMIC	WXS	Hybrid Selection	163	70.59003	Catch-131188	SRX209837	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PANSBN-10A-01D Catch-131188 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DF6ACXX120206.5.GATATCCA.C829.TARGET-30-PANSBN-10A-01D.1.bam	SRR631597	@dbgap@:reads/SRP012002/SRS379559/SRX209837/SRR631597/SRR631597.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PANSBN.seg.txt	3
TARGET-30-PANSBN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANSBN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANSBN-10A-01D	DNA	EFO	SRS379559		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PANSBN-10A-01D Catch-131188 library	PAIRED	GENOMIC	WXS	Hybrid Selection	163	70.59003	Catch-131188	SRX209837	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PANSBN-10A-01D Catch-131188 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DF6ACXX120206.5.GATATCCA.C829.TARGET-30-PANSBN-10A-01D.1.bam	SRR631597	@dbgap@:reads/SRP012002/SRS379559/SRX209837/SRR631597/SRR631597.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PANUIF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANUIF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANUIF-01A-01D	DNA	EFO	SRS380204		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PANUIF-01A-01D Catch-131173 library	PAIRED	GENOMIC	WXS	Hybrid Selection	161	65.5234395454546	Catch-131173	SRX211192	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PANUIF-01A-01D Catch-131173 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DF6ACXX120206.8.CGCCTTCC.C829.TARGET-30-PANUIF-01A-01D.1.bam	SRR636504	@dbgap@:reads/SRP012002/SRS380204/SRX211192/SRR636504/SRR636504.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PANUIF.seg.txt	3
TARGET-30-PANUIF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANUIF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANUIF-01A-01D	DNA	EFO	SRS380204		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PANUIF-01A-01D Catch-131173 library	PAIRED	GENOMIC	WXS	Hybrid Selection	161	65.5234395454546	Catch-131173	SRX211192	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PANUIF-01A-01D Catch-131173 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DF6ACXX120206.8.CGCCTTCC.C829.TARGET-30-PANUIF-01A-01D.1.bam	SRR636504	@dbgap@:reads/SRP012002/SRS380204/SRX211192/SRR636504/SRR636504.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PANUIF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANUIF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANUIF-10A-01D	DNA	EFO	SRS379877		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PANUIF-10A-01D Catch-131159 library	PAIRED	GENOMIC	WXS	Hybrid Selection	157	60.7052527272727	Catch-131159	SRX210569	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PANUIF-10A-01D Catch-131159 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DF6ACXX120206.6.TCTCGGTC.C829.TARGET-30-PANUIF-10A-01D.1.bam	SRR632916	@dbgap@:reads/SRP012002/SRS379877/SRX210569/SRR632916/SRR632916.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PANUIF.seg.txt	3
TARGET-30-PANUIF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANUIF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANUIF-10A-01D	DNA	EFO	SRS379877		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PANUIF-10A-01D Catch-131159 library	PAIRED	GENOMIC	WXS	Hybrid Selection	157	60.7052527272727	Catch-131159	SRX210569	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PANUIF-10A-01D Catch-131159 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DF6ACXX120206.6.TCTCGGTC.C829.TARGET-30-PANUIF-10A-01D.1.bam	SRR632916	@dbgap@:reads/SRP012002/SRS379877/SRX210569/SRR632916/SRR632916.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PANUKV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANUKV-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANUKV-01A-01W	DNA	EFO	SRS083496	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PANUKV-01A-01W Solexa-24542 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	40.5376666666667	Solexa-24542	SRX092084	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-09	TARGET-30-PANUKV-01A-01W Solexa-24542 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613V9AAXX100409.1.C310.6258_1881-T.3.bam	SRR331552	@dbgap@:reads/SRP012002/SRS083496/SRX092084/SRR331552/SRR331552.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PANUKV.seg.txt	3
TARGET-30-PANUKV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANUKV-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANUKV-01A-01W	DNA	EFO	SRS083496	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PANUKV-01A-01W Solexa-24542 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	40.5376666666667	Solexa-24542	SRX092084	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-09	TARGET-30-PANUKV-01A-01W Solexa-24542 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613V9AAXX100409.1.C310.6258_1881-T.3.bam	SRR331552	@dbgap@:reads/SRP012002/SRS083496/SRX092084/SRR331552/SRR331552.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PANUKV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANUKV-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANUKV-10A-01W	DNA	EFO	SRS083495	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PANUKV-10A-01W Solexa-24543 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	40.8953333333333	Solexa-24543	SRX092128	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-09	TARGET-30-PANUKV-10A-01W Solexa-24543 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613V9AAXX100409.4.C310.6258_1881-N.3.bam	SRR331765	@dbgap@:reads/SRP012002/SRS083495/SRX092128/SRR331765/SRR331765.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PANUKV.seg.txt	3
TARGET-30-PANUKV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANUKV-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANUKV-10A-01W	DNA	EFO	SRS083495	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PANUKV-10A-01W Solexa-24543 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	40.8953333333333	Solexa-24543	SRX092128	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-09	TARGET-30-PANUKV-10A-01W Solexa-24543 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613V9AAXX100409.4.C310.6258_1881-N.3.bam	SRR331765	@dbgap@:reads/SRP012002/SRS083495/SRX092128/SRR331765/SRR331765.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PANWRR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANWRR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANWRR-01A-01D	DNA	EFO	SRS380084		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PANWRR-01A-01D Catch-131135 library	PAIRED	GENOMIC	WXS	Hybrid Selection	168	68.7615240909091	Catch-131135	SRX210963	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PANWRR-01A-01D Catch-131135 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DF6ACXX120206.1.GTCATCTA.C829.TARGET-30-PANWRR-01A-01D.1.bam	SRR634880	@dbgap@:reads/SRP012002/SRS380084/SRX210963/SRR634880/SRR634880.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PANWRR.seg.txt	3
TARGET-30-PANWRR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANWRR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANWRR-01A-01D	DNA	EFO	SRS380084		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PANWRR-01A-01D Catch-131135 library	PAIRED	GENOMIC	WXS	Hybrid Selection	168	68.7615240909091	Catch-131135	SRX210963	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PANWRR-01A-01D Catch-131135 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DF6ACXX120206.1.GTCATCTA.C829.TARGET-30-PANWRR-01A-01D.1.bam	SRR634880	@dbgap@:reads/SRP012002/SRS380084/SRX210963/SRR634880/SRR634880.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PANWRR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANWRR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANWRR-10A-01D	DNA	EFO	SRS379637		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PANWRR-10A-01D Catch-131150 library	PAIRED	GENOMIC	WXS	Hybrid Selection	158	67.7212059090909	Catch-131150	SRX210001	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PANWRR-10A-01D Catch-131150 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DBMACXX120206.2.TGTAATCA.C829.TARGET-30-PANWRR-10A-01D.1.bam	SRR632145	@dbgap@:reads/SRP012002/SRS379637/SRX210001/SRR632145/SRR632145.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PANWRR.seg.txt	3
TARGET-30-PANWRR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANWRR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANWRR-10A-01D	DNA	EFO	SRS379637		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PANWRR-10A-01D Catch-131150 library	PAIRED	GENOMIC	WXS	Hybrid Selection	158	67.7212059090909	Catch-131150	SRX210001	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PANWRR-10A-01D Catch-131150 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DBMACXX120206.2.TGTAATCA.C829.TARGET-30-PANWRR-10A-01D.1.bam	SRR632145	@dbgap@:reads/SRP012002/SRS379637/SRX210001/SRR632145/SRR632145.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PANXJL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANXJL-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANXJL-01A-01D	DNA	EFO	SRS380069		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PANXJL-01A-01D Catch-131183 library	PAIRED	GENOMIC	WXS	Hybrid Selection	168	74.0340704545455	Catch-131183	SRX210881	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PANXJL-01A-01D Catch-131183 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DBMACXX120206.6.GAACCTAG.C829.TARGET-30-PANXJL-01A-01D.1.bam	SRR634715	@dbgap@:reads/SRP012002/SRS380069/SRX210881/SRR634715/SRR634715.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PANXJL.seg.txt	3
TARGET-30-PANXJL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANXJL-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANXJL-01A-01D	DNA	EFO	SRS380069		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PANXJL-01A-01D Catch-131183 library	PAIRED	GENOMIC	WXS	Hybrid Selection	168	74.0340704545455	Catch-131183	SRX210881	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PANXJL-01A-01D Catch-131183 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DBMACXX120206.6.GAACCTAG.C829.TARGET-30-PANXJL-01A-01D.1.bam	SRR634715	@dbgap@:reads/SRP012002/SRS380069/SRX210881/SRR634715/SRR634715.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PANXJL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANXJL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANXJL-10A-01D	DNA	EFO	SRS380169		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PANXJL-10A-01D Catch-131186 library	PAIRED	GENOMIC	WXS	Hybrid Selection	163	64.8385927272727	Catch-131186	SRX211060	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PANXJL-10A-01D Catch-131186 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DBMACXX120206.2.GTCCACAG.C829.TARGET-30-PANXJL-10A-01D.1.bam	SRR635248	@dbgap@:reads/SRP012002/SRS380169/SRX211060/SRR635248/SRR635248.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PANXJL.seg.txt	3
TARGET-30-PANXJL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANXJL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANXJL-10A-01D	DNA	EFO	SRS380169		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PANXJL-10A-01D Catch-131186 library	PAIRED	GENOMIC	WXS	Hybrid Selection	163	64.8385927272727	Catch-131186	SRX211060	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PANXJL-10A-01D Catch-131186 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DBMACXX120206.2.GTCCACAG.C829.TARGET-30-PANXJL-10A-01D.1.bam	SRR635248	@dbgap@:reads/SRP012002/SRS380169/SRX211060/SRR635248/SRR635248.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PANYBL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANYBL-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANYBL-01A-01W	DNA	EFO	SRS083508	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PANYBL-01A-01W Solexa-39845 library	PAIRED	GENOMIC	WXS	Hybrid Selection	230	39.6735	Solexa-39845	SRX091349	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-08-23	TARGET-30-PANYBL-01A-01W Solexa-39845 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.8.0	broadinstitute.org:Protocol:WXS-ReadAlign:01	61PEBAAXX100823.3.C310.6258_1942-T.1.bam	SRR330200	@dbgap@:reads/SRP012002/SRS083508/SRX091349/SRR330200/SRR330200.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PANYBL.seg.txt	3
TARGET-30-PANYBL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANYBL-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANYBL-01A-01W	DNA	EFO	SRS083508	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PANYBL-01A-01W Solexa-39845 library	PAIRED	GENOMIC	WXS	Hybrid Selection	230	39.6735	Solexa-39845	SRX091349	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-08-23	TARGET-30-PANYBL-01A-01W Solexa-39845 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.8.0	broadinstitute.org:Protocol:WXS-ReadAlign:01	61PEBAAXX100823.3.C310.6258_1942-T.1.bam	SRR330200	@dbgap@:reads/SRP012002/SRS083508/SRX091349/SRR330200/SRR330200.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PANYBL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANYBL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANYBL-10A-01W	DNA	EFO	SRS083507	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PANYBL-10A-01W Solexa-39855 library	PAIRED	GENOMIC	WXS	Hybrid Selection	230	46.7235	Solexa-39855	SRX092086	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-08-19	TARGET-30-PANYBL-10A-01W Solexa-39855 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.8.0	broadinstitute.org:Protocol:WXS-ReadAlign:01	61PLMAAXX100819.1.C310.6258_1942-N.2.bam	SRR331557	@dbgap@:reads/SRP012002/SRS083507/SRX092086/SRR331557/SRR331557.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PANYBL.seg.txt	3
TARGET-30-PANYBL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANYBL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANYBL-10A-01W	DNA	EFO	SRS083507	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PANYBL-10A-01W Solexa-39855 library	PAIRED	GENOMIC	WXS	Hybrid Selection	230	46.7235	Solexa-39855	SRX092086	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-08-19	TARGET-30-PANYBL-10A-01W Solexa-39855 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.8.0	broadinstitute.org:Protocol:WXS-ReadAlign:01	61PLMAAXX100819.1.C310.6258_1942-N.2.bam	SRR331557	@dbgap@:reads/SRP012002/SRS083507/SRX092086/SRR331557/SRR331557.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PANYGR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANYGR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANYGR-01A-01W	DNA	EFO	SRS083504	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PANYGR-01A-01W Solexa-24544 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	37.3463333333333	Solexa-24544	SRX092087	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-07	TARGET-30-PANYGR-01A-01W Solexa-24544 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	6141JAAXX100407.1.C310.6258_1931-T.2.bam	SRR331559	@dbgap@:reads/SRP012002/SRS083504/SRX092087/SRR331559/SRR331559.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PANYGR.seg.txt	3
TARGET-30-PANYGR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANYGR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANYGR-01A-01W	DNA	EFO	SRS083504	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PANYGR-01A-01W Solexa-24544 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	37.3463333333333	Solexa-24544	SRX092087	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-07	TARGET-30-PANYGR-01A-01W Solexa-24544 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	6141JAAXX100407.1.C310.6258_1931-T.2.bam	SRR331559	@dbgap@:reads/SRP012002/SRS083504/SRX092087/SRR331559/SRR331559.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PANYGR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANYGR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANYGR-10A-01W	DNA	EFO	SRS083503	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PANYGR-10A-01W Solexa-24587 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	42.8126666666667	Solexa-24587	SRX091351	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-07	TARGET-30-PANYGR-10A-01W Solexa-24587 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	6141JAAXX100407.4.C310.6258_1931-N.2.bam	SRR330203	@dbgap@:reads/SRP012002/SRS083503/SRX091351/SRR330203/SRR330203.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PANYGR.seg.txt	3
TARGET-30-PANYGR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANYGR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANYGR-10A-01W	DNA	EFO	SRS083503	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PANYGR-10A-01W Solexa-24587 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	42.8126666666667	Solexa-24587	SRX091351	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-07	TARGET-30-PANYGR-10A-01W Solexa-24587 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	6141JAAXX100407.4.C310.6258_1931-N.2.bam	SRR330203	@dbgap@:reads/SRP012002/SRS083503/SRX091351/SRR330203/SRR330203.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PANZPV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANZPV-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANZPV-01A-01W	DNA	EFO	SRS083512	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PANZPV-01A-01W Solexa-41721 library	PAIRED	GENOMIC	WXS	Hybrid Selection	230	69.787	Solexa-41721	SRX091350	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2010-08-30	TARGET-30-PANZPV-01A-01W Solexa-41721 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.8.0	broadinstitute.org:Protocol:WXS-ReadAlign:01	203A4ABXX100830.1.C310.6258_1953-T.1.bam	SRR330202	@dbgap@:reads/SRP012002/SRS083512/SRX091350/SRR330202/SRR330202.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PANZPV.seg.txt	3
TARGET-30-PANZPV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANZPV-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANZPV-01A-01W	DNA	EFO	SRS083512	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PANZPV-01A-01W Solexa-41721 library	PAIRED	GENOMIC	WXS	Hybrid Selection	230	69.787	Solexa-41721	SRX091350	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2010-08-30	TARGET-30-PANZPV-01A-01W Solexa-41721 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.8.0	broadinstitute.org:Protocol:WXS-ReadAlign:01	203A4ABXX100830.1.C310.6258_1953-T.1.bam	SRR330202	@dbgap@:reads/SRP012002/SRS083512/SRX091350/SRR330202/SRR330202.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PANZPV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANZPV-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANZPV-10A-01W	DNA	EFO	SRS083511	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PANZPV-10A-01W Solexa-41751 library	PAIRED	GENOMIC	WXS	Hybrid Selection	230	54.41	Solexa-41751	SRX091352	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2010-08-30	TARGET-30-PANZPV-10A-01W Solexa-41751 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.8.0	broadinstitute.org:Protocol:WXS-ReadAlign:01	203A4ABXX100830.5.C310.6258_1953-N.1.bam	SRR330206	@dbgap@:reads/SRP012002/SRS083511/SRX091352/SRR330206/SRR330206.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PANZPV.seg.txt	3
TARGET-30-PANZPV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANZPV-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANZPV-10A-01W	DNA	EFO	SRS083511	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PANZPV-10A-01W Solexa-41751 library	PAIRED	GENOMIC	WXS	Hybrid Selection	230	54.41	Solexa-41751	SRX091352	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2010-08-30	TARGET-30-PANZPV-10A-01W Solexa-41751 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.8.0	broadinstitute.org:Protocol:WXS-ReadAlign:01	203A4ABXX100830.5.C310.6258_1953-N.1.bam	SRR330206	@dbgap@:reads/SRP012002/SRS083511/SRX091352/SRR330206/SRR330206.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PANZVU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANZVU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANZVU-01A-01W	DNA	EFO	SRS083514	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PANZVU-01A-01W Solexa-39891 library	PAIRED	GENOMIC	WXS	Hybrid Selection	230	41.7765	Solexa-39891	SRX091348	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-08-23	TARGET-30-PANZVU-01A-01W Solexa-39891 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.8.0	broadinstitute.org:Protocol:WXS-ReadAlign:01	61PEBAAXX100823.5.C310.6258_1956-T.1.bam	SRR330198	@dbgap@:reads/SRP012002/SRS083514/SRX091348/SRR330198/SRR330198.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PANZVU.seg.txt	3
TARGET-30-PANZVU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANZVU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANZVU-01A-01W	DNA	EFO	SRS083514	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PANZVU-01A-01W Solexa-39891 library	PAIRED	GENOMIC	WXS	Hybrid Selection	230	41.7765	Solexa-39891	SRX091348	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-08-23	TARGET-30-PANZVU-01A-01W Solexa-39891 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.8.0	broadinstitute.org:Protocol:WXS-ReadAlign:01	61PEBAAXX100823.5.C310.6258_1956-T.1.bam	SRR330198	@dbgap@:reads/SRP012002/SRS083514/SRX091348/SRR330198/SRR330198.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PANZVU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANZVU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANZVU-10A-01W	DNA	EFO	SRS083513	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PANZVU-10A-01W Solexa-39901 library	PAIRED	GENOMIC	WXS	Hybrid Selection	230	38.964	Solexa-39901	SRX092085	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-08-17	TARGET-30-PANZVU-10A-01W Solexa-39901 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.8.0	broadinstitute.org:Protocol:WXS-ReadAlign:01	62569AAXX100817.5.C310.6258_1956-N.2.bam	SRR331555	@dbgap@:reads/SRP012002/SRS083513/SRX092085/SRR331555/SRR331555.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PANZVU.seg.txt	3
TARGET-30-PANZVU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PANZVU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PANZVU-10A-01W	DNA	EFO	SRS083513	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PANZVU-10A-01W Solexa-39901 library	PAIRED	GENOMIC	WXS	Hybrid Selection	230	38.964	Solexa-39901	SRX092085	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-08-17	TARGET-30-PANZVU-10A-01W Solexa-39901 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.8.0	broadinstitute.org:Protocol:WXS-ReadAlign:01	62569AAXX100817.5.C310.6258_1956-N.2.bam	SRR331555	@dbgap@:reads/SRP012002/SRS083513/SRX092085/SRR331555/SRR331555.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAPBGH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPBGH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPBGH-01A-01W	DNA	EFO	SRS083518	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPBGH-01A-01W Solexa-24549 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	39.6593333333333	Solexa-24549	SRX092083	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-09	TARGET-30-PAPBGH-01A-01W Solexa-24549 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	61DYLAAXX100409.1.C310.6258_1972-T.4.bam	SRR331549	@dbgap@:reads/SRP012002/SRS083518/SRX092083/SRR331549/SRR331549.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAPBGH.seg.txt	3
TARGET-30-PAPBGH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPBGH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPBGH-01A-01W	DNA	EFO	SRS083518	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPBGH-01A-01W Solexa-24549 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	39.6593333333333	Solexa-24549	SRX092083	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-09	TARGET-30-PAPBGH-01A-01W Solexa-24549 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	61DYLAAXX100409.1.C310.6258_1972-T.4.bam	SRR331549	@dbgap@:reads/SRP012002/SRS083518/SRX092083/SRR331549/SRR331549.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAPBGH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPBGH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPBGH-10A-01W	DNA	EFO	SRS083517	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPBGH-10A-01W Solexa-24550 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	39.11	Solexa-24550	SRX091410	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-09	TARGET-30-PAPBGH-10A-01W Solexa-24550 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	61DYLAAXX100409.4.C310.6258_1972-N.3.bam	SRR330219	@dbgap@:reads/SRP012002/SRS083517/SRX091410/SRR330219/SRR330219.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAPBGH.seg.txt	3
TARGET-30-PAPBGH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPBGH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPBGH-10A-01W	DNA	EFO	SRS083517	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPBGH-10A-01W Solexa-24550 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	39.11	Solexa-24550	SRX091410	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-09	TARGET-30-PAPBGH-10A-01W Solexa-24550 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	61DYLAAXX100409.4.C310.6258_1972-N.3.bam	SRR330219	@dbgap@:reads/SRP012002/SRS083517/SRX091410/SRR330219/SRR330219.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAPBJE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPBJE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPBJE-01A-01D	DNA	EFO	SRS380168		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPBJE-01A-01D Catch-131194 library	PAIRED	GENOMIC	WXS	Hybrid Selection	163	67.9780222727273	Catch-131194	SRX211059	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PAPBJE-01A-01D Catch-131194 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DF6ACXX120206.7.CCAGAGCT.C829.TARGET-30-PAPBJE-01A-01D.1.bam	SRR635541	@dbgap@:reads/SRP012002/SRS380168/SRX211059/SRR635541/SRR635541.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAPBJE.seg.txt	3
TARGET-30-PAPBJE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPBJE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPBJE-01A-01D	DNA	EFO	SRS380168		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPBJE-01A-01D Catch-131194 library	PAIRED	GENOMIC	WXS	Hybrid Selection	163	67.9780222727273	Catch-131194	SRX211059	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PAPBJE-01A-01D Catch-131194 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DF6ACXX120206.7.CCAGAGCT.C829.TARGET-30-PAPBJE-01A-01D.1.bam	SRR635541	@dbgap@:reads/SRP012002/SRS380168/SRX211059/SRR635541/SRR635541.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAPBJE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPBJE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPBJE-10A-01D	DNA	EFO	SRS380052		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPBJE-10A-01D Catch-131169 library	PAIRED	GENOMIC	WXS	Hybrid Selection	158	62.2469086363636	Catch-131169	SRX210849	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PAPBJE-10A-01D Catch-131169 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DBMACXX120206.6.ATAGCGTC.C829.TARGET-30-PAPBJE-10A-01D.1.bam	SRR634606	@dbgap@:reads/SRP012002/SRS380052/SRX210849/SRR634606/SRR634606.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAPBJE.seg.txt	3
TARGET-30-PAPBJE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPBJE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPBJE-10A-01D	DNA	EFO	SRS380052		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPBJE-10A-01D Catch-131169 library	PAIRED	GENOMIC	WXS	Hybrid Selection	158	62.2469086363636	Catch-131169	SRX210849	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PAPBJE-10A-01D Catch-131169 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DBMACXX120206.6.ATAGCGTC.C829.TARGET-30-PAPBJE-10A-01D.1.bam	SRR634606	@dbgap@:reads/SRP012002/SRS380052/SRX210849/SRR634606/SRR634606.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAPBJT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPBJT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPBJT-01A-01W	DNA	EFO	SRS083524	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPBJT-01A-01W Solexa-24590 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	40.5883333333333	Solexa-24590	SRX091408	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-12	TARGET-30-PAPBJT-01A-01W Solexa-24590 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	61JKFAAXX100412.1.C310.6258_1987-T.2.bam	SRR330213	@dbgap@:reads/SRP012002/SRS083524/SRX091408/SRR330213/SRR330213.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAPBJT.seg.txt	3
TARGET-30-PAPBJT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPBJT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPBJT-01A-01W	DNA	EFO	SRS083524	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPBJT-01A-01W Solexa-24590 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	40.5883333333333	Solexa-24590	SRX091408	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-12	TARGET-30-PAPBJT-01A-01W Solexa-24590 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	61JKFAAXX100412.1.C310.6258_1987-T.2.bam	SRR330213	@dbgap@:reads/SRP012002/SRS083524/SRX091408/SRR330213/SRR330213.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAPBJT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPBJT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPBJT-10A-01W	DNA	EFO	SRS083523	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPBJT-10A-01W Solexa-24591 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	40.973	Solexa-24591	SRX091407	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-12	TARGET-30-PAPBJT-10A-01W Solexa-24591 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	61JKFAAXX100412.4.C310.6258_1987-N.3.bam	SRR330210	@dbgap@:reads/SRP012002/SRS083523/SRX091407/SRR330210/SRR330210.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAPBJT.seg.txt	3
TARGET-30-PAPBJT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPBJT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPBJT-10A-01W	DNA	EFO	SRS083523	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPBJT-10A-01W Solexa-24591 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	40.973	Solexa-24591	SRX091407	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-12	TARGET-30-PAPBJT-10A-01W Solexa-24591 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	61JKFAAXX100412.4.C310.6258_1987-N.3.bam	SRR330210	@dbgap@:reads/SRP012002/SRS083523/SRX091407/SRR330210/SRR330210.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAPBZI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPBZI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPBZI-01A-01W	DNA	EFO	SRS083520	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPBZI-01A-01W Solexa-24551 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	42.2216666666667	Solexa-24551	SRX091406	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-09	TARGET-30-PAPBZI-01A-01W Solexa-24551 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613T8AAXX100409.1.C310.6258_1977-T.2.bam	SRR330207	@dbgap@:reads/SRP012002/SRS083520/SRX091406/SRR330207/SRR330207.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAPBZI.seg.txt	3
TARGET-30-PAPBZI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPBZI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPBZI-01A-01W	DNA	EFO	SRS083520	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPBZI-01A-01W Solexa-24551 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	42.2216666666667	Solexa-24551	SRX091406	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-09	TARGET-30-PAPBZI-01A-01W Solexa-24551 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613T8AAXX100409.1.C310.6258_1977-T.2.bam	SRR330207	@dbgap@:reads/SRP012002/SRS083520/SRX091406/SRR330207/SRR330207.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAPBZI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPBZI-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPBZI-10A-01W	DNA	EFO	SRS083519	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPBZI-10A-01W Solexa-24589 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	40.021	Solexa-24589	SRX091409	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-09	TARGET-30-PAPBZI-10A-01W Solexa-24589 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613T8AAXX100409.4.C310.6258_1977-N.2.bam	SRR330216	@dbgap@:reads/SRP012002/SRS083519/SRX091409/SRR330216/SRR330216.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAPBZI.seg.txt	3
TARGET-30-PAPBZI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPBZI-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPBZI-10A-01W	DNA	EFO	SRS083519	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPBZI-10A-01W Solexa-24589 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	40.021	Solexa-24589	SRX091409	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-09	TARGET-30-PAPBZI-10A-01W Solexa-24589 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613T8AAXX100409.4.C310.6258_1977-N.2.bam	SRR330216	@dbgap@:reads/SRP012002/SRS083519/SRX091409/SRR330216/SRR330216.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAPCTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPCTS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPCTS-01A-01D	DNA	EFO	SRS375441		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPCTS-01A-01D Catch-131120 library	PAIRED	GENOMIC	WXS	Hybrid Selection	157	59.6217586363637	Catch-131120	SRX211110	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-02	TARGET-30-PAPCTS-01A-01D Catch-131120 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0KW1ACXX120202.6.TCTGGCGA.C829.TARGET-30-PAPCTS-01A-01D.1.bam	SRR635845	@dbgap@:reads/SRP012002/SRS375441/SRX211110/SRR635845/SRR635845.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAPCTS.seg.txt	3
TARGET-30-PAPCTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPCTS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPCTS-01A-01D	DNA	EFO	SRS375441		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPCTS-01A-01D Catch-131120 library	PAIRED	GENOMIC	WXS	Hybrid Selection	157	59.6217586363637	Catch-131120	SRX211110	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-02	TARGET-30-PAPCTS-01A-01D Catch-131120 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0KW1ACXX120202.6.TCTGGCGA.C829.TARGET-30-PAPCTS-01A-01D.1.bam	SRR635845	@dbgap@:reads/SRP012002/SRS375441/SRX211110/SRR635845/SRR635845.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAPCTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPCTS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPCTS-10A-01D	DNA	EFO	SRS375440		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPCTS-10A-01D Catch-131151 library	PAIRED	GENOMIC	WXS	Hybrid Selection	162	59.8557095454545	Catch-131151	SRX210966	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PAPCTS-10A-01D Catch-131151 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DF6ACXX120206.2.TCGCTAGA.C829.TARGET-30-PAPCTS-10A-01D.1.bam	SRR635137	@dbgap@:reads/SRP012002/SRS375440/SRX210966/SRR635137/SRR635137.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAPCTS.seg.txt	3
TARGET-30-PAPCTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPCTS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPCTS-10A-01D	DNA	EFO	SRS375440		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPCTS-10A-01D Catch-131151 library	PAIRED	GENOMIC	WXS	Hybrid Selection	162	59.8557095454545	Catch-131151	SRX210966	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PAPCTS-10A-01D Catch-131151 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DF6ACXX120206.2.TCGCTAGA.C829.TARGET-30-PAPCTS-10A-01D.1.bam	SRR635137	@dbgap@:reads/SRP012002/SRS375440/SRX210966/SRR635137/SRR635137.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAPEFE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPEFE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPEFE-01A-01W	DNA	EFO	SRS083644	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPEFE-01A-01W Solexa-24408 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	44.063	Solexa-24408	SRX092140	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-20	TARGET-30-PAPEFE-01A-01W Solexa-24408 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613W9AAXX100420.1.C310.6258_3753-T.6.bam	SRR331803	@dbgap@:reads/SRP012002/SRS083644/SRX092140/SRR331803/SRR331803.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAPEFE.seg.txt	3
TARGET-30-PAPEFE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPEFE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPEFE-01A-01W	DNA	EFO	SRS083644	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPEFE-01A-01W Solexa-24408 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	44.063	Solexa-24408	SRX092140	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-20	TARGET-30-PAPEFE-01A-01W Solexa-24408 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613W9AAXX100420.1.C310.6258_3753-T.6.bam	SRR331803	@dbgap@:reads/SRP012002/SRS083644/SRX092140/SRR331803/SRR331803.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAPEFE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPEFE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPEFE-10A-01W	DNA	EFO	SRS083643	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPEFE-10A-01W Solexa-24428 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	42.9346666666667	Solexa-24428	SRX091414	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-20	TARGET-30-PAPEFE-10A-01W Solexa-24428 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613W9AAXX100420.4.C310.6258_3753-N.5.bam	SRR330225	@dbgap@:reads/SRP012002/SRS083643/SRX091414/SRR330225/SRR330225.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAPEFE.seg.txt	3
TARGET-30-PAPEFE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPEFE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPEFE-10A-01W	DNA	EFO	SRS083643	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPEFE-10A-01W Solexa-24428 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	42.9346666666667	Solexa-24428	SRX091414	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-20	TARGET-30-PAPEFE-10A-01W Solexa-24428 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613W9AAXX100420.4.C310.6258_3753-N.5.bam	SRR330225	@dbgap@:reads/SRP012002/SRS083643/SRX091414/SRR330225/SRR330225.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAPHPE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPHPE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPHPE-01A-01W	DNA	EFO	SRS083536	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPHPE-01A-01W Solexa-41720 library	PAIRED	GENOMIC	WXS	Hybrid Selection	127	51.26678	Solexa-41720	SRX210325	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2010-08-30	TARGET-30-PAPHPE-01A-01W Solexa-41720 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.8.0	broadinstitute.org:Protocol:WXS-ReadAlign:01	206EUABXX100830.1.C310.6258_2023-T.2.bam	SRR633394	@dbgap@:reads/SRP012002/SRS083536/SRX210325/SRR633394/SRR633394.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAPHPE.seg.txt	3
TARGET-30-PAPHPE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPHPE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPHPE-01A-01W	DNA	EFO	SRS083536	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPHPE-01A-01W Solexa-41720 library	PAIRED	GENOMIC	WXS	Hybrid Selection	127	51.26678	Solexa-41720	SRX210325	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2010-08-30	TARGET-30-PAPHPE-01A-01W Solexa-41720 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.8.0	broadinstitute.org:Protocol:WXS-ReadAlign:01	206EUABXX100830.1.C310.6258_2023-T.2.bam	SRR633394	@dbgap@:reads/SRP012002/SRS083536/SRX210325/SRR633394/SRR633394.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAPHPE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPHPE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPHPE-10A-01W	DNA	EFO	SRS083535	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPHPE-10A-01W Solexa-45418 library	PAIRED	GENOMIC	WXS	Hybrid Selection	129	46.10434	Solexa-45418	SRX212207	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2010-10-28	TARGET-30-PAPHPE-10A-01W Solexa-45418 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA 1.7.45	broadinstitute.org:Protocol:WXS-ReadAlign:01	801LYABXX101028.4.C310.6258_2023-N.5.bam	SRR639106	@dbgap@:reads/SRP012002/SRS083535/SRX212207/SRR639106/SRR639106.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAPHPE.seg.txt	3
TARGET-30-PAPHPE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPHPE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPHPE-10A-01W	DNA	EFO	SRS083535	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPHPE-10A-01W Solexa-45418 library	PAIRED	GENOMIC	WXS	Hybrid Selection	129	46.10434	Solexa-45418	SRX212207	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2010-10-28	TARGET-30-PAPHPE-10A-01W Solexa-45418 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA 1.7.45	broadinstitute.org:Protocol:WXS-ReadAlign:01	801LYABXX101028.4.C310.6258_2023-N.5.bam	SRR639106	@dbgap@:reads/SRP012002/SRS083535/SRX212207/SRR639106/SRR639106.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAPKWN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPKWN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPKWN-01A-01W	DNA	EFO	SRS083540	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPKWN-01A-01W Solexa-24553 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	38.6623333333333	Solexa-24553	SRX092117	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-14	TARGET-30-PAPKWN-01A-01W Solexa-24553 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613UYAAXX100414.1.C310.6258_2058-T.2.bam	SRR331563	@dbgap@:reads/SRP012002/SRS083540/SRX092117/SRR331563/SRR331563.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAPKWN.seg.txt	3
TARGET-30-PAPKWN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPKWN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPKWN-01A-01W	DNA	EFO	SRS083540	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPKWN-01A-01W Solexa-24553 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	38.6623333333333	Solexa-24553	SRX092117	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-14	TARGET-30-PAPKWN-01A-01W Solexa-24553 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613UYAAXX100414.1.C310.6258_2058-T.2.bam	SRR331563	@dbgap@:reads/SRP012002/SRS083540/SRX092117/SRR331563/SRR331563.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAPKWN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPKWN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPKWN-10A-01W	DNA	EFO	SRS083539	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPKWN-10A-01W Solexa-24554 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	40.8213333333333	Solexa-24554	SRX091442	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-14	TARGET-30-PAPKWN-10A-01W Solexa-24554 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613UYAAXX100414.4.C310.6258_2058-N.3.bam	SRR330367	@dbgap@:reads/SRP012002/SRS083539/SRX091442/SRR330367/SRR330367.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAPKWN.seg.txt	3
TARGET-30-PAPKWN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPKWN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPKWN-10A-01W	DNA	EFO	SRS083539	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPKWN-10A-01W Solexa-24554 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	40.8213333333333	Solexa-24554	SRX091442	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-14	TARGET-30-PAPKWN-10A-01W Solexa-24554 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613UYAAXX100414.4.C310.6258_2058-N.3.bam	SRR330367	@dbgap@:reads/SRP012002/SRS083539/SRX091442/SRR330367/SRR330367.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAPKXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPKXS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPKXS-01A-01D	DNA	EFO	SRS375460		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPKXS-01A-01D Catch-131141 library	PAIRED	GENOMIC	WXS	Hybrid Selection	156	66.0139504545455	Catch-131141	SRX210076	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PAPKXS-01A-01D Catch-131141 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DF6ACXX120206.1.GCAGCCGT.C829.TARGET-30-PAPKXS-01A-01D.1.bam	SRR632679	@dbgap@:reads/SRP012002/SRS375460/SRX210076/SRR632679/SRR632679.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAPKXS.seg.txt	3
TARGET-30-PAPKXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPKXS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPKXS-01A-01D	DNA	EFO	SRS375460		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPKXS-01A-01D Catch-131141 library	PAIRED	GENOMIC	WXS	Hybrid Selection	156	66.0139504545455	Catch-131141	SRX210076	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PAPKXS-01A-01D Catch-131141 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DF6ACXX120206.1.GCAGCCGT.C829.TARGET-30-PAPKXS-01A-01D.1.bam	SRR632679	@dbgap@:reads/SRP012002/SRS375460/SRX210076/SRR632679/SRR632679.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAPKXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPKXS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPKXS-10A-01D	DNA	EFO	SRS375459		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPKXS-10A-01D Catch-131121 library	PAIRED	GENOMIC	WXS	Hybrid Selection	162	59.0580254545455	Catch-131121	SRX210073	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PAPKXS-10A-01D Catch-131121 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DF6ACXX120206.5.AGGATCTA.C829.TARGET-30-PAPKXS-10A-01D.1.bam	SRR633174	@dbgap@:reads/SRP012002/SRS375459/SRX210073/SRR633174/SRR633174.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAPKXS.seg.txt	3
TARGET-30-PAPKXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPKXS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPKXS-10A-01D	DNA	EFO	SRS375459		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPKXS-10A-01D Catch-131121 library	PAIRED	GENOMIC	WXS	Hybrid Selection	162	59.0580254545455	Catch-131121	SRX210073	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PAPKXS-10A-01D Catch-131121 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DF6ACXX120206.5.AGGATCTA.C829.TARGET-30-PAPKXS-10A-01D.1.bam	SRR633174	@dbgap@:reads/SRP012002/SRS375459/SRX210073/SRR633174/SRR633174.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAPLSD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPLSD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPLSD-01A-01D	DNA	EFO	SRS379639		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPLSD-01A-01D Catch-131148 library	PAIRED	GENOMIC	WXS	Hybrid Selection	158	61.6435268181818	Catch-131148	SRX210011	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-02	TARGET-30-PAPLSD-01A-01D Catch-131148 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0KW1ACXX120202.2.TAAGCACA.C829.TARGET-30-PAPLSD-01A-01D.1.bam	SRR632185	@dbgap@:reads/SRP012002/SRS379639/SRX210011/SRR632185/SRR632185.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAPLSD.seg.txt	3
TARGET-30-PAPLSD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPLSD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPLSD-01A-01D	DNA	EFO	SRS379639		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPLSD-01A-01D Catch-131148 library	PAIRED	GENOMIC	WXS	Hybrid Selection	158	61.6435268181818	Catch-131148	SRX210011	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-02	TARGET-30-PAPLSD-01A-01D Catch-131148 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0KW1ACXX120202.2.TAAGCACA.C829.TARGET-30-PAPLSD-01A-01D.1.bam	SRR632185	@dbgap@:reads/SRP012002/SRS379639/SRX210011/SRR632185/SRR632185.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAPLSD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPLSD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPLSD-10A-01D	DNA	EFO	SRS380045		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPLSD-10A-01D Catch-131181 library	PAIRED	GENOMIC	WXS	Hybrid Selection	164	64.4443218181818	Catch-131181	SRX210816	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PAPLSD-10A-01D Catch-131181 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DBMACXX120206.8.GTCGCCTT.C829.TARGET-30-PAPLSD-10A-01D.1.bam	SRR634251	@dbgap@:reads/SRP012002/SRS380045/SRX210816/SRR634251/SRR634251.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAPLSD.seg.txt	3
TARGET-30-PAPLSD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPLSD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPLSD-10A-01D	DNA	EFO	SRS380045		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPLSD-10A-01D Catch-131181 library	PAIRED	GENOMIC	WXS	Hybrid Selection	164	64.4443218181818	Catch-131181	SRX210816	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PAPLSD-10A-01D Catch-131181 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DBMACXX120206.8.GTCGCCTT.C829.TARGET-30-PAPLSD-10A-01D.1.bam	SRR634251	@dbgap@:reads/SRP012002/SRS380045/SRX210816/SRR634251/SRR634251.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAPNEP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPNEP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPNEP-01A-01W	DNA	EFO	SRS255467	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPNEP-01A-01W Solexa-24410 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	41.742	Solexa-24410	SRX092135	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-09	TARGET-30-PAPNEP-01A-01W Solexa-24410 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613YWAAXX100409.1.C310.6258_2116-T.2.bam	SRR331779	@dbgap@:reads/SRP012002/SRS255467/SRX092135/SRR331779/SRR331779.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAPNEP.seg.txt	3
TARGET-30-PAPNEP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPNEP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPNEP-01A-01W	DNA	EFO	SRS255467	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPNEP-01A-01W Solexa-24410 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	41.742	Solexa-24410	SRX092135	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-09	TARGET-30-PAPNEP-01A-01W Solexa-24410 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613YWAAXX100409.1.C310.6258_2116-T.2.bam	SRR331779	@dbgap@:reads/SRP012002/SRS255467/SRX092135/SRR331779/SRR331779.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAPNEP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPNEP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPNEP-10A-01W	DNA	EFO	SRS083543	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPNEP-10A-01W Solexa-24411 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	42.7473333333333	Solexa-24411	SRX091374	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-09	TARGET-30-PAPNEP-10A-01W Solexa-24411 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613YWAAXX100409.4.C310.6258_2116-N.2.bam	SRR330166	@dbgap@:reads/SRP012002/SRS083543/SRX091374/SRR330166/SRR330166.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAPNEP.seg.txt	3
TARGET-30-PAPNEP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPNEP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPNEP-10A-01W	DNA	EFO	SRS083543	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPNEP-10A-01W Solexa-24411 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	42.7473333333333	Solexa-24411	SRX091374	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-09	TARGET-30-PAPNEP-10A-01W Solexa-24411 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613YWAAXX100409.4.C310.6258_2116-N.2.bam	SRR330166	@dbgap@:reads/SRP012002/SRS083543/SRX091374/SRR330166/SRR330166.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAPPKJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPPKJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPPKJ-01A-01W	DNA	EFO	SRS083542	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPPKJ-01A-01W Solexa-24555 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	39.9056666666667	Solexa-24555	SRX091440	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-12	TARGET-30-PAPPKJ-01A-01W Solexa-24555 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613YKAAXX100412.1.C310.6258_2074-T.2.bam	SRR330363	@dbgap@:reads/SRP012002/SRS083542/SRX091440/SRR330363/SRR330363.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAPPKJ.seg.txt	3
TARGET-30-PAPPKJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPPKJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPPKJ-01A-01W	DNA	EFO	SRS083542	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPPKJ-01A-01W Solexa-24555 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	39.9056666666667	Solexa-24555	SRX091440	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-12	TARGET-30-PAPPKJ-01A-01W Solexa-24555 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613YKAAXX100412.1.C310.6258_2074-T.2.bam	SRR330363	@dbgap@:reads/SRP012002/SRS083542/SRX091440/SRR330363/SRR330363.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAPPKJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPPKJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPPKJ-10A-01W	DNA	EFO	SRS083541	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPPKJ-10A-01W Solexa-24593 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	39.7016666666667	Solexa-24593	SRX091443	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-12	TARGET-30-PAPPKJ-10A-01W Solexa-24593 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613YKAAXX100412.4.C310.6258_2074-N.2.bam	SRR330370	@dbgap@:reads/SRP012002/SRS083541/SRX091443/SRR330370/SRR330370.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAPPKJ.seg.txt	3
TARGET-30-PAPPKJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPPKJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPPKJ-10A-01W	DNA	EFO	SRS083541	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPPKJ-10A-01W Solexa-24593 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	39.7016666666667	Solexa-24593	SRX091443	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-12	TARGET-30-PAPPKJ-10A-01W Solexa-24593 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	613YKAAXX100412.4.C310.6258_2074-N.2.bam	SRR330370	@dbgap@:reads/SRP012002/SRS083541/SRX091443/SRR330370/SRR330370.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAPREJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPREJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPREJ-01A-01D	DNA	EFO	SRS380072		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPREJ-01A-01D Catch-131198 library	PAIRED	GENOMIC	WXS	Hybrid Selection	164	65.9514509090909	Catch-131198	SRX210901	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-02	TARGET-30-PAPREJ-01A-01D Catch-131198 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0KW1ACXX120202.8.TTGTCTAT.C829.TARGET-30-PAPREJ-01A-01D.1.bam	SRR634822	@dbgap@:reads/SRP012002/SRS380072/SRX210901/SRR634822/SRR634822.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAPREJ.seg.txt	3
TARGET-30-PAPREJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPREJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPREJ-01A-01D	DNA	EFO	SRS380072		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPREJ-01A-01D Catch-131198 library	PAIRED	GENOMIC	WXS	Hybrid Selection	164	65.9514509090909	Catch-131198	SRX210901	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-02	TARGET-30-PAPREJ-01A-01D Catch-131198 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0KW1ACXX120202.8.TTGTCTAT.C829.TARGET-30-PAPREJ-01A-01D.1.bam	SRR634822	@dbgap@:reads/SRP012002/SRS380072/SRX210901/SRR634822/SRR634822.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAPREJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPREJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPREJ-10A-01D	DNA	EFO	SRS379636		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPREJ-10A-01D Catch-131108 library	PAIRED	GENOMIC	WXS	Hybrid Selection	162	64.8195222727273	Catch-131108	SRX209992	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PAPREJ-10A-01D Catch-131108 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DBMACXX120206.3.GCACACGA.C829.TARGET-30-PAPREJ-10A-01D.1.bam	SRR632063	@dbgap@:reads/SRP012002/SRS379636/SRX209992/SRR632063/SRR632063.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAPREJ.seg.txt	3
TARGET-30-PAPREJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPREJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPREJ-10A-01D	DNA	EFO	SRS379636		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPREJ-10A-01D Catch-131108 library	PAIRED	GENOMIC	WXS	Hybrid Selection	162	64.8195222727273	Catch-131108	SRX209992	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PAPREJ-10A-01D Catch-131108 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DBMACXX120206.3.GCACACGA.C829.TARGET-30-PAPREJ-10A-01D.1.bam	SRR632063	@dbgap@:reads/SRP012002/SRS379636/SRX209992/SRR632063/SRR632063.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAPRMJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPRMJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPRMJ-01A-01D	DNA	EFO	SRS380234		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPRMJ-01A-01D Catch-131138 library	PAIRED	GENOMIC	WXS	Hybrid Selection	163	64.1588436363636	Catch-131138	SRX211295	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PAPRMJ-01A-01D Catch-131138 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DBMACXX120206.6.GTAACATC.C829.TARGET-30-PAPRMJ-01A-01D.1.bam	SRR636447	@dbgap@:reads/SRP012002/SRS380234/SRX211295/SRR636447/SRR636447.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAPRMJ.seg.txt	3
TARGET-30-PAPRMJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPRMJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPRMJ-01A-01D	DNA	EFO	SRS380234		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPRMJ-01A-01D Catch-131138 library	PAIRED	GENOMIC	WXS	Hybrid Selection	163	64.1588436363636	Catch-131138	SRX211295	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PAPRMJ-01A-01D Catch-131138 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DBMACXX120206.6.GTAACATC.C829.TARGET-30-PAPRMJ-01A-01D.1.bam	SRR636447	@dbgap@:reads/SRP012002/SRS380234/SRX211295/SRR636447/SRR636447.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAPRMJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPRMJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPRMJ-10A-01D	DNA	EFO	SRS379878		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPRMJ-10A-01D Catch-131175 library	PAIRED	GENOMIC	WXS	Hybrid Selection	161	62.457635	Catch-131175	SRX210573	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-02	TARGET-30-PAPRMJ-10A-01D Catch-131175 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0KW1ACXX120202.2.CAATAGTC.C829.TARGET-30-PAPRMJ-10A-01D.1.bam	SRR632939	@dbgap@:reads/SRP012002/SRS379878/SRX210573/SRR632939/SRR632939.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAPRMJ.seg.txt	3
TARGET-30-PAPRMJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPRMJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPRMJ-10A-01D	DNA	EFO	SRS379878		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPRMJ-10A-01D Catch-131175 library	PAIRED	GENOMIC	WXS	Hybrid Selection	161	62.457635	Catch-131175	SRX210573	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-02	TARGET-30-PAPRMJ-10A-01D Catch-131175 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0KW1ACXX120202.2.CAATAGTC.C829.TARGET-30-PAPRMJ-10A-01D.1.bam	SRR632939	@dbgap@:reads/SRP012002/SRS379878/SRX210573/SRR632939/SRR632939.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAPRPR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPRPR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPRPR-01A-01D	DNA	EFO	SRS380078		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPRPR-01A-01D Catch-131176 library	PAIRED	GENOMIC	WXS	Hybrid Selection	162	63.8153068181818	Catch-131176	SRX210931	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-02	TARGET-30-PAPRPR-01A-01D Catch-131176 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0KW1ACXX120202.2.CGCTATGT.C829.TARGET-30-PAPRPR-01A-01D.1.bam	SRR635060	@dbgap@:reads/SRP012002/SRS380078/SRX210931/SRR635060/SRR635060.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAPRPR.seg.txt	3
TARGET-30-PAPRPR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPRPR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPRPR-01A-01D	DNA	EFO	SRS380078		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPRPR-01A-01D Catch-131176 library	PAIRED	GENOMIC	WXS	Hybrid Selection	162	63.8153068181818	Catch-131176	SRX210931	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-02	TARGET-30-PAPRPR-01A-01D Catch-131176 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0KW1ACXX120202.2.CGCTATGT.C829.TARGET-30-PAPRPR-01A-01D.1.bam	SRR635060	@dbgap@:reads/SRP012002/SRS380078/SRX210931/SRR635060/SRR635060.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAPRPR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPRPR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPRPR-10A-01D	DNA	EFO	SRS380039		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPRPR-10A-01D Catch-131195 library	PAIRED	GENOMIC	WXS	Hybrid Selection	169	67.0422563636364	Catch-131195	SRX210787	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PAPRPR-10A-01D Catch-131195 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DF6ACXX120206.4.TAATGAAC.C829.TARGET-30-PAPRPR-10A-01D.1.bam	SRR634133	@dbgap@:reads/SRP012002/SRS380039/SRX210787/SRR634133/SRR634133.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAPRPR.seg.txt	3
TARGET-30-PAPRPR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPRPR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPRPR-10A-01D	DNA	EFO	SRS380039		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPRPR-10A-01D Catch-131195 library	PAIRED	GENOMIC	WXS	Hybrid Selection	169	67.0422563636364	Catch-131195	SRX210787	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PAPRPR-10A-01D Catch-131195 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DF6ACXX120206.4.TAATGAAC.C829.TARGET-30-PAPRPR-10A-01D.1.bam	SRR634133	@dbgap@:reads/SRP012002/SRS380039/SRX210787/SRR634133/SRR634133.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAPRXW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPRXW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPRXW-01A-01D	DNA	EFO	SRS379562		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPRXW-01A-01D Catch-131182 library	PAIRED	GENOMIC	WXS	Hybrid Selection	162	64.6753522727273	Catch-131182	SRX209853	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PAPRXW-01A-01D Catch-131182 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DF6ACXX120206.6.TCCAGCAA.C829.TARGET-30-PAPRXW-01A-01D.1.bam	SRR631408	@dbgap@:reads/SRP012002/SRS379562/SRX209853/SRR631408/SRR631408.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAPRXW.seg.txt	3
TARGET-30-PAPRXW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPRXW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPRXW-01A-01D	DNA	EFO	SRS379562		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPRXW-01A-01D Catch-131182 library	PAIRED	GENOMIC	WXS	Hybrid Selection	162	64.6753522727273	Catch-131182	SRX209853	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PAPRXW-01A-01D Catch-131182 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DF6ACXX120206.6.TCCAGCAA.C829.TARGET-30-PAPRXW-01A-01D.1.bam	SRR631408	@dbgap@:reads/SRP012002/SRS379562/SRX209853/SRR631408/SRR631408.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAPRXW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPRXW-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPRXW-10A-01D	DNA	EFO	SRS379646		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPRXW-10A-01D Catch-131170 library	PAIRED	GENOMIC	WXS	Hybrid Selection	172	72.6359931818182	Catch-131170	SRX210042	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PAPRXW-10A-01D Catch-131170 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DBMACXX120206.2.CAGCAAGG.C829.TARGET-30-PAPRXW-10A-01D.1.bam	SRR632251	@dbgap@:reads/SRP012002/SRS379646/SRX210042/SRR632251/SRR632251.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAPRXW.seg.txt	3
TARGET-30-PAPRXW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPRXW-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPRXW-10A-01D	DNA	EFO	SRS379646		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPRXW-10A-01D Catch-131170 library	PAIRED	GENOMIC	WXS	Hybrid Selection	172	72.6359931818182	Catch-131170	SRX210042	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PAPRXW-10A-01D Catch-131170 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DBMACXX120206.2.CAGCAAGG.C829.TARGET-30-PAPRXW-10A-01D.1.bam	SRR632251	@dbgap@:reads/SRP012002/SRS379646/SRX210042/SRR632251/SRR632251.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAPSMC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPSMC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPSMC-01A-01W	DNA	EFO	SRS255468	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPSMC-01A-01W Solexa-24431 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	40.395	Solexa-24431	SRX092139	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-09	TARGET-30-PAPSMC-01A-01W Solexa-24431 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	61JVEAAXX100409.1.C310.6258_2144-T.3.bam	SRR331785	@dbgap@:reads/SRP012002/SRS255468/SRX092139/SRR331785/SRR331785.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAPSMC.seg.txt	3
TARGET-30-PAPSMC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPSMC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPSMC-01A-01W	DNA	EFO	SRS255468	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPSMC-01A-01W Solexa-24431 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	40.395	Solexa-24431	SRX092139	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-09	TARGET-30-PAPSMC-01A-01W Solexa-24431 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	61JVEAAXX100409.1.C310.6258_2144-T.3.bam	SRR331785	@dbgap@:reads/SRP012002/SRS255468/SRX092139/SRR331785/SRR331785.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAPSMC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPSMC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPSMC-10A-01W	DNA	EFO	SRS083544	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPSMC-10A-01W Solexa-24412 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	43.3413333333333	Solexa-24412	SRX091373	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-09	TARGET-30-PAPSMC-10A-01W Solexa-24412 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	61JVEAAXX100409.4.C310.6258_2144-N.2.bam	SRR330163	@dbgap@:reads/SRP012002/SRS083544/SRX091373/SRR330163/SRR330163.sra	2	GRCh37	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAPSMC.seg.txt	3
TARGET-30-PAPSMC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPSMC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPSMC-10A-01W	DNA	EFO	SRS083544	"Whole genome amplified (WGA) extract, 1st independent reaction"	broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPSMC-10A-01W Solexa-24412 library	PAIRED	GENOMIC	WXS	Hybrid Selection	250	43.3413333333333	Solexa-24412	SRX091373	"Whole Exome Sequencing"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-GAII:01	Broad	2010-04-09	TARGET-30-PAPSMC-10A-01W Solexa-24412 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline 1.6.1	broadinstitute.org:Protocol:WXS-ReadAlign:01	61JVEAAXX100409.4.C310.6258_2144-N.2.bam	SRR330163	@dbgap@:reads/SRP012002/SRS083544/SRX091373/SRR330163/SRR330163.sra	2	GRCh37	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAPTAN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTAN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTAN-01A-01D	DNA	EFO	SRS375091		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPTAN-01A-01D Catch-131165 library	PAIRED	GENOMIC	WXS	Hybrid Selection	161	71.5921845454545	Catch-131165	SRX210846	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PAPTAN-01A-01D Catch-131165 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DF6ACXX120206.1.AGGTGCGA.C829.TARGET-30-PAPTAN-01A-01D.1.bam	SRR634583	@dbgap@:reads/SRP012002/SRS375091/SRX210846/SRR634583/SRR634583.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAPTAN.seg.txt	3
TARGET-30-PAPTAN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTAN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTAN-01A-01D	DNA	EFO	SRS375091		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPTAN-01A-01D Catch-131165 library	PAIRED	GENOMIC	WXS	Hybrid Selection	161	71.5921845454545	Catch-131165	SRX210846	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PAPTAN-01A-01D Catch-131165 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DF6ACXX120206.1.AGGTGCGA.C829.TARGET-30-PAPTAN-01A-01D.1.bam	SRR634583	@dbgap@:reads/SRP012002/SRS375091/SRX210846/SRR634583/SRR634583.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAPTAN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTAN-14A	organism part	EFO	Bone Marrow	NCIt	"Bone Marrow Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTAN-14A-01D	DNA	EFO	SRS375090		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPTAN-14A-01D Catch-131113 library	PAIRED	GENOMIC	WXS	Hybrid Selection	164	66.9448481818182	Catch-131113	SRX210809	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PAPTAN-14A-01D Catch-131113 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DBMACXX120206.3.ACAGGTAT.C829.TARGET-30-PAPTAN-10A-01D.1.bam	SRR634230	@dbgap@:reads/SRP012002/SRS375090/SRX210809/SRR634230/SRR634230.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAPTAN.seg.txt	3
TARGET-30-PAPTAN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTAN-14A	organism part	EFO	Bone Marrow	NCIt	"Bone Marrow Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTAN-14A-01D	DNA	EFO	SRS375090		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPTAN-14A-01D Catch-131113 library	PAIRED	GENOMIC	WXS	Hybrid Selection	164	66.9448481818182	Catch-131113	SRX210809	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PAPTAN-14A-01D Catch-131113 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DBMACXX120206.3.ACAGGTAT.C829.TARGET-30-PAPTAN-10A-01D.1.bam	SRR634230	@dbgap@:reads/SRP012002/SRS375090/SRX210809/SRR634230/SRR634230.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAPTCR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTCR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTCR-01A-01D	DNA	EFO	SRS380217		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPTCR-01A-01D Catch-131136 library	PAIRED	GENOMIC	WXS	Hybrid Selection	170	105.381360454545	Catch-131136	SRX211239	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-02	TARGET-30-PAPTCR-01A-01D Catch-131136 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0KW1ACXX120202.8.CTGTAATC.C829.TARGET-30-PAPTCR-01A-01D.1.bam	SRR635783	@dbgap@:reads/SRP012002/SRS380217/SRX211239/SRR635783/SRR635783.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAPTCR.seg.txt	3
TARGET-30-PAPTCR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTCR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTCR-01A-01D	DNA	EFO	SRS380217		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPTCR-01A-01D Catch-131136 library	PAIRED	GENOMIC	WXS	Hybrid Selection	170	105.381360454545	Catch-131136	SRX211239	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-02	TARGET-30-PAPTCR-01A-01D Catch-131136 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0KW1ACXX120202.8.CTGTAATC.C829.TARGET-30-PAPTCR-01A-01D.1.bam	SRR635783	@dbgap@:reads/SRP012002/SRS380217/SRX211239/SRR635783/SRR635783.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAPTCR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTCR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTCR-10A-01D	DNA	EFO	SRS379641		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPTCR-10A-01D Catch-131115 library	PAIRED	GENOMIC	WXS	Hybrid Selection	169	73.3969022727273	Catch-131115	SRX210017	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PAPTCR-10A-01D Catch-131115 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DF6ACXX120206.2.AACAATGG.C829.TARGET-30-PAPTCR-10A-01D.1.bam	SRR632335	@dbgap@:reads/SRP012002/SRS379641/SRX210017/SRR632335/SRR632335.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAPTCR.seg.txt	3
TARGET-30-PAPTCR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTCR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTCR-10A-01D	DNA	EFO	SRS379641		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPTCR-10A-01D Catch-131115 library	PAIRED	GENOMIC	WXS	Hybrid Selection	169	73.3969022727273	Catch-131115	SRX210017	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PAPTCR-10A-01D Catch-131115 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DF6ACXX120206.2.AACAATGG.C829.TARGET-30-PAPTCR-10A-01D.1.bam	SRR632335	@dbgap@:reads/SRP012002/SRS379641/SRX210017/SRR632335/SRR632335.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAPTFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTFZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTFZ-01A-01D	DNA	EFO	SRS375904		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPTFZ-01A-01D Catch-131126 library	PAIRED	GENOMIC	WXS	Hybrid Selection	157	62.4982272727273	Catch-131126	SRX209884	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PAPTFZ-01A-01D Catch-131126 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DF6ACXX120206.7.CTAACTCG.C829.TARGET-30-PAPTFZ-01A-01D.1.bam	SRR631501	@dbgap@:reads/SRP012002/SRS375904/SRX209884/SRR631501/SRR631501.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAPTFZ.seg.txt	3
TARGET-30-PAPTFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTFZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTFZ-01A-01D	DNA	EFO	SRS375904		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPTFZ-01A-01D Catch-131126 library	PAIRED	GENOMIC	WXS	Hybrid Selection	157	62.4982272727273	Catch-131126	SRX209884	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PAPTFZ-01A-01D Catch-131126 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DF6ACXX120206.7.CTAACTCG.C829.TARGET-30-PAPTFZ-01A-01D.1.bam	SRR631501	@dbgap@:reads/SRP012002/SRS375904/SRX209884/SRR631501/SRR631501.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAPTFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTFZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTFZ-10A-01D	DNA	EFO	SRS375905		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPTFZ-10A-01D Catch-131161 library	PAIRED	GENOMIC	WXS	Hybrid Selection	159	63.2774704545454	Catch-131161	SRX209881	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PAPTFZ-10A-01D Catch-131161 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DF6ACXX120206.2.ACTAAGAC.C829.TARGET-30-PAPTFZ-10A-01D.1.bam	SRR631658	@dbgap@:reads/SRP012002/SRS375905/SRX209881/SRR631658/SRR631658.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAPTFZ.seg.txt	3
TARGET-30-PAPTFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTFZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTFZ-10A-01D	DNA	EFO	SRS375905		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPTFZ-10A-01D Catch-131161 library	PAIRED	GENOMIC	WXS	Hybrid Selection	159	63.2774704545454	Catch-131161	SRX209881	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PAPTFZ-10A-01D Catch-131161 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DF6ACXX120206.2.ACTAAGAC.C829.TARGET-30-PAPTFZ-10A-01D.1.bam	SRR631658	@dbgap@:reads/SRP012002/SRS375905/SRX209881/SRR631658/SRR631658.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAPTJB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTJB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTJB-01A-01D	DNA	EFO	SRS380190		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPTJB-01A-01D Catch-131163 library	PAIRED	GENOMIC	WXS	Hybrid Selection	157	64.2119	Catch-131163	SRX211142	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-02	TARGET-30-PAPTJB-01A-01D Catch-131163 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0KW1ACXX120202.7.ACAGTTGA.C829.TARGET-30-PAPTJB-01A-01D.1.bam	SRR635509	@dbgap@:reads/SRP012002/SRS380190/SRX211142/SRR635509/SRR635509.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAPTJB.seg.txt	3
TARGET-30-PAPTJB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTJB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTJB-01A-01D	DNA	EFO	SRS380190		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPTJB-01A-01D Catch-131163 library	PAIRED	GENOMIC	WXS	Hybrid Selection	157	64.2119	Catch-131163	SRX211142	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-02	TARGET-30-PAPTJB-01A-01D Catch-131163 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0KW1ACXX120202.7.ACAGTTGA.C829.TARGET-30-PAPTJB-01A-01D.1.bam	SRR635509	@dbgap@:reads/SRP012002/SRS380190/SRX211142/SRR635509/SRR635509.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAPTJB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTJB-14A	organism part	EFO	Bone Marrow	NCIt	"Bone Marrow Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTJB-14A-01D	DNA	EFO	SRS380019		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPTJB-14A-01D Catch-131116 library	PAIRED	GENOMIC	WXS	Hybrid Selection	155	62.7481754545455	Catch-131116	SRX210735	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PAPTJB-14A-01D Catch-131116 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DF6ACXX120206.3.ACTGTATC.C829.TARGET-30-PAPTJB-10A-01D.1.bam	SRR634006	@dbgap@:reads/SRP012002/SRS380019/SRX210735/SRR634006/SRR634006.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAPTJB.seg.txt	3
TARGET-30-PAPTJB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTJB-14A	organism part	EFO	Bone Marrow	NCIt	"Bone Marrow Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTJB-14A-01D	DNA	EFO	SRS380019		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPTJB-14A-01D Catch-131116 library	PAIRED	GENOMIC	WXS	Hybrid Selection	155	62.7481754545455	Catch-131116	SRX210735	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PAPTJB-14A-01D Catch-131116 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DF6ACXX120206.3.ACTGTATC.C829.TARGET-30-PAPTJB-10A-01D.1.bam	SRR634006	@dbgap@:reads/SRP012002/SRS380019/SRX210735/SRR634006/SRR634006.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAPTLA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLA-01A-01D	DNA	EFO	SRS379654		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPTLA-01A-01D Catch-131178 library	PAIRED	GENOMIC	WXS	Hybrid Selection	147	67.3377	Catch-131178	SRX210070	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-02	TARGET-30-PAPTLA-01A-01D Catch-131178 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0KW1ACXX120202.8.CCAGTTAG.C829.TARGET-30-PAPTLA-01A-01D.1.bam	SRR633213	@dbgap@:reads/SRP012002/SRS379654/SRX210070/SRR633213/SRR633213.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAPTLA.seg.txt	3
TARGET-30-PAPTLA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLA-01A-01D	DNA	EFO	SRS379654		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPTLA-01A-01D Catch-131178 library	PAIRED	GENOMIC	WXS	Hybrid Selection	147	67.3377	Catch-131178	SRX210070	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-02	TARGET-30-PAPTLA-01A-01D Catch-131178 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0KW1ACXX120202.8.CCAGTTAG.C829.TARGET-30-PAPTLA-01A-01D.1.bam	SRR633213	@dbgap@:reads/SRP012002/SRS379654/SRX210070/SRR633213/SRR633213.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAPTLA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLA-10A-01D	DNA	EFO	SRS380079		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPTLA-10A-01D Catch-131127 library	PAIRED	GENOMIC	WXS	Hybrid Selection	164	62.7245786363636	Catch-131127	SRX210933	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PAPTLA-10A-01D Catch-131127 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DF6ACXX120206.3.ATTCCTCT.C829.TARGET-30-PAPTLA-10A-01D.1.bam	SRR634984	@dbgap@:reads/SRP012002/SRS380079/SRX210933/SRR634984/SRR634984.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAPTLA.seg.txt	3
TARGET-30-PAPTLA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLA-10A-01D	DNA	EFO	SRS380079		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPTLA-10A-01D Catch-131127 library	PAIRED	GENOMIC	WXS	Hybrid Selection	164	62.7245786363636	Catch-131127	SRX210933	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PAPTLA-10A-01D Catch-131127 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DF6ACXX120206.3.ATTCCTCT.C829.TARGET-30-PAPTLA-10A-01D.1.bam	SRR634984	@dbgap@:reads/SRP012002/SRS380079/SRX210933/SRR634984/SRR634984.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAPTLV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLV-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLV-01A-01D	DNA	EFO	SRS375963		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPTLV-01A-01D Catch-131125 library	PAIRED	GENOMIC	WXS	Hybrid Selection	165	66.4818068181818	Catch-131125	SRX211199	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-02	TARGET-30-PAPTLV-01A-01D Catch-131125 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0KW1ACXX120202.4.CCAACATT.C829.TARGET-30-PAPTLV-01A-01D.1.bam	SRR636359	@dbgap@:reads/SRP012002/SRS375963/SRX211199/SRR636359/SRR636359.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAPTLV.seg.txt	3
TARGET-30-PAPTLV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLV-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLV-01A-01D	DNA	EFO	SRS375963		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPTLV-01A-01D Catch-131125 library	PAIRED	GENOMIC	WXS	Hybrid Selection	165	66.4818068181818	Catch-131125	SRX211199	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-02	TARGET-30-PAPTLV-01A-01D Catch-131125 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0KW1ACXX120202.4.CCAACATT.C829.TARGET-30-PAPTLV-01A-01D.1.bam	SRR636359	@dbgap@:reads/SRP012002/SRS375963/SRX211199/SRR636359/SRR636359.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAPTLV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLV-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLV-10A-01D	DNA	EFO	SRS375962		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPTLV-10A-01D Catch-131191 library	PAIRED	GENOMIC	WXS	Hybrid Selection	159	61.3642154545455	Catch-131191	SRX210273	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-02	TARGET-30-PAPTLV-10A-01D Catch-131191 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0KW1ACXX120202.8.AAGGATGT.C829.TARGET-30-PAPTLV-10A-01D.1.bam	SRR632617	@dbgap@:reads/SRP012002/SRS375962/SRX210273/SRR632617/SRR632617.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAPTLV.seg.txt	3
TARGET-30-PAPTLV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPTLV-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPTLV-10A-01D	DNA	EFO	SRS375962		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPTLV-10A-01D Catch-131191 library	PAIRED	GENOMIC	WXS	Hybrid Selection	159	61.3642154545455	Catch-131191	SRX210273	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-02	TARGET-30-PAPTLV-10A-01D Catch-131191 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0KW1ACXX120202.8.AAGGATGT.C829.TARGET-30-PAPTLV-10A-01D.1.bam	SRR632617	@dbgap@:reads/SRP012002/SRS375962/SRX210273/SRR632617/SRR632617.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAPUJU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUJU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUJU-01A-01D	DNA	EFO	SRS380198		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPUJU-01A-01D Catch-131156 library	PAIRED	GENOMIC	WXS	Hybrid Selection	163	64.4478445454545	Catch-131156	SRX211171	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-02	TARGET-30-PAPUJU-01A-01D Catch-131156 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0KW1ACXX120202.7.TGTCGGAT.C829.TARGET-30-PAPUJU-01A-01D.1.bam	SRR645939	@dbgap@:reads/SRP012002/SRS380198/SRX211171/SRR645939/SRR645939.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAPUJU.seg.txt	3
TARGET-30-PAPUJU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUJU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUJU-01A-01D	DNA	EFO	SRS380198		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPUJU-01A-01D Catch-131156 library	PAIRED	GENOMIC	WXS	Hybrid Selection	163	64.4478445454545	Catch-131156	SRX211171	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-02	TARGET-30-PAPUJU-01A-01D Catch-131156 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0KW1ACXX120202.7.TGTCGGAT.C829.TARGET-30-PAPUJU-01A-01D.1.bam	SRR645939	@dbgap@:reads/SRP012002/SRS380198/SRX211171/SRR645939/SRR645939.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAPUJU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUJU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUJU-10A-01D	DNA	EFO	SRS380175		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPUJU-10A-01D Catch-131107 library	PAIRED	GENOMIC	WXS	Hybrid Selection	166	63.9971918181818	Catch-131107	SRX211083	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PAPUJU-10A-01D Catch-131107 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DBMACXX120206.6.ACCAACTG.C829.TARGET-30-PAPUJU-10A-01D.1.bam	SRR635667	@dbgap@:reads/SRP012002/SRS380175/SRX211083/SRR635667/SRR635667.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAPUJU.seg.txt	3
TARGET-30-PAPUJU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUJU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUJU-10A-01D	DNA	EFO	SRS380175		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPUJU-10A-01D Catch-131107 library	PAIRED	GENOMIC	WXS	Hybrid Selection	166	63.9971918181818	Catch-131107	SRX211083	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PAPUJU-10A-01D Catch-131107 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DBMACXX120206.6.ACCAACTG.C829.TARGET-30-PAPUJU-10A-01D.1.bam	SRR635667	@dbgap@:reads/SRP012002/SRS380175/SRX211083/SRR635667/SRR635667.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAPUWY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUWY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUWY-01A-01D	DNA	EFO	SRS375433		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPUWY-01A-01D Catch-131133 library	PAIRED	GENOMIC	WXS	Hybrid Selection	163	64.8760463636364	Catch-131133	SRX210561	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PAPUWY-01A-01D Catch-131133 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DF6ACXX120206.2.GACAGTAA.C829.TARGET-30-PAPUWY-01A-01D.1.bam	SRR633424	@dbgap@:reads/SRP012002/SRS375433/SRX210561/SRR633424/SRR633424.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAPUWY.seg.txt	3
TARGET-30-PAPUWY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUWY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUWY-01A-01D	DNA	EFO	SRS375433		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPUWY-01A-01D Catch-131133 library	PAIRED	GENOMIC	WXS	Hybrid Selection	163	64.8760463636364	Catch-131133	SRX210561	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PAPUWY-01A-01D Catch-131133 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DF6ACXX120206.2.GACAGTAA.C829.TARGET-30-PAPUWY-01A-01D.1.bam	SRR633424	@dbgap@:reads/SRP012002/SRS375433/SRX210561/SRR633424/SRR633424.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAPUWY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUWY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUWY-10A-01D	DNA	EFO	SRS375432		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPUWY-10A-01D Catch-131200 library	PAIRED	GENOMIC	WXS	Hybrid Selection	160	62.89458	Catch-131200	SRX210939	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PAPUWY-10A-01D Catch-131200 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DF6ACXX120206.5.TGTAACTC.C829.TARGET-30-PAPUWY-10A-01D.1.bam	SRR634938	@dbgap@:reads/SRP012002/SRS375432/SRX210939/SRR634938/SRR634938.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAPUWY.seg.txt	3
TARGET-30-PAPUWY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPUWY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPUWY-10A-01D	DNA	EFO	SRS375432		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPUWY-10A-01D Catch-131200 library	PAIRED	GENOMIC	WXS	Hybrid Selection	160	62.89458	Catch-131200	SRX210939	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PAPUWY-10A-01D Catch-131200 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DF6ACXX120206.5.TGTAACTC.C829.TARGET-30-PAPUWY-10A-01D.1.bam	SRR634938	@dbgap@:reads/SRP012002/SRS375432/SRX210939/SRR634938/SRR634938.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAPVFD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVFD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVFD-01A-01D	DNA	EFO	SRS379632		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPVFD-01A-01D Catch-131193 library	PAIRED	GENOMIC	WXS	Hybrid Selection	165	67.3845572727273	Catch-131193	SRX209977	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-02	TARGET-30-PAPVFD-01A-01D Catch-131193 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0KW1ACXX120202.8.ATTCTAGG.C829.TARGET-30-PAPVFD-01A-01D.1.bam	SRR632005	@dbgap@:reads/SRP012002/SRS379632/SRX209977/SRR632005/SRR632005.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAPVFD.seg.txt	3
TARGET-30-PAPVFD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVFD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVFD-01A-01D	DNA	EFO	SRS379632		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPVFD-01A-01D Catch-131193 library	PAIRED	GENOMIC	WXS	Hybrid Selection	165	67.3845572727273	Catch-131193	SRX209977	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-02	TARGET-30-PAPVFD-01A-01D Catch-131193 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0KW1ACXX120202.8.ATTCTAGG.C829.TARGET-30-PAPVFD-01A-01D.1.bam	SRR632005	@dbgap@:reads/SRP012002/SRS379632/SRX209977/SRR632005/SRR632005.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAPVFD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVFD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVFD-10A-01D	DNA	EFO	SRS380031		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPVFD-10A-01D Catch-131146 library	PAIRED	GENOMIC	WXS	Hybrid Selection	171	68.1551386363636	Catch-131146	SRX210757	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PAPVFD-10A-01D Catch-131146 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DF6ACXX120206.8.TTGAATAG.C829.TARGET-30-PAPVFD-10A-01D.1.bam	SRR633984	@dbgap@:reads/SRP012002/SRS380031/SRX210757/SRR633984/SRR633984.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAPVFD.seg.txt	3
TARGET-30-PAPVFD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVFD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVFD-10A-01D	DNA	EFO	SRS380031		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPVFD-10A-01D Catch-131146 library	PAIRED	GENOMIC	WXS	Hybrid Selection	171	68.1551386363636	Catch-131146	SRX210757	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PAPVFD-10A-01D Catch-131146 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DF6ACXX120206.8.TTGAATAG.C829.TARGET-30-PAPVFD-10A-01D.1.bam	SRR633984	@dbgap@:reads/SRP012002/SRS380031/SRX210757/SRR633984/SRR633984.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAPVRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVRN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVRN-01A-01D	DNA	EFO	SRS375961		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPVRN-01A-01D Catch-131160 library	PAIRED	GENOMIC	WXS	Hybrid Selection	169	71.8926772727273	Catch-131160	SRX210285	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PAPVRN-01A-01D Catch-131160 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DF6ACXX120206.8.AATGTTCT.C829.TARGET-30-PAPVRN-01A-01D.1.bam	SRR632657	@dbgap@:reads/SRP012002/SRS375961/SRX210285/SRR632657/SRR632657.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAPVRN.seg.txt	3
TARGET-30-PAPVRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVRN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVRN-01A-01D	DNA	EFO	SRS375961		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPVRN-01A-01D Catch-131160 library	PAIRED	GENOMIC	WXS	Hybrid Selection	169	71.8926772727273	Catch-131160	SRX210285	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PAPVRN-01A-01D Catch-131160 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DF6ACXX120206.8.AATGTTCT.C829.TARGET-30-PAPVRN-01A-01D.1.bam	SRR632657	@dbgap@:reads/SRP012002/SRS375961/SRX210285/SRR632657/SRR632657.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAPVRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVRN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVRN-10A-01D	DNA	EFO	SRS375960		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPVRN-10A-01D Catch-131131 library	PAIRED	GENOMIC	WXS	Hybrid Selection	164	65.3285959090909	Catch-131131	SRX210033	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PAPVRN-10A-01D Catch-131131 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DBMACXX120206.7.GTATAACA.C829.TARGET-30-PAPVRN-10A-01D.1.bam	SRR632229	@dbgap@:reads/SRP012002/SRS375960/SRX210033/SRR632229/SRR632229.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAPVRN.seg.txt	3
TARGET-30-PAPVRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVRN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVRN-10A-01D	DNA	EFO	SRS375960		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPVRN-10A-01D Catch-131131 library	PAIRED	GENOMIC	WXS	Hybrid Selection	164	65.3285959090909	Catch-131131	SRX210033	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PAPVRN-10A-01D Catch-131131 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DBMACXX120206.7.GTATAACA.C829.TARGET-30-PAPVRN-10A-01D.1.bam	SRR632229	@dbgap@:reads/SRP012002/SRS375960/SRX210033/SRR632229/SRR632229.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAPVXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVXS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVXS-01A-01D	DNA	EFO	SRS375089		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPVXS-01A-01D Catch-131179 library	PAIRED	GENOMIC	WXS	Hybrid Selection	164	68.3926281818182	Catch-131179	SRX209966	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PAPVXS-01A-01D Catch-131179 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DBMACXX120206.1.TCGGAATG.C829.TARGET-30-PAPVXS-01A-01D.1.bam	SRR633000	@dbgap@:reads/SRP012002/SRS375089/SRX209966/SRR633000/SRR633000.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAPVXS.seg.txt	3
TARGET-30-PAPVXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVXS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVXS-01A-01D	DNA	EFO	SRS375089		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPVXS-01A-01D Catch-131179 library	PAIRED	GENOMIC	WXS	Hybrid Selection	164	68.3926281818182	Catch-131179	SRX209966	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PAPVXS-01A-01D Catch-131179 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DBMACXX120206.1.TCGGAATG.C829.TARGET-30-PAPVXS-01A-01D.1.bam	SRR633000	@dbgap@:reads/SRP012002/SRS375089/SRX209966/SRR633000/SRR633000.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAPVXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVXS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVXS-10A-01D	DNA	EFO	SRS375088		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPVXS-10A-01D Catch-131134 library	PAIRED	GENOMIC	WXS	Hybrid Selection	164	65.746505	Catch-131134	SRX210765	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PAPVXS-10A-01D Catch-131134 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DBMACXX120206.2.TTACGCAC.C829.TARGET-30-PAPVXS-10A-01D.1.bam	SRR634309	@dbgap@:reads/SRP012002/SRS375088/SRX210765/SRR634309/SRR634309.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAPVXS.seg.txt	3
TARGET-30-PAPVXS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPVXS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPVXS-10A-01D	DNA	EFO	SRS375088		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPVXS-10A-01D Catch-131134 library	PAIRED	GENOMIC	WXS	Hybrid Selection	164	65.746505	Catch-131134	SRX210765	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PAPVXS-10A-01D Catch-131134 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DBMACXX120206.2.TTACGCAC.C829.TARGET-30-PAPVXS-10A-01D.1.bam	SRR634309	@dbgap@:reads/SRP012002/SRS375088/SRX210765/SRR634309/SRR634309.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAPWFY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPWFY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPWFY-01A-01D	DNA	EFO	SRS379648		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPWFY-01A-01D Catch-131172 library	PAIRED	GENOMIC	WXS	Hybrid Selection	145	82.5297709090909	Catch-131172	SRX210050	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PAPWFY-01A-01D Catch-131172 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DBMACXX120206.1.CAGCGGTA.C829.TARGET-30-PAPWFY-01A-01D.1.bam	SRR632313	@dbgap@:reads/SRP012002/SRS379648/SRX210050/SRR632313/SRR632313.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAPWFY.seg.txt	3
TARGET-30-PAPWFY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPWFY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPWFY-01A-01D	DNA	EFO	SRS379648		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPWFY-01A-01D Catch-131172 library	PAIRED	GENOMIC	WXS	Hybrid Selection	145	82.5297709090909	Catch-131172	SRX210050	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PAPWFY-01A-01D Catch-131172 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DBMACXX120206.1.CAGCGGTA.C829.TARGET-30-PAPWFY-01A-01D.1.bam	SRR632313	@dbgap@:reads/SRP012002/SRS379648/SRX210050/SRR632313/SRR632313.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAPWFY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPWFY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPWFY-10A-01D	DNA	EFO	SRS380220		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPWFY-10A-01D Catch-131132 library	PAIRED	GENOMIC	WXS	Hybrid Selection	167	68.8902022727273	Catch-131132	SRX211248	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PAPWFY-10A-01D Catch-131132 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DBMACXX120206.1.CATAGCGA.C829.TARGET-30-PAPWFY-10A-01D.1.bam	SRR635868	@dbgap@:reads/SRP012002/SRS380220/SRX211248/SRR635868/SRR635868.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAPWFY.seg.txt	3
TARGET-30-PAPWFY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPWFY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPWFY-10A-01D	DNA	EFO	SRS380220		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPWFY-10A-01D Catch-131132 library	PAIRED	GENOMIC	WXS	Hybrid Selection	167	68.8902022727273	Catch-131132	SRX211248	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PAPWFY-10A-01D Catch-131132 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DBMACXX120206.1.CATAGCGA.C829.TARGET-30-PAPWFY-10A-01D.1.bam	SRR635868	@dbgap@:reads/SRP012002/SRS380220/SRX211248/SRR635868/SRR635868.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAPYNZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPYNZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPYNZ-01A-01D	DNA	EFO	SRS380171		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPYNZ-01A-01D Catch-131192 library	PAIRED	GENOMIC	WXS	Hybrid Selection	146	60.4943763636364	Catch-131192	SRX211067	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PAPYNZ-01A-01D Catch-131192 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DF6ACXX120206.6.TACTTAGC.C829.TARGET-30-PAPYNZ-01A-01D.1.bam	SRR635761	@dbgap@:reads/SRP012002/SRS380171/SRX211067/SRR635761/SRR635761.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAPYNZ.seg.txt	3
TARGET-30-PAPYNZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPYNZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPYNZ-01A-01D	DNA	EFO	SRS380171		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPYNZ-01A-01D Catch-131192 library	PAIRED	GENOMIC	WXS	Hybrid Selection	146	60.4943763636364	Catch-131192	SRX211067	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PAPYNZ-01A-01D Catch-131192 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DF6ACXX120206.6.TACTTAGC.C829.TARGET-30-PAPYNZ-01A-01D.1.bam	SRR635761	@dbgap@:reads/SRP012002/SRS380171/SRX211067/SRR635761/SRR635761.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAPYNZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPYNZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPYNZ-10A-01D	DNA	EFO	SRS380235		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPYNZ-10A-01D Catch-131155 library	PAIRED	GENOMIC	WXS	Hybrid Selection	166	69.3434495454545	Catch-131155	SRX211299	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PAPYNZ-10A-01D Catch-131155 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DF6ACXX120206.5.AACTTGAC.C829.TARGET-30-PAPYNZ-10A-01D.1.bam	SRR636469	@dbgap@:reads/SRP012002/SRS380235/SRX211299/SRR636469/SRR636469.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAPYNZ.seg.txt	3
TARGET-30-PAPYNZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPYNZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPYNZ-10A-01D	DNA	EFO	SRS380235		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPYNZ-10A-01D Catch-131155 library	PAIRED	GENOMIC	WXS	Hybrid Selection	166	69.3434495454545	Catch-131155	SRX211299	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PAPYNZ-10A-01D Catch-131155 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DF6ACXX120206.5.AACTTGAC.C829.TARGET-30-PAPYNZ-10A-01D.1.bam	SRR636469	@dbgap@:reads/SRP012002/SRS380235/SRX211299/SRR636469/SRR636469.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAPZFW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZFW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZFW-01A-01D	DNA	EFO	SRS380074		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPZFW-01A-01D Catch-131184 library	PAIRED	GENOMIC	WXS	Hybrid Selection	165	67.4493927272727	Catch-131184	SRX210912	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-02	TARGET-30-PAPZFW-01A-01D Catch-131184 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0KW1ACXX120202.7.GACCAGGA.C829.TARGET-30-PAPZFW-01A-01D.1.bam	SRR634799	@dbgap@:reads/SRP012002/SRS380074/SRX210912/SRR634799/SRR634799.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAPZFW.seg.txt	3
TARGET-30-PAPZFW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZFW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZFW-01A-01D	DNA	EFO	SRS380074		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPZFW-01A-01D Catch-131184 library	PAIRED	GENOMIC	WXS	Hybrid Selection	165	67.4493927272727	Catch-131184	SRX210912	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-02	TARGET-30-PAPZFW-01A-01D Catch-131184 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0KW1ACXX120202.7.GACCAGGA.C829.TARGET-30-PAPZFW-01A-01D.1.bam	SRR634799	@dbgap@:reads/SRP012002/SRS380074/SRX210912/SRR634799/SRR634799.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAPZFW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZFW-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZFW-10A-01D	DNA	EFO	SRS380056		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPZFW-10A-01D Catch-131197 library	PAIRED	GENOMIC	WXS	Hybrid Selection	164	63.2752504545455	Catch-131197	SRX210866	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PAPZFW-10A-01D Catch-131197 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DF6ACXX120206.5.TGCTGCTG.C829.TARGET-30-PAPZFW-10A-01D.1.bam	SRR634478	@dbgap@:reads/SRP012002/SRS380056/SRX210866/SRR634478/SRR634478.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAPZFW.seg.txt	3
TARGET-30-PAPZFW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZFW-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZFW-10A-01D	DNA	EFO	SRS380056		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPZFW-10A-01D Catch-131197 library	PAIRED	GENOMIC	WXS	Hybrid Selection	164	63.2752504545455	Catch-131197	SRX210866	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PAPZFW-10A-01D Catch-131197 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DF6ACXX120206.5.TGCTGCTG.C829.TARGET-30-PAPZFW-10A-01D.1.bam	SRR634478	@dbgap@:reads/SRP012002/SRS380056/SRX210866/SRR634478/SRR634478.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAPZYZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZYZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZYZ-01A-01D	DNA	EFO	SRS375174		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPZYZ-01A-01D Catch-131152 library	PAIRED	GENOMIC	WXS	Hybrid Selection	158	62.3402909090909	Catch-131152	SRX210885	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PAPZYZ-01A-01D Catch-131152 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DF6ACXX120206.7.TGCAAGTA.C829.TARGET-30-PAPZYZ-01A-01D.1.bam	SRR634718	@dbgap@:reads/SRP012002/SRS375174/SRX210885/SRR634718/SRR634718.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAPZYZ.seg.txt	3
TARGET-30-PAPZYZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZYZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZYZ-01A-01D	DNA	EFO	SRS375174		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPZYZ-01A-01D Catch-131152 library	PAIRED	GENOMIC	WXS	Hybrid Selection	158	62.3402909090909	Catch-131152	SRX210885	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PAPZYZ-01A-01D Catch-131152 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DF6ACXX120206.7.TGCAAGTA.C829.TARGET-30-PAPZYZ-01A-01D.1.bam	SRR634718	@dbgap@:reads/SRP012002/SRS375174/SRX210885/SRR634718/SRR634718.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAPZYZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZYZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZYZ-10A-01D	DNA	EFO	SRS375173		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPZYZ-10A-01D Catch-131164 library	PAIRED	GENOMIC	WXS	Hybrid Selection	161	65.2059195454545	Catch-131164	SRX211152	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-02	TARGET-30-PAPZYZ-10A-01D Catch-131164 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0KW1ACXX120202.4.AGCATGGA.C829.TARGET-30-PAPZYZ-10A-01D.1.bam	SRR635407	@dbgap@:reads/SRP012002/SRS375173/SRX211152/SRR635407/SRR635407.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAPZYZ.seg.txt	3
TARGET-30-PAPZYZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAPZYZ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAPZYZ-10A-01D	DNA	EFO	SRS375173		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAPZYZ-10A-01D Catch-131164 library	PAIRED	GENOMIC	WXS	Hybrid Selection	161	65.2059195454545	Catch-131164	SRX211152	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-02	TARGET-30-PAPZYZ-10A-01D Catch-131164 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0KW1ACXX120202.4.AGCATGGA.C829.TARGET-30-PAPZYZ-10A-01D.1.bam	SRR635407	@dbgap@:reads/SRP012002/SRS375173/SRX211152/SRR635407/SRR635407.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARABJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARABJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARABJ-01A-01D	DNA	EFO	SRS380848		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARABJ-01A-01D Catch-131022 library	PAIRED	GENOMIC	WXS	Hybrid Selection	161	66.54155	Catch-131022	SRX211802	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-25	TARGET-30-PARABJ-01A-01D Catch-131022 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0JTGACXX120125.8.TTGAGCCT.C829.TARGET-30-PARABJ-01A-01D.1.bam	SRR637068	@dbgap@:reads/SRP012002/SRS380848/SRX211802/SRR637068/SRR637068.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARABJ.seg.txt	3
TARGET-30-PARABJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARABJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARABJ-01A-01D	DNA	EFO	SRS380848		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARABJ-01A-01D Catch-131022 library	PAIRED	GENOMIC	WXS	Hybrid Selection	161	66.54155	Catch-131022	SRX211802	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-25	TARGET-30-PARABJ-01A-01D Catch-131022 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0JTGACXX120125.8.TTGAGCCT.C829.TARGET-30-PARABJ-01A-01D.1.bam	SRR637068	@dbgap@:reads/SRP012002/SRS380848/SRX211802/SRR637068/SRR637068.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARABJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARABJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARABJ-10A-01D	DNA	EFO	SRS380852		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARABJ-10A-01D Catch-131002 library	PAIRED	GENOMIC	WXS	Hybrid Selection	149	55.4678933333333	Catch-131002	SRX211813	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARABJ-10A-01D Catch-131002 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0703ACXX120123.8.CAGCAAGG.C829.TARGET-30-PARABJ-10A-01D.1.bam	SRR637122	@dbgap@:reads/SRP012002/SRS380852/SRX211813/SRR637122/SRR637122.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARABJ.seg.txt	3
TARGET-30-PARABJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARABJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARABJ-10A-01D	DNA	EFO	SRS380852		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARABJ-10A-01D Catch-131002 library	PAIRED	GENOMIC	WXS	Hybrid Selection	149	55.4678933333333	Catch-131002	SRX211813	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARABJ-10A-01D Catch-131002 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0703ACXX120123.8.CAGCAAGG.C829.TARGET-30-PARABJ-10A-01D.1.bam	SRR637122	@dbgap@:reads/SRP012002/SRS380852/SRX211813/SRR637122/SRR637122.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARACR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACR-01A-01D	DNA	EFO	SRS379652		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARACR-01A-01D Catch-131157 library	PAIRED	GENOMIC	WXS	Hybrid Selection	165	68.8828909090909	Catch-131157	SRX210063	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PARACR-01A-01D Catch-131157 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DF6ACXX120206.6.TCGCCTTG.C829.TARGET-30-PARACR-01A-01D.1.bam	SRR633094	@dbgap@:reads/SRP012002/SRS379652/SRX210063/SRR633094/SRR633094.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARACR.seg.txt	3
TARGET-30-PARACR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACR-01A-01D	DNA	EFO	SRS379652		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARACR-01A-01D Catch-131157 library	PAIRED	GENOMIC	WXS	Hybrid Selection	165	68.8828909090909	Catch-131157	SRX210063	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PARACR-01A-01D Catch-131157 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DF6ACXX120206.6.TCGCCTTG.C829.TARGET-30-PARACR-01A-01D.1.bam	SRR633094	@dbgap@:reads/SRP012002/SRS379652/SRX210063/SRR633094/SRR633094.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARACR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACR-10A-01D	DNA	EFO	SRS380176		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARACR-10A-01D Catch-131111 library	PAIRED	GENOMIC	WXS	Hybrid Selection	175	74.6312145454545	Catch-131111	SRX211084	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-02	TARGET-30-PARACR-10A-01D Catch-131111 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0KW1ACXX120202.8.TCCTTGGT.C829.TARGET-30-PARACR-10A-01D.1.bam	SRR635645	@dbgap@:reads/SRP012002/SRS380176/SRX211084/SRR635645/SRR635645.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARACR.seg.txt	3
TARGET-30-PARACR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACR-10A-01D	DNA	EFO	SRS380176		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARACR-10A-01D Catch-131111 library	PAIRED	GENOMIC	WXS	Hybrid Selection	175	74.6312145454545	Catch-131111	SRX211084	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-02	TARGET-30-PARACR-10A-01D Catch-131111 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0KW1ACXX120202.8.TCCTTGGT.C829.TARGET-30-PARACR-10A-01D.1.bam	SRR635645	@dbgap@:reads/SRP012002/SRS380176/SRX211084/SRR635645/SRR635645.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARACS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACS-01A-01D	DNA	EFO	SRS375332		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARACS-01A-01D Catch-131110 library	PAIRED	GENOMIC	WXS	Hybrid Selection	168	66.8359104545455	Catch-131110	SRX210551	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PARACS-01A-01D Catch-131110 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DF6ACXX120206.2.CGTTACCA.C829.TARGET-30-PARACS-01A-01D.1.bam	SRR633492	@dbgap@:reads/SRP012002/SRS375332/SRX210551/SRR633492/SRR633492.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARACS.seg.txt	3
TARGET-30-PARACS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACS-01A-01D	DNA	EFO	SRS375332		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARACS-01A-01D Catch-131110 library	PAIRED	GENOMIC	WXS	Hybrid Selection	168	66.8359104545455	Catch-131110	SRX210551	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PARACS-01A-01D Catch-131110 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DF6ACXX120206.2.CGTTACCA.C829.TARGET-30-PARACS-01A-01D.1.bam	SRR633492	@dbgap@:reads/SRP012002/SRS375332/SRX210551/SRR633492/SRR633492.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARACS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACS-10A-01D	DNA	EFO	SRS375331		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARACS-10A-01D Catch-131129 library	PAIRED	GENOMIC	WXS	Hybrid Selection	156	61.2375795454545	Catch-131129	SRX210008	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PARACS-10A-01D Catch-131129 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DF6ACXX120206.6.CTGCGGAT.C829.TARGET-30-PARACS-10A-01D.1.bam	SRR632207	@dbgap@:reads/SRP012002/SRS375331/SRX210008/SRR632207/SRR632207.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARACS.seg.txt	3
TARGET-30-PARACS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARACS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARACS-10A-01D	DNA	EFO	SRS375331		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARACS-10A-01D Catch-131129 library	PAIRED	GENOMIC	WXS	Hybrid Selection	156	61.2375795454545	Catch-131129	SRX210008	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PARACS-10A-01D Catch-131129 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DF6ACXX120206.6.CTGCGGAT.C829.TARGET-30-PARACS-10A-01D.1.bam	SRR632207	@dbgap@:reads/SRP012002/SRS375331/SRX210008/SRR632207/SRR632207.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARAMT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARAMT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARAMT-01A-01D	DNA	EFO	SRS375324		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARAMT-01A-01D Catch-131190 library	PAIRED	GENOMIC	WXS	Hybrid Selection	159	65.4002340909091	Catch-131190	SRX211115	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PARAMT-01A-01D Catch-131190 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DBMACXX120206.7.TTGAGCCT.C829.TARGET-30-PARAMT-01A-01D.1.bam	SRR635519	@dbgap@:reads/SRP012002/SRS375324/SRX211115/SRR635519/SRR635519.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARAMT.seg.txt	3
TARGET-30-PARAMT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARAMT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARAMT-01A-01D	DNA	EFO	SRS375324		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARAMT-01A-01D Catch-131190 library	PAIRED	GENOMIC	WXS	Hybrid Selection	159	65.4002340909091	Catch-131190	SRX211115	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PARAMT-01A-01D Catch-131190 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DBMACXX120206.7.TTGAGCCT.C829.TARGET-30-PARAMT-01A-01D.1.bam	SRR635519	@dbgap@:reads/SRP012002/SRS375324/SRX211115/SRR635519/SRR635519.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARAMT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARAMT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARAMT-10A-01D	DNA	EFO	SRS375323		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARAMT-10A-01D Catch-131167 library	PAIRED	GENOMIC	WXS	Hybrid Selection	166	67.1504095454545	Catch-131167	SRX211190	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PARAMT-10A-01D Catch-131167 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DF6ACXX120206.3.CACATCCT.C829.TARGET-30-PARAMT-10A-01D.1.bam	SRR635823	@dbgap@:reads/SRP012002/SRS375323/SRX211190/SRR635823/SRR635823.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARAMT.seg.txt	3
TARGET-30-PARAMT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARAMT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARAMT-10A-01D	DNA	EFO	SRS375323		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARAMT-10A-01D Catch-131167 library	PAIRED	GENOMIC	WXS	Hybrid Selection	166	67.1504095454545	Catch-131167	SRX211190	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PARAMT-10A-01D Catch-131167 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DF6ACXX120206.3.CACATCCT.C829.TARGET-30-PARAMT-10A-01D.1.bam	SRR635823	@dbgap@:reads/SRP012002/SRS375323/SRX211190/SRR635823/SRR635823.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARASL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARASL-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARASL-01A-01D	DNA	EFO	SRS380211		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARASL-01A-01D Catch-131144 library	PAIRED	GENOMIC	WXS	Hybrid Selection	161	61.8074740909091	Catch-131144	SRX211220	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PARASL-01A-01D Catch-131144 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DF6ACXX120206.4.CAGGAGCC.C829.TARGET-30-PARASL-01A-01D.1.bam	SRR645907	@dbgap@:reads/SRP012002/SRS380211/SRX211220/SRR645907/SRR645907.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARASL.seg.txt	3
TARGET-30-PARASL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARASL-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARASL-01A-01D	DNA	EFO	SRS380211		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARASL-01A-01D Catch-131144 library	PAIRED	GENOMIC	WXS	Hybrid Selection	161	61.8074740909091	Catch-131144	SRX211220	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PARASL-01A-01D Catch-131144 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DF6ACXX120206.4.CAGGAGCC.C829.TARGET-30-PARASL-01A-01D.1.bam	SRR645907	@dbgap@:reads/SRP012002/SRS380211/SRX211220/SRR645907/SRR645907.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARASL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARASL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARASL-10A-01D	DNA	EFO	SRS379640		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARASL-10A-01D Catch-131199 library	PAIRED	GENOMIC	WXS	Hybrid Selection	165	65.6852022727273	Catch-131199	SRX210015	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-02	TARGET-30-PARASL-10A-01D Catch-131199 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0KW1ACXX120202.7.TCTGCAAG.C829.TARGET-30-PARASL-10A-01D.1.bam	SRR633116	@dbgap@:reads/SRP012002/SRS379640/SRX210015/SRR633116/SRR633116.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARASL.seg.txt	3
TARGET-30-PARASL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARASL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARASL-10A-01D	DNA	EFO	SRS379640		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARASL-10A-01D Catch-131199 library	PAIRED	GENOMIC	WXS	Hybrid Selection	165	65.6852022727273	Catch-131199	SRX210015	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-02	TARGET-30-PARASL-10A-01D Catch-131199 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0KW1ACXX120202.7.TCTGCAAG.C829.TARGET-30-PARASL-10A-01D.1.bam	SRR633116	@dbgap@:reads/SRP012002/SRS379640/SRX210015/SRR633116/SRR633116.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARBGP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBGP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBGP-01A-01D	DNA	EFO	SRS375182		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARBGP-01A-01D Catch-131214 library	PAIRED	GENOMIC	WXS	Hybrid Selection	156	59.9893683333333	Catch-131214	SRX210783	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARBGP-01A-01D Catch-131214 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079LACXX120123.5.CATGCTTA.C829.TARGET-30-PARBGP-01A-01D.3.bam	SRR634291	@dbgap@:reads/SRP012002/SRS375182/SRX210783/SRR634291/SRR634291.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARBGP.seg.txt	3
TARGET-30-PARBGP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBGP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBGP-01A-01D	DNA	EFO	SRS375182		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARBGP-01A-01D Catch-131214 library	PAIRED	GENOMIC	WXS	Hybrid Selection	156	59.9893683333333	Catch-131214	SRX210783	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARBGP-01A-01D Catch-131214 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079LACXX120123.5.CATGCTTA.C829.TARGET-30-PARBGP-01A-01D.3.bam	SRR634291	@dbgap@:reads/SRP012002/SRS375182/SRX210783/SRR634291/SRR634291.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARBGP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBGP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBGP-10A-01D	DNA	EFO	SRS375181		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARBGP-10A-01D Catch-131216 library	PAIRED	GENOMIC	WXS	Hybrid Selection	165	72.0793461111111	Catch-131216	SRX210309	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARBGP-10A-01D Catch-131216 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.4.TCTGGCGA.C829.TARGET-30-PARBGP-10A-01D.3.bam	SRR633295	@dbgap@:reads/SRP012002/SRS375181/SRX210309/SRR633295/SRR633295.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARBGP.seg.txt	3
TARGET-30-PARBGP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBGP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBGP-10A-01D	DNA	EFO	SRS375181		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARBGP-10A-01D Catch-131216 library	PAIRED	GENOMIC	WXS	Hybrid Selection	165	72.0793461111111	Catch-131216	SRX210309	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARBGP-10A-01D Catch-131216 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.4.TCTGGCGA.C829.TARGET-30-PARBGP-10A-01D.3.bam	SRR633295	@dbgap@:reads/SRP012002/SRS375181/SRX210309/SRR633295/SRR633295.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARBLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBLH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBLH-01A-01D	DNA	EFO	SRS379847		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARBLH-01A-01D Catch-131202 library	PAIRED	GENOMIC	WXS	Hybrid Selection	160	75.5264294444444	Catch-131202	SRX210292	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARBLH-01A-01D Catch-131202 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.6.CTACCAGG.C829.TARGET-30-PARBLH-01A-01D.3.bam	SRR633235	@dbgap@:reads/SRP012002/SRS379847/SRX210292/SRR633235/SRR633235.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARBLH.seg.txt	3
TARGET-30-PARBLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBLH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBLH-01A-01D	DNA	EFO	SRS379847		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARBLH-01A-01D Catch-131202 library	PAIRED	GENOMIC	WXS	Hybrid Selection	160	75.5264294444444	Catch-131202	SRX210292	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARBLH-01A-01D Catch-131202 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.6.CTACCAGG.C829.TARGET-30-PARBLH-01A-01D.3.bam	SRR633235	@dbgap@:reads/SRP012002/SRS379847/SRX210292/SRR633235/SRR633235.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARBLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBLH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBLH-10A-01D	DNA	EFO	SRS379568		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARBLH-10A-01D Catch-131215 library	PAIRED	GENOMIC	WXS	Hybrid Selection	162	67.9045916666667	Catch-131215	SRX209889	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARBLH-10A-01D Catch-131215 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.2.GGTCCAGA.C829.TARGET-30-PARBLH-10A-01D.3.bam	SRR631563	@dbgap@:reads/SRP012002/SRS379568/SRX209889/SRR631563/SRR631563.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARBLH.seg.txt	3
TARGET-30-PARBLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARBLH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARBLH-10A-01D	DNA	EFO	SRS379568		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARBLH-10A-01D Catch-131215 library	PAIRED	GENOMIC	WXS	Hybrid Selection	162	67.9045916666667	Catch-131215	SRX209889	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARBLH-10A-01D Catch-131215 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.2.GGTCCAGA.C829.TARGET-30-PARBLH-10A-01D.3.bam	SRR631563	@dbgap@:reads/SRP012002/SRS379568/SRX209889/SRR631563/SRR631563.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARCRR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARCRR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARCRR-01A-01D	DNA	EFO	SRS379880		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARCRR-01A-01D Catch-131226 library	PAIRED	GENOMIC	WXS	Hybrid Selection	158	63.284535	Catch-131226	SRX210580	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARCRR-01A-01D Catch-131226 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.1.GCACATCT.C829.TARGET-30-PARCRR-01A-01D.3.bam	SRR632979	@dbgap@:reads/SRP012002/SRS379880/SRX210580/SRR632979/SRR632979.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARCRR.seg.txt	3
TARGET-30-PARCRR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARCRR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARCRR-01A-01D	DNA	EFO	SRS379880		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARCRR-01A-01D Catch-131226 library	PAIRED	GENOMIC	WXS	Hybrid Selection	158	63.284535	Catch-131226	SRX210580	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARCRR-01A-01D Catch-131226 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.1.GCACATCT.C829.TARGET-30-PARCRR-01A-01D.3.bam	SRR632979	@dbgap@:reads/SRP012002/SRS379880/SRX210580/SRR632979/SRR632979.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARCRR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARCRR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARCRR-10A-01D	DNA	EFO	SRS379879		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARCRR-10A-01D Catch-131219 library	PAIRED	GENOMIC	WXS	Hybrid Selection	160	63.2937655555556	Catch-131219	SRX210576	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-20	TARGET-30-PARCRR-10A-01D Catch-131219 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0DP7ACXX120120.8.AGGTTATC.C829.TARGET-30-PARCRR-10A-01D.3.bam	SRR633331	@dbgap@:reads/SRP012002/SRS379879/SRX210576/SRR633331/SRR633331.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARCRR.seg.txt	3
TARGET-30-PARCRR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARCRR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARCRR-10A-01D	DNA	EFO	SRS379879		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARCRR-10A-01D Catch-131219 library	PAIRED	GENOMIC	WXS	Hybrid Selection	160	63.2937655555556	Catch-131219	SRX210576	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-20	TARGET-30-PARCRR-10A-01D Catch-131219 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0DP7ACXX120120.8.AGGTTATC.C829.TARGET-30-PARCRR-10A-01D.3.bam	SRR633331	@dbgap@:reads/SRP012002/SRS379879/SRX210576/SRR633331/SRR633331.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARDCK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDCK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDCK-01A-01D	DNA	EFO	SRS375330		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARDCK-01A-01D Catch-131217 library	PAIRED	GENOMIC	WXS	Hybrid Selection	158	66.6589566666667	Catch-131217	SRX210952	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARDCK-01A-01D Catch-131217 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C07DFACXX120123.4.AGGATCTA.C829.TARGET-30-PARDCK-01A-01D.3.bam	SRR635119	@dbgap@:reads/SRP012002/SRS375330/SRX210952/SRR635119/SRR635119.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARDCK.seg.txt	3
TARGET-30-PARDCK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDCK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDCK-01A-01D	DNA	EFO	SRS375330		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARDCK-01A-01D Catch-131217 library	PAIRED	GENOMIC	WXS	Hybrid Selection	158	66.6589566666667	Catch-131217	SRX210952	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARDCK-01A-01D Catch-131217 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C07DFACXX120123.4.AGGATCTA.C829.TARGET-30-PARDCK-01A-01D.3.bam	SRR635119	@dbgap@:reads/SRP012002/SRS375330/SRX210952/SRR635119/SRR635119.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARDCK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDCK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDCK-10A-01D	DNA	EFO	SRS375329		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARDCK-10A-01D Catch-131255 library	PAIRED	GENOMIC	WXS	Hybrid Selection	160	68.872115	Catch-131255	SRX210289	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARDCK-10A-01D Catch-131255 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079LACXX120123.2.TCTCGGTC.C829.TARGET-30-PARDCK-10A-01D.3.bam	SRR632961	@dbgap@:reads/SRP012002/SRS375329/SRX210289/SRR632961/SRR632961.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARDCK.seg.txt	3
TARGET-30-PARDCK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDCK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDCK-10A-01D	DNA	EFO	SRS375329		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARDCK-10A-01D Catch-131255 library	PAIRED	GENOMIC	WXS	Hybrid Selection	160	68.872115	Catch-131255	SRX210289	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARDCK-10A-01D Catch-131255 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079LACXX120123.2.TCTCGGTC.C829.TARGET-30-PARDCK-10A-01D.3.bam	SRR632961	@dbgap@:reads/SRP012002/SRS375329/SRX210289/SRR632961/SRR632961.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARDIW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDIW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDIW-01A-01D	DNA	EFO	SRS375328		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARDIW-01A-01D Catch-131246 library	PAIRED	GENOMIC	WXS	Hybrid Selection	155	61.4916727777778	Catch-131246	SRX210894	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARDIW-01A-01D Catch-131246 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.3.TGTAATCA.C829.TARGET-30-PARDIW-01A-01D.3.bam	SRR634762	@dbgap@:reads/SRP012002/SRS375328/SRX210894/SRR634762/SRR634762.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARDIW.seg.txt	3
TARGET-30-PARDIW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDIW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDIW-01A-01D	DNA	EFO	SRS375328		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARDIW-01A-01D Catch-131246 library	PAIRED	GENOMIC	WXS	Hybrid Selection	155	61.4916727777778	Catch-131246	SRX210894	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARDIW-01A-01D Catch-131246 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.3.TGTAATCA.C829.TARGET-30-PARDIW-01A-01D.3.bam	SRR634762	@dbgap@:reads/SRP012002/SRS375328/SRX210894/SRR634762/SRR634762.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARDIW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDIW-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDIW-10A-01D	DNA	EFO	SRS375327		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARDIW-10A-01D Catch-131223 library	PAIRED	GENOMIC	WXS	Hybrid Selection	159	64.9536638888889	Catch-131223	SRX210921	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARDIW-10A-01D Catch-131223 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.4.ATTCCTCT.C829.TARGET-30-PARDIW-10A-01D.3.bam	SRR634845	@dbgap@:reads/SRP012002/SRS375327/SRX210921/SRR634845/SRR634845.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARDIW.seg.txt	3
TARGET-30-PARDIW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDIW-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDIW-10A-01D	DNA	EFO	SRS375327		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARDIW-10A-01D Catch-131223 library	PAIRED	GENOMIC	WXS	Hybrid Selection	159	64.9536638888889	Catch-131223	SRX210921	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARDIW-10A-01D Catch-131223 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.4.ATTCCTCT.C829.TARGET-30-PARDIW-10A-01D.3.bam	SRR634845	@dbgap@:reads/SRP012002/SRS375327/SRX210921/SRR634845/SRR634845.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARDVT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDVT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDVT-01A-01D	DNA	EFO	SRS379874		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARDVT-01A-01D Catch-131231 library	PAIRED	GENOMIC	WXS	Hybrid Selection	164	62.5767961111111	Catch-131231	SRX210557	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARDVT-01A-01D Catch-131231 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079LACXX120123.6.GTCATCTA.C829.TARGET-30-PARDVT-01A-01D.3.bam	SRR632840	@dbgap@:reads/SRP012002/SRS379874/SRX210557/SRR632840/SRR632840.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARDVT.seg.txt	3
TARGET-30-PARDVT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDVT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDVT-01A-01D	DNA	EFO	SRS379874		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARDVT-01A-01D Catch-131231 library	PAIRED	GENOMIC	WXS	Hybrid Selection	164	62.5767961111111	Catch-131231	SRX210557	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARDVT-01A-01D Catch-131231 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079LACXX120123.6.GTCATCTA.C829.TARGET-30-PARDVT-01A-01D.3.bam	SRR632840	@dbgap@:reads/SRP012002/SRS379874/SRX210557/SRR632840/SRR632840.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARDVT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDVT-14A	organism part	EFO	Bone Marrow	NCIt	"Bone Marrow Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDVT-14A-01D	DNA	EFO	SRS380227		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARDVT-14A-01D Catch-131212 library	PAIRED	GENOMIC	WXS	Hybrid Selection	157	61.599785	Catch-131212	SRX211276	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARDVT-14A-01D Catch-131212 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.4.ACTGTATC.C829.TARGET-30-PARDVT-10A-01D.3.bam	SRR636045	@dbgap@:reads/SRP012002/SRS380227/SRX211276/SRR636045/SRR636045.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARDVT.seg.txt	3
TARGET-30-PARDVT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDVT-14A	organism part	EFO	Bone Marrow	NCIt	"Bone Marrow Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDVT-14A-01D	DNA	EFO	SRS380227		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARDVT-14A-01D Catch-131212 library	PAIRED	GENOMIC	WXS	Hybrid Selection	157	61.599785	Catch-131212	SRX211276	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARDVT-14A-01D Catch-131212 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.4.ACTGTATC.C829.TARGET-30-PARDVT-10A-01D.3.bam	SRR636045	@dbgap@:reads/SRP012002/SRS380227/SRX211276/SRR636045/SRR636045.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARDYU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDYU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDYU-01A-01D	DNA	EFO	SRS380070		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARDYU-01A-01D Catch-131238 library	PAIRED	GENOMIC	WXS	Hybrid Selection	154	60.3877811111111	Catch-131238	SRX210890	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARDYU-01A-01D Catch-131238 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.3.TGCTCGAC.C829.TARGET-30-PARDYU-01A-01D.3.bam	SRR634902	@dbgap@:reads/SRP012002/SRS380070/SRX210890/SRR634902/SRR634902.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARDYU.seg.txt	3
TARGET-30-PARDYU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDYU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDYU-01A-01D	DNA	EFO	SRS380070		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARDYU-01A-01D Catch-131238 library	PAIRED	GENOMIC	WXS	Hybrid Selection	154	60.3877811111111	Catch-131238	SRX210890	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARDYU-01A-01D Catch-131238 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.3.TGCTCGAC.C829.TARGET-30-PARDYU-01A-01D.3.bam	SRR634902	@dbgap@:reads/SRP012002/SRS380070/SRX210890/SRR634902/SRR634902.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARDYU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDYU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDYU-10A-01D	DNA	EFO	SRS380049		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARDYU-10A-01D Catch-131204 library	PAIRED	GENOMIC	WXS	Hybrid Selection	162	65.6366233333333	Catch-131204	SRX210833	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARDYU-10A-01D Catch-131204 run	sequencing assay	EFO	151	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.4.GCACACGA.C829.TARGET-30-PARDYU-10A-01D.3.bam	SRR634520	@dbgap@:reads/SRP012002/SRS380049/SRX210833/SRR634520/SRR634520.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARDYU.seg.txt	3
TARGET-30-PARDYU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARDYU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARDYU-10A-01D	DNA	EFO	SRS380049		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARDYU-10A-01D Catch-131204 library	PAIRED	GENOMIC	WXS	Hybrid Selection	162	65.6366233333333	Catch-131204	SRX210833	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARDYU-10A-01D Catch-131204 run	sequencing assay	EFO	151	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.4.GCACACGA.C829.TARGET-30-PARDYU-10A-01D.3.bam	SRR634520	@dbgap@:reads/SRP012002/SRS380049/SRX210833/SRR634520/SRR634520.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAREAG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAREAG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAREAG-01A-01D	DNA	EFO	SRS380871		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAREAG-01A-01D Catch-131031 library	PAIRED	GENOMIC	WXS	Hybrid Selection	153	59.4747433333333	Catch-131031	SRX211894	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PAREAG-01A-01D Catch-131031 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0703ACXX120123.3.TCTGCAAG.C829.TARGET-30-PAREAG-01A-01D.1.bam	SRR637463	@dbgap@:reads/SRP012002/SRS380871/SRX211894/SRR637463/SRR637463.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAREAG.seg.txt	3
TARGET-30-PAREAG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAREAG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAREAG-01A-01D	DNA	EFO	SRS380871		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAREAG-01A-01D Catch-131031 library	PAIRED	GENOMIC	WXS	Hybrid Selection	153	59.4747433333333	Catch-131031	SRX211894	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PAREAG-01A-01D Catch-131031 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0703ACXX120123.3.TCTGCAAG.C829.TARGET-30-PAREAG-01A-01D.1.bam	SRR637463	@dbgap@:reads/SRP012002/SRS380871/SRX211894/SRR637463/SRR637463.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PAREAG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAREAG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAREAG-10A-01D	DNA	EFO	SRS380873		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAREAG-10A-01D Catch-130942 library	PAIRED	GENOMIC	WXS	Hybrid Selection	155	61.0909283333333	Catch-130942	SRX211905	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PAREAG-10A-01D Catch-130942 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079CACXX120123.4.CGTTACCA.C829.TARGET-30-PAREAG-10A-01D.1.bam	SRR637553	@dbgap@:reads/SRP012002/SRS380873/SRX211905/SRR637553/SRR637553.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PAREAG.seg.txt	3
TARGET-30-PAREAG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PAREAG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PAREAG-10A-01D	DNA	EFO	SRS380873		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PAREAG-10A-01D Catch-130942 library	PAIRED	GENOMIC	WXS	Hybrid Selection	155	61.0909283333333	Catch-130942	SRX211905	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PAREAG-10A-01D Catch-130942 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079CACXX120123.4.CGTTACCA.C829.TARGET-30-PAREAG-10A-01D.1.bam	SRR637553	@dbgap@:reads/SRP012002/SRS380873/SRX211905/SRR637553/SRR637553.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARETE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARETE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARETE-01A-01D	DNA	EFO	SRS380082		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARETE-01A-01D Catch-131210 library	PAIRED	GENOMIC	WXS	Hybrid Selection	161	65.3156277777778	Catch-131210	SRX210948	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARETE-01A-01D Catch-131210 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.5.AGGTAAGG.C829.TARGET-30-PARETE-01A-01D.3.bam	SRR635042	@dbgap@:reads/SRP012002/SRS380082/SRX210948/SRR635042/SRR635042.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARETE.seg.txt	3
TARGET-30-PARETE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARETE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARETE-01A-01D	DNA	EFO	SRS380082		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARETE-01A-01D Catch-131210 library	PAIRED	GENOMIC	WXS	Hybrid Selection	161	65.3156277777778	Catch-131210	SRX210948	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARETE-01A-01D Catch-131210 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.5.AGGTAAGG.C829.TARGET-30-PARETE-01A-01D.3.bam	SRR635042	@dbgap@:reads/SRP012002/SRS380082/SRX210948/SRR635042/SRR635042.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARETE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARETE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARETE-10A-01D	DNA	EFO	SRS380075		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARETE-10A-01D Catch-131259 library	PAIRED	GENOMIC	WXS	Hybrid Selection	159	62.4427094444445	Catch-131259	SRX210918	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARETE-10A-01D Catch-131259 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.3.ACAGTTGA.C829.TARGET-30-PARETE-10A-01D.3.bam	SRR635083	@dbgap@:reads/SRP012002/SRS380075/SRX210918/SRR635083/SRR635083.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARETE.seg.txt	3
TARGET-30-PARETE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARETE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARETE-10A-01D	DNA	EFO	SRS380075		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARETE-10A-01D Catch-131259 library	PAIRED	GENOMIC	WXS	Hybrid Selection	159	62.4427094444445	Catch-131259	SRX210918	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARETE-10A-01D Catch-131259 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.3.ACAGTTGA.C829.TARGET-30-PARETE-10A-01D.3.bam	SRR635083	@dbgap@:reads/SRP012002/SRS380075/SRX210918/SRR635083/SRR635083.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARFWB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARFWB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARFWB-01A-01D	DNA	EFO	SRS375326		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARFWB-01A-01D Catch-131211 library	PAIRED	GENOMIC	WXS	Hybrid Selection	155	62.5553783333333	Catch-131211	SRX209999	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARFWB-01A-01D Catch-131211 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C07DFACXX120123.4.AACAATGG.C829.TARGET-30-PARFWB-01A-01D.3.bam	SRR632126	@dbgap@:reads/SRP012002/SRS375326/SRX209999/SRR632126/SRR632126.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARFWB.seg.txt	3
TARGET-30-PARFWB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARFWB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARFWB-01A-01D	DNA	EFO	SRS375326		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARFWB-01A-01D Catch-131211 library	PAIRED	GENOMIC	WXS	Hybrid Selection	155	62.5553783333333	Catch-131211	SRX209999	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARFWB-01A-01D Catch-131211 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C07DFACXX120123.4.AACAATGG.C829.TARGET-30-PARFWB-01A-01D.3.bam	SRR632126	@dbgap@:reads/SRP012002/SRS375326/SRX209999/SRR632126/SRR632126.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARFWB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARFWB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARFWB-10A-01D	DNA	EFO	SRS375325		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARFWB-10A-01D Catch-131269 library	PAIRED	GENOMIC	WXS	Hybrid Selection	157	62.4381244444444	Catch-131269	SRX211259	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARFWB-10A-01D Catch-131269 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079LACXX120123.1.CGCCTTCC.C829.TARGET-30-PARFWB-10A-01D.3.bam	SRR636429	@dbgap@:reads/SRP012002/SRS375325/SRX211259/SRR636429/SRR636429.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARFWB.seg.txt	3
TARGET-30-PARFWB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARFWB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARFWB-10A-01D	DNA	EFO	SRS375325		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARFWB-10A-01D Catch-131269 library	PAIRED	GENOMIC	WXS	Hybrid Selection	157	62.4381244444444	Catch-131269	SRX211259	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARFWB-10A-01D Catch-131269 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079LACXX120123.1.CGCCTTCC.C829.TARGET-30-PARFWB-10A-01D.3.bam	SRR636429	@dbgap@:reads/SRP012002/SRS375325/SRX211259/SRR636429/SRR636429.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARGHY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGHY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGHY-01A-01D	DNA	EFO	SRS379852		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARGHY-01A-01D Catch-131118 library	PAIRED	GENOMIC	WXS	Hybrid Selection	161	65.822495	Catch-131118	SRX210315	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-02	TARGET-30-PARGHY-01A-01D Catch-131118 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0KW1ACXX120202.7.CATGCTTA.C829.TARGET-30-PARGHY-01A-01D.1.bam	SRR632894	@dbgap@:reads/SRP012002/SRS379852/SRX210315/SRR632894/SRR632894.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARGHY.seg.txt	3
TARGET-30-PARGHY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGHY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGHY-01A-01D	DNA	EFO	SRS379852		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARGHY-01A-01D Catch-131118 library	PAIRED	GENOMIC	WXS	Hybrid Selection	161	65.822495	Catch-131118	SRX210315	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-02	TARGET-30-PARGHY-01A-01D Catch-131118 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0KW1ACXX120202.7.CATGCTTA.C829.TARGET-30-PARGHY-01A-01D.1.bam	SRR632894	@dbgap@:reads/SRP012002/SRS379852/SRX210315/SRR632894/SRR632894.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARGHY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGHY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGHY-10A-01D	DNA	EFO	SRS379850		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARGHY-10A-01D Catch-131166 library	PAIRED	GENOMIC	WXS	Hybrid Selection	165	61.6097618181818	Catch-131166	SRX210306	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PARGHY-10A-01D Catch-131166 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DF6ACXX120206.8.AGTTGCTT.C829.TARGET-30-PARGHY-10A-01D.1.bam	SRR633271	@dbgap@:reads/SRP012002/SRS379850/SRX210306/SRR633271/SRR633271.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARGHY.seg.txt	3
TARGET-30-PARGHY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGHY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGHY-10A-01D	DNA	EFO	SRS379850		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARGHY-10A-01D Catch-131166 library	PAIRED	GENOMIC	WXS	Hybrid Selection	165	61.6097618181818	Catch-131166	SRX210306	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PARGHY-10A-01D Catch-131166 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DF6ACXX120206.8.AGTTGCTT.C829.TARGET-30-PARGHY-10A-01D.1.bam	SRR633271	@dbgap@:reads/SRP012002/SRS379850/SRX210306/SRR633271/SRR633271.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARGKK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGKK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGKK-01A-01D	DNA	EFO	SRS380224		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARGKK-01A-01D Catch-131260 library	PAIRED	GENOMIC	WXS	Hybrid Selection	167	69.8897438888889	Catch-131260	SRX211263	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARGKK-01A-01D Catch-131260 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C07DFACXX120123.4.AGCATGGA.C829.TARGET-30-PARGKK-01A-01D.3.bam	SRR635926	@dbgap@:reads/SRP012002/SRS380224/SRX211263/SRR635926/SRR635926.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARGKK.seg.txt	3
TARGET-30-PARGKK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGKK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGKK-01A-01D	DNA	EFO	SRS380224		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARGKK-01A-01D Catch-131260 library	PAIRED	GENOMIC	WXS	Hybrid Selection	167	69.8897438888889	Catch-131260	SRX211263	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARGKK-01A-01D Catch-131260 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C07DFACXX120123.4.AGCATGGA.C829.TARGET-30-PARGKK-01A-01D.3.bam	SRR635926	@dbgap@:reads/SRP012002/SRS380224/SRX211263/SRR635926/SRR635926.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARGKK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGKK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGKK-10A-01D	DNA	EFO	SRS379558		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARGKK-10A-01D Catch-131236 library	PAIRED	GENOMIC	WXS	Hybrid Selection	162	67.2702277777778	Catch-131236	SRX209835	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARGKK-10A-01D Catch-131236 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079LACXX120123.6.GACCTAAC.C829.TARGET-30-PARGKK-10A-01D.3.bam	SRR631350	@dbgap@:reads/SRP012002/SRS379558/SRX209835/SRR631350/SRR631350.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARGKK.seg.txt	3
TARGET-30-PARGKK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGKK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGKK-10A-01D	DNA	EFO	SRS379558		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARGKK-10A-01D Catch-131236 library	PAIRED	GENOMIC	WXS	Hybrid Selection	162	67.2702277777778	Catch-131236	SRX209835	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARGKK-10A-01D Catch-131236 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079LACXX120123.6.GACCTAAC.C829.TARGET-30-PARGKK-10A-01D.3.bam	SRR631350	@dbgap@:reads/SRP012002/SRS379558/SRX209835/SRR631350/SRR631350.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARGZK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGZK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGZK-01A-01D	DNA	EFO	SRS379851		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARGZK-01A-01D Catch-131261 library	PAIRED	GENOMIC	WXS	Hybrid Selection	159	62.5339383333333	Catch-131261	SRX210312	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARGZK-01A-01D Catch-131261 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.8.AGGTGCGA.C829.TARGET-30-PARGZK-01A-01D.3.bam	SRR632763	@dbgap@:reads/SRP012002/SRS379851/SRX210312/SRR632763/SRR632763.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARGZK.seg.txt	3
TARGET-30-PARGZK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGZK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGZK-01A-01D	DNA	EFO	SRS379851		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARGZK-01A-01D Catch-131261 library	PAIRED	GENOMIC	WXS	Hybrid Selection	159	62.5339383333333	Catch-131261	SRX210312	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARGZK-01A-01D Catch-131261 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.8.AGGTGCGA.C829.TARGET-30-PARGZK-01A-01D.3.bam	SRR632763	@dbgap@:reads/SRP012002/SRS379851/SRX210312/SRR632763/SRR632763.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARGZK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGZK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGZK-10A-01D	DNA	EFO	SRS380036		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARGZK-10A-01D Catch-131279 library	PAIRED	GENOMIC	WXS	Hybrid Selection	164	64.8476044444444	Catch-131279	SRX210770	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARGZK-10A-01D Catch-131279 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C07DFACXX120123.4.GAACCTAG.C829.TARGET-30-PARGZK-10A-01D.3.bam	SRR634331	@dbgap@:reads/SRP012002/SRS380036/SRX210770/SRR634331/SRR634331.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARGZK.seg.txt	3
TARGET-30-PARGZK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARGZK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARGZK-10A-01D	DNA	EFO	SRS380036		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARGZK-10A-01D Catch-131279 library	PAIRED	GENOMIC	WXS	Hybrid Selection	164	64.8476044444444	Catch-131279	SRX210770	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARGZK-10A-01D Catch-131279 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C07DFACXX120123.4.GAACCTAG.C829.TARGET-30-PARGZK-10A-01D.3.bam	SRR634331	@dbgap@:reads/SRP012002/SRS380036/SRX210770/SRR634331/SRR634331.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARHDE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHDE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHDE-01A-01D	DNA	EFO	SRS380016		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARHDE-01A-01D Catch-131283 library	PAIRED	GENOMIC	WXS	Hybrid Selection	160	65.6575838888889	Catch-131283	SRX210724	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARHDE-01A-01D Catch-131283 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.6.GACCGTTG.C829.TARGET-30-PARHDE-01A-01D.3.bam	SRR633840	@dbgap@:reads/SRP012002/SRS380016/SRX210724/SRR633840/SRR633840.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARHDE.seg.txt	3
TARGET-30-PARHDE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHDE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHDE-10A-01D	DNA	EFO	SRS380048		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARHDE-10A-01D Catch-131229 library	PAIRED	GENOMIC	WXS	Hybrid Selection	157	66.2301916666667	Catch-131229	SRX210827	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARHDE-10A-01D Catch-131229 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.4.GACAGTAA.C829.TARGET-30-PARHDE-10A-01D.3.bam	SRR634666	@dbgap@:reads/SRP012002/SRS380048/SRX210827/SRR634666/SRR634666.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARHDE.seg.txt	3
TARGET-30-PARHUX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHUX-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHUX-01A-01D	DNA	EFO	SRS379625		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARHUX-01A-01D Catch-131240 library	PAIRED	GENOMIC	WXS	Hybrid Selection	147	69.375245	Catch-131240	SRX209948	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARHUX-01A-01D Catch-131240 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079LACXX120123.3.CAGGAGCC.C829.TARGET-30-PARHUX-01A-01D.3.bam	SRR631912	@dbgap@:reads/SRP012002/SRS379625/SRX209948/SRR631912/SRR631912.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARHUX.seg.txt	3
TARGET-30-PARHUX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHUX-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHUX-01A-01D	DNA	EFO	SRS379625		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARHUX-01A-01D Catch-131240 library	PAIRED	GENOMIC	WXS	Hybrid Selection	147	69.375245	Catch-131240	SRX209948	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARHUX-01A-01D Catch-131240 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079LACXX120123.3.CAGGAGCC.C829.TARGET-30-PARHUX-01A-01D.3.bam	SRR631912	@dbgap@:reads/SRP012002/SRS379625/SRX209948/SRR631912/SRR631912.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARHUX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHUX-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHUX-10A-01D	DNA	EFO	SRS379635		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARHUX-10A-01D Catch-131258 library	PAIRED	GENOMIC	WXS	Hybrid Selection	161	64.4696016666667	Catch-131258	SRX209987	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARHUX-10A-01D Catch-131258 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.6.ATTATCAA.C829.TARGET-30-PARHUX-10A-01D.3.bam	SRR632045	@dbgap@:reads/SRP012002/SRS379635/SRX209987/SRR632045/SRR632045.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARHUX.seg.txt	3
TARGET-30-PARHUX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARHUX-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARHUX-10A-01D	DNA	EFO	SRS379635		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARHUX-10A-01D Catch-131258 library	PAIRED	GENOMIC	WXS	Hybrid Selection	161	64.4696016666667	Catch-131258	SRX209987	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARHUX-10A-01D Catch-131258 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.6.ATTATCAA.C829.TARGET-30-PARHUX-10A-01D.3.bam	SRR632045	@dbgap@:reads/SRP012002/SRS379635/SRX209987/SRR632045/SRR632045.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARJEN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARJEN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARJEN-01A-01D	DNA	EFO	SRS380054		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARJEN-01A-01D Catch-131294 library	PAIRED	GENOMIC	WXS	Hybrid Selection	164	67.0839966666667	Catch-131294	SRX210859	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARJEN-01A-01D Catch-131294 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079LACXX120123.3.TTGTCTAT.C829.TARGET-30-PARJEN-01A-01D.3.bam	SRR634442	@dbgap@:reads/SRP012002/SRS380054/SRX210859/SRR634442/SRR634442.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARJEN.seg.txt	3
TARGET-30-PARJEN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARJEN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARJEN-01A-01D	DNA	EFO	SRS380054		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARJEN-01A-01D Catch-131294 library	PAIRED	GENOMIC	WXS	Hybrid Selection	164	67.0839966666667	Catch-131294	SRX210859	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARJEN-01A-01D Catch-131294 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079LACXX120123.3.TTGTCTAT.C829.TARGET-30-PARJEN-01A-01D.3.bam	SRR634442	@dbgap@:reads/SRP012002/SRS380054/SRX210859/SRR634442/SRR634442.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARJEN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARJEN-14A	organism part	EFO	Bone Marrow	NCIt	"Bone Marrow Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARJEN-14A-01D	DNA	EFO	SRS380040		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARJEN-14A-01D Catch-131276 library	PAIRED	GENOMIC	WXS	Hybrid Selection	146	68.7902444444444	Catch-131276	SRX210790	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARJEN-14A-01D Catch-131276 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.4.CCTACCAT.C829.TARGET-30-PARJEN-10A-01D.3.bam	SRR634155	@dbgap@:reads/SRP012002/SRS380040/SRX210790/SRR634155/SRR634155.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARJEN.seg.txt	3
TARGET-30-PARJEN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARJEN-14A	organism part	EFO	Bone Marrow	NCIt	"Bone Marrow Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARJEN-14A-01D	DNA	EFO	SRS380040		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARJEN-14A-01D Catch-131276 library	PAIRED	GENOMIC	WXS	Hybrid Selection	146	68.7902444444444	Catch-131276	SRX210790	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARJEN-14A-01D Catch-131276 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.4.CCTACCAT.C829.TARGET-30-PARJEN-10A-01D.3.bam	SRR634155	@dbgap@:reads/SRP012002/SRS380040/SRX210790/SRR634155/SRR634155.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARJMX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARJMX-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARJMX-01A-01D	DNA	EFO	SRS380030		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARJMX-01A-01D Catch-131281 library	PAIRED	GENOMIC	WXS	Hybrid Selection	155	59.908235	Catch-131281	SRX210749	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARJMX-01A-01D Catch-131281 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.3.GCCTAGCC.C829.TARGET-30-PARJMX-01A-01D.3.bam	SRR634108	@dbgap@:reads/SRP012002/SRS380030/SRX210749/SRR634108/SRR634108.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARJMX.seg.txt	3
TARGET-30-PARJMX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARJMX-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARJMX-01A-01D	DNA	EFO	SRS380030		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARJMX-01A-01D Catch-131281 library	PAIRED	GENOMIC	WXS	Hybrid Selection	155	59.908235	Catch-131281	SRX210749	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARJMX-01A-01D Catch-131281 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.3.GCCTAGCC.C829.TARGET-30-PARJMX-01A-01D.3.bam	SRR634108	@dbgap@:reads/SRP012002/SRS380030/SRX210749/SRR634108/SRR634108.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARJMX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARJMX-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARJMX-10A-01D	DNA	EFO	SRS379561		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARJMX-10A-01D Catch-131203 library	PAIRED	GENOMIC	WXS	Hybrid Selection	159	62.3060177777778	Catch-131203	SRX209842	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARJMX-10A-01D Catch-131203 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.6.ACCAACTG.C829.TARGET-30-PARJMX-10A-01D.3.bam	SRR631390	@dbgap@:reads/SRP012002/SRS379561/SRX209842/SRR631390/SRR631390.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARJMX.seg.txt	3
TARGET-30-PARJMX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARJMX-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARJMX-10A-01D	DNA	EFO	SRS379561		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARJMX-10A-01D Catch-131203 library	PAIRED	GENOMIC	WXS	Hybrid Selection	159	62.3060177777778	Catch-131203	SRX209842	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARJMX-10A-01D Catch-131203 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.6.ACCAACTG.C829.TARGET-30-PARJMX-10A-01D.3.bam	SRR631390	@dbgap@:reads/SRP012002/SRS379561/SRX209842/SRR631390/SRR631390.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARKAG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKAG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKAG-01A-01D	DNA	EFO	SRS380186		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARKAG-01A-01D Catch-131245 library	PAIRED	GENOMIC	WXS	Hybrid Selection	160	63.7243233333333	Catch-131245	SRX211122	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARKAG-01A-01D Catch-131245 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.8.TATCTGCC.C829.TARGET-30-PARKAG-01A-01D.3.bam	SRR635301	@dbgap@:reads/SRP012002/SRS380186/SRX211122/SRR635301/SRR635301.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARKAG.seg.txt	3
TARGET-30-PARKAG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKAG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKAG-01A-01D	DNA	EFO	SRS380186		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARKAG-01A-01D Catch-131245 library	PAIRED	GENOMIC	WXS	Hybrid Selection	160	63.7243233333333	Catch-131245	SRX211122	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARKAG-01A-01D Catch-131245 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.8.TATCTGCC.C829.TARGET-30-PARKAG-01A-01D.3.bam	SRR635301	@dbgap@:reads/SRP012002/SRS380186/SRX211122/SRR635301/SRR635301.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARKAG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKAG-14A	organism part	EFO	Bone Marrow	NCIt	"Bone Marrow Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKAG-14A-01D	DNA	EFO	SRS379564		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARKAG-14A-01D Catch-131241 library	PAIRED	GENOMIC	WXS	Hybrid Selection	142	71.4681266666667	Catch-131241	SRX209865	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARKAG-14A-01D Catch-131241 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079LACXX120123.8.CCTATGCC.C829.TARGET-30-PARKAG-10A-01D.3.bam	SRR631483	@dbgap@:reads/SRP012002/SRS379564/SRX209865/SRR631483/SRR631483.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARKAG.seg.txt	3
TARGET-30-PARKAG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKAG-14A	organism part	EFO	Bone Marrow	NCIt	"Bone Marrow Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKAG-14A-01D	DNA	EFO	SRS379564		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARKAG-14A-01D Catch-131241 library	PAIRED	GENOMIC	WXS	Hybrid Selection	142	71.4681266666667	Catch-131241	SRX209865	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARKAG-14A-01D Catch-131241 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079LACXX120123.8.CCTATGCC.C829.TARGET-30-PARKAG-10A-01D.3.bam	SRR631483	@dbgap@:reads/SRP012002/SRS379564/SRX209865/SRR631483/SRR631483.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARKGJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKGJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKGJ-01A-01D	DNA	EFO	SRS375907		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARKGJ-01A-01D Catch-131251 library	PAIRED	GENOMIC	WXS	Hybrid Selection	160	63.612835	Catch-131251	SRX211139	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARKGJ-01A-01D Catch-131251 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079LACXX120123.7.AACTTGAC.C829.TARGET-30-PARKGJ-01A-01D.3.bam	SRR635353	@dbgap@:reads/SRP012002/SRS375907/SRX211139/SRR635353/SRR635353.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARKGJ.seg.txt	3
TARGET-30-PARKGJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKGJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKGJ-01A-01D	DNA	EFO	SRS375907		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARKGJ-01A-01D Catch-131251 library	PAIRED	GENOMIC	WXS	Hybrid Selection	160	63.612835	Catch-131251	SRX211139	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARKGJ-01A-01D Catch-131251 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079LACXX120123.7.AACTTGAC.C829.TARGET-30-PARKGJ-01A-01D.3.bam	SRR635353	@dbgap@:reads/SRP012002/SRS375907/SRX211139/SRR635353/SRR635353.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARKGJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKGJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKGJ-10A-01D	DNA	EFO	SRS375906		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARKGJ-10A-01D Catch-131222 library	PAIRED	GENOMIC	WXS	Hybrid Selection	160	65.8238261111111	Catch-131222	SRX210845	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARKGJ-10A-01D Catch-131222 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079LACXX120123.8.CTAACTCG.C829.TARGET-30-PARKGJ-10A-01D.3.bam	SRR634366	@dbgap@:reads/SRP012002/SRS375906/SRX210845/SRR634366/SRR634366.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARKGJ.seg.txt	3
TARGET-30-PARKGJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKGJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKGJ-10A-01D	DNA	EFO	SRS375906		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARKGJ-10A-01D Catch-131222 library	PAIRED	GENOMIC	WXS	Hybrid Selection	160	65.8238261111111	Catch-131222	SRX210845	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARKGJ-10A-01D Catch-131222 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079LACXX120123.8.CTAACTCG.C829.TARGET-30-PARKGJ-10A-01D.3.bam	SRR634366	@dbgap@:reads/SRP012002/SRS375906/SRX210845/SRR634366/SRR634366.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARKNP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKNP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKNP-01A-01D	DNA	EFO	SRS379849		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARKNP-01A-01D Catch-131237 library	PAIRED	GENOMIC	WXS	Hybrid Selection	151	57.6065427777778	Catch-131237	SRX210301	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARKNP-01A-01D Catch-131237 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079LACXX120123.5.GCAGCCGT.C829.TARGET-30-PARKNP-01A-01D.3.bam	SRR632858	@dbgap@:reads/SRP012002/SRS379849/SRX210301/SRR632858/SRR632858.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARKNP.seg.txt	3
TARGET-30-PARKNP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKNP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKNP-01A-01D	DNA	EFO	SRS379849		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARKNP-01A-01D Catch-131237 library	PAIRED	GENOMIC	WXS	Hybrid Selection	151	57.6065427777778	Catch-131237	SRX210301	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARKNP-01A-01D Catch-131237 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079LACXX120123.5.GCAGCCGT.C829.TARGET-30-PARKNP-01A-01D.3.bam	SRR632858	@dbgap@:reads/SRP012002/SRS379849/SRX210301/SRR632858/SRR632858.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARKNP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKNP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKNP-10A-01D	DNA	EFO	SRS380184		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARKNP-10A-01D Catch-131282 library	PAIRED	GENOMIC	WXS	Hybrid Selection	159	64.384905	Catch-131282	SRX211112	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARKNP-10A-01D Catch-131282 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079LACXX120123.6.GTCCACAG.C829.TARGET-30-PARKNP-10A-01D.3.bam	SRR635627	@dbgap@:reads/SRP012002/SRS380184/SRX211112/SRR635627/SRR635627.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARKNP.seg.txt	3
TARGET-30-PARKNP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKNP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKNP-10A-01D	DNA	EFO	SRS380184		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARKNP-10A-01D Catch-131282 library	PAIRED	GENOMIC	WXS	Hybrid Selection	159	64.384905	Catch-131282	SRX211112	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARKNP-10A-01D Catch-131282 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079LACXX120123.6.GTCCACAG.C829.TARGET-30-PARKNP-10A-01D.3.bam	SRR635627	@dbgap@:reads/SRP012002/SRS380184/SRX211112/SRR635627/SRR635627.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARKZF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKZF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKZF-01A-01D	DNA	EFO	SRS379634		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARKZF-01A-01D Catch-131218 library	PAIRED	GENOMIC	WXS	Hybrid Selection	158	66.8479433333333	Catch-131218	SRX209986	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARKZF-01A-01D Catch-131218 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.8.GTCTGATG.C829.TARGET-30-PARKZF-01A-01D.3.bam	SRR632107	@dbgap@:reads/SRP012002/SRS379634/SRX209986/SRR632107/SRR632107.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARKZF.seg.txt	3
TARGET-30-PARKZF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKZF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKZF-01A-01D	DNA	EFO	SRS379634		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARKZF-01A-01D Catch-131218 library	PAIRED	GENOMIC	WXS	Hybrid Selection	158	66.8479433333333	Catch-131218	SRX209986	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARKZF-01A-01D Catch-131218 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.8.GTCTGATG.C829.TARGET-30-PARKZF-01A-01D.3.bam	SRR632107	@dbgap@:reads/SRP012002/SRS379634/SRX209986/SRR632107/SRR632107.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARKZF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKZF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKZF-10A-01D	DNA	EFO	SRS380174		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARKZF-10A-01D Catch-131271 library	PAIRED	GENOMIC	WXS	Hybrid Selection	161	66.6495211111111	Catch-131271	SRX211080	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARKZF-10A-01D Catch-131271 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.5.CAATAGTC.C829.TARGET-30-PARKZF-10A-01D.3.bam	SRR635612	@dbgap@:reads/SRP012002/SRS380174/SRX211080/SRR635612/SRR635612.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARKZF.seg.txt	3
TARGET-30-PARKZF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARKZF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARKZF-10A-01D	DNA	EFO	SRS380174		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARKZF-10A-01D Catch-131271 library	PAIRED	GENOMIC	WXS	Hybrid Selection	161	66.6495211111111	Catch-131271	SRX211080	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARKZF-10A-01D Catch-131271 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.5.CAATAGTC.C829.TARGET-30-PARKZF-10A-01D.3.bam	SRR635612	@dbgap@:reads/SRP012002/SRS380174/SRX211080/SRR635612/SRR635612.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARLMK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARLMK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARLMK-01A-01D	DNA	EFO	SRS380055		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARLMK-01A-01D Catch-131247 library	PAIRED	GENOMIC	WXS	Hybrid Selection	162	67.3717766666667	Catch-131247	SRX210860	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARLMK-01A-01D Catch-131247 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079LACXX120123.8.TCGCTAGA.C829.TARGET-30-PARLMK-01A-01D.3.bam	SRR634460	@dbgap@:reads/SRP012002/SRS380055/SRX210860/SRR634460/SRR634460.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARLMK.seg.txt	3
TARGET-30-PARLMK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARLMK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARLMK-10A-01D	DNA	EFO	SRS379848		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARLMK-10A-01D Catch-131253 library	PAIRED	GENOMIC	WXS	Hybrid Selection	161	68.7824333333333	Catch-131253	SRX210299	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARLMK-10A-01D Catch-131253 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079LACXX120123.2.TCGCCTTG.C829.TARGET-30-PARLMK-10A-01D.3.bam	SRR633253	@dbgap@:reads/SRP012002/SRS379848/SRX210299/SRR633253/SRR633253.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARLMK.seg.txt	3
TARGET-30-PARLTG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARLTG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARLTG-01A-01D	DNA	EFO	SRS379649		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARLTG-01A-01D Catch-131256 library	PAIRED	GENOMIC	WXS	Hybrid Selection	164	64.7538816666667	Catch-131256	SRX210054	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARLTG-01A-01D Catch-131256 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079LACXX120123.4.AATGTTCT.C829.TARGET-30-PARLTG-01A-01D.3.bam	SRR633156	@dbgap@:reads/SRP012002/SRS379649/SRX210054/SRR633156/SRR633156.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARLTG.seg.txt	3
TARGET-30-PARLTG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARLTG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARLTG-01A-01D	DNA	EFO	SRS379649		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARLTG-01A-01D Catch-131256 library	PAIRED	GENOMIC	WXS	Hybrid Selection	164	64.7538816666667	Catch-131256	SRX210054	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARLTG-01A-01D Catch-131256 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079LACXX120123.4.AATGTTCT.C829.TARGET-30-PARLTG-01A-01D.3.bam	SRR633156	@dbgap@:reads/SRP012002/SRS379649/SRX210054/SRR633156/SRR633156.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARLTG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARLTG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARLTG-10A-01D	DNA	EFO	SRS379651		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARLTG-10A-01D Catch-131206 library	PAIRED	GENOMIC	WXS	Hybrid Selection	161	64.3680455555556	Catch-131206	SRX210059	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARLTG-10A-01D Catch-131206 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.3.CGTTACCA.C829.TARGET-30-PARLTG-10A-01D.3.bam	SRR632375	@dbgap@:reads/SRP012002/SRS379651/SRX210059/SRR632375/SRR632375.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARLTG.seg.txt	3
TARGET-30-PARLTG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARLTG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARLTG-10A-01D	DNA	EFO	SRS379651		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARLTG-10A-01D Catch-131206 library	PAIRED	GENOMIC	WXS	Hybrid Selection	161	64.3680455555556	Catch-131206	SRX210059	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARLTG-10A-01D Catch-131206 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.3.CGTTACCA.C829.TARGET-30-PARLTG-10A-01D.3.bam	SRR632375	@dbgap@:reads/SRP012002/SRS379651/SRX210059/SRR632375/SRR632375.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARMDD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMDD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMDD-01A-01D	DNA	EFO	SRS380192		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARMDD-01A-01D Catch-131252 library	PAIRED	GENOMIC	WXS	Hybrid Selection	144	65.5303716666667	Catch-131252	SRX211151	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARMDD-01A-01D Catch-131252 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.6.TGTCGGAT.C829.TARGET-30-PARMDD-01A-01D.3.bam	SRR635384	@dbgap@:reads/SRP012002/SRS380192/SRX211151/SRR635384/SRR635384.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARMDD.seg.txt	3
TARGET-30-PARMDD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMDD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMDD-01A-01D	DNA	EFO	SRS380192		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARMDD-01A-01D Catch-131252 library	PAIRED	GENOMIC	WXS	Hybrid Selection	144	65.5303716666667	Catch-131252	SRX211151	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARMDD-01A-01D Catch-131252 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.6.TGTCGGAT.C829.TARGET-30-PARMDD-01A-01D.3.bam	SRR635384	@dbgap@:reads/SRP012002/SRS380192/SRX211151/SRR635384/SRR635384.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARMDD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMDD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMDD-10A-01D	DNA	EFO	SRS380172		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARMDD-10A-01D Catch-131234 library	PAIRED	GENOMIC	WXS	Hybrid Selection	159	62.7298733333333	Catch-131234	SRX211070	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARMDD-10A-01D Catch-131234 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.5.GTAACATC.C829.TARGET-30-PARMDD-10A-01D.3.bam	SRR635581	@dbgap@:reads/SRP012002/SRS380172/SRX211070/SRR635581/SRR635581.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARMDD.seg.txt	3
TARGET-30-PARMDD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMDD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMDD-10A-01D	DNA	EFO	SRS380172		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARMDD-10A-01D Catch-131234 library	PAIRED	GENOMIC	WXS	Hybrid Selection	159	62.7298733333333	Catch-131234	SRX211070	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARMDD-10A-01D Catch-131234 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.5.GTAACATC.C829.TARGET-30-PARMDD-10A-01D.3.bam	SRR635581	@dbgap@:reads/SRP012002/SRS380172/SRX211070/SRR635581/SRR635581.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARMLF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMLF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMLF-01A-01D	DNA	EFO	SRS380081		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARMLF-01A-01D Catch-131286 library	PAIRED	GENOMIC	WXS	Hybrid Selection	164	65.6395583333333	Catch-131286	SRX210945	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-20	TARGET-30-PARMLF-01A-01D Catch-131286 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0DP7ACXX120120.8.TTGAGCCT.C829.TARGET-30-PARMLF-01A-01D.3.bam	SRR634920	@dbgap@:reads/SRP012002/SRS380081/SRX210945/SRR634920/SRR634920.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARMLF.seg.txt	3
TARGET-30-PARMLF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMLF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMLF-01A-01D	DNA	EFO	SRS380081		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARMLF-01A-01D Catch-131286 library	PAIRED	GENOMIC	WXS	Hybrid Selection	164	65.6395583333333	Catch-131286	SRX210945	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-20	TARGET-30-PARMLF-01A-01D Catch-131286 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0DP7ACXX120120.8.TTGAGCCT.C829.TARGET-30-PARMLF-01A-01D.3.bam	SRR634920	@dbgap@:reads/SRP012002/SRS380081/SRX210945/SRR634920/SRR634920.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARMLF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMLF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMLF-10A-01D	DNA	EFO	SRS380194		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARMLF-10A-01D Catch-131280 library	PAIRED	GENOMIC	WXS	Hybrid Selection	161	63.7703316666667	Catch-131280	SRX211159	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-20	TARGET-30-PARMLF-10A-01D Catch-131280 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0DP7ACXX120120.8.GACCAGGA.C829.TARGET-30-PARMLF-10A-01D.3.bam	SRR635689	@dbgap@:reads/SRP012002/SRS380194/SRX211159/SRR635689/SRR635689.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARMLF.seg.txt	3
TARGET-30-PARMLF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMLF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMLF-10A-01D	DNA	EFO	SRS380194		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARMLF-10A-01D Catch-131280 library	PAIRED	GENOMIC	WXS	Hybrid Selection	161	63.7703316666667	Catch-131280	SRX211159	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-20	TARGET-30-PARMLF-10A-01D Catch-131280 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0DP7ACXX120120.8.GACCAGGA.C829.TARGET-30-PARMLF-10A-01D.3.bam	SRR635689	@dbgap@:reads/SRP012002/SRS380194/SRX211159/SRR635689/SRR635689.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARMPP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMPP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMPP-01A-01D	DNA	EFO	SRS379638		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARMPP-01A-01D Catch-131230 library	PAIRED	GENOMIC	WXS	Hybrid Selection	155	60.5034077777778	Catch-131230	SRX210006	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARMPP-01A-01D Catch-131230 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.1.TTACGCAC.C829.TARGET-30-PARMPP-01A-01D.3.bam	SRR632167	@dbgap@:reads/SRP012002/SRS379638/SRX210006/SRR632167/SRR632167.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARMPP.seg.txt	3
TARGET-30-PARMPP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMPP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMPP-01A-01D	DNA	EFO	SRS379638		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARMPP-01A-01D Catch-131230 library	PAIRED	GENOMIC	WXS	Hybrid Selection	155	60.5034077777778	Catch-131230	SRX210006	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARMPP-01A-01D Catch-131230 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.1.TTACGCAC.C829.TARGET-30-PARMPP-01A-01D.3.bam	SRR632167	@dbgap@:reads/SRP012002/SRS379638/SRX210006/SRR632167/SRR632167.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARMPP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMPP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMPP-10A-01D	DNA	EFO	SRS379623		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARMPP-10A-01D Catch-131292 library	PAIRED	GENOMIC	WXS	Hybrid Selection	167	71.859235	Catch-131292	SRX209939	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARMPP-10A-01D Catch-131292 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.7.TATCCAGG.C829.TARGET-30-PARMPP-10A-01D.3.bam	SRR631930	@dbgap@:reads/SRP012002/SRS379623/SRX209939/SRR631930/SRR631930.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARMPP.seg.txt	3
TARGET-30-PARMPP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARMPP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARMPP-10A-01D	DNA	EFO	SRS379623		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARMPP-10A-01D Catch-131292 library	PAIRED	GENOMIC	WXS	Hybrid Selection	167	71.859235	Catch-131292	SRX209939	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARMPP-10A-01D Catch-131292 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.7.TATCCAGG.C829.TARGET-30-PARMPP-10A-01D.3.bam	SRR631930	@dbgap@:reads/SRP012002/SRS379623/SRX209939/SRR631930/SRR631930.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARNLJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNLJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNLJ-01A-01D	DNA	EFO	SRS380042		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARNLJ-01A-01D Catch-131265 library	PAIRED	GENOMIC	WXS	Hybrid Selection	144	63.80059	Catch-131265	SRX210800	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARNLJ-01A-01D Catch-131265 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079LACXX120123.8.ATAGCGTC.C829.TARGET-30-PARNLJ-01A-01D.3.bam	SRR634212	@dbgap@:reads/SRP012002/SRS380042/SRX210800/SRR634212/SRR634212.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARNLJ.seg.txt	3
TARGET-30-PARNLJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNLJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNLJ-10A-01D	DNA	EFO	SRS380188		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARNLJ-10A-01D Catch-131275 library	PAIRED	GENOMIC	WXS	Hybrid Selection	164	67.4071494444444	Catch-131275	SRX211132	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARNLJ-10A-01D Catch-131275 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.7.TCGGAATG.C829.TARGET-30-PARNLJ-10A-01D.3.bam	SRR635319	@dbgap@:reads/SRP012002/SRS380188/SRX211132/SRR635319/SRR635319.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARNLJ.seg.txt	3
TARGET-30-PARNNG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNNG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNNG-01A-01D	DNA	EFO	SRS379563		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARNNG-01A-01D Catch-131232 library	PAIRED	GENOMIC	WXS	Hybrid Selection	162	67.479095	Catch-131232	SRX209860	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARNNG-01A-01D Catch-131232 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079LACXX120123.6.CTGTAATC.C829.TARGET-30-PARNNG-01A-01D.3.bam	SRR631447	@dbgap@:reads/SRP012002/SRS379563/SRX209860/SRR631447/SRR631447.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARNNG.seg.txt	3
TARGET-30-PARNNG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNNG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNNG-01A-01D	DNA	EFO	SRS379563		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARNNG-01A-01D Catch-131232 library	PAIRED	GENOMIC	WXS	Hybrid Selection	162	67.479095	Catch-131232	SRX209860	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARNNG-01A-01D Catch-131232 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079LACXX120123.6.CTGTAATC.C829.TARGET-30-PARNNG-01A-01D.3.bam	SRR631447	@dbgap@:reads/SRP012002/SRS379563/SRX209860/SRR631447/SRR631447.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARNNG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNNG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNNG-10A-01D	DNA	EFO	SRS380219		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARNNG-10A-01D Catch-131295 library	PAIRED	GENOMIC	WXS	Hybrid Selection	167	68.6236361111111	Catch-131295	SRX211246	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARNNG-10A-01D Catch-131295 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079LACXX120123.3.TCTGCAAG.C829.TARGET-30-PARNNG-10A-01D.3.bam	SRR635805	@dbgap@:reads/SRP012002/SRS380219/SRX211246/SRR635805/SRR635805.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARNNG.seg.txt	3
TARGET-30-PARNNG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNNG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNNG-10A-01D	DNA	EFO	SRS380219		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARNNG-10A-01D Catch-131295 library	PAIRED	GENOMIC	WXS	Hybrid Selection	167	68.6236361111111	Catch-131295	SRX211246	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARNNG-10A-01D Catch-131295 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079LACXX120123.3.TCTGCAAG.C829.TARGET-30-PARNNG-10A-01D.3.bam	SRR635805	@dbgap@:reads/SRP012002/SRS380219/SRX211246/SRR635805/SRR635805.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARNTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNTS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNTS-01A-01D	DNA	EFO	SRS380202		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARNTS-01A-01D Catch-131257 library	PAIRED	GENOMIC	WXS	Hybrid Selection	161	64.5802033333333	Catch-131257	SRX211185	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARNTS-01A-01D Catch-131257 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079LACXX120123.8.ACTAAGAC.C829.TARGET-30-PARNTS-01A-01D.3.bam	SRR636112	@dbgap@:reads/SRP012002/SRS380202/SRX211185/SRR636112/SRR636112.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARNTS.seg.txt	3
TARGET-30-PARNTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNTS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNTS-01A-01D	DNA	EFO	SRS380202		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARNTS-01A-01D Catch-131257 library	PAIRED	GENOMIC	WXS	Hybrid Selection	161	64.5802033333333	Catch-131257	SRX211185	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARNTS-01A-01D Catch-131257 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079LACXX120123.8.ACTAAGAC.C829.TARGET-30-PARNTS-01A-01D.3.bam	SRR636112	@dbgap@:reads/SRP012002/SRS380202/SRX211185/SRR636112/SRR636112.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARNTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNTS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNTS-10A-01D	DNA	EFO	SRS380046		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARNTS-10A-01D Catch-131277 library	PAIRED	GENOMIC	WXS	Hybrid Selection	162	70.2041505555556	Catch-131277	SRX210820	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARNTS-10A-01D Catch-131277 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079LACXX120123.5.GTCGCCTT.C829.TARGET-30-PARNTS-10A-01D.3.bam	SRR634273	@dbgap@:reads/SRP012002/SRS380046/SRX210820/SRR634273/SRR634273.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARNTS.seg.txt	3
TARGET-30-PARNTS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARNTS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARNTS-10A-01D	DNA	EFO	SRS380046		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARNTS-10A-01D Catch-131277 library	PAIRED	GENOMIC	WXS	Hybrid Selection	162	70.2041505555556	Catch-131277	SRX210820	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARNTS-10A-01D Catch-131277 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079LACXX120123.5.GTCGCCTT.C829.TARGET-30-PARNTS-10A-01D.3.bam	SRR634273	@dbgap@:reads/SRP012002/SRS380046/SRX210820/SRR634273/SRR634273.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARPGU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARPGU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARPGU-01A-01D	DNA	EFO	SRS379647		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARPGU-01A-01D Catch-131221 library	PAIRED	GENOMIC	WXS	Hybrid Selection	162	64.2869361111111	Catch-131221	SRX210045	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARPGU-01A-01D Catch-131221 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C07DFACXX120123.4.CCAACATT.C829.TARGET-30-PARPGU-01A-01D.3.bam	SRR632295	@dbgap@:reads/SRP012002/SRS379647/SRX210045/SRR632295/SRR632295.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARPGU.seg.txt	3
TARGET-30-PARPGU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARPGU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARPGU-01A-01D	DNA	EFO	SRS379647		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARPGU-01A-01D Catch-131221 library	PAIRED	GENOMIC	WXS	Hybrid Selection	162	64.2869361111111	Catch-131221	SRX210045	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARPGU-01A-01D Catch-131221 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C07DFACXX120123.4.CCAACATT.C829.TARGET-30-PARPGU-01A-01D.3.bam	SRR632295	@dbgap@:reads/SRP012002/SRS379647/SRX210045/SRR632295/SRR632295.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARPGU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARPGU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARPGU-10A-01D	DNA	EFO	SRS380212		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARPGU-10A-01D Catch-131243 library	PAIRED	GENOMIC	WXS	Hybrid Selection	162	69.2755783333333	Catch-131243	SRX211225	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARPGU-10A-01D Catch-131243 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079LACXX120123.3.CCTTCGCA.C829.TARGET-30-PARPGU-10A-01D.3.bam	SRR635995	@dbgap@:reads/SRP012002/SRS380212/SRX211225/SRR635995/SRR635995.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARPGU.seg.txt	3
TARGET-30-PARPGU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARPGU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARPGU-10A-01D	DNA	EFO	SRS380212		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARPGU-10A-01D Catch-131243 library	PAIRED	GENOMIC	WXS	Hybrid Selection	162	69.2755783333333	Catch-131243	SRX211225	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARPGU-10A-01D Catch-131243 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079LACXX120123.3.CCTTCGCA.C829.TARGET-30-PARPGU-10A-01D.3.bam	SRR635995	@dbgap@:reads/SRP012002/SRS380212/SRX211225/SRR635995/SRR635995.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARRLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARRLH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARRLH-01A-01D	DNA	EFO	SRS380225		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARRLH-01A-01D Catch-131288 library	PAIRED	GENOMIC	WXS	Hybrid Selection	144	62.3754255555556	Catch-131288	SRX211269	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARRLH-01A-01D Catch-131288 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.1.TACTTAGC.C829.TARGET-30-PARRLH-01A-01D.3.bam	SRR636081	@dbgap@:reads/SRP012002/SRS380225/SRX211269/SRR636081/SRR636081.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARRLH.seg.txt	3
TARGET-30-PARRLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARRLH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARRLH-01A-01D	DNA	EFO	SRS380225		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARRLH-01A-01D Catch-131288 library	PAIRED	GENOMIC	WXS	Hybrid Selection	144	62.3754255555556	Catch-131288	SRX211269	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARRLH-01A-01D Catch-131288 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.1.TACTTAGC.C829.TARGET-30-PARRLH-01A-01D.3.bam	SRR636081	@dbgap@:reads/SRP012002/SRS380225/SRX211269/SRR636081/SRR636081.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARRLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARRLH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARRLH-10A-01D	DNA	EFO	SRS380053		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARRLH-10A-01D Catch-131263 library	PAIRED	GENOMIC	WXS	Hybrid Selection	164	69.9438027777778	Catch-131263	SRX210855	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARRLH-10A-01D Catch-131263 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079LACXX120123.4.CACATCCT.C829.TARGET-30-PARRLH-10A-01D.3.bam	SRR634424	@dbgap@:reads/SRP012002/SRS380053/SRX210855/SRR634424/SRR634424.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARRLH.seg.txt	3
TARGET-30-PARRLH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARRLH-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARRLH-10A-01D	DNA	EFO	SRS380053		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARRLH-10A-01D Catch-131263 library	PAIRED	GENOMIC	WXS	Hybrid Selection	164	69.9438027777778	Catch-131263	SRX210855	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARRLH-10A-01D Catch-131263 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079LACXX120123.4.CACATCCT.C829.TARGET-30-PARRLH-10A-01D.3.bam	SRR634424	@dbgap@:reads/SRP012002/SRS380053/SRX210855/SRR634424/SRR634424.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARSBI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSBI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSBI-01A-01D	DNA	EFO	SRS379627		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARSBI-01A-01D Catch-131270 library	PAIRED	GENOMIC	WXS	Hybrid Selection	148	60.3927566666667	Catch-131270	SRX209954	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARSBI-01A-01D Catch-131270 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.5.CTATGCGT.C829.TARGET-30-PARSBI-01A-01D.3.bam	SRR631948	@dbgap@:reads/SRP012002/SRS379627/SRX209954/SRR631948/SRR631948.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARSBI.seg.txt	3
TARGET-30-PARSBI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSBI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSBI-01A-01D	DNA	EFO	SRS379627		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARSBI-01A-01D Catch-131270 library	PAIRED	GENOMIC	WXS	Hybrid Selection	148	60.3927566666667	Catch-131270	SRX209954	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARSBI-01A-01D Catch-131270 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.5.CTATGCGT.C829.TARGET-30-PARSBI-01A-01D.3.bam	SRR631948	@dbgap@:reads/SRP012002/SRS379627/SRX209954/SRR631948/SRR631948.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARSBI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSBI-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSBI-10A-01D	DNA	EFO	SRS379569		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARSBI-10A-01D Catch-131227 library	PAIRED	GENOMIC	WXS	Hybrid Selection	163	67.9596055555555	Catch-131227	SRX209891	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARSBI-10A-01D Catch-131227 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.4.GTATAACA.C829.TARGET-30-PARSBI-10A-01D.3.bam	SRR631698	@dbgap@:reads/SRP012002/SRS379569/SRX209891/SRR631698/SRR631698.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARSBI.seg.txt	3
TARGET-30-PARSBI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSBI-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSBI-10A-01D	DNA	EFO	SRS379569		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARSBI-10A-01D Catch-131227 library	PAIRED	GENOMIC	WXS	Hybrid Selection	163	67.9596055555555	Catch-131227	SRX209891	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARSBI-10A-01D Catch-131227 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.4.GTATAACA.C829.TARGET-30-PARSBI-10A-01D.3.bam	SRR631698	@dbgap@:reads/SRP012002/SRS379569/SRX209891/SRR631698/SRR631698.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARSRJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSRJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSRJ-01A-01D	DNA	EFO	SRS380043		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARSRJ-01A-01D Catch-131244 library	PAIRED	GENOMIC	WXS	Hybrid Selection	157	62.4278338888889	Catch-131244	SRX210805	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARSRJ-01A-01D Catch-131244 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079LACXX120123.6.TAAGCACA.C829.TARGET-30-PARSRJ-01A-01D.3.bam	SRR634500	@dbgap@:reads/SRP012002/SRS380043/SRX210805/SRR634500/SRR634500.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARSRJ.seg.txt	3
TARGET-30-PARSRJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSRJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSRJ-01A-01D	DNA	EFO	SRS380043		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARSRJ-01A-01D Catch-131244 library	PAIRED	GENOMIC	WXS	Hybrid Selection	157	62.4278338888889	Catch-131244	SRX210805	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARSRJ-01A-01D Catch-131244 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079LACXX120123.6.TAAGCACA.C829.TARGET-30-PARSRJ-01A-01D.3.bam	SRR634500	@dbgap@:reads/SRP012002/SRS380043/SRX210805/SRR634500/SRR634500.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARSRJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSRJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSRJ-10A-01D	DNA	EFO	SRS380017		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARSRJ-10A-01D Catch-131228 library	PAIRED	GENOMIC	WXS	Hybrid Selection	162	64.8563777777778	Catch-131228	SRX210728	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARSRJ-10A-01D Catch-131228 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079LACXX120123.1.CATAGCGA.C829.TARGET-30-PARSRJ-10A-01D.3.bam	SRR633877	@dbgap@:reads/SRP012002/SRS380017/SRX210728/SRR633877/SRR633877.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARSRJ.seg.txt	3
TARGET-30-PARSRJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARSRJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARSRJ-10A-01D	DNA	EFO	SRS380017		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARSRJ-10A-01D Catch-131228 library	PAIRED	GENOMIC	WXS	Hybrid Selection	162	64.8563777777778	Catch-131228	SRX210728	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARSRJ-10A-01D Catch-131228 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079LACXX120123.1.CATAGCGA.C829.TARGET-30-PARSRJ-10A-01D.3.bam	SRR633877	@dbgap@:reads/SRP012002/SRS380017/SRX210728/SRR633877/SRR633877.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARUPN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARUPN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARUPN-01A-01D	DNA	EFO	SRS380080		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARUPN-01A-01D Catch-131272 library	PAIRED	GENOMIC	WXS	Hybrid Selection	157	61.6152116666667	Catch-131272	SRX210937	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARUPN-01A-01D Catch-131272 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.5.CGCTATGT.C829.TARGET-30-PARUPN-01A-01D.3.bam	SRR635101	@dbgap@:reads/SRP012002/SRS380080/SRX210937/SRR635101/SRR635101.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARUPN.seg.txt	3
TARGET-30-PARUPN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARUPN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARUPN-01A-01D	DNA	EFO	SRS380080		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARUPN-01A-01D Catch-131272 library	PAIRED	GENOMIC	WXS	Hybrid Selection	157	61.6152116666667	Catch-131272	SRX210937	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARUPN-01A-01D Catch-131272 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.5.CGCTATGT.C829.TARGET-30-PARUPN-01A-01D.3.bam	SRR635101	@dbgap@:reads/SRP012002/SRS380080/SRX210937/SRR635101/SRR635101.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARUPN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARUPN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARUPN-10A-01D	DNA	EFO	SRS379570		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARUPN-10A-01D Catch-131296 library	PAIRED	GENOMIC	WXS	Hybrid Selection	169	70.6911361111111	Catch-131296	SRX209895	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARUPN-10A-01D Catch-131296 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079LACXX120123.3.TGTAACTC.C829.TARGET-30-PARUPN-10A-01D.3.bam	SRR631523	@dbgap@:reads/SRP012002/SRS379570/SRX209895/SRR631523/SRR631523.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARUPN.seg.txt	3
TARGET-30-PARUPN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARUPN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARUPN-10A-01D	DNA	EFO	SRS379570		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARUPN-10A-01D Catch-131296 library	PAIRED	GENOMIC	WXS	Hybrid Selection	169	70.6911361111111	Catch-131296	SRX209895	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARUPN-10A-01D Catch-131296 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079LACXX120123.3.TGTAACTC.C829.TARGET-30-PARUPN-10A-01D.3.bam	SRR631523	@dbgap@:reads/SRP012002/SRS379570/SRX209895/SRR631523/SRR631523.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARURB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARURB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARURB-01A-01D	DNA	EFO	SRS380018		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARURB-01A-01D Catch-131287 library	PAIRED	GENOMIC	WXS	Hybrid Selection	162	67.0129327777778	Catch-131287	SRX210729	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARURB-01A-01D Catch-131287 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.5.AAGGATGT.C829.TARGET-30-PARURB-01A-01D.3.bam	SRR633858	@dbgap@:reads/SRP012002/SRS380018/SRX210729/SRR633858/SRR633858.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARURB.seg.txt	3
TARGET-30-PARURB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARURB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARURB-01A-01D	DNA	EFO	SRS380018		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARURB-01A-01D Catch-131287 library	PAIRED	GENOMIC	WXS	Hybrid Selection	162	67.0129327777778	Catch-131287	SRX210729	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARURB-01A-01D Catch-131287 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.5.AAGGATGT.C829.TARGET-30-PARURB-01A-01D.3.bam	SRR633858	@dbgap@:reads/SRP012002/SRS380018/SRX210729/SRR633858/SRR633858.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARURB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARURB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARURB-10A-01D	DNA	EFO	SRS380038		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARURB-10A-01D Catch-131225 library	PAIRED	GENOMIC	WXS	Hybrid Selection	162	69.247835	Catch-131225	SRX210777	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-20	TARGET-30-PARURB-10A-01D Catch-131225 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0DP7ACXX120120.8.CTGCGGAT.C829.TARGET-30-PARURB-10A-01D.3.bam	SRR634194	@dbgap@:reads/SRP012002/SRS380038/SRX210777/SRR634194/SRR634194.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARURB.seg.txt	3
TARGET-30-PARURB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARURB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARURB-10A-01D	DNA	EFO	SRS380038		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARURB-10A-01D Catch-131225 library	PAIRED	GENOMIC	WXS	Hybrid Selection	162	69.247835	Catch-131225	SRX210777	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-20	TARGET-30-PARURB-10A-01D Catch-131225 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0DP7ACXX120120.8.CTGCGGAT.C829.TARGET-30-PARURB-10A-01D.3.bam	SRR634194	@dbgap@:reads/SRP012002/SRS380038/SRX210777/SRR634194/SRR634194.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARVFJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARVFJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARVFJ-01A-01D	DNA	EFO	SRS379653		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARVFJ-01A-01D Catch-131284 library	PAIRED	GENOMIC	WXS	Hybrid Selection	165	66.7102044444444	Catch-131284	SRX210066	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARVFJ-01A-01D Catch-131284 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079LACXX120123.4.GATATCCA.C829.TARGET-30-PARVFJ-01A-01D.3.bam	SRR632393	@dbgap@:reads/SRP012002/SRS379653/SRX210066/SRR632393/SRR632393.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARVFJ.seg.txt	3
TARGET-30-PARVFJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARVFJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARVFJ-10A-01D	DNA	EFO	SRS379628		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARVFJ-10A-01D Catch-131291 library	PAIRED	GENOMIC	WXS	Hybrid Selection	166	75.1599683333333	Catch-131291	SRX209959	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARVFJ-10A-01D Catch-131291 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079LACXX120123.6.TAATGAAC.C829.TARGET-30-PARVFJ-10A-01D.3.bam	SRR633041	@dbgap@:reads/SRP012002/SRS379628/SRX209959/SRR633041/SRR633041.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARVFJ.seg.txt	3
TARGET-30-PARVLK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARVLK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARVLK-01A-01D	DNA	EFO	SRS380050		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARVLK-01A-01D Catch-131249 library	PAIRED	GENOMIC	WXS	Hybrid Selection	157	67.3887561111111	Catch-131249	SRX210837	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARVLK-01A-01D Catch-131249 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.2.TTAATCAG.C829.TARGET-30-PARVLK-01A-01D.3.bam	SRR634629	@dbgap@:reads/SRP012002/SRS380050/SRX210837/SRR634629/SRR634629.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARVLK.seg.txt	3
TARGET-30-PARVLK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARVLK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARVLK-01A-01D	DNA	EFO	SRS380050		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARVLK-01A-01D Catch-131249 library	PAIRED	GENOMIC	WXS	Hybrid Selection	157	67.3887561111111	Catch-131249	SRX210837	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARVLK-01A-01D Catch-131249 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.2.TTAATCAG.C829.TARGET-30-PARVLK-01A-01D.3.bam	SRR634629	@dbgap@:reads/SRP012002/SRS380050/SRX210837/SRR634629/SRR634629.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARVLK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARVLK-14A	organism part	EFO	Bone Marrow	NCIt	"Bone Marrow Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARVLK-14A-01D	DNA	EFO	SRS379567		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARVLK-14A-01D Catch-131273 library	PAIRED	GENOMIC	WXS	Hybrid Selection	136	66.1855005555555	Catch-131273	SRX209878	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARVLK-14A-01D Catch-131273 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079LACXX120123.6.CTGTGGCG.C829.TARGET-30-PARVLK-10A-01D.3.bam	SRR631680	@dbgap@:reads/SRP012002/SRS379567/SRX209878/SRR631680/SRR631680.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARVLK.seg.txt	3
TARGET-30-PARVLK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARVLK-14A	organism part	EFO	Bone Marrow	NCIt	"Bone Marrow Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARVLK-14A-01D	DNA	EFO	SRS379567		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARVLK-14A-01D Catch-131273 library	PAIRED	GENOMIC	WXS	Hybrid Selection	136	66.1855005555555	Catch-131273	SRX209878	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARVLK-14A-01D Catch-131273 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079LACXX120123.6.CTGTGGCG.C829.TARGET-30-PARVLK-10A-01D.3.bam	SRR631680	@dbgap@:reads/SRP012002/SRS379567/SRX209878/SRR631680/SRR631680.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARVNT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARVNT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARVNT-01A-01D	DNA	EFO	SRS380047		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARVNT-01A-01D Catch-131208 library	PAIRED	GENOMIC	WXS	Hybrid Selection	162	65.7678322222222	Catch-131208	SRX210826	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARVNT-01A-01D Catch-131208 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C07DFACXX120123.4.AACGCATT.C829.TARGET-30-PARVNT-01A-01D.3.bam	SRR634384	@dbgap@:reads/SRP012002/SRS380047/SRX210826/SRR634384/SRR634384.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARVNT.seg.txt	3
TARGET-30-PARVNT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARVNT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARVNT-01A-01D	DNA	EFO	SRS380047		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARVNT-01A-01D Catch-131208 library	PAIRED	GENOMIC	WXS	Hybrid Selection	162	65.7678322222222	Catch-131208	SRX210826	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARVNT-01A-01D Catch-131208 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C07DFACXX120123.4.AACGCATT.C829.TARGET-30-PARVNT-01A-01D.3.bam	SRR634384	@dbgap@:reads/SRP012002/SRS380047/SRX210826/SRR634384/SRR634384.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARVNT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARVNT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARVNT-10A-01D	DNA	EFO	SRS379631		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARVNT-10A-01D Catch-131242 library	PAIRED	GENOMIC	WXS	Hybrid Selection	164	70.5853233333333	Catch-131242	SRX209971	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARVNT-10A-01D Catch-131242 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.7.TTGAATAG.C829.TARGET-30-PARVNT-10A-01D.3.bam	SRR632027	@dbgap@:reads/SRP012002/SRS379631/SRX209971/SRR632027/SRR632027.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARVNT.seg.txt	3
TARGET-30-PARVNT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARVNT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARVNT-10A-01D	DNA	EFO	SRS379631		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARVNT-10A-01D Catch-131242 library	PAIRED	GENOMIC	WXS	Hybrid Selection	164	70.5853233333333	Catch-131242	SRX209971	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARVNT-10A-01D Catch-131242 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.7.TTGAATAG.C829.TARGET-30-PARVNT-10A-01D.3.bam	SRR632027	@dbgap@:reads/SRP012002/SRS379631/SRX209971/SRR632027/SRR632027.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARYNK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARYNK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARYNK-01A-01D	DNA	EFO	SRS375196		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARYNK-01A-01D Catch-131209 library	PAIRED	GENOMIC	WXS	Hybrid Selection	153	62.9593327777778	Catch-131209	SRX210318	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARYNK-01A-01D Catch-131209 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.4.ACAGGTAT.C829.TARGET-30-PARYNK-01A-01D.3.bam	SRR633371	@dbgap@:reads/SRP012002/SRS375196/SRX210318/SRR633371/SRR633371.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARYNK.seg.txt	3
TARGET-30-PARYNK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARYNK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARYNK-01A-01D	DNA	EFO	SRS375196		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARYNK-01A-01D Catch-131209 library	PAIRED	GENOMIC	WXS	Hybrid Selection	153	62.9593327777778	Catch-131209	SRX210318	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARYNK-01A-01D Catch-131209 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.4.ACAGGTAT.C829.TARGET-30-PARYNK-01A-01D.3.bam	SRR633371	@dbgap@:reads/SRP012002/SRS375196/SRX210318/SRR633371/SRR633371.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARYNK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARYNK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARYNK-10A-01D	DNA	EFO	SRS375195		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARYNK-10A-01D Catch-131220 library	PAIRED	GENOMIC	WXS	Hybrid Selection	153	64.4747588888889	Catch-131220	SRX210907	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARYNK-10A-01D Catch-131220 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079LACXX120123.8.CAACTCTC.C829.TARGET-30-PARYNK-10A-01D.3.bam	SRR634781	@dbgap@:reads/SRP012002/SRS375195/SRX210907/SRR634781/SRR634781.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARYNK.seg.txt	3
TARGET-30-PARYNK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARYNK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARYNK-10A-01D	DNA	EFO	SRS375195		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARYNK-10A-01D Catch-131220 library	PAIRED	GENOMIC	WXS	Hybrid Selection	153	64.4747588888889	Catch-131220	SRX210907	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARYNK-10A-01D Catch-131220 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079LACXX120123.8.CAACTCTC.C829.TARGET-30-PARYNK-10A-01D.3.bam	SRR634781	@dbgap@:reads/SRP012002/SRS375195/SRX210907/SRR634781/SRR634781.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARYXW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARYXW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARYXW-01A-01D	DNA	EFO	SRS379845		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARYXW-01A-01D Catch-131248 library	PAIRED	GENOMIC	WXS	Hybrid Selection	154	61.7444555555555	Catch-131248	SRX210278	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARYXW-01A-01D Catch-131248 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.2.TGCAAGTA.C829.TARGET-30-PARYXW-01A-01D.3.bam	SRR632701	@dbgap@:reads/SRP012002/SRS379845/SRX210278/SRR632701/SRR632701.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARYXW.seg.txt	3
TARGET-30-PARYXW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARYXW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARYXW-01A-01D	DNA	EFO	SRS379845		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARYXW-01A-01D Catch-131248 library	PAIRED	GENOMIC	WXS	Hybrid Selection	154	61.7444555555555	Catch-131248	SRX210278	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARYXW-01A-01D Catch-131248 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.2.TGCAAGTA.C829.TARGET-30-PARYXW-01A-01D.3.bam	SRR632701	@dbgap@:reads/SRP012002/SRS379845/SRX210278/SRR632701/SRR632701.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARYXW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARYXW-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARYXW-10A-01D	DNA	EFO	SRS379868		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARYXW-10A-01D Catch-131274 library	PAIRED	GENOMIC	WXS	Hybrid Selection	163	67.7413588888889	Catch-131274	SRX210523	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARYXW-10A-01D Catch-131274 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079LACXX120123.5.CCAGTTAG.C829.TARGET-30-PARYXW-10A-01D.3.bam	SRR633446	@dbgap@:reads/SRP012002/SRS379868/SRX210523/SRR633446/SRR633446.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARYXW.seg.txt	3
TARGET-30-PARYXW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARYXW-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARYXW-10A-01D	DNA	EFO	SRS379868		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARYXW-10A-01D Catch-131274 library	PAIRED	GENOMIC	WXS	Hybrid Selection	163	67.7413588888889	Catch-131274	SRX210523	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARYXW-10A-01D Catch-131274 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079LACXX120123.5.CCAGTTAG.C829.TARGET-30-PARYXW-10A-01D.3.bam	SRR633446	@dbgap@:reads/SRP012002/SRS379868/SRX210523/SRR633446/SRR633446.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARZIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZIP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZIP-01A-01D	DNA	EFO	SRS375561		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARZIP-01A-01D Catch-131254 library	PAIRED	GENOMIC	WXS	Hybrid Selection	171	138.765238333333	Catch-131254	SRX210753	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARZIP-01A-01D Catch-131254 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.5.AAGACACT.C829.TARGET-30-PARZIP-01A-01D.4.bam	SRR633965	@dbgap@:reads/SRP012002/SRS375561/SRX210753/SRR633965/SRR633965.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARZIP.seg.txt	3
TARGET-30-PARZIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZIP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZIP-01A-01D	DNA	EFO	SRS375561		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARZIP-01A-01D Catch-131254 library	PAIRED	GENOMIC	WXS	Hybrid Selection	171	138.765238333333	Catch-131254	SRX210753	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARZIP-01A-01D Catch-131254 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.5.AAGACACT.C829.TARGET-30-PARZIP-01A-01D.4.bam	SRR633965	@dbgap@:reads/SRP012002/SRS375561/SRX210753/SRR633965/SRR633965.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARZIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZIP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZIP-10A-01D	DNA	EFO	SRS375560		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARZIP-10A-01D Catch-131207 library	PAIRED	GENOMIC	WXS	Hybrid Selection	166	69.1160594444444	Catch-131207	SRX209870	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARZIP-10A-01D Catch-131207 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.7.TCCTTGGT.C829.TARGET-30-PARZIP-10A-01D.4.bam	SRR631465	@dbgap@:reads/SRP012002/SRS375560/SRX209870/SRR631465/SRR631465.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARZIP.seg.txt	3
TARGET-30-PARZIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZIP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZIP-10A-01D	DNA	EFO	SRS375560		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARZIP-10A-01D Catch-131207 library	PAIRED	GENOMIC	WXS	Hybrid Selection	166	69.1160594444444	Catch-131207	SRX209870	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PARZIP-10A-01D Catch-131207 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.7.TCCTTGGT.C829.TARGET-30-PARZIP-10A-01D.4.bam	SRR631465	@dbgap@:reads/SRP012002/SRS375560/SRX209870/SRR631465/SRR631465.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARZMY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Metastatic Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZMY-06A	organism part	EFO	Metastatic Tumor	NCIt	"Metastatic"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZMY-06A-01D	DNA	EFO	SRS380173		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARZMY-06A-01D Catch-131130 library	PAIRED	GENOMIC	WXS	Hybrid Selection	163	63.3778590909091	Catch-131130	SRX211075	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-02	TARGET-30-PARZMY-06A-01D Catch-131130 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0KW1ACXX120202.2.GCACATCT.C829.TARGET-30-PARZMY-01A-01D.1.bam	SRR635599	@dbgap@:reads/SRP012002/SRS380173/SRX211075/SRR635599/SRR635599.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARZMY.seg.txt	3
TARGET-30-PARZMY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Metastatic Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZMY-06A	organism part	EFO	Metastatic Tumor	NCIt	"Metastatic"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZMY-06A-01D	DNA	EFO	SRS380173		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARZMY-06A-01D Catch-131130 library	PAIRED	GENOMIC	WXS	Hybrid Selection	163	63.3778590909091	Catch-131130	SRX211075	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-02	TARGET-30-PARZMY-06A-01D Catch-131130 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0KW1ACXX120202.2.GCACATCT.C829.TARGET-30-PARZMY-01A-01D.1.bam	SRR635599	@dbgap@:reads/SRP012002/SRS380173/SRX211075/SRR635599/SRR635599.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PARZMY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZMY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZMY-10A-01D	DNA	EFO	SRS380216		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARZMY-10A-01D Catch-131162 library	PAIRED	GENOMIC	WXS	Hybrid Selection	172	68.0119059090909	Catch-131162	SRX211237	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PARZMY-10A-01D Catch-131162 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DF6ACXX120206.8.ATTATCAA.C829.TARGET-30-PARZMY-10A-01D.1.bam	SRR636149	@dbgap@:reads/SRP012002/SRS380216/SRX211237/SRR636149/SRR636149.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PARZMY.seg.txt	3
TARGET-30-PARZMY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PARZMY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PARZMY-10A-01D	DNA	EFO	SRS380216		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PARZMY-10A-01D Catch-131162 library	PAIRED	GENOMIC	WXS	Hybrid Selection	172	68.0119059090909	Catch-131162	SRX211237	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PARZMY-10A-01D Catch-131162 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DF6ACXX120206.8.ATTATCAA.C829.TARGET-30-PARZMY-10A-01D.1.bam	SRR636149	@dbgap@:reads/SRP012002/SRS380216/SRX211237/SRR636149/SRR636149.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PASAAN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASAAN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASAAN-01A-01D	DNA	EFO	SRS379865		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASAAN-01A-01D Catch-131235 library	PAIRED	GENOMIC	WXS	Hybrid Selection	166	62.603885	Catch-131235	SRX210514	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASAAN-01A-01D Catch-131235 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.5.GAAGGAAG.C829.TARGET-30-PASAAN-01A-01D.3.bam	SRR633313	@dbgap@:reads/SRP012002/SRS379865/SRX210514/SRR633313/SRR633313.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASAAN.seg.txt	3
TARGET-30-PASAAN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASAAN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASAAN-01A-01D	DNA	EFO	SRS379865		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASAAN-01A-01D Catch-131235 library	PAIRED	GENOMIC	WXS	Hybrid Selection	166	62.603885	Catch-131235	SRX210514	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASAAN-01A-01D Catch-131235 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.5.GAAGGAAG.C829.TARGET-30-PASAAN-01A-01D.3.bam	SRR633313	@dbgap@:reads/SRP012002/SRS379865/SRX210514/SRR633313/SRR633313.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PASAAN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASAAN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASAAN-10A-01D	DNA	EFO	SRS379650		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASAAN-10A-01D Catch-131278 library	PAIRED	GENOMIC	WXS	Hybrid Selection	143	81.0794372222222	Catch-131278	SRX210057	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASAAN-10A-01D Catch-131278 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.1.TCCAGCAA.C829.TARGET-30-PASAAN-10A-01D.3.bam	SRR632373	@dbgap@:reads/SRP012002/SRS379650/SRX210057/SRR632373/SRR632373.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASAAN.seg.txt	3
TARGET-30-PASAAN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASAAN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASAAN-10A-01D	DNA	EFO	SRS379650		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASAAN-10A-01D Catch-131278 library	PAIRED	GENOMIC	WXS	Hybrid Selection	143	81.0794372222222	Catch-131278	SRX210057	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASAAN-10A-01D Catch-131278 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.1.TCCAGCAA.C829.TARGET-30-PASAAN-10A-01D.3.bam	SRR632373	@dbgap@:reads/SRP012002/SRS379650/SRX210057/SRR632373/SRR632373.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PASAJU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASAJU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASAJU-01A-01D	DNA	EFO	SRS379624		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASAJU-01A-01D Catch-131205 library	PAIRED	GENOMIC	WXS	Hybrid Selection	164	71.0325188888889	Catch-131205	SRX209944	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASAJU-01A-01D Catch-131205 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079LACXX120123.5.GAAGAAGT.C829.TARGET-30-PASAJU-01A-01D.3.bam	SRR633023	@dbgap@:reads/SRP012002/SRS379624/SRX209944/SRR633023/SRR633023.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASAJU.seg.txt	3
TARGET-30-PASAJU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASAJU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASAJU-01A-01D	DNA	EFO	SRS379624		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASAJU-01A-01D Catch-131205 library	PAIRED	GENOMIC	WXS	Hybrid Selection	164	71.0325188888889	Catch-131205	SRX209944	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASAJU-01A-01D Catch-131205 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079LACXX120123.5.GAAGAAGT.C829.TARGET-30-PASAJU-01A-01D.3.bam	SRR633023	@dbgap@:reads/SRP012002/SRS379624/SRX209944/SRR633023/SRR633023.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PASAJU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASAJU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASAJU-10A-01D	DNA	EFO	SRS380178		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASAJU-10A-01D Catch-131250 library	PAIRED	GENOMIC	WXS	Hybrid Selection	161	64.4282277777778	Catch-131250	SRX211092	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASAJU-10A-01D Catch-131250 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079LACXX120123.3.AGCAATTC.C829.TARGET-30-PASAJU-10A-01D.3.bam	SRR635944	@dbgap@:reads/SRP012002/SRS380178/SRX211092/SRR635944/SRR635944.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASAJU.seg.txt	3
TARGET-30-PASAJU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASAJU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASAJU-10A-01D	DNA	EFO	SRS380178		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASAJU-10A-01D Catch-131250 library	PAIRED	GENOMIC	WXS	Hybrid Selection	161	64.4282277777778	Catch-131250	SRX211092	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASAJU-10A-01D Catch-131250 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079LACXX120123.3.AGCAATTC.C829.TARGET-30-PASAJU-10A-01D.3.bam	SRR635944	@dbgap@:reads/SRP012002/SRS380178/SRX211092/SRR635944/SRR635944.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PASBGV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASBGV-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASBGV-01A-01D	DNA	EFO	SRS380090		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASBGV-01A-01D Catch-131239 library	PAIRED	GENOMIC	WXS	Hybrid Selection	160	68.3056511111111	Catch-131239	SRX210974	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASBGV-01A-01D Catch-131239 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079LACXX120123.2.TTCGCTGA.C829.TARGET-30-PASBGV-01A-01D.3.bam	SRR635006	@dbgap@:reads/SRP012002/SRS380090/SRX210974/SRR635006/SRR635006.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASBGV.seg.txt	3
TARGET-30-PASBGV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASBGV-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASBGV-10A-01D	DNA	EFO	SRS380044		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASBGV-10A-01D Catch-131233 library	PAIRED	GENOMIC	WXS	Hybrid Selection	158	63.3466361111111	Catch-131233	SRX210812	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASBGV-10A-01D Catch-131233 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C08ACXX120123.1.GCCGTCGA.C829.TARGET-30-PASBGV-10A-01D.3.bam	SRR634648	@dbgap@:reads/SRP012002/SRS380044/SRX210812/SRR634648/SRR634648.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASBGV.seg.txt	3
TARGET-30-PASCDX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCDX-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCDX-01A-01D	DNA	EFO	SRS379644		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASCDX-01A-01D Catch-131419 library	PAIRED	GENOMIC	WXS	Hybrid Selection	152	62.8759623529412	Catch-131419	SRX210031	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASCDX-01A-01D Catch-131419 run	sequencing assay	EFO	151	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C9BACXX120123.3.GGTCCAGA.C829.TARGET-30-PASCDX-01A-01D.3.bam	SRR633077	@dbgap@:reads/SRP012002/SRS379644/SRX210031/SRR633077/SRR633077.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASCDX.seg.txt	3
TARGET-30-PASCDX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCDX-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCDX-01A-01D	DNA	EFO	SRS379644		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASCDX-01A-01D Catch-131419 library	PAIRED	GENOMIC	WXS	Hybrid Selection	152	62.8759623529412	Catch-131419	SRX210031	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASCDX-01A-01D Catch-131419 run	sequencing assay	EFO	151	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C9BACXX120123.3.GGTCCAGA.C829.TARGET-30-PASCDX-01A-01D.3.bam	SRR633077	@dbgap@:reads/SRP012002/SRS379644/SRX210031/SRR633077/SRR633077.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PASCDX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCDX-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCDX-10A-01D	DNA	EFO	SRS380185		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASCDX-10A-01D Catch-131268 library	PAIRED	GENOMIC	WXS	Hybrid Selection	156	58.0707322222222	Catch-131268	SRX211118	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASCDX-10A-01D Catch-131268 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079LACXX120123.4.CAGCGGTA.C829.TARGET-30-PASCDX-10A-01D.3.bam	SRR635283	@dbgap@:reads/SRP012002/SRS380185/SRX211118/SRR635283/SRR635283.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASCDX.seg.txt	3
TARGET-30-PASCDX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCDX-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCDX-10A-01D	DNA	EFO	SRS380185		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASCDX-10A-01D Catch-131268 library	PAIRED	GENOMIC	WXS	Hybrid Selection	156	58.0707322222222	Catch-131268	SRX211118	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASCDX-10A-01D Catch-131268 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079LACXX120123.4.CAGCGGTA.C829.TARGET-30-PASCDX-10A-01D.3.bam	SRR635283	@dbgap@:reads/SRP012002/SRS380185/SRX211118/SRR635283/SRR635283.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PASCJJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCJJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCJJ-01A-01D	DNA	EFO	SRS379629		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASCJJ-01A-01D Catch-131430 library	PAIRED	GENOMIC	WXS	Hybrid Selection	157	63.61013	Catch-131430	SRX209962	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASCJJ-01A-01D Catch-131430 run	sequencing assay	EFO	151	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C9BACXX120123.4.GTATAACA.C829.TARGET-30-PASCJJ-01A-01D.3.bam	SRR631966	@dbgap@:reads/SRP012002/SRS379629/SRX209962/SRR631966/SRR631966.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASCJJ.seg.txt	3
TARGET-30-PASCJJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCJJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCJJ-01A-01D	DNA	EFO	SRS379629		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASCJJ-01A-01D Catch-131430 library	PAIRED	GENOMIC	WXS	Hybrid Selection	157	63.61013	Catch-131430	SRX209962	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASCJJ-01A-01D Catch-131430 run	sequencing assay	EFO	151	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C9BACXX120123.4.GTATAACA.C829.TARGET-30-PASCJJ-01A-01D.3.bam	SRR631966	@dbgap@:reads/SRP012002/SRS379629/SRX209962/SRR631966/SRR631966.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PASCJJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCJJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCJJ-10A-01D	DNA	EFO	SRS379633		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASCJJ-10A-01D Catch-131407 library	PAIRED	GENOMIC	WXS	Hybrid Selection	159	61.9735123529412	Catch-131407	SRX209979	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASCJJ-10A-01D Catch-131407 run	sequencing assay	EFO	151	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C9BACXX120123.3.ACCAACTG.C829.TARGET-30-PASCJJ-10A-01D.3.bam	SRR633060	@dbgap@:reads/SRP012002/SRS379633/SRX209979/SRR633060/SRR633060.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASCJJ.seg.txt	3
TARGET-30-PASCJJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASCJJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASCJJ-10A-01D	DNA	EFO	SRS379633		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASCJJ-10A-01D Catch-131407 library	PAIRED	GENOMIC	WXS	Hybrid Selection	159	61.9735123529412	Catch-131407	SRX209979	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASCJJ-10A-01D Catch-131407 run	sequencing assay	EFO	151	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C9BACXX120123.3.ACCAACTG.C829.TARGET-30-PASCJJ-10A-01D.3.bam	SRR633060	@dbgap@:reads/SRP012002/SRS379633/SRX209979/SRR633060/SRR633060.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PASEGA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASEGA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASEGA-01A-01D	DNA	EFO	SRS375981		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASEGA-01A-01D Catch-131484 library	PAIRED	GENOMIC	WXS	Hybrid Selection	161	71.2848264705882	Catch-131484	SRX210587	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-01	TARGET-30-PASEGA-01A-01D Catch-131484 run	sequencing assay	EFO	151	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0C1MACXX120201.4.TTGAGCCT.C829.TARGET-30-PASEGA-01A-01D.3.bam	SRR633465	@dbgap@:reads/SRP012002/SRS375981/SRX210587/SRR633465/SRR633465.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASEGA.seg.txt	3
TARGET-30-PASEGA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASEGA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASEGA-01A-01D	DNA	EFO	SRS375981		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASEGA-01A-01D Catch-131484 library	PAIRED	GENOMIC	WXS	Hybrid Selection	161	71.2848264705882	Catch-131484	SRX210587	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-01	TARGET-30-PASEGA-01A-01D Catch-131484 run	sequencing assay	EFO	151	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0C1MACXX120201.4.TTGAGCCT.C829.TARGET-30-PASEGA-01A-01D.3.bam	SRR633465	@dbgap@:reads/SRP012002/SRS375981/SRX210587/SRR633465/SRR633465.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PASEGA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASEGA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASEGA-10A-01D	DNA	EFO	SRS375980		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASEGA-10A-01D Catch-131472 library	PAIRED	GENOMIC	WXS	Hybrid Selection	157	61.6342682352941	Catch-131472	SRX209854	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-25	TARGET-30-PASEGA-10A-01D Catch-131472 run	sequencing assay	EFO	151	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0CL6ACXX120125.6.CGCTATGT.C829.TARGET-30-PASEGA-10A-01D.3.bam	SRR631430	@dbgap@:reads/SRP012002/SRS375980/SRX209854/SRR631430/SRR631430.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASEGA.seg.txt	3
TARGET-30-PASEGA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASEGA-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASEGA-10A-01D	DNA	EFO	SRS375980		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASEGA-10A-01D Catch-131472 library	PAIRED	GENOMIC	WXS	Hybrid Selection	157	61.6342682352941	Catch-131472	SRX209854	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-25	TARGET-30-PASEGA-10A-01D Catch-131472 run	sequencing assay	EFO	151	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0CL6ACXX120125.6.CGCTATGT.C829.TARGET-30-PASEGA-10A-01D.3.bam	SRR631430	@dbgap@:reads/SRP012002/SRS375980/SRX209854/SRR631430/SRR631430.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PASFGG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFGG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFGG-01A-01D	DNA	EFO	SRS375188		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASFGG-01A-01D Catch-131473 library	PAIRED	GENOMIC	WXS	Hybrid Selection	157	66.9989123529412	Catch-131473	SRX209848	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-20	TARGET-30-PASFGG-01A-01D Catch-131473 run	sequencing assay	EFO	151	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0DP7ACXX120120.4.CCAGTTAG.C829.TARGET-30-PASFGG-01A-01D.3.bam	SRR631641	@dbgap@:reads/SRP012002/SRS375188/SRX209848/SRR631641/SRR631641.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASFGG.seg.txt	3
TARGET-30-PASFGG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFGG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFGG-01A-01D	DNA	EFO	SRS375188		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASFGG-01A-01D Catch-131473 library	PAIRED	GENOMIC	WXS	Hybrid Selection	157	66.9989123529412	Catch-131473	SRX209848	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-20	TARGET-30-PASFGG-01A-01D Catch-131473 run	sequencing assay	EFO	151	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0DP7ACXX120120.4.CCAGTTAG.C829.TARGET-30-PASFGG-01A-01D.3.bam	SRR631641	@dbgap@:reads/SRP012002/SRS375188/SRX209848/SRR631641/SRR631641.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PASFGG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFGG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFGG-10A-01D	DNA	EFO	SRS375187		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASFGG-10A-01D Catch-131485 library	PAIRED	GENOMIC	WXS	Hybrid Selection	158	69.1397647058824	Catch-131485	SRX210906	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-25	TARGET-30-PASFGG-10A-01D Catch-131485 run	sequencing assay	EFO	151	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0CL6ACXX120125.5.AAGGATGT.C829.TARGET-30-PASFGG-10A-01D.3.bam	SRR635025	@dbgap@:reads/SRP012002/SRS375187/SRX210906/SRR635025/SRR635025.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASFGG.seg.txt	3
TARGET-30-PASFGG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFGG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFGG-10A-01D	DNA	EFO	SRS375187		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASFGG-10A-01D Catch-131485 library	PAIRED	GENOMIC	WXS	Hybrid Selection	158	69.1397647058824	Catch-131485	SRX210906	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-25	TARGET-30-PASFGG-10A-01D Catch-131485 run	sequencing assay	EFO	151	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0CL6ACXX120125.5.AAGGATGT.C829.TARGET-30-PASFGG-10A-01D.3.bam	SRR635025	@dbgap@:reads/SRP012002/SRS375187/SRX210906/SRR635025/SRR635025.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PASFNY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFNY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFNY-01A-01D	DNA	EFO	SRS380085		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASFNY-01A-01D Catch-131441 library	PAIRED	GENOMIC	WXS	Hybrid Selection	153	57.4365388235294	Catch-131441	SRX210969	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASFNY-01A-01D Catch-131441 run	sequencing assay	EFO	151	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C9BACXX120123.3.TTCGCTGA.C829.TARGET-30-PASFNY-01A-01D.3.bam	SRR635159	@dbgap@:reads/SRP012002/SRS380085/SRX210969/SRR635159/SRR635159.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASFNY.seg.txt	3
TARGET-30-PASFNY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFNY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFNY-01A-01D	DNA	EFO	SRS380085		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASFNY-01A-01D Catch-131441 library	PAIRED	GENOMIC	WXS	Hybrid Selection	153	57.4365388235294	Catch-131441	SRX210969	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASFNY-01A-01D Catch-131441 run	sequencing assay	EFO	151	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C9BACXX120123.3.TTCGCTGA.C829.TARGET-30-PASFNY-01A-01D.3.bam	SRR635159	@dbgap@:reads/SRP012002/SRS380085/SRX210969/SRR635159/SRR635159.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PASFNY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFNY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFNY-10A-01D	DNA	EFO	SRS379871		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASFNY-10A-01D Catch-131454 library	PAIRED	GENOMIC	WXS	Hybrid Selection	160	63.9222294117647	Catch-131454	SRX210533	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASFNY-10A-01D Catch-131454 run	sequencing assay	EFO	151	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C9BACXX120123.7.TCGCCTTG.C829.TARGET-30-PASFNY-10A-01D.3.bam	SRR633395	@dbgap@:reads/SRP012002/SRS379871/SRX210533/SRR633395/SRR633395.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASFNY.seg.txt	3
TARGET-30-PASFNY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASFNY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASFNY-10A-01D	DNA	EFO	SRS379871		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASFNY-10A-01D Catch-131454 library	PAIRED	GENOMIC	WXS	Hybrid Selection	160	63.9222294117647	Catch-131454	SRX210533	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASFNY-10A-01D Catch-131454 run	sequencing assay	EFO	151	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C9BACXX120123.7.TCGCCTTG.C829.TARGET-30-PASFNY-10A-01D.3.bam	SRR633395	@dbgap@:reads/SRP012002/SRS379871/SRX210533/SRR633395/SRR633395.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PASGAP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGAP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGAP-01A-01D	DNA	EFO	SRS379872		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASGAP-01A-01D Catch-131431 library	PAIRED	GENOMIC	WXS	Hybrid Selection	156	63.5540323529412	Catch-131431	SRX210542	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-25	TARGET-30-PASGAP-01A-01D Catch-131431 run	sequencing assay	EFO	151	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0CL6ACXX120125.8.CATAGCGA.C829.TARGET-30-PASGAP-01A-01D.3.bam	SRR632800	@dbgap@:reads/SRP012002/SRS379872/SRX210542/SRR632800/SRR632800.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASGAP.seg.txt	3
TARGET-30-PASGAP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGAP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGAP-01A-01D	DNA	EFO	SRS379872		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASGAP-01A-01D Catch-131431 library	PAIRED	GENOMIC	WXS	Hybrid Selection	156	63.5540323529412	Catch-131431	SRX210542	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-25	TARGET-30-PASGAP-01A-01D Catch-131431 run	sequencing assay	EFO	151	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0CL6ACXX120125.8.CATAGCGA.C829.TARGET-30-PASGAP-01A-01D.3.bam	SRR632800	@dbgap@:reads/SRP012002/SRS379872/SRX210542/SRR632800/SRR632800.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PASGAP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGAP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGAP-10A-01D	DNA	EFO	SRS379876		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASGAP-10A-01D Catch-131420 library	PAIRED	GENOMIC	WXS	Hybrid Selection	156	66.7918064705882	Catch-131420	SRX210565	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASGAP-10A-01D Catch-131420 run	sequencing assay	EFO	151	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C9BACXX120123.3.TCTGGCGA.C829.TARGET-30-PASGAP-10A-01D.3.bam	SRR632877	@dbgap@:reads/SRP012002/SRS379876/SRX210565/SRR632877/SRR632877.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASGAP.seg.txt	3
TARGET-30-PASGAP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGAP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGAP-10A-01D	DNA	EFO	SRS379876		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASGAP-10A-01D Catch-131420 library	PAIRED	GENOMIC	WXS	Hybrid Selection	156	66.7918064705882	Catch-131420	SRX210565	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASGAP-10A-01D Catch-131420 run	sequencing assay	EFO	151	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C9BACXX120123.3.TCTGGCGA.C829.TARGET-30-PASGAP-10A-01D.3.bam	SRR632877	@dbgap@:reads/SRP012002/SRS379876/SRX210565/SRR632877/SRR632877.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PASGUT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGUT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGUT-01A-01D	DNA	EFO	SRS375184		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASGUT-01A-01D Catch-131479 library	PAIRED	GENOMIC	WXS	Hybrid Selection	157	64.8805029411765	Catch-131479	SRX211203	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-20	TARGET-30-PASGUT-01A-01D Catch-131479 run	sequencing assay	EFO	151	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0DP7ACXX120120.4.GACCAGGA.C829.TARGET-30-PASGUT-01A-01D.3.bam	SRR636342	@dbgap@:reads/SRP012002/SRS375184/SRX211203/SRR636342/SRR636342.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASGUT.seg.txt	3
TARGET-30-PASGUT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGUT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGUT-01A-01D	DNA	EFO	SRS375184		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASGUT-01A-01D Catch-131479 library	PAIRED	GENOMIC	WXS	Hybrid Selection	157	64.8805029411765	Catch-131479	SRX211203	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-20	TARGET-30-PASGUT-01A-01D Catch-131479 run	sequencing assay	EFO	151	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0DP7ACXX120120.4.GACCAGGA.C829.TARGET-30-PASGUT-01A-01D.3.bam	SRR636342	@dbgap@:reads/SRP012002/SRS375184/SRX211203/SRR636342/SRR636342.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PASGUT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGUT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGUT-10A-01D	DNA	EFO	SRS375183		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASGUT-10A-01D Catch-131446 library	PAIRED	GENOMIC	WXS	Hybrid Selection	154	62.0176123529412	Catch-131446	SRX210960	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-25	TARGET-30-PASGUT-10A-01D Catch-131446 run	sequencing assay	EFO	151	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0CL6ACXX120125.6.TAAGCACA.C829.TARGET-30-PASGUT-10A-01D.3.bam	SRR635176	@dbgap@:reads/SRP012002/SRS375183/SRX210960/SRR635176/SRR635176.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASGUT.seg.txt	3
TARGET-30-PASGUT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASGUT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASGUT-10A-01D	DNA	EFO	SRS375183		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASGUT-10A-01D Catch-131446 library	PAIRED	GENOMIC	WXS	Hybrid Selection	154	62.0176123529412	Catch-131446	SRX210960	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-25	TARGET-30-PASGUT-10A-01D Catch-131446 run	sequencing assay	EFO	151	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0CL6ACXX120125.6.TAAGCACA.C829.TARGET-30-PASGUT-10A-01D.3.bam	SRR635176	@dbgap@:reads/SRP012002/SRS375183/SRX210960/SRR635176/SRR635176.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PASKFV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASKFV-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASKFV-01A-01D	DNA	EFO	SRS380077		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASKFV-01A-01D Catch-131490 library	PAIRED	GENOMIC	WXS	Hybrid Selection	158	67.1306782352941	Catch-131490	SRX210924	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-25	TARGET-30-PASKFV-01A-01D Catch-131490 run	sequencing assay	EFO	151	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0CL6ACXX120125.8.TATCCAGG.C829.TARGET-30-PASKFV-01A-01D.3.bam	SRR634863	@dbgap@:reads/SRP012002/SRS380077/SRX210924/SRR634863/SRR634863.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASKFV.seg.txt	3
TARGET-30-PASKFV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASKFV-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASKFV-01A-01D	DNA	EFO	SRS380077		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASKFV-01A-01D Catch-131490 library	PAIRED	GENOMIC	WXS	Hybrid Selection	158	67.1306782352941	Catch-131490	SRX210924	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-25	TARGET-30-PASKFV-01A-01D Catch-131490 run	sequencing assay	EFO	151	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0CL6ACXX120125.8.TATCCAGG.C829.TARGET-30-PASKFV-01A-01D.3.bam	SRR634863	@dbgap@:reads/SRP012002/SRS380077/SRX210924/SRR634863/SRR634863.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PASKFV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASKFV-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASKFV-10A-01D	DNA	EFO	SRS380187		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASKFV-10A-01D Catch-131468 library	PAIRED	GENOMIC	WXS	Hybrid Selection	152	62.8749588235294	Catch-131468	SRX211126	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-25	TARGET-30-PASKFV-10A-01D Catch-131468 run	sequencing assay	EFO	151	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0CL6ACXX120125.3.CAGCGGTA.C829.TARGET-30-PASKFV-10A-01D.3.bam	SRR645961	@dbgap@:reads/SRP012002/SRS380187/SRX211126/SRR645961/SRR645961.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASKFV.seg.txt	3
TARGET-30-PASKFV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASKFV-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASKFV-10A-01D	DNA	EFO	SRS380187		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASKFV-10A-01D Catch-131468 library	PAIRED	GENOMIC	WXS	Hybrid Selection	152	62.8749588235294	Catch-131468	SRX211126	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-25	TARGET-30-PASKFV-10A-01D Catch-131468 run	sequencing assay	EFO	151	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0CL6ACXX120125.3.CAGCGGTA.C829.TARGET-30-PASKFV-10A-01D.3.bam	SRR645961	@dbgap@:reads/SRP012002/SRS380187/SRX211126/SRR645961/SRR645961.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PASKTB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASKTB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASKTB-01A-01D	DNA	EFO	SRS380207		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASKTB-01A-01D Catch-131142 library	PAIRED	GENOMIC	WXS	Hybrid Selection	158	63.5261468181818	Catch-131142	SRX211210	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PASKTB-01A-01D Catch-131142 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DF6ACXX120206.1.TGCTCGAC.C829.TARGET-30-PASKTB-01A-01D.1.bam	SRR636181	@dbgap@:reads/SRP012002/SRS380207/SRX211210/SRR636181/SRR636181.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASKTB.seg.txt	3
TARGET-30-PASKTB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASKTB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASKTB-10A-01D	DNA	EFO	SRS380203		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASKTB-10A-01D Catch-131185 library	PAIRED	GENOMIC	WXS	Hybrid Selection	159	64.8125645454545	Catch-131185	SRX211187	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PASKTB-10A-01D Catch-131185 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DF6ACXX120206.2.GCCTAGCC.C829.TARGET-30-PASKTB-10A-01D.1.bam	SRR645885	@dbgap@:reads/SRP012002/SRS380203/SRX211187/SRR645885/SRR645885.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASKTB.seg.txt	3
TARGET-30-PASMJG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASMJG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASMJG-01A-01D	DNA	EFO	SRS379844		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASMJG-01A-01D Catch-131457 library	PAIRED	GENOMIC	WXS	Hybrid Selection	160	65.455864117647	Catch-131457	SRX210271	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-25	TARGET-30-PASMJG-01A-01D Catch-131457 run	sequencing assay	EFO	151	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0CL6ACXX120125.3.AATGTTCT.C829.TARGET-30-PASMJG-01A-01D.3.bam	SRR632600	@dbgap@:reads/SRP012002/SRS379844/SRX210271/SRR632600/SRR632600.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASMJG.seg.txt	3
TARGET-30-PASMJG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASMJG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASMJG-10A-01D	DNA	EFO	SRS379645		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASMJG-10A-01D Catch-131408 library	PAIRED	GENOMIC	WXS	Hybrid Selection	155	64.7954582352941	Catch-131408	SRX210040	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-25	TARGET-30-PASMJG-10A-01D Catch-131408 run	sequencing assay	EFO	151	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0CL6ACXX120125.6.GCACACGA.C829.TARGET-30-PASMJG-10A-01D.3.bam	SRR633196	@dbgap@:reads/SRP012002/SRS379645/SRX210040/SRR633196/SRR633196.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASMJG.seg.txt	3
TARGET-30-PASMNT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASMNT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASMNT-01A-01D	DNA	EFO	SRS380037		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASMNT-01A-01D Catch-131443 library	PAIRED	GENOMIC	WXS	Hybrid Selection	153	66.3170341176471	Catch-131443	SRX210774	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-25	TARGET-30-PASMNT-01A-01D Catch-131443 run	sequencing assay	EFO	151	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0CL6ACXX120125.7.CCTATGCC.C829.TARGET-30-PASMNT-01A-01D.3.bam	SRR634349	@dbgap@:reads/SRP012002/SRS380037/SRX210774/SRR634349/SRR634349.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASMNT.seg.txt	3
TARGET-30-PASMNT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASMNT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASMNT-01A-01D	DNA	EFO	SRS380037		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASMNT-01A-01D Catch-131443 library	PAIRED	GENOMIC	WXS	Hybrid Selection	153	66.3170341176471	Catch-131443	SRX210774	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-25	TARGET-30-PASMNT-01A-01D Catch-131443 run	sequencing assay	EFO	151	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0CL6ACXX120125.7.CCTATGCC.C829.TARGET-30-PASMNT-01A-01D.3.bam	SRR634349	@dbgap@:reads/SRP012002/SRS380037/SRX210774/SRR634349/SRR634349.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PASMNT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASMNT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASMNT-10A-01D	DNA	EFO	SRS379846		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASMNT-10A-01D Catch-131488 library	PAIRED	GENOMIC	WXS	Hybrid Selection	163	71.2922088235294	Catch-131488	SRX210281	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASMNT-10A-01D Catch-131488 run	sequencing assay	EFO	151	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C9BACXX120123.8.CCAGAGCT.C829.TARGET-30-PASMNT-10A-01D.3.bam	SRR632640	@dbgap@:reads/SRP012002/SRS379846/SRX210281/SRR632640/SRR632640.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASMNT.seg.txt	3
TARGET-30-PASMNT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASMNT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASMNT-10A-01D	DNA	EFO	SRS379846		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASMNT-10A-01D Catch-131488 library	PAIRED	GENOMIC	WXS	Hybrid Selection	163	71.2922088235294	Catch-131488	SRX210281	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASMNT-10A-01D Catch-131488 run	sequencing assay	EFO	151	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0C9BACXX120123.8.CCAGAGCT.C829.TARGET-30-PASMNT-10A-01D.3.bam	SRR632640	@dbgap@:reads/SRP012002/SRS379846/SRX210281/SRR632640/SRR632640.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PASNEF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNEF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNEF-01A-01D	DNA	EFO	SRS380875		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASNEF-01A-01D Catch-130985 library	PAIRED	GENOMIC	WXS	Hybrid Selection	153	66.7904277777778	Catch-130985	SRX211912	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-25	TARGET-30-PASNEF-01A-01D Catch-130985 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0JTGACXX120125.4.TTAATCAG.C829.TARGET-30-PASNEF-01A-01D.1.bam	SRR637823	@dbgap@:reads/SRP012002/SRS380875/SRX211912/SRR637823/SRR637823.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASNEF.seg.txt	3
TARGET-30-PASNEF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNEF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNEF-01A-01D	DNA	EFO	SRS380875		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASNEF-01A-01D Catch-130985 library	PAIRED	GENOMIC	WXS	Hybrid Selection	153	66.7904277777778	Catch-130985	SRX211912	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-25	TARGET-30-PASNEF-01A-01D Catch-130985 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0JTGACXX120125.4.TTAATCAG.C829.TARGET-30-PASNEF-01A-01D.1.bam	SRR637823	@dbgap@:reads/SRP012002/SRS380875/SRX211912/SRR637823/SRR637823.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PASNEF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNEF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNEF-10A-01D	DNA	EFO	SRS380855		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASNEF-10A-01D Catch-130973 library	PAIRED	GENOMIC	WXS	Hybrid Selection	148	90.8310355555556	Catch-130973	SRX211823	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-25	TARGET-30-PASNEF-10A-01D Catch-130973 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0JTGACXX120125.4.GCAGCCGT.C829.TARGET-30-PASNEF-10A-01D.1.bam	SRR638459	@dbgap@:reads/SRP012002/SRS380855/SRX211823/SRR638459/SRR638459.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASNEF.seg.txt	3
TARGET-30-PASNEF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNEF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNEF-10A-01D	DNA	EFO	SRS380855		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASNEF-10A-01D Catch-130973 library	PAIRED	GENOMIC	WXS	Hybrid Selection	148	90.8310355555556	Catch-130973	SRX211823	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-25	TARGET-30-PASNEF-10A-01D Catch-130973 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0JTGACXX120125.4.GCAGCCGT.C829.TARGET-30-PASNEF-10A-01D.1.bam	SRR638459	@dbgap@:reads/SRP012002/SRS380855/SRX211823/SRR638459/SRR638459.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PASNZU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNZU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNZU-01A-01D	DNA	EFO	SRS375011		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASNZU-01A-01D Catch-131009 library	PAIRED	GENOMIC	WXS	Hybrid Selection	152	61.8597	Catch-131009	SRX211900	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASNZU-01A-01D Catch-131009 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0703ACXX120123.1.CTGTGGCG.C829.TARGET-30-PASNZU-01A-01D.1.bam	SRR637499	@dbgap@:reads/SRP012002/SRS375011/SRX211900/SRR637499/SRR637499.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASNZU.seg.txt	3
TARGET-30-PASNZU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNZU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNZU-01A-01D	DNA	EFO	SRS375011		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASNZU-01A-01D Catch-131009 library	PAIRED	GENOMIC	WXS	Hybrid Selection	152	61.8597	Catch-131009	SRX211900	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASNZU-01A-01D Catch-131009 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0703ACXX120123.1.CTGTGGCG.C829.TARGET-30-PASNZU-01A-01D.1.bam	SRR637499	@dbgap@:reads/SRP012002/SRS375011/SRX211900/SRR637499/SRR637499.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PASNZU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNZU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNZU-10A-01D	DNA	EFO	SRS375010		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASNZU-10A-01D Catch-130961 library	PAIRED	GENOMIC	WXS	Hybrid Selection	149	60.0595844444444	Catch-130961	SRX211739	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-25	TARGET-30-PASNZU-10A-01D Catch-130961 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0JTGACXX120125.4.CTGCGGAT.C829.TARGET-30-PASNZU-10A-01D.1.bam	SRR637643	@dbgap@:reads/SRP012002/SRS375010/SRX211739/SRR637643/SRR637643.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASNZU.seg.txt	3
TARGET-30-PASNZU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASNZU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASNZU-10A-01D	DNA	EFO	SRS375010		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASNZU-10A-01D Catch-130961 library	PAIRED	GENOMIC	WXS	Hybrid Selection	149	60.0595844444444	Catch-130961	SRX211739	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-25	TARGET-30-PASNZU-10A-01D Catch-130961 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0JTGACXX120125.4.CTGCGGAT.C829.TARGET-30-PASNZU-10A-01D.1.bam	SRR637643	@dbgap@:reads/SRP012002/SRS375010/SRX211739/SRR637643/SRR637643.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PASPER	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASPER-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASPER-01A-01D	DNA	EFO	SRS375180		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASPER-01A-01D Catch-131021 library	PAIRED	GENOMIC	WXS	Hybrid Selection	156	74.1814572222222	Catch-131021	SRX211747	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-25	TARGET-30-PASPER-01A-01D Catch-131021 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0JTGACXX120125.4.GCCGCAAC.C829.TARGET-30-PASPER-01A-01D.1.bam	SRR637355	@dbgap@:reads/SRP012002/SRS375180/SRX211747/SRR637355/SRR637355.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASPER.seg.txt	3
TARGET-30-PASPER	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASPER-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASPER-01A-01D	DNA	EFO	SRS375180		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASPER-01A-01D Catch-131021 library	PAIRED	GENOMIC	WXS	Hybrid Selection	156	74.1814572222222	Catch-131021	SRX211747	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-25	TARGET-30-PASPER-01A-01D Catch-131021 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0JTGACXX120125.4.GCCGCAAC.C829.TARGET-30-PASPER-01A-01D.1.bam	SRR637355	@dbgap@:reads/SRP012002/SRS375180/SRX211747/SRR637355/SRR637355.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PASPER	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASPER-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASPER-10A-01D	DNA	EFO	SRS375179		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASPER-10A-01D Catch-130976 library	PAIRED	GENOMIC	WXS	Hybrid Selection	156	58.4198272222222	Catch-130976	SRX211768	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASPER-10A-01D Catch-130976 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079CACXX120123.8.CAGGAGCC.C829.TARGET-30-PASPER-10A-01D.1.bam	SRR637841	@dbgap@:reads/SRP012002/SRS375179/SRX211768/SRR637841/SRR637841.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASPER.seg.txt	3
TARGET-30-PASPER	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASPER-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASPER-10A-01D	DNA	EFO	SRS375179		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASPER-10A-01D Catch-130976 library	PAIRED	GENOMIC	WXS	Hybrid Selection	156	58.4198272222222	Catch-130976	SRX211768	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASPER-10A-01D Catch-130976 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079CACXX120123.8.CAGGAGCC.C829.TARGET-30-PASPER-10A-01D.1.bam	SRR637841	@dbgap@:reads/SRP012002/SRS375179/SRX211768/SRR637841/SRR637841.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PASRFS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASRFS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASRFS-01A-01D	DNA	EFO	SRS375178		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASRFS-01A-01D Catch-130997 library	PAIRED	GENOMIC	WXS	Hybrid Selection	154	64.280515	Catch-130997	SRX211973	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASRFS-01A-01D Catch-130997 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0703ACXX120123.2.AGGTGCGA.C829.TARGET-30-PASRFS-01A-01D.1.bam	SRR638115	@dbgap@:reads/SRP012002/SRS375178/SRX211973/SRR638115/SRR638115.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASRFS.seg.txt	3
TARGET-30-PASRFS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASRFS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASRFS-01A-01D	DNA	EFO	SRS375178		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASRFS-01A-01D Catch-130997 library	PAIRED	GENOMIC	WXS	Hybrid Selection	154	64.280515	Catch-130997	SRX211973	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASRFS-01A-01D Catch-130997 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0703ACXX120123.2.AGGTGCGA.C829.TARGET-30-PASRFS-01A-01D.1.bam	SRR638115	@dbgap@:reads/SRP012002/SRS375178/SRX211973/SRR638115/SRR638115.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PASRFS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASRFS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASRFS-10A-01D	DNA	EFO	SRS375177		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASRFS-10A-01D Catch-130988 library	PAIRED	GENOMIC	WXS	Hybrid Selection	150	58.1128633333333	Catch-130988	SRX211743	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-25	TARGET-30-PASRFS-10A-01D Catch-130988 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0JTGACXX120125.4.TGTCGGAT.C829.TARGET-30-PASRFS-10A-01D.1.bam	SRR637033	@dbgap@:reads/SRP012002/SRS375177/SRX211743/SRR637033/SRR637033.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASRFS.seg.txt	3
TARGET-30-PASRFS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASRFS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASRFS-10A-01D	DNA	EFO	SRS375177		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASRFS-10A-01D Catch-130988 library	PAIRED	GENOMIC	WXS	Hybrid Selection	150	58.1128633333333	Catch-130988	SRX211743	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-25	TARGET-30-PASRFS-10A-01D Catch-130988 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0JTGACXX120125.4.TGTCGGAT.C829.TARGET-30-PASRFS-10A-01D.1.bam	SRR637033	@dbgap@:reads/SRP012002/SRS375177/SRX211743/SRR637033/SRR637033.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PASSRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRN-01A-01D	DNA	EFO	SRS380837		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASSRN-01A-01D Catch-131011 library	PAIRED	GENOMIC	WXS	Hybrid Selection	153	59.8575716666667	Catch-131011	SRX211740	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASSRN-01A-01D Catch-131011 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079CACXX120123.4.TCGGAATG.C829.TARGET-30-PASSRN-01A-01D.1.bam	SRR637661	@dbgap@:reads/SRP012002/SRS380837/SRX211740/SRR637661/SRR637661.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASSRN.seg.txt	3
TARGET-30-PASSRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRN-01A-01D	DNA	EFO	SRS380837		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASSRN-01A-01D Catch-131011 library	PAIRED	GENOMIC	WXS	Hybrid Selection	153	59.8575716666667	Catch-131011	SRX211740	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASSRN-01A-01D Catch-131011 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079CACXX120123.4.TCGGAATG.C829.TARGET-30-PASSRN-01A-01D.1.bam	SRR637661	@dbgap@:reads/SRP012002/SRS380837/SRX211740/SRR637661/SRR637661.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PASSRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRN-10A-01D	DNA	EFO	SRS380844		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASSRN-10A-01D Catch-130972 library	PAIRED	GENOMIC	WXS	Hybrid Selection	146	59.3891061111111	Catch-130972	SRX211784	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASSRN-10A-01D Catch-130972 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079CACXX120123.6.GACCTAAC.C829.TARGET-30-PASSRN-10A-01D.1.bam	SRR637607	@dbgap@:reads/SRP012002/SRS380844/SRX211784/SRR637607/SRR637607.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASSRN.seg.txt	3
TARGET-30-PASSRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRN-10A-01D	DNA	EFO	SRS380844		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASSRN-10A-01D Catch-130972 library	PAIRED	GENOMIC	WXS	Hybrid Selection	146	59.3891061111111	Catch-130972	SRX211784	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASSRN-10A-01D Catch-130972 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079CACXX120123.6.GACCTAAC.C829.TARGET-30-PASSRN-10A-01D.1.bam	SRR637607	@dbgap@:reads/SRP012002/SRS380844/SRX211784/SRR637607/SRR637607.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PASSRS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRS-01A-01D	DNA	EFO	SRS375175		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASSRS-01A-01D Catch-131024 library	PAIRED	GENOMIC	WXS	Hybrid Selection	159	64.7613711111111	Catch-131024	SRX211731	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASSRS-01A-01D Catch-131024 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0703ACXX120123.8.TACTTAGC.C829.TARGET-30-PASSRS-01A-01D.1.bam	SRR637589	@dbgap@:reads/SRP012002/SRS375175/SRX211731/SRR637589/SRR637589.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASSRS.seg.txt	3
TARGET-30-PASSRS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRS-01A-01D	DNA	EFO	SRS375175		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASSRS-01A-01D Catch-131024 library	PAIRED	GENOMIC	WXS	Hybrid Selection	159	64.7613711111111	Catch-131024	SRX211731	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASSRS-01A-01D Catch-131024 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0703ACXX120123.8.TACTTAGC.C829.TARGET-30-PASSRS-01A-01D.1.bam	SRR637589	@dbgap@:reads/SRP012002/SRS375175/SRX211731/SRR637589/SRR637589.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PASSRS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRS-10A-01D	DNA	EFO	SRS375176		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASSRS-10A-01D Catch-130991 library	PAIRED	GENOMIC	WXS	Hybrid Selection	154	62.7595288888889	Catch-130991	SRX211918	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASSRS-10A-01D Catch-130991 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079CACXX120123.8.TCTCGGTC.C829.TARGET-30-PASSRS-10A-01D.1.bam	SRR638576	@dbgap@:reads/SRP012002/SRS375176/SRX211918/SRR638576/SRR638576.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASSRS.seg.txt	3
TARGET-30-PASSRS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSRS-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSRS-10A-01D	DNA	EFO	SRS375176		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASSRS-10A-01D Catch-130991 library	PAIRED	GENOMIC	WXS	Hybrid Selection	154	62.7595288888889	Catch-130991	SRX211918	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASSRS-10A-01D Catch-130991 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079CACXX120123.8.TCTCGGTC.C829.TARGET-30-PASSRS-10A-01D.1.bam	SRR638576	@dbgap@:reads/SRP012002/SRS375176/SRX211918/SRR638576/SRR638576.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PASSWB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSWB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSWB-01A-01D	DNA	EFO	SRS380863		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASSWB-01A-01D Catch-130984 library	PAIRED	GENOMIC	WXS	Hybrid Selection	135	57.7471455555556	Catch-130984	SRX211855	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASSWB-01A-01D Catch-130984 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0703ACXX120123.1.TGCAAGTA.C829.TARGET-30-PASSWB-01A-01D.1.bam	SRR637301	@dbgap@:reads/SRP012002/SRS380863/SRX211855/SRR637301/SRR637301.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASSWB.seg.txt	3
TARGET-30-PASSWB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSWB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSWB-01A-01D	DNA	EFO	SRS380863		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASSWB-01A-01D Catch-130984 library	PAIRED	GENOMIC	WXS	Hybrid Selection	135	57.7471455555556	Catch-130984	SRX211855	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASSWB-01A-01D Catch-130984 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0703ACXX120123.1.TGCAAGTA.C829.TARGET-30-PASSWB-01A-01D.1.bam	SRR637301	@dbgap@:reads/SRP012002/SRS380863/SRX211855/SRR637301/SRR637301.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PASSWB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSWB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSWB-10A-01D	DNA	EFO	SRS380857		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASSWB-10A-01D Catch-130996 library	PAIRED	GENOMIC	WXS	Hybrid Selection	152	57.3991372222222	Catch-130996	SRX211827	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASSWB-10A-01D Catch-130996 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079CACXX120123.3.AGCATGGA.C829.TARGET-30-PASSWB-10A-01D.1.bam	SRR637193	@dbgap@:reads/SRP012002/SRS380857/SRX211827/SRR637193/SRR637193.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASSWB.seg.txt	3
TARGET-30-PASSWB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASSWB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASSWB-10A-01D	DNA	EFO	SRS380857		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASSWB-10A-01D Catch-130996 library	PAIRED	GENOMIC	WXS	Hybrid Selection	152	57.3991372222222	Catch-130996	SRX211827	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASSWB-10A-01D Catch-130996 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079CACXX120123.3.AGCATGGA.C829.TARGET-30-PASSWB-10A-01D.1.bam	SRR637193	@dbgap@:reads/SRP012002/SRS380857/SRX211827/SRR637193/SRR637193.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PASTCN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTCN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTCN-01A-01D	DNA	EFO	SRS375186		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASTCN-01A-01D Catch-130980 library	PAIRED	GENOMIC	WXS	Hybrid Selection	141	58.4487977777778	Catch-130980	SRX211946	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASTCN-01A-01D Catch-130980 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0703ACXX120123.6.TAAGCACA.C829.TARGET-30-PASTCN-01A-01D.1.bam	SRR638633	@dbgap@:reads/SRP012002/SRS375186/SRX211946/SRR638633/SRR638633.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASTCN.seg.txt	3
TARGET-30-PASTCN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTCN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTCN-01A-01D	DNA	EFO	SRS375186		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASTCN-01A-01D Catch-130980 library	PAIRED	GENOMIC	WXS	Hybrid Selection	141	58.4487977777778	Catch-130980	SRX211946	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASTCN-01A-01D Catch-130980 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0703ACXX120123.6.TAAGCACA.C829.TARGET-30-PASTCN-01A-01D.1.bam	SRR638633	@dbgap@:reads/SRP012002/SRS375186/SRX211946/SRR638633/SRR638633.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PASTCN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTCN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTCN-10A-01D	DNA	EFO	SRS375185		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASTCN-10A-01D Catch-130959 library	PAIRED	GENOMIC	WXS	Hybrid Selection	156	62.4700255555556	Catch-130959	SRX211794	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASTCN-10A-01D Catch-130959 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079CACXX120123.7.ATTCCTCT.C829.TARGET-30-PASTCN-10A-01D.1.bam	SRR637265	@dbgap@:reads/SRP012002/SRS375185/SRX211794/SRR637265/SRR637265.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASTCN.seg.txt	3
TARGET-30-PASTCN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTCN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTCN-10A-01D	DNA	EFO	SRS375185		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASTCN-10A-01D Catch-130959 library	PAIRED	GENOMIC	WXS	Hybrid Selection	156	62.4700255555556	Catch-130959	SRX211794	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASTCN-10A-01D Catch-130959 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079CACXX120123.7.ATTCCTCT.C829.TARGET-30-PASTCN-10A-01D.1.bam	SRR637265	@dbgap@:reads/SRP012002/SRS375185/SRX211794/SRR637265/SRR637265.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PASTKC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTKC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTKC-01A-01D	DNA	EFO	SRS380879		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASTKC-01A-01D Catch-130963 library	PAIRED	GENOMIC	WXS	Hybrid Selection	157	70.5452077777778	Catch-130963	SRX211926	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASTKC-01A-01D Catch-130963 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0703ACXX120123.1.GTATAACA.C829.TARGET-30-PASTKC-01A-01D.1.bam	SRR638151	@dbgap@:reads/SRP012002/SRS380879/SRX211926/SRR638151/SRR638151.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASTKC.seg.txt	3
TARGET-30-PASTKC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTKC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTKC-01A-01D	DNA	EFO	SRS380879		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASTKC-01A-01D Catch-130963 library	PAIRED	GENOMIC	WXS	Hybrid Selection	157	70.5452077777778	Catch-130963	SRX211926	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASTKC-01A-01D Catch-130963 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0703ACXX120123.1.GTATAACA.C829.TARGET-30-PASTKC-01A-01D.1.bam	SRR638151	@dbgap@:reads/SRP012002/SRS380879/SRX211926/SRR638151/SRR638151.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PASTKC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTKC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTKC-10A-01D	DNA	EFO	SRS380856		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASTKC-10A-01D Catch-130945 library	PAIRED	GENOMIC	WXS	Hybrid Selection	154	59.0388327777778	Catch-130945	SRX211826	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASTKC-10A-01D Catch-130945 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0703ACXX120123.8.ACAGGTAT.C829.TARGET-30-PASTKC-10A-01D.1.bam	SRR637175	@dbgap@:reads/SRP012002/SRS380856/SRX211826/SRR637175/SRR637175.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASTKC.seg.txt	3
TARGET-30-PASTKC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTKC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTKC-10A-01D	DNA	EFO	SRS380856		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASTKC-10A-01D Catch-130945 library	PAIRED	GENOMIC	WXS	Hybrid Selection	154	59.0388327777778	Catch-130945	SRX211826	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASTKC-10A-01D Catch-130945 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0703ACXX120123.8.ACAGGTAT.C829.TARGET-30-PASTKC-10A-01D.1.bam	SRR637175	@dbgap@:reads/SRP012002/SRS380856/SRX211826/SRR637175/SRR637175.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PASTKW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTKW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTKW-01A-01D	DNA	EFO	SRS380842		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASTKW-01A-01D Catch-130993 library	PAIRED	GENOMIC	WXS	Hybrid Selection	153	61.3702394444444	Catch-130993	SRX211777	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASTKW-01A-01D Catch-130993 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079CACXX120123.2.ACTAAGAC.C829.TARGET-30-PASTKW-01A-01D.1.bam	SRR637949	@dbgap@:reads/SRP012002/SRS380842/SRX211777/SRR637949/SRR637949.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASTKW.seg.txt	3
TARGET-30-PASTKW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTKW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTKW-01A-01D	DNA	EFO	SRS380842		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASTKW-01A-01D Catch-130993 library	PAIRED	GENOMIC	WXS	Hybrid Selection	153	61.3702394444444	Catch-130993	SRX211777	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASTKW-01A-01D Catch-130993 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079CACXX120123.2.ACTAAGAC.C829.TARGET-30-PASTKW-01A-01D.1.bam	SRR637949	@dbgap@:reads/SRP012002/SRS380842/SRX211777/SRR637949/SRR637949.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PASTKW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTKW-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTKW-10A-01D	DNA	EFO	SRS380845		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASTKW-10A-01D Catch-130998 library	PAIRED	GENOMIC	WXS	Hybrid Selection	159	69.2547561111111	Catch-130998	SRX211790	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASTKW-10A-01D Catch-130998 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0703ACXX120123.7.AGTTGCTT.C829.TARGET-30-PASTKW-10A-01D.1.bam	SRR638477	@dbgap@:reads/SRP012002/SRS380845/SRX211790/SRR638477/SRR638477.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASTKW.seg.txt	3
TARGET-30-PASTKW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTKW-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTKW-10A-01D	DNA	EFO	SRS380845		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASTKW-10A-01D Catch-130998 library	PAIRED	GENOMIC	WXS	Hybrid Selection	159	69.2547561111111	Catch-130998	SRX211790	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASTKW-10A-01D Catch-130998 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0703ACXX120123.7.AGTTGCTT.C829.TARGET-30-PASTKW-10A-01D.1.bam	SRR638477	@dbgap@:reads/SRP012002/SRS380845/SRX211790/SRR638477/SRR638477.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PASTXR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTXR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTXR-01A-01D	DNA	EFO	SRS380867		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASTXR-01A-01D Catch-130999 library	PAIRED	GENOMIC	WXS	Hybrid Selection	157	62.1771505555556	Catch-130999	SRX211882	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-25	TARGET-30-PASTXR-01A-01D Catch-130999 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0JTGACXX120125.8.CACATCCT.C829.TARGET-30-PASTXR-01A-01D.1.bam	SRR638079	@dbgap@:reads/SRP012002/SRS380867/SRX211882/SRR638079/SRR638079.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASTXR.seg.txt	3
TARGET-30-PASTXR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTXR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTXR-01A-01D	DNA	EFO	SRS380867		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASTXR-01A-01D Catch-130999 library	PAIRED	GENOMIC	WXS	Hybrid Selection	157	62.1771505555556	Catch-130999	SRX211882	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-25	TARGET-30-PASTXR-01A-01D Catch-130999 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0JTGACXX120125.8.CACATCCT.C829.TARGET-30-PASTXR-01A-01D.1.bam	SRR638079	@dbgap@:reads/SRP012002/SRS380867/SRX211882/SRR638079/SRR638079.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PASTXR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTXR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTXR-10A-01D	DNA	EFO	SRS380885		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASTXR-10A-01D Catch-131015 library	PAIRED	GENOMIC	WXS	Hybrid Selection	150	59.5233761111111	Catch-131015	SRX211955	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASTXR-10A-01D Catch-131015 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079CACXX120123.5.GAACCTAG.C829.TARGET-30-PASTXR-10A-01D.1.bam	SRR638223	@dbgap@:reads/SRP012002/SRS380885/SRX211955/SRR638223/SRR638223.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASTXR.seg.txt	3
TARGET-30-PASTXR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASTXR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASTXR-10A-01D	DNA	EFO	SRS380885		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASTXR-10A-01D Catch-131015 library	PAIRED	GENOMIC	WXS	Hybrid Selection	150	59.5233761111111	Catch-131015	SRX211955	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASTXR-10A-01D Catch-131015 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079CACXX120123.5.GAACCTAG.C829.TARGET-30-PASTXR-10A-01D.1.bam	SRR638223	@dbgap@:reads/SRP012002/SRS380885/SRX211955/SRR638223/SRR638223.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PASUCB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUCB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUCB-01A-01D	DNA	EFO	SRS375435		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASUCB-01A-01D Catch-130995 library	PAIRED	GENOMIC	WXS	Hybrid Selection	149	59.3788633333333	Catch-130995	SRX211968	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-25	TARGET-30-PASUCB-01A-01D Catch-130995 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0JTGACXX120125.8.ACAGTTGA.C829.TARGET-30-PASUCB-01A-01D.1.bam	SRR638295	@dbgap@:reads/SRP012002/SRS375435/SRX211968/SRR638295/SRR638295.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASUCB.seg.txt	3
TARGET-30-PASUCB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUCB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUCB-01A-01D	DNA	EFO	SRS375435		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASUCB-01A-01D Catch-130995 library	PAIRED	GENOMIC	WXS	Hybrid Selection	149	59.3788633333333	Catch-130995	SRX211968	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-25	TARGET-30-PASUCB-01A-01D Catch-130995 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0JTGACXX120125.8.ACAGTTGA.C829.TARGET-30-PASUCB-01A-01D.1.bam	SRR638295	@dbgap@:reads/SRP012002/SRS375435/SRX211968/SRR638295/SRR638295.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PASUCB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUCB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUCB-10A-01D	DNA	EFO	SRS375434		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASUCB-10A-01D Catch-131012 library	PAIRED	GENOMIC	WXS	Hybrid Selection	159	69.0813366666667	Catch-131012	SRX211770	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-25	TARGET-30-PASUCB-10A-01D Catch-131012 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0JTGACXX120125.4.CCTACCAT.C829.TARGET-30-PASUCB-10A-01D.1.bam	SRR637859	@dbgap@:reads/SRP012002/SRS375434/SRX211770/SRR637859/SRR637859.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASUCB.seg.txt	3
TARGET-30-PASUCB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUCB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUCB-10A-01D	DNA	EFO	SRS375434		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASUCB-10A-01D Catch-131012 library	PAIRED	GENOMIC	WXS	Hybrid Selection	159	69.0813366666667	Catch-131012	SRX211770	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-25	TARGET-30-PASUCB-10A-01D Catch-131012 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0JTGACXX120125.4.CCTACCAT.C829.TARGET-30-PASUCB-10A-01D.1.bam	SRR637859	@dbgap@:reads/SRP012002/SRS375434/SRX211770/SRR637859/SRR637859.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PASUYG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUYG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUYG-01A-01D	DNA	EFO	SRS375013		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASUYG-01A-01D Catch-130953 library	PAIRED	GENOMIC	WXS	Hybrid Selection	156	62.0919372222222	Catch-130953	SRX211877	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASUYG-01A-01D Catch-130953 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0703ACXX120123.8.AGGATCTA.C829.TARGET-30-PASUYG-01A-01D.1.bam	SRR637391	@dbgap@:reads/SRP012002/SRS375013/SRX211877/SRR637391/SRR637391.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASUYG.seg.txt	3
TARGET-30-PASUYG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUYG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUYG-01A-01D	DNA	EFO	SRS375013		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASUYG-01A-01D Catch-130953 library	PAIRED	GENOMIC	WXS	Hybrid Selection	156	62.0919372222222	Catch-130953	SRX211877	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASUYG-01A-01D Catch-130953 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0703ACXX120123.8.AGGATCTA.C829.TARGET-30-PASUYG-01A-01D.1.bam	SRR637391	@dbgap@:reads/SRP012002/SRS375013/SRX211877/SRR637391/SRR637391.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PASUYG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUYG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUYG-10A-01D	DNA	EFO	SRS375012		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASUYG-10A-01D Catch-131026 library	PAIRED	GENOMIC	WXS	Hybrid Selection	161	66.1225711111111	Catch-131026	SRX211730	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASUYG-10A-01D Catch-131026 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0703ACXX120123.4.CCAGAGCT.C829.TARGET-30-PASUYG-10A-01D.1.bam	SRR638020	@dbgap@:reads/SRP012002/SRS375012/SRX211730/SRR638020/SRR638020.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASUYG.seg.txt	3
TARGET-30-PASUYG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASUYG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASUYG-10A-01D	DNA	EFO	SRS375012		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASUYG-10A-01D Catch-131026 library	PAIRED	GENOMIC	WXS	Hybrid Selection	161	66.1225711111111	Catch-131026	SRX211730	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASUYG-10A-01D Catch-131026 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0703ACXX120123.4.CCAGAGCT.C829.TARGET-30-PASUYG-10A-01D.1.bam	SRR638020	@dbgap@:reads/SRP012002/SRS375012/SRX211730/SRR638020/SRR638020.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PASVRU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASVRU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASVRU-01A-01D	DNA	EFO	SRS375437		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASVRU-01A-01D Catch-131007 library	PAIRED	GENOMIC	WXS	Hybrid Selection	152	62.7940927777778	Catch-131007	SRX211896	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASVRU-01A-01D Catch-131007 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0703ACXX120123.2.CAATAGTC.C829.TARGET-30-PASVRU-01A-01D.1.bam	SRR637481	@dbgap@:reads/SRP012002/SRS375437/SRX211896/SRR637481/SRR637481.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASVRU.seg.txt	3
TARGET-30-PASVRU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASVRU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASVRU-01A-01D	DNA	EFO	SRS375437		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASVRU-01A-01D Catch-131007 library	PAIRED	GENOMIC	WXS	Hybrid Selection	152	62.7940927777778	Catch-131007	SRX211896	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASVRU-01A-01D Catch-131007 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0703ACXX120123.2.CAATAGTC.C829.TARGET-30-PASVRU-01A-01D.1.bam	SRR637481	@dbgap@:reads/SRP012002/SRS375437/SRX211896/SRR637481/SRR637481.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PASVRU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASVRU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASVRU-10A-01D	DNA	EFO	SRS375436		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASVRU-10A-01D Catch-130938 library	PAIRED	GENOMIC	WXS	Hybrid Selection	160	65.0761255555555	Catch-130938	SRX211867	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASVRU-10A-01D Catch-130938 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079CACXX120123.8.CTACCAGG.C829.TARGET-30-PASVRU-10A-01D.1.bam	SRR637373	@dbgap@:reads/SRP012002/SRS375436/SRX211867/SRR637373/SRR637373.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASVRU.seg.txt	3
TARGET-30-PASVRU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASVRU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASVRU-10A-01D	DNA	EFO	SRS375436		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASVRU-10A-01D Catch-130938 library	PAIRED	GENOMIC	WXS	Hybrid Selection	160	65.0761255555555	Catch-130938	SRX211867	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASVRU-10A-01D Catch-130938 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079CACXX120123.8.CTACCAGG.C829.TARGET-30-PASVRU-10A-01D.1.bam	SRR637373	@dbgap@:reads/SRP012002/SRS375436/SRX211867/SRR637373/SRR637373.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PASWAU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWAU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWAU-01A-01D	DNA	EFO	SRS380170		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASWAU-01A-01D Catch-131264 library	PAIRED	GENOMIC	WXS	Hybrid Selection	164	67.1255127777778	Catch-131264	SRX211064	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASWAU-01A-01D Catch-131264 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079LACXX120123.1.ATTATGTT.C829.TARGET-30-PASWAU-01A-01D.3.bam	SRR635563	@dbgap@:reads/SRP012002/SRS380170/SRX211064/SRR635563/SRR635563.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASWAU.seg.txt	3
TARGET-30-PASWAU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWAU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWAU-10A-01D	DNA	EFO	SRS379869		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASWAU-10A-01D Catch-131266 library	PAIRED	GENOMIC	WXS	Hybrid Selection	140	75.7833294444444	Catch-131266	SRX210525	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASWAU-10A-01D Catch-131266 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079LACXX120123.3.CAGCAAGG.C829.TARGET-30-PASWAU-10A-01D.3.bam	SRR632782	@dbgap@:reads/SRP012002/SRS379869/SRX210525/SRR632782/SRR632782.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASWAU.seg.txt	3
TARGET-30-PASWFB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWFB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWFB-01A-01D	DNA	EFO	SRS380881		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASWFB-01A-01D Catch-130941 library	PAIRED	GENOMIC	WXS	Hybrid Selection	159	62.6184872222222	Catch-130941	SRX211932	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASWFB-01A-01D Catch-130941 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0703ACXX120123.3.GAAGAAGT.C829.TARGET-30-PASWFB-01A-01D.1.bam	SRR637679	@dbgap@:reads/SRP012002/SRS380881/SRX211932/SRR637679/SRR637679.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASWFB.seg.txt	3
TARGET-30-PASWFB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWFB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWFB-01A-01D	DNA	EFO	SRS380881		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASWFB-01A-01D Catch-130941 library	PAIRED	GENOMIC	WXS	Hybrid Selection	159	62.6184872222222	Catch-130941	SRX211932	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASWFB-01A-01D Catch-130941 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0703ACXX120123.3.GAAGAAGT.C829.TARGET-30-PASWFB-01A-01D.1.bam	SRR637679	@dbgap@:reads/SRP012002/SRS380881/SRX211932/SRR637679/SRR637679.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PASWFB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWFB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWFB-10A-01D	DNA	EFO	SRS380846		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASWFB-10A-01D Catch-131029 library	PAIRED	GENOMIC	WXS	Hybrid Selection	160	63.5321316666667	Catch-131029	SRX211792	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASWFB-10A-01D Catch-131029 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079CACXX120123.1.TGCTGCTG.C829.TARGET-30-PASWFB-10A-01D.1.bam	SRR637015	@dbgap@:reads/SRP012002/SRS380846/SRX211792/SRR637015/SRR637015.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASWFB.seg.txt	3
TARGET-30-PASWFB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWFB-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWFB-10A-01D	DNA	EFO	SRS380846		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASWFB-10A-01D Catch-131029 library	PAIRED	GENOMIC	WXS	Hybrid Selection	160	63.5321316666667	Catch-131029	SRX211792	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASWFB-10A-01D Catch-131029 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079CACXX120123.1.TGCTGCTG.C829.TARGET-30-PASWFB-10A-01D.1.bam	SRR637015	@dbgap@:reads/SRP012002/SRS380846/SRX211792/SRR637015/SRR637015.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PASWIJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWIJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWIJ-01A-01D	DNA	EFO	SRS380887		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASWIJ-01A-01D Catch-130943 library	PAIRED	GENOMIC	WXS	Hybrid Selection	146	59.61552	Catch-130943	SRX211978	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASWIJ-01A-01D Catch-130943 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079CACXX120123.2.TCCTTGGT.C829.TARGET-30-PASWIJ-01A-01D.1.bam	SRR638684	@dbgap@:reads/SRP012002/SRS380887/SRX211978/SRR638684/SRR638684.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASWIJ.seg.txt	3
TARGET-30-PASWIJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWIJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWIJ-01A-01D	DNA	EFO	SRS380887		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASWIJ-01A-01D Catch-130943 library	PAIRED	GENOMIC	WXS	Hybrid Selection	146	59.61552	Catch-130943	SRX211978	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASWIJ-01A-01D Catch-130943 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079CACXX120123.2.TCCTTGGT.C829.TARGET-30-PASWIJ-01A-01D.1.bam	SRR638684	@dbgap@:reads/SRP012002/SRS380887/SRX211978/SRR638684/SRR638684.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PASWIJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWIJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWIJ-10A-01D	DNA	EFO	SRS380851		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASWIJ-10A-01D Catch-130951 library	PAIRED	GENOMIC	WXS	Hybrid Selection	155	66.8820944444444	Catch-130951	SRX211809	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASWIJ-10A-01D Catch-130951 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079CACXX120123.8.GGTCCAGA.C829.TARGET-30-PASWIJ-10A-01D.1.bam	SRR638097	@dbgap@:reads/SRP012002/SRS380851/SRX211809/SRR638097/SRR638097.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASWIJ.seg.txt	3
TARGET-30-PASWIJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWIJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWIJ-10A-01D	DNA	EFO	SRS380851		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASWIJ-10A-01D Catch-130951 library	PAIRED	GENOMIC	WXS	Hybrid Selection	155	66.8820944444444	Catch-130951	SRX211809	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASWIJ-10A-01D Catch-130951 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079CACXX120123.8.GGTCCAGA.C829.TARGET-30-PASWIJ-10A-01D.1.bam	SRR638097	@dbgap@:reads/SRP012002/SRS380851/SRX211809/SRR638097/SRR638097.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PASWLY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWLY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWLY-01A-01D	DNA	EFO	SRS380888		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASWLY-01A-01D Catch-131004 library	PAIRED	GENOMIC	WXS	Hybrid Selection	150	59.8006188888889	Catch-131004	SRX211985	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASWLY-01A-01D Catch-131004 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079CACXX120123.8.CAGCGGTA.C829.TARGET-30-PASWLY-01A-01D.1.bam	SRR638532	@dbgap@:reads/SRP012002/SRS380888/SRX211985/SRR638532/SRR638532.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASWLY.seg.txt	3
TARGET-30-PASWLY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWLY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWLY-01A-01D	DNA	EFO	SRS380888		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASWLY-01A-01D Catch-131004 library	PAIRED	GENOMIC	WXS	Hybrid Selection	150	59.8006188888889	Catch-131004	SRX211985	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASWLY-01A-01D Catch-131004 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079CACXX120123.8.CAGCGGTA.C829.TARGET-30-PASWLY-01A-01D.1.bam	SRR638532	@dbgap@:reads/SRP012002/SRS380888/SRX211985/SRR638532/SRR638532.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PASWLY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWLY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWLY-10A-01D	DNA	EFO	SRS380868		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASWLY-10A-01D Catch-130970 library	PAIRED	GENOMIC	WXS	Hybrid Selection	146	58.2881177777778	Catch-130970	SRX211885	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASWLY-10A-01D Catch-130970 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079CACXX120123.1.GTAACATC.C829.TARGET-30-PASWLY-10A-01D.1.bam	SRR637427	@dbgap@:reads/SRP012002/SRS380868/SRX211885/SRR637427/SRR637427.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASWLY.seg.txt	3
TARGET-30-PASWLY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWLY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWLY-10A-01D	DNA	EFO	SRS380868		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASWLY-10A-01D Catch-130970 library	PAIRED	GENOMIC	WXS	Hybrid Selection	146	58.2881177777778	Catch-130970	SRX211885	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASWLY-10A-01D Catch-130970 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079CACXX120123.1.GTAACATC.C829.TARGET-30-PASWLY-10A-01D.1.bam	SRR637427	@dbgap@:reads/SRP012002/SRS380868/SRX211885/SRR637427/SRR637427.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PASWVY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWVY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWVY-01A-01D	DNA	EFO	SRS375431		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASWVY-01A-01D Catch-130975 library	PAIRED	GENOMIC	WXS	Hybrid Selection	158	65.0147683333333	Catch-130975	SRX211773	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASWVY-01A-01D Catch-130975 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0703ACXX120123.3.TTCGCTGA.C829.TARGET-30-PASWVY-01A-01D.1.bam	SRR637913	@dbgap@:reads/SRP012002/SRS375431/SRX211773/SRR637913/SRR637913.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASWVY.seg.txt	3
TARGET-30-PASWVY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWVY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWVY-01A-01D	DNA	EFO	SRS375431		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASWVY-01A-01D Catch-130975 library	PAIRED	GENOMIC	WXS	Hybrid Selection	158	65.0147683333333	Catch-130975	SRX211773	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASWVY-01A-01D Catch-130975 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0703ACXX120123.3.TTCGCTGA.C829.TARGET-30-PASWVY-01A-01D.1.bam	SRR637913	@dbgap@:reads/SRP012002/SRS375431/SRX211773/SRR637913/SRR637913.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PASWVY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWVY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWVY-10A-01D	DNA	EFO	SRS375430		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASWVY-10A-01D Catch-130969 library	PAIRED	GENOMIC	WXS	Hybrid Selection	156	62.7884777777778	Catch-130969	SRX211956	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASWVY-10A-01D Catch-130969 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079CACXX120123.7.GCCGTCGA.C829.TARGET-30-PASWVY-10A-01D.1.bam	SRR638259	@dbgap@:reads/SRP012002/SRS375430/SRX211956/SRR638259/SRR638259.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASWVY.seg.txt	3
TARGET-30-PASWVY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWVY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWVY-10A-01D	DNA	EFO	SRS375430		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASWVY-10A-01D Catch-130969 library	PAIRED	GENOMIC	WXS	Hybrid Selection	156	62.7884777777778	Catch-130969	SRX211956	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASWVY-10A-01D Catch-130969 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079CACXX120123.7.GCCGTCGA.C829.TARGET-30-PASWVY-10A-01D.1.bam	SRR638259	@dbgap@:reads/SRP012002/SRS375430/SRX211956/SRR638259/SRR638259.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PASWYR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWYR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWYR-01A-01D	DNA	EFO	SRS380841		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASWYR-01A-01D Catch-130946 library	PAIRED	GENOMIC	WXS	Hybrid Selection	156	62.6613338888889	Catch-130946	SRX211765	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASWYR-01A-01D Catch-130946 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0703ACXX120123.5.AGGTAAGG.C829.TARGET-30-PASWYR-01A-01D.1.bam	SRR637517	@dbgap@:reads/SRP012002/SRS380841/SRX211765/SRR637517/SRR637517.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASWYR.seg.txt	3
TARGET-30-PASWYR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWYR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWYR-01A-01D	DNA	EFO	SRS380841		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASWYR-01A-01D Catch-130946 library	PAIRED	GENOMIC	WXS	Hybrid Selection	156	62.6613338888889	Catch-130946	SRX211765	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASWYR-01A-01D Catch-130946 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0703ACXX120123.5.AGGTAAGG.C829.TARGET-30-PASWYR-01A-01D.1.bam	SRR637517	@dbgap@:reads/SRP012002/SRS380841/SRX211765/SRR637517/SRR637517.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PASWYR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWYR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWYR-10A-01D	DNA	EFO	SRS380853		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASWYR-10A-01D Catch-130944 library	PAIRED	GENOMIC	WXS	Hybrid Selection	156	61.423455	Catch-130944	SRX211815	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASWYR-10A-01D Catch-130944 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0703ACXX120123.1.AACGCATT.C829.TARGET-30-PASWYR-10A-01D.1.bam	SRR637139	@dbgap@:reads/SRP012002/SRS380853/SRX211815/SRR637139/SRR637139.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASWYR.seg.txt	3
TARGET-30-PASWYR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASWYR-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASWYR-10A-01D	DNA	EFO	SRS380853		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASWYR-10A-01D Catch-130944 library	PAIRED	GENOMIC	WXS	Hybrid Selection	156	61.423455	Catch-130944	SRX211815	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASWYR-10A-01D Catch-130944 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0703ACXX120123.1.AACGCATT.C829.TARGET-30-PASWYR-10A-01D.1.bam	SRR637139	@dbgap@:reads/SRP012002/SRS380853/SRX211815/SRR637139/SRR637139.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PASXGP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXGP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXGP-01A-01D	DNA	EFO	SRS380861		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASXGP-01A-01D Catch-131001 library	PAIRED	GENOMIC	WXS	Hybrid Selection	150	60.5524361111111	Catch-131001	SRX211846	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-25	TARGET-30-PASXGP-01A-01D Catch-131001 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0JTGACXX120125.4.ATAGCGTC.C829.TARGET-30-PASXGP-01A-01D.1.bam	SRR638495	@dbgap@:reads/SRP012002/SRS380861/SRX211846/SRR638495/SRR638495.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASXGP.seg.txt	3
TARGET-30-PASXGP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXGP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXGP-01A-01D	DNA	EFO	SRS380861		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASXGP-01A-01D Catch-131001 library	PAIRED	GENOMIC	WXS	Hybrid Selection	150	60.5524361111111	Catch-131001	SRX211846	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-25	TARGET-30-PASXGP-01A-01D Catch-131001 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0JTGACXX120125.4.ATAGCGTC.C829.TARGET-30-PASXGP-01A-01D.1.bam	SRR638495	@dbgap@:reads/SRP012002/SRS380861/SRX211846/SRR638495/SRR638495.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PASXGP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXGP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXGP-10A-01D	DNA	EFO	SRS380849		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASXGP-10A-01D Catch-130992 library	PAIRED	GENOMIC	WXS	Hybrid Selection	149	60.957365	Catch-130992	SRX211804	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASXGP-10A-01D Catch-130992 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079CACXX120123.6.AATGTTCT.C829.TARGET-30-PASXGP-10A-01D.1.bam	SRR637086	@dbgap@:reads/SRP012002/SRS380849/SRX211804/SRR637086/SRR637086.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASXGP.seg.txt	3
TARGET-30-PASXGP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXGP-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXGP-10A-01D	DNA	EFO	SRS380849		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASXGP-10A-01D Catch-130992 library	PAIRED	GENOMIC	WXS	Hybrid Selection	149	60.957365	Catch-130992	SRX211804	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASXGP-10A-01D Catch-130992 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079CACXX120123.6.AATGTTCT.C829.TARGET-30-PASXGP-10A-01D.1.bam	SRR637086	@dbgap@:reads/SRP012002/SRS380849/SRX211804/SRR637086/SRR637086.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PASXHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXHE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXHE-01A-01D	DNA	EFO	SRS375190		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASXHE-01A-01D Catch-131027 library	PAIRED	GENOMIC	WXS	Hybrid Selection	155	66.3640777777778	Catch-131027	SRX211853	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASXHE-01A-01D Catch-131027 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079CACXX120123.3.TAATGAAC.C829.TARGET-30-PASXHE-01A-01D.1.bam	SRR637283	@dbgap@:reads/SRP012002/SRS375190/SRX211853/SRR637283/SRR637283.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASXHE.seg.txt	3
TARGET-30-PASXHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXHE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXHE-01A-01D	DNA	EFO	SRS375190		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASXHE-01A-01D Catch-131027 library	PAIRED	GENOMIC	WXS	Hybrid Selection	155	66.3640777777778	Catch-131027	SRX211853	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASXHE-01A-01D Catch-131027 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079CACXX120123.3.TAATGAAC.C829.TARGET-30-PASXHE-01A-01D.1.bam	SRR637283	@dbgap@:reads/SRP012002/SRS375190/SRX211853/SRR637283/SRR637283.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PASXHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXHE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXHE-10A-01D	DNA	EFO	SRS375189		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASXHE-10A-01D Catch-131019 library	PAIRED	GENOMIC	WXS	Hybrid Selection	153	61.8490755555556	Catch-131019	SRX211880	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASXHE-10A-01D Catch-131019 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0703ACXX120123.8.GACCGTTG.C829.TARGET-30-PASXHE-10A-01D.1.bam	SRR637409	@dbgap@:reads/SRP012002/SRS375189/SRX211880/SRR637409/SRR637409.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASXHE.seg.txt	3
TARGET-30-PASXHE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXHE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXHE-10A-01D	DNA	EFO	SRS375189		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASXHE-10A-01D Catch-131019 library	PAIRED	GENOMIC	WXS	Hybrid Selection	153	61.8490755555556	Catch-131019	SRX211880	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASXHE-10A-01D Catch-131019 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0703ACXX120123.8.GACCGTTG.C829.TARGET-30-PASXHE-10A-01D.1.bam	SRR637409	@dbgap@:reads/SRP012002/SRS375189/SRX211880/SRR637409/SRR637409.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PASXIE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXIE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXIE-01A-01D	DNA	EFO	SRS380877		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASXIE-01A-01D Catch-130955 library	PAIRED	GENOMIC	WXS	Hybrid Selection	153	59.8894611111111	Catch-130955	SRX211922	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASXIE-01A-01D Catch-130955 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079CACXX120123.4.AGGTTATC.C829.TARGET-30-PASXIE-01A-01D.1.bam	SRR638514	@dbgap@:reads/SRP012002/SRS380877/SRX211922/SRR638514/SRR638514.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASXIE.seg.txt	3
TARGET-30-PASXIE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXIE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXIE-01A-01D	DNA	EFO	SRS380877		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASXIE-01A-01D Catch-130955 library	PAIRED	GENOMIC	WXS	Hybrid Selection	153	59.8894611111111	Catch-130955	SRX211922	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASXIE-01A-01D Catch-130955 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079CACXX120123.4.AGGTTATC.C829.TARGET-30-PASXIE-01A-01D.1.bam	SRR638514	@dbgap@:reads/SRP012002/SRS380877/SRX211922/SRR638514/SRR638514.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PASXIE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXIE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXIE-10A-01D	DNA	EFO	SRS380889		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASXIE-10A-01D Catch-131025 library	PAIRED	GENOMIC	WXS	Hybrid Selection	160	65.4772994444444	Catch-131025	SRX211988	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASXIE-10A-01D Catch-131025 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0703ACXX120123.4.ATTCTAGG.C829.TARGET-30-PASXIE-10A-01D.1.bam	SRR638441	@dbgap@:reads/SRP012002/SRS380889/SRX211988/SRR638441/SRR638441.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASXIE.seg.txt	3
TARGET-30-PASXIE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXIE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXIE-10A-01D	DNA	EFO	SRS380889		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASXIE-10A-01D Catch-131025 library	PAIRED	GENOMIC	WXS	Hybrid Selection	160	65.4772994444444	Catch-131025	SRX211988	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASXIE-10A-01D Catch-131025 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0703ACXX120123.4.ATTCTAGG.C829.TARGET-30-PASXIE-10A-01D.1.bam	SRR638441	@dbgap@:reads/SRP012002/SRS380889/SRX211988/SRR638441/SRR638441.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PASXNN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXNN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXNN-01A-01D	DNA	EFO	SRS380864		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASXNN-01A-01D Catch-130983 library	PAIRED	GENOMIC	WXS	Hybrid Selection	158	66.7353677777778	Catch-130983	SRX211859	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASXNN-01A-01D Catch-130983 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079CACXX120123.5.TCGCTAGA.C829.TARGET-30-PASXNN-01A-01D.1.bam	SRR638133	@dbgap@:reads/SRP012002/SRS380864/SRX211859/SRR638133/SRR638133.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASXNN.seg.txt	3
TARGET-30-PASXNN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXNN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXNN-01A-01D	DNA	EFO	SRS380864		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASXNN-01A-01D Catch-130983 library	PAIRED	GENOMIC	WXS	Hybrid Selection	158	66.7353677777778	Catch-130983	SRX211859	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASXNN-01A-01D Catch-130983 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079CACXX120123.5.TCGCTAGA.C829.TARGET-30-PASXNN-01A-01D.1.bam	SRR638133	@dbgap@:reads/SRP012002/SRS380864/SRX211859/SRR638133/SRR638133.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PASXNN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXNN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXNN-10A-01D	DNA	EFO	SRS380872		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASXNN-10A-01D Catch-130950 library	PAIRED	GENOMIC	WXS	Hybrid Selection	161	64.6327888888889	Catch-130950	SRX211904	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASXNN-10A-01D Catch-130950 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0703ACXX120123.8.CATGCTTA.C829.TARGET-30-PASXNN-10A-01D.1.bam	SRR637895	@dbgap@:reads/SRP012002/SRS380872/SRX211904/SRR637895/SRR637895.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASXNN.seg.txt	3
TARGET-30-PASXNN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXNN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXNN-10A-01D	DNA	EFO	SRS380872		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASXNN-10A-01D Catch-130950 library	PAIRED	GENOMIC	WXS	Hybrid Selection	161	64.6327888888889	Catch-130950	SRX211904	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASXNN-10A-01D Catch-130950 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0703ACXX120123.8.CATGCTTA.C829.TARGET-30-PASXNN-10A-01D.1.bam	SRR637895	@dbgap@:reads/SRP012002/SRS380872/SRX211904/SRR637895/SRR637895.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PASXRG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXRG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXRG-01A-01D	DNA	EFO	SRS380839		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASXRG-01A-01D Catch-130940 library	PAIRED	GENOMIC	WXS	Hybrid Selection	156	61.9453833333333	Catch-130940	SRX211758	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASXRG-01A-01D Catch-130940 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0703ACXX120123.8.GCACACGA.C829.TARGET-30-PASXRG-01A-01D.1.bam	SRR637787	@dbgap@:reads/SRP012002/SRS380839/SRX211758/SRR637787/SRR637787.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASXRG.seg.txt	3
TARGET-30-PASXRG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXRG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXRG-01A-01D	DNA	EFO	SRS380839		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASXRG-01A-01D Catch-130940 library	PAIRED	GENOMIC	WXS	Hybrid Selection	156	61.9453833333333	Catch-130940	SRX211758	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASXRG-01A-01D Catch-130940 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0703ACXX120123.8.GCACACGA.C829.TARGET-30-PASXRG-01A-01D.1.bam	SRR637787	@dbgap@:reads/SRP012002/SRS380839/SRX211758/SRR637787/SRR637787.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PASXRG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXRG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXRG-10A-01D	DNA	EFO	SRS380850		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASXRG-10A-01D Catch-131014 library	PAIRED	GENOMIC	WXS	Hybrid Selection	142	64.3780177777778	Catch-131014	SRX211808	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASXRG-10A-01D Catch-131014 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079CACXX120123.4.TCCAGCAA.C829.TARGET-30-PASXRG-10A-01D.1.bam	SRR637104	@dbgap@:reads/SRP012002/SRS380850/SRX211808/SRR637104/SRR637104.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASXRG.seg.txt	3
TARGET-30-PASXRG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXRG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXRG-10A-01D	DNA	EFO	SRS380850		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASXRG-10A-01D Catch-131014 library	PAIRED	GENOMIC	WXS	Hybrid Selection	142	64.3780177777778	Catch-131014	SRX211808	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASXRG-10A-01D Catch-131014 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079CACXX120123.4.TCCAGCAA.C829.TARGET-30-PASXRG-10A-01D.1.bam	SRR637104	@dbgap@:reads/SRP012002/SRS380850/SRX211808/SRR637104/SRR637104.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PASXRJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXRJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXRJ-01A-01D	DNA	EFO	SRS380870		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASXRJ-01A-01D Catch-130990 library	PAIRED	GENOMIC	WXS	Hybrid Selection	154	59.1628261111111	Catch-130990	SRX211892	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-25	TARGET-30-PASXRJ-01A-01D Catch-130990 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0JTGACXX120125.4.AAGACACT.C829.TARGET-30-PASXRJ-01A-01D.1.bam	SRR637445	@dbgap@:reads/SRP012002/SRS380870/SRX211892/SRR637445/SRR637445.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASXRJ.seg.txt	3
TARGET-30-PASXRJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXRJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXRJ-01A-01D	DNA	EFO	SRS380870		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASXRJ-01A-01D Catch-130990 library	PAIRED	GENOMIC	WXS	Hybrid Selection	154	59.1628261111111	Catch-130990	SRX211892	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-25	TARGET-30-PASXRJ-01A-01D Catch-130990 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0JTGACXX120125.4.AAGACACT.C829.TARGET-30-PASXRJ-01A-01D.1.bam	SRR637445	@dbgap@:reads/SRP012002/SRS380870/SRX211892/SRR637445/SRR637445.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PASXRJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXRJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXRJ-10A-01D	DNA	EFO	SRS380847		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASXRJ-10A-01D Catch-130958 library	PAIRED	GENOMIC	WXS	Hybrid Selection	156	63.2975027777778	Catch-130958	SRX211798	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASXRJ-10A-01D Catch-130958 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0703ACXX120123.6.CTAACTCG.C829.TARGET-30-PASXRJ-10A-01D.1.bam	SRR637051	@dbgap@:reads/SRP012002/SRS380847/SRX211798/SRR637051/SRR637051.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASXRJ.seg.txt	3
TARGET-30-PASXRJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASXRJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASXRJ-10A-01D	DNA	EFO	SRS380847		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASXRJ-10A-01D Catch-130958 library	PAIRED	GENOMIC	WXS	Hybrid Selection	156	63.2975027777778	Catch-130958	SRX211798	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASXRJ-10A-01D Catch-130958 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0703ACXX120123.6.CTAACTCG.C829.TARGET-30-PASXRJ-10A-01D.1.bam	SRR637051	@dbgap@:reads/SRP012002/SRS380847/SRX211798/SRR637051/SRR637051.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PASYLD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYLD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYLD-01A-01D	DNA	EFO	SRS380876		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASYLD-01A-01D Catch-131006 library	PAIRED	GENOMIC	WXS	Hybrid Selection	153	60.3697261111111	Catch-131006	SRX211915	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASYLD-01A-01D Catch-131006 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0703ACXX120123.2.CTATGCGT.C829.TARGET-30-PASYLD-01A-01D.1.bam	SRR638349	@dbgap@:reads/SRP012002/SRS380876/SRX211915/SRR638349/SRR638349.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASYLD.seg.txt	3
TARGET-30-PASYLD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYLD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYLD-01A-01D	DNA	EFO	SRS380876		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASYLD-01A-01D Catch-131006 library	PAIRED	GENOMIC	WXS	Hybrid Selection	153	60.3697261111111	Catch-131006	SRX211915	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASYLD-01A-01D Catch-131006 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0703ACXX120123.2.CTATGCGT.C829.TARGET-30-PASYLD-01A-01D.1.bam	SRR638349	@dbgap@:reads/SRP012002/SRS380876/SRX211915/SRR638349/SRR638349.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PASYLD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYLD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYLD-10A-01D	DNA	EFO	SRS380854		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASYLD-10A-01D Catch-131032 library	PAIRED	GENOMIC	WXS	Hybrid Selection	155	65.1838916666667	Catch-131032	SRX211820	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASYLD-10A-01D Catch-131032 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0703ACXX120123.2.TGTAACTC.C829.TARGET-30-PASYLD-10A-01D.1.bam	SRR637805	@dbgap@:reads/SRP012002/SRS380854/SRX211820/SRR637805/SRR637805.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASYLD.seg.txt	3
TARGET-30-PASYLD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYLD-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYLD-10A-01D	DNA	EFO	SRS380854		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASYLD-10A-01D Catch-131032 library	PAIRED	GENOMIC	WXS	Hybrid Selection	155	65.1838916666667	Catch-131032	SRX211820	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASYLD-10A-01D Catch-131032 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0703ACXX120123.2.TGTAACTC.C829.TARGET-30-PASYLD-10A-01D.1.bam	SRR637805	@dbgap@:reads/SRP012002/SRS380854/SRX211820/SRR637805/SRR637805.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PASYMX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYMX-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYMX-01A-01D	DNA	EFO	SRS380883		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASYMX-01A-01D Catch-131018 library	PAIRED	GENOMIC	WXS	Hybrid Selection	141	63.9867155555556	Catch-131018	SRX211939	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASYMX-01A-01D Catch-131018 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0703ACXX120123.2.GTCCACAG.C829.TARGET-30-PASYMX-01A-01D.1.bam	SRR637697	@dbgap@:reads/SRP012002/SRS380883/SRX211939/SRR637697/SRR637697.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASYMX.seg.txt	3
TARGET-30-PASYMX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYMX-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYMX-01A-01D	DNA	EFO	SRS380883		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASYMX-01A-01D Catch-131018 library	PAIRED	GENOMIC	WXS	Hybrid Selection	141	63.9867155555556	Catch-131018	SRX211939	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASYMX-01A-01D Catch-131018 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0703ACXX120123.2.GTCCACAG.C829.TARGET-30-PASYMX-01A-01D.1.bam	SRR637697	@dbgap@:reads/SRP012002/SRS380883/SRX211939/SRR637697/SRR637697.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PASYMX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYMX-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYMX-10A-01D	DNA	EFO	SRS380882		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASYMX-10A-01D Catch-131023 library	PAIRED	GENOMIC	WXS	Hybrid Selection	158	69.3520411111111	Catch-131023	SRX211935	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASYMX-10A-01D Catch-131023 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079CACXX120123.3.AAGGATGT.C829.TARGET-30-PASYMX-10A-01D.1.bam	SRR638169	@dbgap@:reads/SRP012002/SRS380882/SRX211935/SRR638169/SRR638169.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASYMX.seg.txt	3
TARGET-30-PASYMX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYMX-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYMX-10A-01D	DNA	EFO	SRS380882		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASYMX-10A-01D Catch-131023 library	PAIRED	GENOMIC	WXS	Hybrid Selection	158	69.3520411111111	Catch-131023	SRX211935	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASYMX-10A-01D Catch-131023 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079CACXX120123.3.AAGGATGT.C829.TARGET-30-PASYMX-10A-01D.1.bam	SRR638169	@dbgap@:reads/SRP012002/SRS380882/SRX211935/SRR638169/SRR638169.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PASYPX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYPX-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYPX-01A-01D	DNA	EFO	SRS380865		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASYPX-01A-01D Catch-131005 library	PAIRED	GENOMIC	WXS	Hybrid Selection	150	61.8069227777778	Catch-131005	SRX211874	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASYPX-01A-01D Catch-131005 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0703ACXX120123.6.CGCCTTCC.C829.TARGET-30-PASYPX-01A-01D.1.bam	SRR638597	@dbgap@:reads/SRP012002/SRS380865/SRX211874/SRR638597/SRR638597.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASYPX.seg.txt	3
TARGET-30-PASYPX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYPX-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYPX-01A-01D	DNA	EFO	SRS380865		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASYPX-01A-01D Catch-131005 library	PAIRED	GENOMIC	WXS	Hybrid Selection	150	61.8069227777778	Catch-131005	SRX211874	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASYPX-01A-01D Catch-131005 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0703ACXX120123.6.CGCCTTCC.C829.TARGET-30-PASYPX-01A-01D.1.bam	SRR638597	@dbgap@:reads/SRP012002/SRS380865/SRX211874/SRR638597/SRR638597.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PASYPX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYPX-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYPX-10A-01D	DNA	EFO	SRS380874		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASYPX-10A-01D Catch-130978 library	PAIRED	GENOMIC	WXS	Hybrid Selection	151	55.7613205555556	Catch-130978	SRX211909	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASYPX-10A-01D Catch-130978 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079CACXX120123.7.TTGAATAG.C829.TARGET-30-PASYPX-10A-01D.1.bam	SRR637571	@dbgap@:reads/SRP012002/SRS380874/SRX211909/SRR637571/SRR637571.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASYPX.seg.txt	3
TARGET-30-PASYPX	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASYPX-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASYPX-10A-01D	DNA	EFO	SRS380874		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASYPX-10A-01D Catch-130978 library	PAIRED	GENOMIC	WXS	Hybrid Selection	151	55.7613205555556	Catch-130978	SRX211909	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASYPX-10A-01D Catch-130978 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079CACXX120123.7.TTGAATAG.C829.TARGET-30-PASYPX-10A-01D.1.bam	SRR637571	@dbgap@:reads/SRP012002/SRS380874/SRX211909/SRR637571/SRR637571.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PASZPI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASZPI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASZPI-01A-01D	DNA	EFO	SRS380843		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASZPI-01A-01D Catch-130964 library	PAIRED	GENOMIC	WXS	Hybrid Selection	154	66.2458966666667	Catch-130964	SRX211780	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASZPI-01A-01D Catch-130964 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079CACXX120123.4.CATAGCGA.C829.TARGET-30-PASZPI-01A-01D.1.bam	SRR637931	@dbgap@:reads/SRP012002/SRS380843/SRX211780/SRR637931/SRR637931.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASZPI.seg.txt	3
TARGET-30-PASZPI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASZPI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASZPI-01A-01D	DNA	EFO	SRS380843		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASZPI-01A-01D Catch-130964 library	PAIRED	GENOMIC	WXS	Hybrid Selection	154	66.2458966666667	Catch-130964	SRX211780	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASZPI-01A-01D Catch-130964 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079CACXX120123.4.CATAGCGA.C829.TARGET-30-PASZPI-01A-01D.1.bam	SRR637931	@dbgap@:reads/SRP012002/SRS380843/SRX211780/SRR637931/SRR637931.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PASZPI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASZPI-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASZPI-10A-01D	DNA	EFO	SRS380878		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASZPI-10A-01D Catch-131008 library	PAIRED	GENOMIC	WXS	Hybrid Selection	159	63.929185	Catch-131008	SRX211925	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASZPI-10A-01D Catch-131008 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0703ACXX120123.2.CGCTATGT.C829.TARGET-30-PASZPI-10A-01D.1.bam	SRR638367	@dbgap@:reads/SRP012002/SRS380878/SRX211925/SRR638367/SRR638367.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PASZPI.seg.txt	3
TARGET-30-PASZPI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PASZPI-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PASZPI-10A-01D	DNA	EFO	SRS380878		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PASZPI-10A-01D Catch-131008 library	PAIRED	GENOMIC	WXS	Hybrid Selection	159	63.929185	Catch-131008	SRX211925	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PASZPI-10A-01D Catch-131008 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0703ACXX120123.2.CGCTATGT.C829.TARGET-30-PASZPI-10A-01D.1.bam	SRR638367	@dbgap@:reads/SRP012002/SRS380878/SRX211925/SRR638367/SRR638367.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PATBMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATBMM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATBMM-01A-01D	DNA	EFO	SRS376030		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PATBMM-01A-01D Catch-130956 library	PAIRED	GENOMIC	WXS	Hybrid Selection	162	58.2460866666667	Catch-130956	SRX211755	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-25	TARGET-30-PATBMM-01A-01D Catch-130956 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0JTGACXX120125.8.CAACTCTC.C829.TARGET-30-PATBMM-01A-01D.1.bam	SRR637769	@dbgap@:reads/SRP012002/SRS376030/SRX211755/SRR637769/SRR637769.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PATBMM.seg.txt	3
TARGET-30-PATBMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATBMM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATBMM-01A-01D	DNA	EFO	SRS376030		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PATBMM-01A-01D Catch-130956 library	PAIRED	GENOMIC	WXS	Hybrid Selection	162	58.2460866666667	Catch-130956	SRX211755	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-25	TARGET-30-PATBMM-01A-01D Catch-130956 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0JTGACXX120125.8.CAACTCTC.C829.TARGET-30-PATBMM-01A-01D.1.bam	SRR637769	@dbgap@:reads/SRP012002/SRS376030/SRX211755/SRR637769/SRR637769.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PATBMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATBMM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATBMM-10A-01D	DNA	EFO	SRS376029		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PATBMM-10A-01D Catch-130989 library	PAIRED	GENOMIC	WXS	Hybrid Selection	152	60.1069305555556	Catch-130989	SRX211990	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PATBMM-10A-01D Catch-130989 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079CACXX120123.1.TCGCCTTG.C829.TARGET-30-PATBMM-10A-01D.1.bam	SRR638277	@dbgap@:reads/SRP012002/SRS376029/SRX211990/SRR638277/SRR638277.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PATBMM.seg.txt	3
TARGET-30-PATBMM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATBMM-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATBMM-10A-01D	DNA	EFO	SRS376029		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PATBMM-10A-01D Catch-130989 library	PAIRED	GENOMIC	WXS	Hybrid Selection	152	60.1069305555556	Catch-130989	SRX211990	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PATBMM-10A-01D Catch-130989 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079CACXX120123.1.TCGCCTTG.C829.TARGET-30-PATBMM-10A-01D.1.bam	SRR638277	@dbgap@:reads/SRP012002/SRS376029/SRX211990/SRR638277/SRR638277.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PATCFL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATCFL-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATCFL-01A-01D	DNA	EFO	SRS380866		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PATCFL-01A-01D Catch-130987 library	PAIRED	GENOMIC	WXS	Hybrid Selection	156	66.4361177777778	Catch-130987	SRX211871	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PATCFL-01A-01D Catch-130987 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079CACXX120123.2.AACTTGAC.C829.TARGET-30-PATCFL-01A-01D.1.bam	SRR637985	@dbgap@:reads/SRP012002/SRS380866/SRX211871/SRR637985/SRR637985.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PATCFL.seg.txt	3
TARGET-30-PATCFL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATCFL-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATCFL-01A-01D	DNA	EFO	SRS380866		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PATCFL-01A-01D Catch-130987 library	PAIRED	GENOMIC	WXS	Hybrid Selection	156	66.4361177777778	Catch-130987	SRX211871	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PATCFL-01A-01D Catch-130987 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079CACXX120123.2.AACTTGAC.C829.TARGET-30-PATCFL-01A-01D.1.bam	SRR637985	@dbgap@:reads/SRP012002/SRS380866/SRX211871/SRR637985/SRR637985.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PATCFL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATCFL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATCFL-10A-01D	DNA	EFO	SRS380858		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PATCFL-10A-01D Catch-130939 library	PAIRED	GENOMIC	WXS	Hybrid Selection	145	58.2477077777778	Catch-130939	SRX211833	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PATCFL-10A-01D Catch-130939 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079CACXX120123.1.ACCAACTG.C829.TARGET-30-PATCFL-10A-01D.1.bam	SRR637211	@dbgap@:reads/SRP012002/SRS380858/SRX211833/SRR637211/SRR637211.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PATCFL.seg.txt	3
TARGET-30-PATCFL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATCFL-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATCFL-10A-01D	DNA	EFO	SRS380858		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PATCFL-10A-01D Catch-130939 library	PAIRED	GENOMIC	WXS	Hybrid Selection	145	58.2477077777778	Catch-130939	SRX211833	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PATCFL-10A-01D Catch-130939 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079CACXX120123.1.ACCAACTG.C829.TARGET-30-PATCFL-10A-01D.1.bam	SRR637211	@dbgap@:reads/SRP012002/SRS380858/SRX211833/SRR637211/SRR637211.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PATDWN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATDWN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATDWN-01A-01D	DNA	EFO	SRS380835		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PATDWN-01A-01D Catch-131030 library	PAIRED	GENOMIC	WXS	Hybrid Selection	154	63.2998933333333	Catch-131030	SRX211727	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PATDWN-01A-01D Catch-131030 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079CACXX120123.4.TTGTCTAT.C829.TARGET-30-PATDWN-01A-01D.1.bam	SRR636979	@dbgap@:reads/SRP012002/SRS380835/SRX211727/SRR636979/SRR636979.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PATDWN.seg.txt	3
TARGET-30-PATDWN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATDWN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATDWN-01A-01D	DNA	EFO	SRS380835		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PATDWN-01A-01D Catch-131030 library	PAIRED	GENOMIC	WXS	Hybrid Selection	154	63.2998933333333	Catch-131030	SRX211727	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PATDWN-01A-01D Catch-131030 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079CACXX120123.4.TTGTCTAT.C829.TARGET-30-PATDWN-01A-01D.1.bam	SRR636979	@dbgap@:reads/SRP012002/SRS380835/SRX211727/SRR636979/SRR636979.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PATDWN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATDWN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATDWN-10A-01D	DNA	EFO	SRS380833		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PATDWN-10A-01D Catch-131010 library	PAIRED	GENOMIC	WXS	Hybrid Selection	157	66.61806	Catch-131010	SRX211719	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PATDWN-10A-01D Catch-131010 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0703ACXX120123.4.CCAGTTAG.C829.TARGET-30-PATDWN-10A-01D.1.bam	SRR638331	@dbgap@:reads/SRP012002/SRS380833/SRX211719/SRR638331/SRR638331.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PATDWN.seg.txt	3
TARGET-30-PATDWN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATDWN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATDWN-10A-01D	DNA	EFO	SRS380833		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PATDWN-10A-01D Catch-131010 library	PAIRED	GENOMIC	WXS	Hybrid Selection	157	66.61806	Catch-131010	SRX211719	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PATDWN-10A-01D Catch-131010 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0703ACXX120123.4.CCAGTTAG.C829.TARGET-30-PATDWN-10A-01D.1.bam	SRR638331	@dbgap@:reads/SRP012002/SRS380833/SRX211719/SRR638331/SRR638331.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PATDXC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATDXC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATDXC-01A-01D	DNA	EFO	SRS380840		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PATDXC-01A-01D Catch-131000 library	PAIRED	GENOMIC	WXS	Hybrid Selection	160	64.7055055555555	Catch-131000	SRX211762	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PATDXC-01A-01D Catch-131000 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0703ACXX120123.5.ATTATGTT.C829.TARGET-30-PATDXC-01A-01D.1.bam	SRR637157	@dbgap@:reads/SRP012002/SRS380840/SRX211762/SRR637157/SRR637157.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PATDXC.seg.txt	3
TARGET-30-PATDXC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATDXC-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATDXC-01A-01D	DNA	EFO	SRS380840		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PATDXC-01A-01D Catch-131000 library	PAIRED	GENOMIC	WXS	Hybrid Selection	160	64.7055055555555	Catch-131000	SRX211762	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PATDXC-01A-01D Catch-131000 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0703ACXX120123.5.ATTATGTT.C829.TARGET-30-PATDXC-01A-01D.1.bam	SRR637157	@dbgap@:reads/SRP012002/SRS380840/SRX211762/SRR637157/SRR637157.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PATDXC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATDXC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATDXC-10A-01D	DNA	EFO	SRS380836		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PATDXC-10A-01D Catch-130982 library	PAIRED	GENOMIC	WXS	Hybrid Selection	156	64.4747416666667	Catch-130982	SRX211736	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PATDXC-10A-01D Catch-130982 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079CACXX120123.3.TGTAATCA.C829.TARGET-30-PATDXC-10A-01D.1.bam	SRR637625	@dbgap@:reads/SRP012002/SRS380836/SRX211736/SRR637625/SRR637625.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PATDXC.seg.txt	3
TARGET-30-PATDXC	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATDXC-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATDXC-10A-01D	DNA	EFO	SRS380836		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PATDXC-10A-01D Catch-130982 library	PAIRED	GENOMIC	WXS	Hybrid Selection	156	64.4747416666667	Catch-130982	SRX211736	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PATDXC-10A-01D Catch-130982 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079CACXX120123.3.TGTAATCA.C829.TARGET-30-PATDXC-10A-01D.1.bam	SRR637625	@dbgap@:reads/SRP012002/SRS380836/SRX211736/SRR637625/SRR637625.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PATDXG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATDXG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATDXG-01A-01D	DNA	EFO	SRS380886		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PATDXG-01A-01D Catch-131020 library	PAIRED	GENOMIC	WXS	Hybrid Selection	153	61.6975622222222	Catch-131020	SRX211967	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PATDXG-01A-01D Catch-131020 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079CACXX120123.7.GATATCCA.C829.TARGET-30-PATDXG-01A-01D.1.bam	SRR638386	@dbgap@:reads/SRP012002/SRS380886/SRX211967/SRR638386/SRR638386.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PATDXG.seg.txt	3
TARGET-30-PATDXG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATDXG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATDXG-01A-01D	DNA	EFO	SRS380886		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PATDXG-01A-01D Catch-131020 library	PAIRED	GENOMIC	WXS	Hybrid Selection	153	61.6975622222222	Catch-131020	SRX211967	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PATDXG-01A-01D Catch-131020 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079CACXX120123.7.GATATCCA.C829.TARGET-30-PATDXG-01A-01D.1.bam	SRR638386	@dbgap@:reads/SRP012002/SRS380886/SRX211967/SRR638386/SRR638386.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PATDXG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATDXG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATDXG-10A-01D	DNA	EFO	SRS380860		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PATDXG-10A-01D Catch-130986 library	PAIRED	GENOMIC	WXS	Hybrid Selection	152	59.3902838888889	Catch-130986	SRX211842	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PATDXG-10A-01D Catch-130986 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079CACXX120123.7.AGCAATTC.C829.TARGET-30-PATDXG-10A-01D.1.bam	SRR637247	@dbgap@:reads/SRP012002/SRS380860/SRX211842/SRR637247/SRR637247.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PATDXG.seg.txt	3
TARGET-30-PATDXG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATDXG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATDXG-10A-01D	DNA	EFO	SRS380860		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PATDXG-10A-01D Catch-130986 library	PAIRED	GENOMIC	WXS	Hybrid Selection	152	59.3902838888889	Catch-130986	SRX211842	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PATDXG-10A-01D Catch-130986 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079CACXX120123.7.AGCAATTC.C829.TARGET-30-PATDXG-10A-01D.1.bam	SRR637247	@dbgap@:reads/SRP012002/SRS380860/SRX211842/SRR637247/SRR637247.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PATEKG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATEKG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATEKG-01A-01D	DNA	EFO	SRS380838		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PATEKG-01A-01D Catch-131013 library	PAIRED	GENOMIC	WXS	Hybrid Selection	153	61.9843016666667	Catch-131013	SRX211750	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PATEKG-01A-01D Catch-131013 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0703ACXX120123.8.GTCGCCTT.C829.TARGET-30-PATEKG-01A-01D.1.bam	SRR637733	@dbgap@:reads/SRP012002/SRS380838/SRX211750/SRR637733/SRR637733.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PATEKG.seg.txt	3
TARGET-30-PATEKG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATEKG-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATEKG-01A-01D	DNA	EFO	SRS380838		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PATEKG-01A-01D Catch-131013 library	PAIRED	GENOMIC	WXS	Hybrid Selection	153	61.9843016666667	Catch-131013	SRX211750	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PATEKG-01A-01D Catch-131013 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0703ACXX120123.8.GTCGCCTT.C829.TARGET-30-PATEKG-01A-01D.1.bam	SRR637733	@dbgap@:reads/SRP012002/SRS380838/SRX211750/SRR637733/SRR637733.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PATEKG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATEKG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATEKG-10A-01D	DNA	EFO	SRS380930		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PATEKG-10A-01D Catch-130971 library	PAIRED	GENOMIC	WXS	Hybrid Selection	148	63.2992255555556	Catch-130971	SRX212033	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-25	TARGET-30-PATEKG-10A-01D Catch-130971 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0JTGACXX120125.4.GAAGGAAG.C829.TARGET-30-PATEKG-10A-01D.1.bam	SRR638666	@dbgap@:reads/SRP012002/SRS380930/SRX212033/SRR638666/SRR638666.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PATEKG.seg.txt	3
TARGET-30-PATEKG	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATEKG-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATEKG-10A-01D	DNA	EFO	SRS380930		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PATEKG-10A-01D Catch-130971 library	PAIRED	GENOMIC	WXS	Hybrid Selection	148	63.2992255555556	Catch-130971	SRX212033	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-25	TARGET-30-PATEKG-10A-01D Catch-130971 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0JTGACXX120125.4.GAAGGAAG.C829.TARGET-30-PATEKG-10A-01D.1.bam	SRR638666	@dbgap@:reads/SRP012002/SRS380930/SRX212033/SRR638666/SRR638666.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PATEPF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATEPF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATEPF-01A-01D	DNA	EFO	SRS375987		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PATEPF-01A-01D Catch-130981 library	PAIRED	GENOMIC	WXS	Hybrid Selection	150	59.0177533333333	Catch-130981	SRX211861	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PATEPF-01A-01D Catch-130981 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0703ACXX120123.1.TATCTGCC.C829.TARGET-30-PATEPF-01A-01D.1.bam	SRR637319	@dbgap@:reads/SRP012002/SRS375987/SRX211861/SRR637319/SRR637319.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PATEPF.seg.txt	3
TARGET-30-PATEPF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATEPF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATEPF-01A-01D	DNA	EFO	SRS375987		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PATEPF-01A-01D Catch-130981 library	PAIRED	GENOMIC	WXS	Hybrid Selection	150	59.0177533333333	Catch-130981	SRX211861	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PATEPF-01A-01D Catch-130981 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0703ACXX120123.1.TATCTGCC.C829.TARGET-30-PATEPF-01A-01D.1.bam	SRR637319	@dbgap@:reads/SRP012002/SRS375987/SRX211861/SRR637319/SRR637319.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PATEPF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATEPF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATEPF-10A-01D	DNA	EFO	SRS375986		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PATEPF-10A-01D Catch-131017 library	PAIRED	GENOMIC	WXS	Hybrid Selection	140	58.8475366666667	Catch-131017	SRX211840	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PATEPF-10A-01D Catch-131017 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0703ACXX120123.1.GCCTAGCC.C829.TARGET-30-PATEPF-10A-01D.1.bam	SRR637229	@dbgap@:reads/SRP012002/SRS375986/SRX211840/SRR637229/SRR637229.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PATEPF.seg.txt	3
TARGET-30-PATEPF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATEPF-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATEPF-10A-01D	DNA	EFO	SRS375986		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PATEPF-10A-01D Catch-131017 library	PAIRED	GENOMIC	WXS	Hybrid Selection	140	58.8475366666667	Catch-131017	SRX211840	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PATEPF-10A-01D Catch-131017 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0703ACXX120123.1.GCCTAGCC.C829.TARGET-30-PATEPF-10A-01D.1.bam	SRR637229	@dbgap@:reads/SRP012002/SRS375986/SRX211840/SRR637229/SRR637229.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PATESI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATESI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATESI-01A-01D	DNA	EFO	SRS375909		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PATESI-01A-01D Catch-130965 library	PAIRED	GENOMIC	WXS	Hybrid Selection	152	57.9830755555556	Catch-130965	SRX211950	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-25	TARGET-30-PATESI-01A-01D Catch-130965 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0JTGACXX120125.8.GACAGTAA.C829.TARGET-30-PATESI-01A-01D.1.bam	SRR638205	@dbgap@:reads/SRP012002/SRS375909/SRX211950/SRR638205/SRR638205.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PATESI.seg.txt	3
TARGET-30-PATESI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATESI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATESI-01A-01D	DNA	EFO	SRS375909		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PATESI-01A-01D Catch-130965 library	PAIRED	GENOMIC	WXS	Hybrid Selection	152	57.9830755555556	Catch-130965	SRX211950	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-25	TARGET-30-PATESI-01A-01D Catch-130965 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0JTGACXX120125.8.GACAGTAA.C829.TARGET-30-PATESI-01A-01D.1.bam	SRR638205	@dbgap@:reads/SRP012002/SRS375909/SRX211950/SRR638205/SRR638205.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PATESI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATESI-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATESI-10A-01D	DNA	EFO	SRS375908		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PATESI-10A-01D Catch-130968 library	PAIRED	GENOMIC	WXS	Hybrid Selection	150	59.7330227777778	Catch-130968	SRX211863	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PATESI-10A-01D Catch-130968 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079CACXX120123.6.CTGTAATC.C829.TARGET-30-PATESI-10A-01D.1.bam	SRR637337	@dbgap@:reads/SRP012002/SRS375908/SRX211863/SRR637337/SRR637337.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PATESI.seg.txt	3
TARGET-30-PATESI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATESI-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATESI-10A-01D	DNA	EFO	SRS375908		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PATESI-10A-01D Catch-130968 library	PAIRED	GENOMIC	WXS	Hybrid Selection	150	59.7330227777778	Catch-130968	SRX211863	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PATESI-10A-01D Catch-130968 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079CACXX120123.6.CTGTAATC.C829.TARGET-30-PATESI-10A-01D.1.bam	SRR637337	@dbgap@:reads/SRP012002/SRS375908/SRX211863/SRR637337/SRR637337.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PATFCY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFCY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFCY-01A-01D	DNA	EFO	SRS375985		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PATFCY-01A-01D Catch-130957 library	PAIRED	GENOMIC	WXS	Hybrid Selection	158	65.0667311111111	Catch-130957	SRX211980	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-25	TARGET-30-PATFCY-01A-01D Catch-130957 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0JTGACXX120125.4.CCAACATT.C829.TARGET-30-PATFCY-01A-01D.1.bam	SRR638550	@dbgap@:reads/SRP012002/SRS375985/SRX211980/SRR638550/SRR638550.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PATFCY.seg.txt	3
TARGET-30-PATFCY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFCY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFCY-01A-01D	DNA	EFO	SRS375985		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PATFCY-01A-01D Catch-130957 library	PAIRED	GENOMIC	WXS	Hybrid Selection	158	65.0667311111111	Catch-130957	SRX211980	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-25	TARGET-30-PATFCY-01A-01D Catch-130957 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0JTGACXX120125.4.CCAACATT.C829.TARGET-30-PATFCY-01A-01D.1.bam	SRR638550	@dbgap@:reads/SRP012002/SRS375985/SRX211980/SRR638550/SRR638550.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PATFCY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFCY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFCY-10A-01D	DNA	EFO	SRS375984		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PATFCY-10A-01D Catch-130947 library	PAIRED	GENOMIC	WXS	Hybrid Selection	158	65.0720272222222	Catch-130947	SRX211964	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PATFCY-10A-01D Catch-130947 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079CACXX120123.8.AACAATGG.C829.TARGET-30-PATFCY-10A-01D.1.bam	SRR638615	@dbgap@:reads/SRP012002/SRS375984/SRX211964/SRR638615/SRR638615.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PATFCY.seg.txt	3
TARGET-30-PATFCY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFCY-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFCY-10A-01D	DNA	EFO	SRS375984		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PATFCY-10A-01D Catch-130947 library	PAIRED	GENOMIC	WXS	Hybrid Selection	158	65.0720272222222	Catch-130947	SRX211964	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PATFCY-10A-01D Catch-130947 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079CACXX120123.8.AACAATGG.C829.TARGET-30-PATFCY-10A-01D.1.bam	SRR638615	@dbgap@:reads/SRP012002/SRS375984/SRX211964/SRR638615/SRR638615.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PATFIN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFIN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFIN-01A-01D	DNA	EFO	SRS380884		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PATFIN-01A-01D Catch-130962 library	PAIRED	GENOMIC	WXS	Hybrid Selection	157	62.0109477777778	Catch-130962	SRX211948	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PATFIN-01A-01D Catch-130962 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079CACXX120123.6.GCACATCT.C829.TARGET-30-PATFIN-01A-01D.1.bam	SRR638422	@dbgap@:reads/SRP012002/SRS380884/SRX211948/SRR638422/SRR638422.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PATFIN.seg.txt	3
TARGET-30-PATFIN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFIN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFIN-01A-01D	DNA	EFO	SRS380884		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PATFIN-01A-01D Catch-130962 library	PAIRED	GENOMIC	WXS	Hybrid Selection	157	62.0109477777778	Catch-130962	SRX211948	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PATFIN-01A-01D Catch-130962 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079CACXX120123.6.GCACATCT.C829.TARGET-30-PATFIN-01A-01D.1.bam	SRR638422	@dbgap@:reads/SRP012002/SRS380884/SRX211948/SRR638422/SRR638422.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PATFIN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFIN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFIN-10A-01D	DNA	EFO	SRS380859		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PATFIN-10A-01D Catch-130954 library	PAIRED	GENOMIC	WXS	Hybrid Selection	158	61.4023061111111	Catch-130954	SRX211837	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PATFIN-10A-01D Catch-130954 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0703ACXX120123.1.GTCTGATG.C829.TARGET-30-PATFIN-10A-01D.1.bam	SRR637877	@dbgap@:reads/SRP012002/SRS380859/SRX211837/SRR637877/SRR637877.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PATFIN.seg.txt	3
TARGET-30-PATFIN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFIN-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFIN-10A-01D	DNA	EFO	SRS380859		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PATFIN-10A-01D Catch-130954 library	PAIRED	GENOMIC	WXS	Hybrid Selection	158	61.4023061111111	Catch-130954	SRX211837	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PATFIN-10A-01D Catch-130954 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0703ACXX120123.1.GTCTGATG.C829.TARGET-30-PATFIN-10A-01D.1.bam	SRR637877	@dbgap@:reads/SRP012002/SRS380859/SRX211837/SRR637877/SRR637877.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PATFXV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFXV-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFXV-01A-01D	DNA	EFO	SRS375983		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PATFXV-01A-01D Catch-130974 library	PAIRED	GENOMIC	WXS	Hybrid Selection	152	60.4176122222222	Catch-130974	SRX211974	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-25	TARGET-30-PATFXV-01A-01D Catch-130974 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0JTGACXX120125.8.TGCTCGAC.C829.TARGET-30-PATFXV-01A-01D.1.bam	SRR638313	@dbgap@:reads/SRP012002/SRS375983/SRX211974/SRR638313/SRR638313.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PATFXV.seg.txt	3
TARGET-30-PATFXV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFXV-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFXV-01A-01D	DNA	EFO	SRS375983		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PATFXV-01A-01D Catch-130974 library	PAIRED	GENOMIC	WXS	Hybrid Selection	152	60.4176122222222	Catch-130974	SRX211974	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-25	TARGET-30-PATFXV-01A-01D Catch-130974 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0JTGACXX120125.8.TGCTCGAC.C829.TARGET-30-PATFXV-01A-01D.1.bam	SRR638313	@dbgap@:reads/SRP012002/SRS375983/SRX211974/SRR638313/SRR638313.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PATFXV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFXV-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFXV-10A-01D	DNA	EFO	SRS375982		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PATFXV-10A-01D Catch-131016 library	PAIRED	GENOMIC	WXS	Hybrid Selection	150	57.4762433333333	Catch-131016	SRX211943	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PATFXV-10A-01D Catch-131016 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0703ACXX120123.2.GACCAGGA.C829.TARGET-30-PATFXV-10A-01D.1.bam	SRR638187	@dbgap@:reads/SRP012002/SRS375982/SRX211943/SRR638187/SRR638187.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PATFXV.seg.txt	3
TARGET-30-PATFXV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATFXV-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATFXV-10A-01D	DNA	EFO	SRS375982		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PATFXV-10A-01D Catch-131016 library	PAIRED	GENOMIC	WXS	Hybrid Selection	150	57.4762433333333	Catch-131016	SRX211943	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PATFXV-10A-01D Catch-131016 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0703ACXX120123.2.GACCAGGA.C829.TARGET-30-PATFXV-10A-01D.1.bam	SRR638187	@dbgap@:reads/SRP012002/SRS375982/SRX211943/SRR638187/SRR638187.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PATGLU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGLU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGLU-01A-01D	DNA	EFO	SRS375965		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PATGLU-01A-01D Catch-130948 library	PAIRED	GENOMIC	WXS	Hybrid Selection	159	63.4026261111111	Catch-130948	SRX211787	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PATGLU-01A-01D Catch-130948 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0703ACXX120123.3.ACTGTATC.C829.TARGET-30-PATGLU-01A-01D.1.bam	SRR637751	@dbgap@:reads/SRP012002/SRS375965/SRX211787/SRR637751/SRR637751.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PATGLU.seg.txt	3
TARGET-30-PATGLU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGLU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGLU-01A-01D	DNA	EFO	SRS375965		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PATGLU-01A-01D Catch-130948 library	PAIRED	GENOMIC	WXS	Hybrid Selection	159	63.4026261111111	Catch-130948	SRX211787	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PATGLU-01A-01D Catch-130948 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0703ACXX120123.3.ACTGTATC.C829.TARGET-30-PATGLU-01A-01D.1.bam	SRR637751	@dbgap@:reads/SRP012002/SRS375965/SRX211787/SRR637751/SRR637751.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PATGLU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGLU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGLU-10A-01D	DNA	EFO	SRS375964		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PATGLU-10A-01D Catch-130979 library	PAIRED	GENOMIC	WXS	Hybrid Selection	149	59.9454527777778	Catch-130979	SRX211832	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PATGLU-10A-01D Catch-130979 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0703ACXX120123.3.CCTTCGCA.C829.TARGET-30-PATGLU-10A-01D.1.bam	SRR638003	@dbgap@:reads/SRP012002/SRS375964/SRX211832/SRR638003/SRR638003.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PATGLU.seg.txt	3
TARGET-30-PATGLU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGLU-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGLU-10A-01D	DNA	EFO	SRS375964		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PATGLU-10A-01D Catch-130979 library	PAIRED	GENOMIC	WXS	Hybrid Selection	149	59.9454527777778	Catch-130979	SRX211832	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PATGLU-10A-01D Catch-130979 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0703ACXX120123.3.CCTTCGCA.C829.TARGET-30-PATGLU-10A-01D.1.bam	SRR638003	@dbgap@:reads/SRP012002/SRS375964/SRX211832/SRR638003/SRR638003.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PATGWT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGWT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGWT-01A-01D	DNA	EFO	SRS380862		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PATGWT-01A-01D Catch-130966 library	PAIRED	GENOMIC	WXS	Hybrid Selection	148	57.6016705555556	Catch-130966	SRX211849	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-25	TARGET-30-PATGWT-01A-01D Catch-130966 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0JTGACXX120125.8.TTACGCAC.C829.TARGET-30-PATGWT-01A-01D.1.bam	SRR637967	@dbgap@:reads/SRP012002/SRS380862/SRX211849/SRR637967/SRR637967.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PATGWT.seg.txt	3
TARGET-30-PATGWT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGWT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGWT-01A-01D	DNA	EFO	SRS380862		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PATGWT-01A-01D Catch-130966 library	PAIRED	GENOMIC	WXS	Hybrid Selection	148	57.6016705555556	Catch-130966	SRX211849	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-25	TARGET-30-PATGWT-01A-01D Catch-130966 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0JTGACXX120125.8.TTACGCAC.C829.TARGET-30-PATGWT-01A-01D.1.bam	SRR637967	@dbgap@:reads/SRP012002/SRS380862/SRX211849/SRR637967/SRR637967.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PATGWT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGWT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGWT-10A-01D	DNA	EFO	SRS380869		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PATGWT-10A-01D Catch-130977 library	PAIRED	GENOMIC	WXS	Hybrid Selection	156	60.7359172222222	Catch-130977	SRX211889	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PATGWT-10A-01D Catch-130977 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079CACXX120123.3.CCTATGCC.C829.TARGET-30-PATGWT-10A-01D.1.bam	SRR637535	@dbgap@:reads/SRP012002/SRS380869/SRX211889/SRR637535/SRR637535.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PATGWT.seg.txt	3
TARGET-30-PATGWT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATGWT-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATGWT-10A-01D	DNA	EFO	SRS380869		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PATGWT-10A-01D Catch-130977 library	PAIRED	GENOMIC	WXS	Hybrid Selection	156	60.7359172222222	Catch-130977	SRX211889	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PATGWT-10A-01D Catch-130977 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079CACXX120123.3.CCTATGCC.C829.TARGET-30-PATGWT-10A-01D.1.bam	SRR637535	@dbgap@:reads/SRP012002/SRS380869/SRX211889/SRR637535/SRR637535.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PATHVK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATHVK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATHVK-01A-01D	DNA	EFO	SRS375967		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PATHVK-01A-01D Catch-130967 library	PAIRED	GENOMIC	WXS	Hybrid Selection	153	60.0753827777778	Catch-130967	SRX211753	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PATHVK-01A-01D Catch-130967 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079CACXX120123.1.GTCATCTA.C829.TARGET-30-PATHVK-01A-01D.1.bam	SRR637715	@dbgap@:reads/SRP012002/SRS375967/SRX211753/SRR637715/SRR637715.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PATHVK.seg.txt	3
TARGET-30-PATHVK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATHVK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATHVK-01A-01D	DNA	EFO	SRS375967		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PATHVK-01A-01D Catch-130967 library	PAIRED	GENOMIC	WXS	Hybrid Selection	153	60.0753827777778	Catch-130967	SRX211753	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PATHVK-01A-01D Catch-130967 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079CACXX120123.1.GTCATCTA.C829.TARGET-30-PATHVK-01A-01D.1.bam	SRR637715	@dbgap@:reads/SRP012002/SRS375967/SRX211753/SRR637715/SRR637715.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PATHVK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATHVK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATHVK-10A-01D	DNA	EFO	SRS375966		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PATHVK-10A-01D Catch-130994 library	PAIRED	GENOMIC	WXS	Hybrid Selection	150	56.2176377777778	Catch-130994	SRX211959	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PATHVK-10A-01D Catch-130994 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0703ACXX120123.1.ATTATCAA.C829.TARGET-30-PATHVK-10A-01D.1.bam	SRR638241	@dbgap@:reads/SRP012002/SRS375966/SRX211959/SRR638241/SRR638241.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PATHVK.seg.txt	3
TARGET-30-PATHVK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATHVK-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATHVK-10A-01D	DNA	EFO	SRS375966		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PATHVK-10A-01D Catch-130994 library	PAIRED	GENOMIC	WXS	Hybrid Selection	150	56.2176377777778	Catch-130994	SRX211959	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PATHVK-10A-01D Catch-130994 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0703ACXX120123.1.ATTATCAA.C829.TARGET-30-PATHVK-10A-01D.1.bam	SRR638241	@dbgap@:reads/SRP012002/SRS375966/SRX211959/SRR638241/SRR638241.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PATILE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATILE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATILE-01A-01D	DNA	EFO	SRS379866		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PATILE-01A-01D Catch-131180 library	PAIRED	GENOMIC	WXS	Hybrid Selection	153	61.5747159090909	Catch-131180	SRX210516	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PATILE-01A-01D Catch-131180 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DF6ACXX120206.5.CCTACCAT.C829.TARGET-30-PATILE-01A-01D.1.bam	SRR632719	@dbgap@:reads/SRP012002/SRS379866/SRX210516/SRR632719/SRR632719.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PATILE.seg.txt	3
TARGET-30-PATILE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATILE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATILE-01A-01D	DNA	EFO	SRS379866		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PATILE-01A-01D Catch-131180 library	PAIRED	GENOMIC	WXS	Hybrid Selection	153	61.5747159090909	Catch-131180	SRX210516	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-06	TARGET-30-PATILE-01A-01D Catch-131180 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0DF6ACXX120206.5.CCTACCAT.C829.TARGET-30-PATILE-01A-01D.1.bam	SRR632719	@dbgap@:reads/SRP012002/SRS379866/SRX210516/SRR632719/SRR632719.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PATILE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATILE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATILE-10A-01D	DNA	EFO	SRS380199		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PATILE-10A-01D Catch-131149 library	PAIRED	GENOMIC	WXS	Hybrid Selection	160	62.4887104545455	Catch-131149	SRX211174	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-02	TARGET-30-PATILE-10A-01D Catch-131149 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0KW1ACXX120202.2.TATCTGCC.C829.TARGET-30-PATILE-10A-01D.1.bam	SRR636064	@dbgap@:reads/SRP012002/SRS380199/SRX211174/SRR636064/SRR636064.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PATILE.seg.txt	3
TARGET-30-PATILE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATILE-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATILE-10A-01D	DNA	EFO	SRS380199		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PATILE-10A-01D Catch-131149 library	PAIRED	GENOMIC	WXS	Hybrid Selection	160	62.4887104545455	Catch-131149	SRX211174	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-02-02	TARGET-30-PATILE-10A-01D Catch-131149 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	D0KW1ACXX120202.2.TATCTGCC.C829.TARGET-30-PATILE-10A-01D.1.bam	SRR636064	@dbgap@:reads/SRP012002/SRS380199/SRX211174/SRR636064/SRR636064.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PATINJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATINJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATINJ-01A-01D	DNA	EFO	SRS380880		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PATINJ-01A-01D Catch-130952 library	PAIRED	GENOMIC	WXS	Hybrid Selection	158	62.1484766666667	Catch-130952	SRX211930	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PATINJ-01A-01D Catch-130952 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0703ACXX120123.8.TCTGGCGA.C829.TARGET-30-PATINJ-01A-01D.1.bam	SRR638404	@dbgap@:reads/SRP012002/SRS380880/SRX211930/SRR638404/SRR638404.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PATINJ.seg.txt	3
TARGET-30-PATINJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATINJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATINJ-01A-01D	DNA	EFO	SRS380880		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PATINJ-01A-01D Catch-130952 library	PAIRED	GENOMIC	WXS	Hybrid Selection	158	62.1484766666667	Catch-130952	SRX211930	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PATINJ-01A-01D Catch-130952 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C0703ACXX120123.8.TCTGGCGA.C829.TARGET-30-PATINJ-01A-01D.1.bam	SRR638404	@dbgap@:reads/SRP012002/SRS380880/SRX211930/SRR638404/SRR638404.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
TARGET-30-PATINJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATINJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATINJ-10A-01D	DNA	EFO	SRS380834		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PATINJ-10A-01D Catch-131028 library	PAIRED	GENOMIC	WXS	Hybrid Selection	154	62.6997727777778	Catch-131028	SRX211724	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PATINJ-10A-01D Catch-131028 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079CACXX120123.2.TATCCAGG.C829.TARGET-30-PATINJ-10A-01D.1.bam	SRR636997	@dbgap@:reads/SRP012002/SRS380834/SRX211724/SRR636997/SRR636997.sra	2	HG19_Broad_variant	broadinstitute.org:Protocol:WXS-CnvSegment:01	TARGET-30-PATINJ.seg.txt	3
TARGET-30-PATINJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Neuroblastoma	NCIt	Discovery	TARGET-30-PATINJ-10A	organism part	EFO	Peripheral Blood	NCIt	"Blood Derived Normal"	nationwidechildrens.org:Protocol:DNA-Extraction-Qiagen-GenomicTips:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-30-PATINJ-10A-01D	DNA	EFO	SRS380834		broadinstitute.org:Protocol:WXS-LibraryPrep-Illumina:01	broadinstitute.org:Protocol:WXS-ExomeCapture-Agilent-WholeExome1.1RefSeqPlus3Boosters:01	Broad Institute	TARGET-30-PATINJ-10A-01D Catch-131028 library	PAIRED	GENOMIC	WXS	Hybrid Selection	154	62.6997727777778	Catch-131028	SRX211724	"Illumina sequencing of Homo sapiens via hybrid selection"	broadinstitute.org:Protocol:WXS-Sequence-Illumina-HiSeq2000:01	Broad	2012-01-23	TARGET-30-PATINJ-10A-01D Catch-131028 run	sequencing assay	EFO	152	broadinstitute.org:Protocol:WXS-BaseCall-Illumina:01	GAPipeline RTA1.12.4.2	broadinstitute.org:Protocol:WXS-ReadAlign:01	C079CACXX120123.2.TATCCAGG.C829.TARGET-30-PATINJ-10A-01D.1.bam	SRR636997	@dbgap@:reads/SRP012002/SRS380834/SRX211724/SRR636997/SRR636997.sra	2	HG19_Broad_variant	stjude.org:Protocol:WXS-VariantCall-Bambino-DToxoG:01	stjude.org_TARGET_NBL_WXS_Diagnosis_IlluminaHiSeq_somatic.maf.txt	3
