Source Name	Provider	Material Type	Term Source REF	Characteristics[Organism]	Term Source REF	Characteristics[Sex]	Term Source REF	Characteristics[DiseaseState]	Term Source REF	Comment[OCG Cohort]	Sample Name	Material Type	Term Source REF	Characteristics[OrganismPart]	Term Source REF	Description	Protocol REF	Performer	Extract Name	Material Type	Term Source REF	Comment[SRA_SAMPLE]	Protocol REF	Performer	Extract Name	Comment[LIBRARY_LAYOUT]	Comment[LIBRARY_SOURCE]	Comment[LIBRARY_STRATEGY]	Comment[LIBRARY_SELECTION]	Comment[LIBRARY_NAME]	Comment[SRA_EXPERIMENT]	Description	Protocol REF	Performer	Date	Assay Name	Technology Type	Term Source REF	Comment[SPOT_LENGTH]	Protocol REF	Parameter Value[Software Versions]	Protocol REF	Derived Array Data File	Comment[SRA_RUN]	Comment[SRA_FILE_URI]	Comment[OCG Data Level]	Comment[ASSEMBLY_NAME]	Protocol REF	Derived Array Data File	Comment[OCG Data Level]	Comment[miRBase Version]
TARGET-15-PAREAT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Mixed Phenotype Acute Leukemia	NCIt	Discovery	TARGET-15-PAREAT-09B	organism part	EFO	Bone Marrow	NCIt	"Primary Blood Derived Cancer - Bone Marrow"	stjude.org:Protocol:RNA-Extraction-TRIzol:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-PAREAT-09B-01R	RNA	EFO	SRS1761096	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-PAREAT-09B-01R m18840 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m18840	SRX3181465	"miRNA-Seq analysis of mixed phenotype acute leukemia sample TARGET-15-PAREAT-09B-01R using Illumina NextSeq 500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-NextSeq500:01	BCCA	2017-08-24	TARGET-15-PAREAT-09B-01R m18840 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 2.4.11	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	m18840_4_lanes_dupsFlagged_reheadered.bam	SRR6127582	@dbgap@:reads/SRP011999/SRS1761096/SRX3181465/SRR6127582/SRR6127582.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-15-PAREAT-09B-01R.isoform.quantification.txt	3	20
TARGET-15-PAREAT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Mixed Phenotype Acute Leukemia	NCIt	Discovery	TARGET-15-PAREAT-09B	organism part	EFO	Bone Marrow	NCIt	"Primary Blood Derived Cancer - Bone Marrow"	stjude.org:Protocol:RNA-Extraction-TRIzol:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-PAREAT-09B-01R	RNA	EFO	SRS1761096	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-PAREAT-09B-01R m18840 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m18840	SRX3181465	"miRNA-Seq analysis of mixed phenotype acute leukemia sample TARGET-15-PAREAT-09B-01R using Illumina NextSeq 500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-NextSeq500:01	BCCA	2017-08-24	TARGET-15-PAREAT-09B-01R m18840 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 2.4.11	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	m18840_4_lanes_dupsFlagged_reheadered.bam	SRR6127582	@dbgap@:reads/SRP011999/SRS1761096/SRX3181465/SRR6127582/SRR6127582.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-15-PAREAT-09B-01R.mirna.quantification.txt	3	20
TARGET-15-PARWPU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Mixed Phenotype Acute Leukemia	NCIt	Discovery	TARGET-15-PARWPU-09B	organism part	EFO	Bone Marrow	NCIt	"Primary Blood Derived Cancer - Bone Marrow"	stjude.org:Protocol:RNA-Extraction-TRIzol:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-PARWPU-09B-01R	RNA	EFO	SRS1761061	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-PARWPU-09B-01R m18431 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m18431	SRX2884712	"miRNA-Seq analysis of mixed phenotype acute leukemia sample TARGET-15-PARWPU-09B-01R using Illumina NextSeq 500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-NextSeq500:01	BCCA	2017-03-29	TARGET-15-PARWPU-09B-01R m18431 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 2.4.11	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	m18431_4_lanes_dupsFlagged_reheadered.bam	SRR5647110	@dbgap@:reads/SRP011999/SRS1761061/SRX2884712/SRR5647110/SRR5647110.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-15-PARWPU-09B-01R.isoform.quantification.txt	3	20
TARGET-15-PARWPU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Mixed Phenotype Acute Leukemia	NCIt	Discovery	TARGET-15-PARWPU-09B	organism part	EFO	Bone Marrow	NCIt	"Primary Blood Derived Cancer - Bone Marrow"	stjude.org:Protocol:RNA-Extraction-TRIzol:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-PARWPU-09B-01R	RNA	EFO	SRS1761061	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-PARWPU-09B-01R m18431 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m18431	SRX2884712	"miRNA-Seq analysis of mixed phenotype acute leukemia sample TARGET-15-PARWPU-09B-01R using Illumina NextSeq 500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-NextSeq500:01	BCCA	2017-03-29	TARGET-15-PARWPU-09B-01R m18431 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 2.4.11	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	m18431_4_lanes_dupsFlagged_reheadered.bam	SRR5647110	@dbgap@:reads/SRP011999/SRS1761061/SRX2884712/SRR5647110/SRR5647110.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-15-PARWPU-09B-01R.mirna.quantification.txt	3	20
TARGET-15-PASZVW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Mixed Phenotype Acute Leukemia	NCIt	Discovery	TARGET-15-PASZVW-09B	organism part	EFO	Bone Marrow	NCIt	"Primary Blood Derived Cancer - Bone Marrow"	stjude.org:Protocol:RNA-Extraction-TRIzol:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-PASZVW-09B-01R	RNA	EFO	SRS1761057	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-PASZVW-09B-01R m18846 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m18846	SRX3181470	"miRNA-Seq analysis of mixed phenotype acute leukemia sample TARGET-15-PASZVW-09B-01R using Illumina NextSeq 500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-NextSeq500:01	BCCA	2017-08-24	TARGET-15-PASZVW-09B-01R m18846 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 2.4.11	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	m18846_4_lanes_dupsFlagged_reheadered.bam	SRR6031114	@dbgap@:reads/SRP011999/SRS1761057/SRX3181470/SRR6031114/SRR6031114.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-15-PASZVW-09B-01R.isoform.quantification.txt	3	20
TARGET-15-PASZVW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Mixed Phenotype Acute Leukemia	NCIt	Discovery	TARGET-15-PASZVW-09B	organism part	EFO	Bone Marrow	NCIt	"Primary Blood Derived Cancer - Bone Marrow"	stjude.org:Protocol:RNA-Extraction-TRIzol:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-PASZVW-09B-01R	RNA	EFO	SRS1761057	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-PASZVW-09B-01R m18846 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m18846	SRX3181470	"miRNA-Seq analysis of mixed phenotype acute leukemia sample TARGET-15-PASZVW-09B-01R using Illumina NextSeq 500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-NextSeq500:01	BCCA	2017-08-24	TARGET-15-PASZVW-09B-01R m18846 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 2.4.11	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	m18846_4_lanes_dupsFlagged_reheadered.bam	SRR6031114	@dbgap@:reads/SRP011999/SRS1761057/SRX3181470/SRR6031114/SRR6031114.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-15-PASZVW-09B-01R.mirna.quantification.txt	3	20
TARGET-15-PAVFTF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Mixed Phenotype Acute Leukemia	NCIt	Discovery	TARGET-15-PAVFTF-09B	organism part	EFO	Bone Marrow	NCIt	"Primary Blood Derived Cancer - Bone Marrow"	stjude.org:Protocol:RNA-Extraction-TRIzol:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-PAVFTF-09B-01R	RNA	EFO	SRS1761075	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-PAVFTF-09B-01R m18848 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m18848	SRX3181467	"miRNA-Seq analysis of mixed phenotype acute leukemia sample TARGET-15-PAVFTF-09B-01R using Illumina NextSeq 500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-NextSeq500:01	BCCA	2017-08-24	TARGET-15-PAVFTF-09B-01R m18848 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 2.4.11	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	m18848_4_lanes_dupsFlagged_reheadered.bam	SRR6031129	@dbgap@:reads/SRP011999/SRS1761075/SRX3181467/SRR6031129/SRR6031129.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-15-PAVFTF-09B-01R.isoform.quantification.txt	3	20
TARGET-15-PAVFTF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Mixed Phenotype Acute Leukemia	NCIt	Discovery	TARGET-15-PAVFTF-09B	organism part	EFO	Bone Marrow	NCIt	"Primary Blood Derived Cancer - Bone Marrow"	stjude.org:Protocol:RNA-Extraction-TRIzol:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-PAVFTF-09B-01R	RNA	EFO	SRS1761075	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-PAVFTF-09B-01R m18848 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m18848	SRX3181467	"miRNA-Seq analysis of mixed phenotype acute leukemia sample TARGET-15-PAVFTF-09B-01R using Illumina NextSeq 500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-NextSeq500:01	BCCA	2017-08-24	TARGET-15-PAVFTF-09B-01R m18848 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 2.4.11	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	m18848_4_lanes_dupsFlagged_reheadered.bam	SRR6031129	@dbgap@:reads/SRP011999/SRS1761075/SRX3181467/SRR6031129/SRR6031129.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-15-PAVFTF-09B-01R.mirna.quantification.txt	3	20
TARGET-15-SJMPAL011914	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Mixed Phenotype Acute Leukemia	NCIt	Discovery	TARGET-15-SJMPAL011914-09B	organism part	EFO	Bone Marrow	NCIt	"Primary Blood Derived Cancer - Bone Marrow"	stjude.org:Protocol:RNA-Extraction-TRIzol:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL011914-09B-01R	RNA	EFO	SRS1761073	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL011914-09B-01R m18430 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m18430	SRX2884715	"miRNA-Seq analysis of mixed phenotype acute leukemia sample TARGET-15-SJMPAL011914-09B-01R using Illumina NextSeq 500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-NextSeq500:01	BCCA	2017-03-29	TARGET-15-SJMPAL011914-09B-01R m18430 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 2.4.11	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	m18430_4_lanes_dupsFlagged.bam	SRR5647115	@dbgap@:reads/SRP011999/SRS1761073/SRX2884715/SRR5647115/SRR5647115.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-15-SJMPAL011914-09B-01R.isoform.quantification.txt	3	20
TARGET-15-SJMPAL011914	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Mixed Phenotype Acute Leukemia	NCIt	Discovery	TARGET-15-SJMPAL011914-09B	organism part	EFO	Bone Marrow	NCIt	"Primary Blood Derived Cancer - Bone Marrow"	stjude.org:Protocol:RNA-Extraction-TRIzol:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL011914-09B-01R	RNA	EFO	SRS1761073	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL011914-09B-01R m18430 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m18430	SRX2884715	"miRNA-Seq analysis of mixed phenotype acute leukemia sample TARGET-15-SJMPAL011914-09B-01R using Illumina NextSeq 500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-NextSeq500:01	BCCA	2017-03-29	TARGET-15-SJMPAL011914-09B-01R m18430 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 2.4.11	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	m18430_4_lanes_dupsFlagged.bam	SRR5647115	@dbgap@:reads/SRP011999/SRS1761073/SRX2884715/SRR5647115/SRR5647115.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-15-SJMPAL011914-09B-01R.mirna.quantification.txt	3	20
TARGET-15-SJMPAL012419	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Mixed Phenotype Acute Leukemia	NCIt	Discovery	TARGET-15-SJMPAL012419-09B	organism part	EFO	Bone Marrow	NCIt	"Primary Blood Derived Cancer - Bone Marrow"	stjude.org:Protocol:RNA-Extraction-TRIzol:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL012419-09B-01R	RNA	EFO	SRS1761080	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL012419-09B-01R m18417 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m18417	SRX2884718	"miRNA-Seq analysis of mixed phenotype acute leukemia sample TARGET-15-SJMPAL012419-09B-01R using Illumina NextSeq 500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-NextSeq500:01	BCCA	2017-03-29	TARGET-15-SJMPAL012419-09B-01R m18417 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 2.4.11	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	m18417_4_lanes_dupsFlagged.bam	SRR5647107	@dbgap@:reads/SRP011999/SRS1761080/SRX2884718/SRR5647107/SRR5647107.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-15-SJMPAL012419-09B-01R.isoform.quantification.txt	3	20
TARGET-15-SJMPAL012419	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Mixed Phenotype Acute Leukemia	NCIt	Discovery	TARGET-15-SJMPAL012419-09B	organism part	EFO	Bone Marrow	NCIt	"Primary Blood Derived Cancer - Bone Marrow"	stjude.org:Protocol:RNA-Extraction-TRIzol:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL012419-09B-01R	RNA	EFO	SRS1761080	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL012419-09B-01R m18417 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m18417	SRX2884718	"miRNA-Seq analysis of mixed phenotype acute leukemia sample TARGET-15-SJMPAL012419-09B-01R using Illumina NextSeq 500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-NextSeq500:01	BCCA	2017-03-29	TARGET-15-SJMPAL012419-09B-01R m18417 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 2.4.11	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	m18417_4_lanes_dupsFlagged.bam	SRR5647107	@dbgap@:reads/SRP011999/SRS1761080/SRX2884718/SRR5647107/SRR5647107.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-15-SJMPAL012419-09B-01R.mirna.quantification.txt	3	20
TARGET-15-SJMPAL012421	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Mixed Phenotype Acute Leukemia	NCIt	Discovery	TARGET-15-SJMPAL012421-09B	organism part	EFO	Bone Marrow	NCIt	"Primary Blood Derived Cancer - Bone Marrow"	stjude.org:Protocol:RNA-Extraction-TRIzol:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL012421-09B-01R	RNA	EFO	SRS1761084	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL012421-09B-01R m18397 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m18397	SRX2884721	"miRNA-Seq analysis of mixed phenotype acute leukemia sample TARGET-15-SJMPAL012421-09B-01R using Illumina NextSeq 500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-NextSeq500:01	BCCA	2017-03-29	TARGET-15-SJMPAL012421-09B-01R m18397 run	sequencing assay	EFO	24	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 2.4.11	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	m18397_4_lanes_dupsFlagged.bam	SRR5647119	@dbgap@:reads/SRP011999/SRS1761084/SRX2884721/SRR5647119/SRR5647119.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-15-SJMPAL012421-09B-01R.isoform.quantification.txt	3	20
TARGET-15-SJMPAL012421	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Mixed Phenotype Acute Leukemia	NCIt	Discovery	TARGET-15-SJMPAL012421-09B	organism part	EFO	Bone Marrow	NCIt	"Primary Blood Derived Cancer - Bone Marrow"	stjude.org:Protocol:RNA-Extraction-TRIzol:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL012421-09B-01R	RNA	EFO	SRS1761084	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL012421-09B-01R m18397 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m18397	SRX2884721	"miRNA-Seq analysis of mixed phenotype acute leukemia sample TARGET-15-SJMPAL012421-09B-01R using Illumina NextSeq 500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-NextSeq500:01	BCCA	2017-03-29	TARGET-15-SJMPAL012421-09B-01R m18397 run	sequencing assay	EFO	24	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 2.4.11	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	m18397_4_lanes_dupsFlagged.bam	SRR5647119	@dbgap@:reads/SRP011999/SRS1761084/SRX2884721/SRR5647119/SRR5647119.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-15-SJMPAL012421-09B-01R.mirna.quantification.txt	3	20
TARGET-15-SJMPAL016342	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Mixed Phenotype Acute Leukemia	NCIt	Discovery	TARGET-15-SJMPAL016342-09B	organism part	EFO	Bone Marrow	NCIt	"Primary Blood Derived Cancer - Bone Marrow"	stjude.org:Protocol:RNA-Extraction-TRIzol:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL016342-09B-01R	RNA	EFO	SRS1761071	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL016342-09B-01R m18851 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m18851	SRX3181449	"miRNA-Seq analysis of mixed phenotype acute leukemia sample TARGET-15-SJMPAL016342-09B-01R using Illumina NextSeq 500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-NextSeq500:01	BCCA	2017-08-24	TARGET-15-SJMPAL016342-09B-01R m18851 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 2.4.11	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	m18851_4_lanes_dupsFlagged.bam	SRR6031120	@dbgap@:reads/SRP011999/SRS1761071/SRX3181449/SRR6031120/SRR6031120.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-15-SJMPAL016342-09B-01R.isoform.quantification.txt	3	20
TARGET-15-SJMPAL016342	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Mixed Phenotype Acute Leukemia	NCIt	Discovery	TARGET-15-SJMPAL016342-09B	organism part	EFO	Bone Marrow	NCIt	"Primary Blood Derived Cancer - Bone Marrow"	stjude.org:Protocol:RNA-Extraction-TRIzol:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL016342-09B-01R	RNA	EFO	SRS1761071	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL016342-09B-01R m18851 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m18851	SRX3181449	"miRNA-Seq analysis of mixed phenotype acute leukemia sample TARGET-15-SJMPAL016342-09B-01R using Illumina NextSeq 500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-NextSeq500:01	BCCA	2017-08-24	TARGET-15-SJMPAL016342-09B-01R m18851 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 2.4.11	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	m18851_4_lanes_dupsFlagged.bam	SRR6031120	@dbgap@:reads/SRP011999/SRS1761071/SRX3181449/SRR6031120/SRR6031120.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-15-SJMPAL016342-09B-01R.mirna.quantification.txt	3	20
TARGET-15-SJMPAL017975	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Mixed Phenotype Acute Leukemia	NCIt	Discovery	TARGET-15-SJMPAL017975-03B	organism part	EFO	Peripheral Blood	NCIt	"Primary Blood Derived Cancer - Peripheral Blood"	stjude.org:Protocol:RNA-Extraction-TRIzol:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL017975-03B-01R	RNA	EFO	SRS1761081	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL017975-03B-01R m18849 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m18849	SRX3181447	"miRNA-Seq analysis of mixed phenotype acute leukemia sample TARGET-15-SJMPAL017975-03B-01R using Illumina NextSeq 500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-NextSeq500:01	BCCA	2017-08-24	TARGET-15-SJMPAL017975-03B-01R m18849 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 2.4.11	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	m18849_4_lanes_dupsFlagged.bam	SRR6031124	@dbgap@:reads/SRP011999/SRS1761081/SRX3181447/SRR6031124/SRR6031124.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-15-SJMPAL017975-03B-01R.isoform.quantification.txt	3	20
TARGET-15-SJMPAL017975	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Mixed Phenotype Acute Leukemia	NCIt	Discovery	TARGET-15-SJMPAL017975-03B	organism part	EFO	Peripheral Blood	NCIt	"Primary Blood Derived Cancer - Peripheral Blood"	stjude.org:Protocol:RNA-Extraction-TRIzol:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL017975-03B-01R	RNA	EFO	SRS1761081	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL017975-03B-01R m18849 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m18849	SRX3181447	"miRNA-Seq analysis of mixed phenotype acute leukemia sample TARGET-15-SJMPAL017975-03B-01R using Illumina NextSeq 500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-NextSeq500:01	BCCA	2017-08-24	TARGET-15-SJMPAL017975-03B-01R m18849 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 2.4.11	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	m18849_4_lanes_dupsFlagged.bam	SRR6031124	@dbgap@:reads/SRP011999/SRS1761081/SRX3181447/SRR6031124/SRR6031124.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-15-SJMPAL017975-03B-01R.mirna.quantification.txt	3	20
TARGET-15-SJMPAL019076	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Mixed Phenotype Acute Leukemia	NCIt	Discovery	TARGET-15-SJMPAL019076-04B	organism part	EFO	Bone Marrow	NCIt	"Recurrent Blood Derived Cancer - Bone Marrow"	stjude.org:Protocol:RNA-Extraction-TRIzol:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL019076-04B-01R	RNA	EFO	SRS1761091	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL019076-04B-01R m18843 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m18843	SRX3181459	"miRNA-Seq analysis of mixed phenotype acute leukemia sample TARGET-15-SJMPAL019076-04B-01R using Illumina NextSeq 500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-NextSeq500:01	BCCA	2017-08-24	TARGET-15-SJMPAL019076-04B-01R m18843 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 2.4.11	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	m18843_4_lanes_dupsFlagged.bam	SRR6031122	@dbgap@:reads/SRP011999/SRS1761091/SRX3181459/SRR6031122/SRR6031122.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-15-SJMPAL019076-04B-01R.isoform.quantification.txt	3	20
TARGET-15-SJMPAL019076	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Mixed Phenotype Acute Leukemia	NCIt	Discovery	TARGET-15-SJMPAL019076-04B	organism part	EFO	Bone Marrow	NCIt	"Recurrent Blood Derived Cancer - Bone Marrow"	stjude.org:Protocol:RNA-Extraction-TRIzol:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL019076-04B-01R	RNA	EFO	SRS1761091	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL019076-04B-01R m18843 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m18843	SRX3181459	"miRNA-Seq analysis of mixed phenotype acute leukemia sample TARGET-15-SJMPAL019076-04B-01R using Illumina NextSeq 500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-NextSeq500:01	BCCA	2017-08-24	TARGET-15-SJMPAL019076-04B-01R m18843 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 2.4.11	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	m18843_4_lanes_dupsFlagged.bam	SRR6031122	@dbgap@:reads/SRP011999/SRS1761091/SRX3181459/SRR6031122/SRR6031122.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-15-SJMPAL019076-04B-01R.mirna.quantification.txt	3	20
TARGET-15-SJMPAL040028	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Mixed Phenotype Acute Leukemia	NCIt	Discovery	TARGET-15-SJMPAL040028-04B	organism part	EFO	Bone Marrow	NCIt	"Recurrent Blood Derived Cancer - Bone Marrow"	stjude.org:Protocol:RNA-Extraction-TRIzol:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL040028-04B-01R	RNA	EFO	SRS1761059	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL040028-04B-01R m18440 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m18440	SRX2884727	"miRNA-Seq analysis of mixed phenotype acute leukemia sample TARGET-15-SJMPAL040028-04B-01R using Illumina NextSeq 500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-NextSeq500:01	BCCA	2017-03-29	TARGET-15-SJMPAL040028-04B-01R m18440 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 2.4.11	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	m18440_4_lanes_dupsFlagged.bam	SRR5647102	@dbgap@:reads/SRP011999/SRS1761059/SRX2884727/SRR5647102/SRR5647102.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-15-SJMPAL040028-04B-01R.isoform.quantification.txt	3	20
TARGET-15-SJMPAL040028	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Mixed Phenotype Acute Leukemia	NCIt	Discovery	TARGET-15-SJMPAL040028-04B	organism part	EFO	Bone Marrow	NCIt	"Recurrent Blood Derived Cancer - Bone Marrow"	stjude.org:Protocol:RNA-Extraction-TRIzol:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL040028-04B-01R	RNA	EFO	SRS1761059	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL040028-04B-01R m18440 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m18440	SRX2884727	"miRNA-Seq analysis of mixed phenotype acute leukemia sample TARGET-15-SJMPAL040028-04B-01R using Illumina NextSeq 500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-NextSeq500:01	BCCA	2017-03-29	TARGET-15-SJMPAL040028-04B-01R m18440 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 2.4.11	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	m18440_4_lanes_dupsFlagged.bam	SRR5647102	@dbgap@:reads/SRP011999/SRS1761059/SRX2884727/SRR5647102/SRR5647102.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-15-SJMPAL040028-04B-01R.mirna.quantification.txt	3	20
TARGET-15-SJMPAL040036	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Mixed Phenotype Acute Leukemia	NCIt	Discovery	TARGET-15-SJMPAL040036-03B	organism part	EFO	Peripheral Blood	NCIt	"Primary Blood Derived Cancer - Peripheral Blood"	stjude.org:Protocol:RNA-Extraction-TRIzol:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL040036-03B-01R	RNA	EFO	SRS1761078	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL040036-03B-01R m18442 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m18442	SRX2884719	"miRNA-Seq analysis of mixed phenotype acute leukemia sample TARGET-15-SJMPAL040036-03B-01R using Illumina NextSeq 500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-NextSeq500:01	BCCA	2017-03-29	TARGET-15-SJMPAL040036-03B-01R m18442 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 2.4.11	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	m18442_4_lanes_dupsFlagged.bam	SRR5647112	@dbgap@:reads/SRP011999/SRS1761078/SRX2884719/SRR5647112/SRR5647112.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-15-SJMPAL040036-03B-01R.isoform.quantification.txt	3	20
TARGET-15-SJMPAL040036	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Mixed Phenotype Acute Leukemia	NCIt	Discovery	TARGET-15-SJMPAL040036-03B	organism part	EFO	Peripheral Blood	NCIt	"Primary Blood Derived Cancer - Peripheral Blood"	stjude.org:Protocol:RNA-Extraction-TRIzol:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL040036-03B-01R	RNA	EFO	SRS1761078	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL040036-03B-01R m18442 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m18442	SRX2884719	"miRNA-Seq analysis of mixed phenotype acute leukemia sample TARGET-15-SJMPAL040036-03B-01R using Illumina NextSeq 500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-NextSeq500:01	BCCA	2017-03-29	TARGET-15-SJMPAL040036-03B-01R m18442 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 2.4.11	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	m18442_4_lanes_dupsFlagged.bam	SRR5647112	@dbgap@:reads/SRP011999/SRS1761078/SRX2884719/SRR5647112/SRR5647112.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-15-SJMPAL040036-03B-01R.mirna.quantification.txt	3	20
TARGET-15-SJMPAL040037	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Mixed Phenotype Acute Leukemia	NCIt	Discovery	TARGET-15-SJMPAL040037-09B	organism part	EFO	Bone Marrow	NCIt	"Primary Blood Derived Cancer - Bone Marrow"	stjude.org:Protocol:RNA-Extraction-TRIzol:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL040037-09B-01R	RNA	EFO	SRS1761077	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL040037-09B-01R m18852 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m18852	SRX3181453	"miRNA-Seq analysis of mixed phenotype acute leukemia sample TARGET-15-SJMPAL040037-09B-01R using Illumina NextSeq 500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-NextSeq500:01	BCCA	2017-08-24	TARGET-15-SJMPAL040037-09B-01R m18852 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 2.4.11	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	m18852_4_lanes_dupsFlagged.bam	SRR6031121	@dbgap@:reads/SRP011999/SRS1761077/SRX3181453/SRR6031121/SRR6031121.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-15-SJMPAL040037-09B-01R.isoform.quantification.txt	3	20
TARGET-15-SJMPAL040037	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Mixed Phenotype Acute Leukemia	NCIt	Discovery	TARGET-15-SJMPAL040037-09B	organism part	EFO	Bone Marrow	NCIt	"Primary Blood Derived Cancer - Bone Marrow"	stjude.org:Protocol:RNA-Extraction-TRIzol:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL040037-09B-01R	RNA	EFO	SRS1761077	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL040037-09B-01R m18852 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m18852	SRX3181453	"miRNA-Seq analysis of mixed phenotype acute leukemia sample TARGET-15-SJMPAL040037-09B-01R using Illumina NextSeq 500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-NextSeq500:01	BCCA	2017-08-24	TARGET-15-SJMPAL040037-09B-01R m18852 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 2.4.11	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	m18852_4_lanes_dupsFlagged.bam	SRR6031121	@dbgap@:reads/SRP011999/SRS1761077/SRX3181453/SRR6031121/SRR6031121.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-15-SJMPAL040037-09B-01R.mirna.quantification.txt	3	20
TARGET-15-SJMPAL040038	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Mixed Phenotype Acute Leukemia	NCIt	Discovery	TARGET-15-SJMPAL040038-09B	organism part	EFO	Bone Marrow	NCIt	"Primary Blood Derived Cancer - Bone Marrow"	stjude.org:Protocol:RNA-Extraction-TRIzol:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL040038-09B-01R	RNA	EFO	SRS1761066	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL040038-09B-01R m18850 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m18850	SRX3181457	"miRNA-Seq analysis of mixed phenotype acute leukemia sample TARGET-15-SJMPAL040038-09B-01R using Illumina NextSeq 500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-NextSeq500:01	BCCA	2017-08-24	TARGET-15-SJMPAL040038-09B-01R m18850 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 2.4.11	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	m18850_4_lanes_dupsFlagged.bam	SRR6031119	@dbgap@:reads/SRP011999/SRS1761066/SRX3181457/SRR6031119/SRR6031119.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-15-SJMPAL040038-09B-01R.isoform.quantification.txt	3	20
TARGET-15-SJMPAL040038	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Mixed Phenotype Acute Leukemia	NCIt	Discovery	TARGET-15-SJMPAL040038-09B	organism part	EFO	Bone Marrow	NCIt	"Primary Blood Derived Cancer - Bone Marrow"	stjude.org:Protocol:RNA-Extraction-TRIzol:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL040038-09B-01R	RNA	EFO	SRS1761066	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL040038-09B-01R m18850 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m18850	SRX3181457	"miRNA-Seq analysis of mixed phenotype acute leukemia sample TARGET-15-SJMPAL040038-09B-01R using Illumina NextSeq 500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-NextSeq500:01	BCCA	2017-08-24	TARGET-15-SJMPAL040038-09B-01R m18850 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 2.4.11	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	m18850_4_lanes_dupsFlagged.bam	SRR6031119	@dbgap@:reads/SRP011999/SRS1761066/SRX3181457/SRR6031119/SRR6031119.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-15-SJMPAL040038-09B-01R.mirna.quantification.txt	3	20
TARGET-15-SJMPAL040039	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Mixed Phenotype Acute Leukemia	NCIt	Discovery	TARGET-15-SJMPAL040039-09B	organism part	EFO	Bone Marrow	NCIt	"Primary Blood Derived Cancer - Bone Marrow"	stjude.org:Protocol:RNA-Extraction-TRIzol:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL040039-09B-01R	RNA	EFO	SRS1761056	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL040039-09B-01R m18855 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m18855	SRX3181466	"miRNA-Seq analysis of mixed phenotype acute leukemia sample TARGET-15-SJMPAL040039-09B-01R using Illumina NextSeq 500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-NextSeq500:01	BCCA	2017-08-24	TARGET-15-SJMPAL040039-09B-01R m18855 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 2.4.11	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	m18855_4_lanes_dupsFlagged.bam	SRR6031110	@dbgap@:reads/SRP011999/SRS1761056/SRX3181466/SRR6031110/SRR6031110.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-15-SJMPAL040039-09B-01R.isoform.quantification.txt	3	20
TARGET-15-SJMPAL040039	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Mixed Phenotype Acute Leukemia	NCIt	Discovery	TARGET-15-SJMPAL040039-09B	organism part	EFO	Bone Marrow	NCIt	"Primary Blood Derived Cancer - Bone Marrow"	stjude.org:Protocol:RNA-Extraction-TRIzol:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL040039-09B-01R	RNA	EFO	SRS1761056	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL040039-09B-01R m18855 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m18855	SRX3181466	"miRNA-Seq analysis of mixed phenotype acute leukemia sample TARGET-15-SJMPAL040039-09B-01R using Illumina NextSeq 500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-NextSeq500:01	BCCA	2017-08-24	TARGET-15-SJMPAL040039-09B-01R m18855 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 2.4.11	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	m18855_4_lanes_dupsFlagged.bam	SRR6031110	@dbgap@:reads/SRP011999/SRS1761056/SRX3181466/SRR6031110/SRR6031110.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-15-SJMPAL040039-09B-01R.mirna.quantification.txt	3	20
TARGET-15-SJMPAL040459	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Mixed Phenotype Acute Leukemia	NCIt	Discovery	TARGET-15-SJMPAL040459-09B	organism part	EFO	Bone Marrow	NCIt	"Primary Blood Derived Cancer - Bone Marrow"	stjude.org:Protocol:RNA-Extraction-TRIzol:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL040459-09B-01R	RNA	EFO	SRS1761082	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL040459-09B-01R m18853 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m18853	SRX3181469	"miRNA-Seq analysis of mixed phenotype acute leukemia sample TARGET-15-SJMPAL040459-09B-01R using Illumina NextSeq 500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-NextSeq500:01	BCCA	2017-08-24	TARGET-15-SJMPAL040459-09B-01R m18853 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 2.4.11	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	m18853_4_lanes_dupsFlagged.bam	SRR6031123	@dbgap@:reads/SRP011999/SRS1761082/SRX3181469/SRR6031123/SRR6031123.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-15-SJMPAL040459-09B-01R.isoform.quantification.txt	3	20
TARGET-15-SJMPAL040459	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Mixed Phenotype Acute Leukemia	NCIt	Discovery	TARGET-15-SJMPAL040459-09B	organism part	EFO	Bone Marrow	NCIt	"Primary Blood Derived Cancer - Bone Marrow"	stjude.org:Protocol:RNA-Extraction-TRIzol:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL040459-09B-01R	RNA	EFO	SRS1761082	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL040459-09B-01R m18853 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m18853	SRX3181469	"miRNA-Seq analysis of mixed phenotype acute leukemia sample TARGET-15-SJMPAL040459-09B-01R using Illumina NextSeq 500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-NextSeq500:01	BCCA	2017-08-24	TARGET-15-SJMPAL040459-09B-01R m18853 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 2.4.11	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	m18853_4_lanes_dupsFlagged.bam	SRR6031123	@dbgap@:reads/SRP011999/SRS1761082/SRX3181469/SRR6031123/SRR6031123.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-15-SJMPAL040459-09B-01R.mirna.quantification.txt	3	20
TARGET-15-SJMPAL041119	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Mixed Phenotype Acute Leukemia	NCIt	Discovery	TARGET-15-SJMPAL041119-09B	organism part	EFO	Bone Marrow	NCIt	"Primary Blood Derived Cancer - Bone Marrow"	stjude.org:Protocol:RNA-Extraction-TRIzol:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL041119-09B-01R	RNA	EFO	SRS1761064	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL041119-09B-01R m18425 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m18425	SRX2884726	"miRNA-Seq analysis of mixed phenotype acute leukemia sample TARGET-15-SJMPAL041119-09B-01R using Illumina NextSeq 500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-NextSeq500:01	BCCA	2017-03-29	TARGET-15-SJMPAL041119-09B-01R m18425 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 2.4.11	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	m18425_4_lanes_dupsFlagged.bam	SRR5647118	@dbgap@:reads/SRP011999/SRS1761064/SRX2884726/SRR5647118/SRR5647118.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-15-SJMPAL041119-09B-01R.isoform.quantification.txt	3	20
TARGET-15-SJMPAL041119	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Mixed Phenotype Acute Leukemia	NCIt	Discovery	TARGET-15-SJMPAL041119-09B	organism part	EFO	Bone Marrow	NCIt	"Primary Blood Derived Cancer - Bone Marrow"	stjude.org:Protocol:RNA-Extraction-TRIzol:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL041119-09B-01R	RNA	EFO	SRS1761064	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL041119-09B-01R m18425 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m18425	SRX2884726	"miRNA-Seq analysis of mixed phenotype acute leukemia sample TARGET-15-SJMPAL041119-09B-01R using Illumina NextSeq 500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-NextSeq500:01	BCCA	2017-03-29	TARGET-15-SJMPAL041119-09B-01R m18425 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 2.4.11	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	m18425_4_lanes_dupsFlagged.bam	SRR5647118	@dbgap@:reads/SRP011999/SRS1761064/SRX2884726/SRR5647118/SRR5647118.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-15-SJMPAL041119-09B-01R.mirna.quantification.txt	3	20
TARGET-15-SJMPAL041120	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Mixed Phenotype Acute Leukemia	NCIt	Discovery	TARGET-15-SJMPAL041120-09B	organism part	EFO	Bone Marrow	NCIt	"Primary Blood Derived Cancer - Bone Marrow"	stjude.org:Protocol:RNA-Extraction-TRIzol:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL041120-09B-01R	RNA	EFO	SRS1761060	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL041120-09B-01R m18426 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m18426	SRX2884711	"miRNA-Seq analysis of mixed phenotype acute leukemia sample TARGET-15-SJMPAL041120-09B-01R using Illumina NextSeq 500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-NextSeq500:01	BCCA	2017-03-29	TARGET-15-SJMPAL041120-09B-01R m18426 run	sequencing assay	EFO	24	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 2.4.11	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	m18426_4_lanes_dupsFlagged.bam	SRR5647103	@dbgap@:reads/SRP011999/SRS1761060/SRX2884711/SRR5647103/SRR5647103.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-15-SJMPAL041120-09B-01R.isoform.quantification.txt	3	20
TARGET-15-SJMPAL041120	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Mixed Phenotype Acute Leukemia	NCIt	Discovery	TARGET-15-SJMPAL041120-09B	organism part	EFO	Bone Marrow	NCIt	"Primary Blood Derived Cancer - Bone Marrow"	stjude.org:Protocol:RNA-Extraction-TRIzol:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL041120-09B-01R	RNA	EFO	SRS1761060	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL041120-09B-01R m18426 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m18426	SRX2884711	"miRNA-Seq analysis of mixed phenotype acute leukemia sample TARGET-15-SJMPAL041120-09B-01R using Illumina NextSeq 500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-NextSeq500:01	BCCA	2017-03-29	TARGET-15-SJMPAL041120-09B-01R m18426 run	sequencing assay	EFO	24	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 2.4.11	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	m18426_4_lanes_dupsFlagged.bam	SRR5647103	@dbgap@:reads/SRP011999/SRS1761060/SRX2884711/SRR5647103/SRR5647103.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-15-SJMPAL041120-09B-01R.mirna.quantification.txt	3	20
TARGET-15-SJMPAL042787	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Mixed Phenotype Acute Leukemia	NCIt	Discovery	TARGET-15-SJMPAL042787-09B	organism part	EFO	Bone Marrow	NCIt	"Primary Blood Derived Cancer - Bone Marrow"	stjude.org:Protocol:RNA-Extraction-TRIzol:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL042787-09B-01R	RNA	EFO	SRS1761074	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL042787-09B-01R m18427 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m18427	SRX2884716	"miRNA-Seq analysis of mixed phenotype acute leukemia sample TARGET-15-SJMPAL042787-09B-01R using Illumina NextSeq 500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-NextSeq500:01	BCCA	2017-03-29	TARGET-15-SJMPAL042787-09B-01R m18427 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 2.4.11	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	m18427_4_lanes_dupsFlagged.bam	SRR5647120	@dbgap@:reads/SRP011999/SRS1761074/SRX2884716/SRR5647120/SRR5647120.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-15-SJMPAL042787-09B-01R.isoform.quantification.txt	3	20
TARGET-15-SJMPAL042787	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Mixed Phenotype Acute Leukemia	NCIt	Discovery	TARGET-15-SJMPAL042787-09B	organism part	EFO	Bone Marrow	NCIt	"Primary Blood Derived Cancer - Bone Marrow"	stjude.org:Protocol:RNA-Extraction-TRIzol:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL042787-09B-01R	RNA	EFO	SRS1761074	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL042787-09B-01R m18427 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m18427	SRX2884716	"miRNA-Seq analysis of mixed phenotype acute leukemia sample TARGET-15-SJMPAL042787-09B-01R using Illumina NextSeq 500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-NextSeq500:01	BCCA	2017-03-29	TARGET-15-SJMPAL042787-09B-01R m18427 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 2.4.11	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	m18427_4_lanes_dupsFlagged.bam	SRR5647120	@dbgap@:reads/SRP011999/SRS1761074/SRX2884716/SRR5647120/SRR5647120.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-15-SJMPAL042787-09B-01R.mirna.quantification.txt	3	20
TARGET-15-SJMPAL042791	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Mixed Phenotype Acute Leukemia	NCIt	Discovery	TARGET-15-SJMPAL042791-09B	organism part	EFO	Bone Marrow	NCIt	"Primary Blood Derived Cancer - Bone Marrow"	stjude.org:Protocol:RNA-Extraction-TRIzol:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL042791-09B-01R	RNA	EFO	SRS1761068	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL042791-09B-01R m18854 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m18854	SRX3181451	"miRNA-Seq analysis of mixed phenotype acute leukemia sample TARGET-15-SJMPAL042791-09B-01R using Illumina NextSeq 500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-NextSeq500:01	BCCA	2017-08-24	TARGET-15-SJMPAL042791-09B-01R m18854 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 2.4.11	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	m18854_4_lanes_dupsFlagged.bam	SRR6031128	@dbgap@:reads/SRP011999/SRS1761068/SRX3181451/SRR6031128/SRR6031128.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-15-SJMPAL042791-09B-01R.isoform.quantification.txt	3	20
TARGET-15-SJMPAL042791	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Mixed Phenotype Acute Leukemia	NCIt	Discovery	TARGET-15-SJMPAL042791-09B	organism part	EFO	Bone Marrow	NCIt	"Primary Blood Derived Cancer - Bone Marrow"	stjude.org:Protocol:RNA-Extraction-TRIzol:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL042791-09B-01R	RNA	EFO	SRS1761068	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL042791-09B-01R m18854 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m18854	SRX3181451	"miRNA-Seq analysis of mixed phenotype acute leukemia sample TARGET-15-SJMPAL042791-09B-01R using Illumina NextSeq 500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-NextSeq500:01	BCCA	2017-08-24	TARGET-15-SJMPAL042791-09B-01R m18854 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 2.4.11	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	m18854_4_lanes_dupsFlagged.bam	SRR6031128	@dbgap@:reads/SRP011999/SRS1761068/SRX3181451/SRR6031128/SRR6031128.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-15-SJMPAL042791-09B-01R.mirna.quantification.txt	3	20
TARGET-15-SJMPAL042793	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Mixed Phenotype Acute Leukemia	NCIt	Discovery	TARGET-15-SJMPAL042793-09B	organism part	EFO	Bone Marrow	NCIt	"Primary Blood Derived Cancer - Bone Marrow"	stjude.org:Protocol:RNA-Extraction-TRIzol:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL042793-09B-01R	RNA	EFO	SRS1761062	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL042793-09B-01R m18436 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m18436	SRX2884709	"miRNA-Seq analysis of mixed phenotype acute leukemia sample TARGET-15-SJMPAL042793-09B-01R using Illumina NextSeq 500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-NextSeq500:01	BCCA	2017-03-29	TARGET-15-SJMPAL042793-09B-01R m18436 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 2.4.11	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	m18436_4_lanes_dupsFlagged.bam	SRR5647099	@dbgap@:reads/SRP011999/SRS1761062/SRX2884709/SRR5647099/SRR5647099.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-15-SJMPAL042793-09B-01R.isoform.quantification.txt	3	20
TARGET-15-SJMPAL042793	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Mixed Phenotype Acute Leukemia	NCIt	Discovery	TARGET-15-SJMPAL042793-09B	organism part	EFO	Bone Marrow	NCIt	"Primary Blood Derived Cancer - Bone Marrow"	stjude.org:Protocol:RNA-Extraction-TRIzol:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL042793-09B-01R	RNA	EFO	SRS1761062	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL042793-09B-01R m18436 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m18436	SRX2884709	"miRNA-Seq analysis of mixed phenotype acute leukemia sample TARGET-15-SJMPAL042793-09B-01R using Illumina NextSeq 500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-NextSeq500:01	BCCA	2017-03-29	TARGET-15-SJMPAL042793-09B-01R m18436 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 2.4.11	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	m18436_4_lanes_dupsFlagged.bam	SRR5647099	@dbgap@:reads/SRP011999/SRS1761062/SRX2884709/SRR5647099/SRR5647099.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-15-SJMPAL042793-09B-01R.mirna.quantification.txt	3	20
TARGET-15-SJMPAL042794	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Mixed Phenotype Acute Leukemia	NCIt	Discovery	TARGET-15-SJMPAL042794-09B	organism part	EFO	Bone Marrow	NCIt	"Primary Blood Derived Cancer - Bone Marrow"	stjude.org:Protocol:RNA-Extraction-TRIzol:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL042794-09B-01R	RNA	EFO	SRS1761063	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL042794-09B-01R m18437 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m18437	SRX2884722	"miRNA-Seq analysis of mixed phenotype acute leukemia sample TARGET-15-SJMPAL042794-09B-01R using Illumina NextSeq 500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-NextSeq500:01	BCCA	2017-03-29	TARGET-15-SJMPAL042794-09B-01R m18437 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 2.4.11	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	m18437_4_lanes_dupsFlagged.bam	SRR5647105	@dbgap@:reads/SRP011999/SRS1761063/SRX2884722/SRR5647105/SRR5647105.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-15-SJMPAL042794-09B-01R.isoform.quantification.txt	3	20
TARGET-15-SJMPAL042794	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Mixed Phenotype Acute Leukemia	NCIt	Discovery	TARGET-15-SJMPAL042794-09B	organism part	EFO	Bone Marrow	NCIt	"Primary Blood Derived Cancer - Bone Marrow"	stjude.org:Protocol:RNA-Extraction-TRIzol:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL042794-09B-01R	RNA	EFO	SRS1761063	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL042794-09B-01R m18437 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m18437	SRX2884722	"miRNA-Seq analysis of mixed phenotype acute leukemia sample TARGET-15-SJMPAL042794-09B-01R using Illumina NextSeq 500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-NextSeq500:01	BCCA	2017-03-29	TARGET-15-SJMPAL042794-09B-01R m18437 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 2.4.11	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	m18437_4_lanes_dupsFlagged.bam	SRR5647105	@dbgap@:reads/SRP011999/SRS1761063/SRX2884722/SRR5647105/SRR5647105.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-15-SJMPAL042794-09B-01R.mirna.quantification.txt	3	20
TARGET-15-SJMPAL042801	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Mixed Phenotype Acute Leukemia	NCIt	Discovery	TARGET-15-SJMPAL042801-09B	organism part	EFO	Bone Marrow	NCIt	"Primary Blood Derived Cancer - Bone Marrow"	stjude.org:Protocol:RNA-Extraction-TRIzol:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL042801-09B-01R	RNA	EFO	SRS1761069	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL042801-09B-01R m18438 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m18438	SRX2884724	"miRNA-Seq analysis of mixed phenotype acute leukemia sample TARGET-15-SJMPAL042801-09B-01R using Illumina NextSeq 500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-NextSeq500:01	BCCA	2017-03-29	TARGET-15-SJMPAL042801-09B-01R m18438 run	sequencing assay	EFO	24	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 2.4.11	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	m18438_4_lanes_dupsFlagged.bam	SRR5647114	@dbgap@:reads/SRP011999/SRS1761069/SRX2884724/SRR5647114/SRR5647114.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-15-SJMPAL042801-09B-01R.isoform.quantification.txt	3	20
TARGET-15-SJMPAL042801	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Mixed Phenotype Acute Leukemia	NCIt	Discovery	TARGET-15-SJMPAL042801-09B	organism part	EFO	Bone Marrow	NCIt	"Primary Blood Derived Cancer - Bone Marrow"	stjude.org:Protocol:RNA-Extraction-TRIzol:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL042801-09B-01R	RNA	EFO	SRS1761069	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL042801-09B-01R m18438 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m18438	SRX2884724	"miRNA-Seq analysis of mixed phenotype acute leukemia sample TARGET-15-SJMPAL042801-09B-01R using Illumina NextSeq 500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-NextSeq500:01	BCCA	2017-03-29	TARGET-15-SJMPAL042801-09B-01R m18438 run	sequencing assay	EFO	24	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 2.4.11	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	m18438_4_lanes_dupsFlagged.bam	SRR5647114	@dbgap@:reads/SRP011999/SRS1761069/SRX2884724/SRR5647114/SRR5647114.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-15-SJMPAL042801-09B-01R.mirna.quantification.txt	3	20
TARGET-15-SJMPAL042946	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Mixed Phenotype Acute Leukemia	NCIt	Discovery	TARGET-15-SJMPAL042946-04B	organism part	EFO	Bone Marrow	NCIt	"Recurrent Blood Derived Cancer - Bone Marrow"	stjude.org:Protocol:RNA-Extraction-TRIzol:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL042946-04B-01R	RNA	EFO	SRS1761086	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL042946-04B-01R m18401 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m18401	SRX2884710	"miRNA-Seq analysis of mixed phenotype acute leukemia sample TARGET-15-SJMPAL042946-04B-01R using Illumina NextSeq 500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-NextSeq500:01	BCCA	2017-03-29	TARGET-15-SJMPAL042946-04B-01R m18401 run	sequencing assay	EFO	24	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 2.4.11	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	m18401_4_lanes_dupsFlagged.bam	SRR5647104	@dbgap@:reads/SRP011999/SRS1761086/SRX2884710/SRR5647104/SRR5647104.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-15-SJMPAL042946-04B-01R.isoform.quantification.txt	3	20
TARGET-15-SJMPAL042946	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Mixed Phenotype Acute Leukemia	NCIt	Discovery	TARGET-15-SJMPAL042946-04B	organism part	EFO	Bone Marrow	NCIt	"Recurrent Blood Derived Cancer - Bone Marrow"	stjude.org:Protocol:RNA-Extraction-TRIzol:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL042946-04B-01R	RNA	EFO	SRS1761086	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL042946-04B-01R m18401 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m18401	SRX2884710	"miRNA-Seq analysis of mixed phenotype acute leukemia sample TARGET-15-SJMPAL042946-04B-01R using Illumina NextSeq 500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-NextSeq500:01	BCCA	2017-03-29	TARGET-15-SJMPAL042946-04B-01R m18401 run	sequencing assay	EFO	24	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 2.4.11	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	m18401_4_lanes_dupsFlagged.bam	SRR5647104	@dbgap@:reads/SRP011999/SRS1761086/SRX2884710/SRR5647104/SRR5647104.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-15-SJMPAL042946-04B-01R.mirna.quantification.txt	3	20
TARGET-15-SJMPAL042946	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Mixed Phenotype Acute Leukemia	NCIt	Discovery	TARGET-15-SJMPAL042946-09B	organism part	EFO	Bone Marrow	NCIt	"Primary Blood Derived Cancer - Bone Marrow"	stjude.org:Protocol:RNA-Extraction-TRIzol:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL042946-09B-01R	RNA	EFO	SRS1761094	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL042946-09B-01R m18400 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m18400	SRX2884725	"miRNA-Seq analysis of mixed phenotype acute leukemia sample TARGET-15-SJMPAL042946-09B-01R using Illumina NextSeq 500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-NextSeq500:01	BCCA	2017-03-29	TARGET-15-SJMPAL042946-09B-01R m18400 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 2.4.11	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	m18400_4_lanes_dupsFlagged.bam	SRR5647117	@dbgap@:reads/SRP011999/SRS1761094/SRX2884725/SRR5647117/SRR5647117.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-15-SJMPAL042946-09B-01R.isoform.quantification.txt	3	20
TARGET-15-SJMPAL042946	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Mixed Phenotype Acute Leukemia	NCIt	Discovery	TARGET-15-SJMPAL042946-09B	organism part	EFO	Bone Marrow	NCIt	"Primary Blood Derived Cancer - Bone Marrow"	stjude.org:Protocol:RNA-Extraction-TRIzol:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL042946-09B-01R	RNA	EFO	SRS1761094	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL042946-09B-01R m18400 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m18400	SRX2884725	"miRNA-Seq analysis of mixed phenotype acute leukemia sample TARGET-15-SJMPAL042946-09B-01R using Illumina NextSeq 500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-NextSeq500:01	BCCA	2017-03-29	TARGET-15-SJMPAL042946-09B-01R m18400 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 2.4.11	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	m18400_4_lanes_dupsFlagged.bam	SRR5647117	@dbgap@:reads/SRP011999/SRS1761094/SRX2884725/SRR5647117/SRR5647117.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-15-SJMPAL042946-09B-01R.mirna.quantification.txt	3	20
TARGET-15-SJMPAL043506	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Mixed Phenotype Acute Leukemia	NCIt	Discovery	TARGET-15-SJMPAL043506-04B	organism part	EFO	Bone Marrow	NCIt	"Recurrent Blood Derived Cancer - Bone Marrow"	stjude.org:Protocol:RNA-Extraction-TRIzol:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL043506-04B-01R	RNA	EFO	SRS1761089	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL043506-04B-01R m18839 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m18839	SRX3181455	"miRNA-Seq analysis of mixed phenotype acute leukemia sample TARGET-15-SJMPAL043506-04B-01R using Illumina NextSeq 500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-NextSeq500:01	BCCA	2017-08-24	TARGET-15-SJMPAL043506-04B-01R m18839 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 2.4.11	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	m18839_4_lanes_dupsFlagged.bam	SRR6031127	@dbgap@:reads/SRP011999/SRS1761089/SRX3181455/SRR6031127/SRR6031127.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-15-SJMPAL043506-04B-01R.isoform.quantification.txt	3	20
TARGET-15-SJMPAL043506	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Mixed Phenotype Acute Leukemia	NCIt	Discovery	TARGET-15-SJMPAL043506-04B	organism part	EFO	Bone Marrow	NCIt	"Recurrent Blood Derived Cancer - Bone Marrow"	stjude.org:Protocol:RNA-Extraction-TRIzol:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL043506-04B-01R	RNA	EFO	SRS1761089	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL043506-04B-01R m18839 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m18839	SRX3181455	"miRNA-Seq analysis of mixed phenotype acute leukemia sample TARGET-15-SJMPAL043506-04B-01R using Illumina NextSeq 500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-NextSeq500:01	BCCA	2017-08-24	TARGET-15-SJMPAL043506-04B-01R m18839 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 2.4.11	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	m18839_4_lanes_dupsFlagged.bam	SRR6031127	@dbgap@:reads/SRP011999/SRS1761089/SRX3181455/SRR6031127/SRR6031127.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-15-SJMPAL043506-04B-01R.mirna.quantification.txt	3	20
TARGET-15-SJMPAL043507	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Mixed Phenotype Acute Leukemia	NCIt	Discovery	TARGET-15-SJMPAL043507-04B	organism part	EFO	Bone Marrow	NCIt	"Recurrent Blood Derived Cancer - Bone Marrow"	stjude.org:Protocol:RNA-Extraction-TRIzol:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL043507-04B-01R	RNA	EFO	SRS1761093	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL043507-04B-01R m18841 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m18841	SRX3181463	"miRNA-Seq analysis of mixed phenotype acute leukemia sample TARGET-15-SJMPAL043507-04B-01R using Illumina NextSeq 500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-NextSeq500:01	BCCA	2017-08-24	TARGET-15-SJMPAL043507-04B-01R m18841 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 2.4.11	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	m18841_4_lanes_dupsFlagged.bam	SRR6031125	@dbgap@:reads/SRP011999/SRS1761093/SRX3181463/SRR6031125/SRR6031125.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-15-SJMPAL043507-04B-01R.isoform.quantification.txt	3	20
TARGET-15-SJMPAL043507	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Mixed Phenotype Acute Leukemia	NCIt	Discovery	TARGET-15-SJMPAL043507-04B	organism part	EFO	Bone Marrow	NCIt	"Recurrent Blood Derived Cancer - Bone Marrow"	stjude.org:Protocol:RNA-Extraction-TRIzol:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL043507-04B-01R	RNA	EFO	SRS1761093	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL043507-04B-01R m18841 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m18841	SRX3181463	"miRNA-Seq analysis of mixed phenotype acute leukemia sample TARGET-15-SJMPAL043507-04B-01R using Illumina NextSeq 500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-NextSeq500:01	BCCA	2017-08-24	TARGET-15-SJMPAL043507-04B-01R m18841 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 2.4.11	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	m18841_4_lanes_dupsFlagged.bam	SRR6031125	@dbgap@:reads/SRP011999/SRS1761093/SRX3181463/SRR6031125/SRR6031125.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-15-SJMPAL043507-04B-01R.mirna.quantification.txt	3	20
TARGET-15-SJMPAL043508	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Mixed Phenotype Acute Leukemia	NCIt	Discovery	TARGET-15-SJMPAL043508-09B	organism part	EFO	Bone Marrow	NCIt	"Primary Blood Derived Cancer - Bone Marrow"	stjude.org:Protocol:RNA-Extraction-TRIzol:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL043508-09B-01R	RNA	EFO	SRS1761085	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL043508-09B-01R m18842 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m18842	SRX3181468	"miRNA-Seq analysis of mixed phenotype acute leukemia sample TARGET-15-SJMPAL043508-09B-01R using Illumina NextSeq 500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-NextSeq500:01	BCCA	2017-08-24	TARGET-15-SJMPAL043508-09B-01R m18842 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 2.4.11	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	m18842_4_lanes_dupsFlagged.bam	SRR6031112	@dbgap@:reads/SRP011999/SRS1761085/SRX3181468/SRR6031112/SRR6031112.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-15-SJMPAL043508-09B-01R.isoform.quantification.txt	3	20
TARGET-15-SJMPAL043508	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Mixed Phenotype Acute Leukemia	NCIt	Discovery	TARGET-15-SJMPAL043508-09B	organism part	EFO	Bone Marrow	NCIt	"Primary Blood Derived Cancer - Bone Marrow"	stjude.org:Protocol:RNA-Extraction-TRIzol:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL043508-09B-01R	RNA	EFO	SRS1761085	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL043508-09B-01R m18842 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m18842	SRX3181468	"miRNA-Seq analysis of mixed phenotype acute leukemia sample TARGET-15-SJMPAL043508-09B-01R using Illumina NextSeq 500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-NextSeq500:01	BCCA	2017-08-24	TARGET-15-SJMPAL043508-09B-01R m18842 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 2.4.11	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	m18842_4_lanes_dupsFlagged.bam	SRR6031112	@dbgap@:reads/SRP011999/SRS1761085/SRX3181468/SRR6031112/SRR6031112.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-15-SJMPAL043508-09B-01R.mirna.quantification.txt	3	20
TARGET-15-SJMPAL043511	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Mixed Phenotype Acute Leukemia	NCIt	Discovery	TARGET-15-SJMPAL043511-09B	organism part	EFO	Bone Marrow	NCIt	"Primary Blood Derived Cancer - Bone Marrow"	stjude.org:Protocol:RNA-Extraction-TRIzol:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL043511-09B-01R	RNA	EFO	SRS1761099	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL043511-09B-01R m18845 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m18845	SRX3181461	"miRNA-Seq analysis of mixed phenotype acute leukemia sample TARGET-15-SJMPAL043511-09B-01R using Illumina NextSeq 500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-NextSeq500:01	BCCA	2017-08-24	TARGET-15-SJMPAL043511-09B-01R m18845 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 2.4.11	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	m18845_4_lanes_dupsFlagged.bam	SRR6031116	@dbgap@:reads/SRP011999/SRS1761099/SRX3181461/SRR6031116/SRR6031116.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-15-SJMPAL043511-09B-01R.isoform.quantification.txt	3	20
TARGET-15-SJMPAL043511	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Mixed Phenotype Acute Leukemia	NCIt	Discovery	TARGET-15-SJMPAL043511-09B	organism part	EFO	Bone Marrow	NCIt	"Primary Blood Derived Cancer - Bone Marrow"	stjude.org:Protocol:RNA-Extraction-TRIzol:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL043511-09B-01R	RNA	EFO	SRS1761099	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL043511-09B-01R m18845 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m18845	SRX3181461	"miRNA-Seq analysis of mixed phenotype acute leukemia sample TARGET-15-SJMPAL043511-09B-01R using Illumina NextSeq 500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-NextSeq500:01	BCCA	2017-08-24	TARGET-15-SJMPAL043511-09B-01R m18845 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 2.4.11	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	m18845_4_lanes_dupsFlagged.bam	SRR6031116	@dbgap@:reads/SRP011999/SRS1761099/SRX3181461/SRR6031116/SRR6031116.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-15-SJMPAL043511-09B-01R.mirna.quantification.txt	3	20
TARGET-15-SJMPAL043512	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Mixed Phenotype Acute Leukemia	NCIt	Discovery	TARGET-15-SJMPAL043512-09B	organism part	EFO	Bone Marrow	NCIt	"Primary Blood Derived Cancer - Bone Marrow"	stjude.org:Protocol:RNA-Extraction-TRIzol:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL043512-09B-01R	RNA	EFO	SRS1761100	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL043512-09B-01R m18410 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m18410	SRX2884728	"miRNA-Seq analysis of mixed phenotype acute leukemia sample TARGET-15-SJMPAL043512-09B-01R using Illumina NextSeq 500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-NextSeq500:01	BCCA	2017-03-29	TARGET-15-SJMPAL043512-09B-01R m18410 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 2.4.11	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	m18410_4_lanes_dupsFlagged.bam	SRR5647121	@dbgap@:reads/SRP011999/SRS1761100/SRX2884728/SRR5647121/SRR5647121.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-15-SJMPAL043512-09B-01R.isoform.quantification.txt	3	20
TARGET-15-SJMPAL043512	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Mixed Phenotype Acute Leukemia	NCIt	Discovery	TARGET-15-SJMPAL043512-09B	organism part	EFO	Bone Marrow	NCIt	"Primary Blood Derived Cancer - Bone Marrow"	stjude.org:Protocol:RNA-Extraction-TRIzol:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL043512-09B-01R	RNA	EFO	SRS1761100	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL043512-09B-01R m18410 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m18410	SRX2884728	"miRNA-Seq analysis of mixed phenotype acute leukemia sample TARGET-15-SJMPAL043512-09B-01R using Illumina NextSeq 500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-NextSeq500:01	BCCA	2017-03-29	TARGET-15-SJMPAL043512-09B-01R m18410 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 2.4.11	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	m18410_4_lanes_dupsFlagged.bam	SRR5647121	@dbgap@:reads/SRP011999/SRS1761100/SRX2884728/SRR5647121/SRR5647121.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-15-SJMPAL043512-09B-01R.mirna.quantification.txt	3	20
TARGET-15-SJMPAL043513	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Mixed Phenotype Acute Leukemia	NCIt	Discovery	TARGET-15-SJMPAL043513-04B	organism part	EFO	Bone Marrow	NCIt	"Recurrent Blood Derived Cancer - Bone Marrow"	stjude.org:Protocol:RNA-Extraction-TRIzol:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL043513-04B-01R	RNA	EFO	SRS1761092	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL043513-04B-01R m18411 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m18411	SRX2884708	"miRNA-Seq analysis of mixed phenotype acute leukemia sample TARGET-15-SJMPAL043513-04B-01R using Illumina NextSeq 500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-NextSeq500:01	BCCA	2017-03-29	TARGET-15-SJMPAL043513-04B-01R m18411 run	sequencing assay	EFO	24	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 2.4.11	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	m18411_4_lanes_dupsFlagged.bam	SRR5647111	@dbgap@:reads/SRP011999/SRS1761092/SRX2884708/SRR5647111/SRR5647111.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-15-SJMPAL043513-04B-01R.isoform.quantification.txt	3	20
TARGET-15-SJMPAL043513	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Recurrent Childhood Mixed Phenotype Acute Leukemia	NCIt	Discovery	TARGET-15-SJMPAL043513-04B	organism part	EFO	Bone Marrow	NCIt	"Recurrent Blood Derived Cancer - Bone Marrow"	stjude.org:Protocol:RNA-Extraction-TRIzol:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL043513-04B-01R	RNA	EFO	SRS1761092	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL043513-04B-01R m18411 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m18411	SRX2884708	"miRNA-Seq analysis of mixed phenotype acute leukemia sample TARGET-15-SJMPAL043513-04B-01R using Illumina NextSeq 500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-NextSeq500:01	BCCA	2017-03-29	TARGET-15-SJMPAL043513-04B-01R m18411 run	sequencing assay	EFO	24	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 2.4.11	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	m18411_4_lanes_dupsFlagged.bam	SRR5647111	@dbgap@:reads/SRP011999/SRS1761092/SRX2884708/SRR5647111/SRR5647111.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-15-SJMPAL043513-04B-01R.mirna.quantification.txt	3	20
TARGET-15-SJMPAL043767	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Mixed Phenotype Acute Leukemia	NCIt	Discovery	TARGET-15-SJMPAL043767-09B	organism part	EFO	Bone Marrow	NCIt	"Primary Blood Derived Cancer - Bone Marrow"	stjude.org:Protocol:RNA-Extraction-TRIzol:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL043767-09B-01R	RNA	EFO	SRS1761095	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL043767-09B-01R m18405 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m18405	SRX2884717	"miRNA-Seq analysis of mixed phenotype acute leukemia sample TARGET-15-SJMPAL043767-09B-01R using Illumina NextSeq 500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-NextSeq500:01	BCCA	2017-03-29	TARGET-15-SJMPAL043767-09B-01R m18405 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 2.4.11	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	m18405_4_lanes_dupsFlagged.bam	SRR5647109	@dbgap@:reads/SRP011999/SRS1761095/SRX2884717/SRR5647109/SRR5647109.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-15-SJMPAL043767-09B-01R.isoform.quantification.txt	3	20
TARGET-15-SJMPAL043767	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Mixed Phenotype Acute Leukemia	NCIt	Discovery	TARGET-15-SJMPAL043767-09B	organism part	EFO	Bone Marrow	NCIt	"Primary Blood Derived Cancer - Bone Marrow"	stjude.org:Protocol:RNA-Extraction-TRIzol:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL043767-09B-01R	RNA	EFO	SRS1761095	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL043767-09B-01R m18405 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m18405	SRX2884717	"miRNA-Seq analysis of mixed phenotype acute leukemia sample TARGET-15-SJMPAL043767-09B-01R using Illumina NextSeq 500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-NextSeq500:01	BCCA	2017-03-29	TARGET-15-SJMPAL043767-09B-01R m18405 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 2.4.11	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	m18405_4_lanes_dupsFlagged.bam	SRR5647109	@dbgap@:reads/SRP011999/SRS1761095/SRX2884717/SRR5647109/SRR5647109.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-15-SJMPAL043767-09B-01R.mirna.quantification.txt	3	20
TARGET-15-SJMPAL043768	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Mixed Phenotype Acute Leukemia	NCIt	Discovery	TARGET-15-SJMPAL043768-09B	organism part	EFO	Bone Marrow	NCIt	"Primary Blood Derived Cancer - Bone Marrow"	stjude.org:Protocol:RNA-Extraction-TRIzol:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL043768-09B-01R	RNA	EFO	SRS1761087	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL043768-09B-01R m18406 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m18406	SRX2884729	"miRNA-Seq analysis of mixed phenotype acute leukemia sample TARGET-15-SJMPAL043768-09B-01R using Illumina NextSeq 500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-NextSeq500:01	BCCA	2017-03-29	TARGET-15-SJMPAL043768-09B-01R m18406 run	sequencing assay	EFO	24	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 2.4.11	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	m18406_4_lanes_dupsFlagged.bam	SRR5647101	@dbgap@:reads/SRP011999/SRS1761087/SRX2884729/SRR5647101/SRR5647101.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-15-SJMPAL043768-09B-01R.isoform.quantification.txt	3	20
TARGET-15-SJMPAL043768	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Mixed Phenotype Acute Leukemia	NCIt	Discovery	TARGET-15-SJMPAL043768-09B	organism part	EFO	Bone Marrow	NCIt	"Primary Blood Derived Cancer - Bone Marrow"	stjude.org:Protocol:RNA-Extraction-TRIzol:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL043768-09B-01R	RNA	EFO	SRS1761087	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL043768-09B-01R m18406 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m18406	SRX2884729	"miRNA-Seq analysis of mixed phenotype acute leukemia sample TARGET-15-SJMPAL043768-09B-01R using Illumina NextSeq 500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-NextSeq500:01	BCCA	2017-03-29	TARGET-15-SJMPAL043768-09B-01R m18406 run	sequencing assay	EFO	24	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 2.4.11	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	m18406_4_lanes_dupsFlagged.bam	SRR5647101	@dbgap@:reads/SRP011999/SRS1761087/SRX2884729/SRR5647101/SRR5647101.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-15-SJMPAL043768-09B-01R.mirna.quantification.txt	3	20
TARGET-15-SJMPAL043769	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Mixed Phenotype Acute Leukemia	NCIt	Discovery	TARGET-15-SJMPAL043769-03B	organism part	EFO	Peripheral Blood	NCIt	"Primary Blood Derived Cancer - Peripheral Blood"	stjude.org:Protocol:RNA-Extraction-TRIzol:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL043769-03B-01R	RNA	EFO	SRS1761088	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL043769-03B-01R m18844 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m18844	SRX3181471	"miRNA-Seq analysis of mixed phenotype acute leukemia sample TARGET-15-SJMPAL043769-03B-01R using Illumina NextSeq 500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-NextSeq500:01	BCCA	2017-08-24	TARGET-15-SJMPAL043769-03B-01R m18844 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 2.4.11	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	m18844_4_lanes_dupsFlagged.bam	SRR6031126	@dbgap@:reads/SRP011999/SRS1761088/SRX3181471/SRR6031126/SRR6031126.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-15-SJMPAL043769-03B-01R.isoform.quantification.txt	3	20
TARGET-15-SJMPAL043769	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Mixed Phenotype Acute Leukemia	NCIt	Discovery	TARGET-15-SJMPAL043769-03B	organism part	EFO	Peripheral Blood	NCIt	"Primary Blood Derived Cancer - Peripheral Blood"	stjude.org:Protocol:RNA-Extraction-TRIzol:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL043769-03B-01R	RNA	EFO	SRS1761088	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL043769-03B-01R m18844 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m18844	SRX3181471	"miRNA-Seq analysis of mixed phenotype acute leukemia sample TARGET-15-SJMPAL043769-03B-01R using Illumina NextSeq 500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-NextSeq500:01	BCCA	2017-08-24	TARGET-15-SJMPAL043769-03B-01R m18844 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 2.4.11	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	m18844_4_lanes_dupsFlagged.bam	SRR6031126	@dbgap@:reads/SRP011999/SRS1761088/SRX3181471/SRR6031126/SRR6031126.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-15-SJMPAL043769-03B-01R.mirna.quantification.txt	3	20
TARGET-15-SJMPAL043770	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Mixed Phenotype Acute Leukemia	NCIt	Discovery	TARGET-15-SJMPAL043770-09B	organism part	EFO	Bone Marrow	NCIt	"Primary Blood Derived Cancer - Bone Marrow"	stjude.org:Protocol:RNA-Extraction-TRIzol:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL043770-09B-01R	RNA	EFO	SRS1761101	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL043770-09B-01R m18408 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m18408	SRX2884713	"miRNA-Seq analysis of mixed phenotype acute leukemia sample TARGET-15-SJMPAL043770-09B-01R using Illumina NextSeq 500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-NextSeq500:01	BCCA	2017-03-29	TARGET-15-SJMPAL043770-09B-01R m18408 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 2.4.11	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	m18408_4_lanes_dupsFlagged.bam	SRR5647113	@dbgap@:reads/SRP011999/SRS1761101/SRX2884713/SRR5647113/SRR5647113.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-15-SJMPAL043770-09B-01R.isoform.quantification.txt	3	20
TARGET-15-SJMPAL043770	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Mixed Phenotype Acute Leukemia	NCIt	Discovery	TARGET-15-SJMPAL043770-09B	organism part	EFO	Bone Marrow	NCIt	"Primary Blood Derived Cancer - Bone Marrow"	stjude.org:Protocol:RNA-Extraction-TRIzol:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL043770-09B-01R	RNA	EFO	SRS1761101	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL043770-09B-01R m18408 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m18408	SRX2884713	"miRNA-Seq analysis of mixed phenotype acute leukemia sample TARGET-15-SJMPAL043770-09B-01R using Illumina NextSeq 500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-NextSeq500:01	BCCA	2017-03-29	TARGET-15-SJMPAL043770-09B-01R m18408 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 2.4.11	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	m18408_4_lanes_dupsFlagged.bam	SRR5647113	@dbgap@:reads/SRP011999/SRS1761101/SRX2884713/SRR5647113/SRR5647113.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-15-SJMPAL043770-09B-01R.mirna.quantification.txt	3	20
TARGET-15-SJMPAL043771	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Mixed Phenotype Acute Leukemia	NCIt	Discovery	TARGET-15-SJMPAL043771-09B	organism part	EFO	Bone Marrow	NCIt	"Primary Blood Derived Cancer - Bone Marrow"	stjude.org:Protocol:RNA-Extraction-TRIzol:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL043771-09B-01R	RNA	EFO	SRS1761090	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL043771-09B-01R m18412 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m18412	SRX2884720	"miRNA-Seq analysis of mixed phenotype acute leukemia sample TARGET-15-SJMPAL043771-09B-01R using Illumina NextSeq 500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-NextSeq500:01	BCCA	2017-03-29	TARGET-15-SJMPAL043771-09B-01R m18412 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 2.4.11	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	m18412_4_lanes_dupsFlagged.bam	SRR5647108	@dbgap@:reads/SRP011999/SRS1761090/SRX2884720/SRR5647108/SRR5647108.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-15-SJMPAL043771-09B-01R.isoform.quantification.txt	3	20
TARGET-15-SJMPAL043771	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Mixed Phenotype Acute Leukemia	NCIt	Discovery	TARGET-15-SJMPAL043771-09B	organism part	EFO	Bone Marrow	NCIt	"Primary Blood Derived Cancer - Bone Marrow"	stjude.org:Protocol:RNA-Extraction-TRIzol:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL043771-09B-01R	RNA	EFO	SRS1761090	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL043771-09B-01R m18412 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m18412	SRX2884720	"miRNA-Seq analysis of mixed phenotype acute leukemia sample TARGET-15-SJMPAL043771-09B-01R using Illumina NextSeq 500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-NextSeq500:01	BCCA	2017-03-29	TARGET-15-SJMPAL043771-09B-01R m18412 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 2.4.11	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	m18412_4_lanes_dupsFlagged.bam	SRR5647108	@dbgap@:reads/SRP011999/SRS1761090/SRX2884720/SRR5647108/SRR5647108.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-15-SJMPAL043771-09B-01R.mirna.quantification.txt	3	20
TARGET-15-SJMPAL043772	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Mixed Phenotype Acute Leukemia	NCIt	Discovery	TARGET-15-SJMPAL043772-04B	organism part	EFO	Bone Marrow	NCIt	"Recurrent Blood Derived Cancer - Bone Marrow"	stjude.org:Protocol:RNA-Extraction-TRIzol:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL043772-04B-01R	RNA	EFO	SRS1761083	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL043772-04B-01R m18413 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m18413	SRX2884723	"miRNA-Seq analysis of mixed phenotype acute leukemia sample TARGET-15-SJMPAL043772-04B-01R using Illumina NextSeq 500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-NextSeq500:01	BCCA	2017-03-29	TARGET-15-SJMPAL043772-04B-01R m18413 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 2.4.11	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	m18413_4_lanes_dupsFlagged.bam	SRR5647106	@dbgap@:reads/SRP011999/SRS1761083/SRX2884723/SRR5647106/SRR5647106.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-15-SJMPAL043772-04B-01R.isoform.quantification.txt	3	20
TARGET-15-SJMPAL043772	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Recurrent Childhood Mixed Phenotype Acute Leukemia	NCIt	Discovery	TARGET-15-SJMPAL043772-04B	organism part	EFO	Bone Marrow	NCIt	"Recurrent Blood Derived Cancer - Bone Marrow"	stjude.org:Protocol:RNA-Extraction-TRIzol:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL043772-04B-01R	RNA	EFO	SRS1761083	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL043772-04B-01R m18413 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m18413	SRX2884723	"miRNA-Seq analysis of mixed phenotype acute leukemia sample TARGET-15-SJMPAL043772-04B-01R using Illumina NextSeq 500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-NextSeq500:01	BCCA	2017-03-29	TARGET-15-SJMPAL043772-04B-01R m18413 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 2.4.11	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	m18413_4_lanes_dupsFlagged.bam	SRR5647106	@dbgap@:reads/SRP011999/SRS1761083/SRX2884723/SRR5647106/SRR5647106.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-15-SJMPAL043772-04B-01R.mirna.quantification.txt	3	20
TARGET-15-SJMPAL043773	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Mixed Phenotype Acute Leukemia	NCIt	Discovery	TARGET-15-SJMPAL043773-03B	organism part	EFO	Peripheral Blood	NCIt	"Primary Blood Derived Cancer - Peripheral Blood"	stjude.org:Protocol:RNA-Extraction-TRIzol:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL043773-03B-01R	RNA	EFO	SRS1761098	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL043773-03B-01R m18414 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m18414	SRX2884714	"miRNA-Seq analysis of mixed phenotype acute leukemia sample TARGET-15-SJMPAL043773-03B-01R using Illumina NextSeq 500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-NextSeq500:01	BCCA	2017-03-29	TARGET-15-SJMPAL043773-03B-01R m18414 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 2.4.11	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	m18414_4_lanes_dupsFlagged.bam	SRR5647116	@dbgap@:reads/SRP011999/SRS1761098/SRX2884714/SRR5647116/SRR5647116.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-15-SJMPAL043773-03B-01R.isoform.quantification.txt	3	20
TARGET-15-SJMPAL043773	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Childhood Mixed Phenotype Acute Leukemia	NCIt	Discovery	TARGET-15-SJMPAL043773-03B	organism part	EFO	Peripheral Blood	NCIt	"Primary Blood Derived Cancer - Peripheral Blood"	stjude.org:Protocol:RNA-Extraction-TRIzol:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL043773-03B-01R	RNA	EFO	SRS1761098	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL043773-03B-01R m18414 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m18414	SRX2884714	"miRNA-Seq analysis of mixed phenotype acute leukemia sample TARGET-15-SJMPAL043773-03B-01R using Illumina NextSeq 500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-NextSeq500:01	BCCA	2017-03-29	TARGET-15-SJMPAL043773-03B-01R m18414 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 2.4.11	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	m18414_4_lanes_dupsFlagged.bam	SRR5647116	@dbgap@:reads/SRP011999/SRS1761098/SRX2884714/SRR5647116/SRR5647116.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-15-SJMPAL043773-03B-01R.mirna.quantification.txt	3	20
TARGET-15-SJMPAL043775	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Mixed Phenotype Acute Leukemia	NCIt	Discovery	TARGET-15-SJMPAL043775-09B	organism part	EFO	Bone Marrow	NCIt	"Primary Blood Derived Cancer - Bone Marrow"	stjude.org:Protocol:RNA-Extraction-TRIzol:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL043775-09B-01R	RNA	EFO	SRS1761067	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL043775-09B-01R m18416 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m18416	SRX2884707	"miRNA-Seq analysis of mixed phenotype acute leukemia sample TARGET-15-SJMPAL043775-09B-01R using Illumina NextSeq 500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-NextSeq500:01	BCCA	2017-03-29	TARGET-15-SJMPAL043775-09B-01R m18416 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 2.4.11	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	m18416_4_lanes_dupsFlagged.bam	SRR5647100	@dbgap@:reads/SRP011999/SRS1761067/SRX2884707/SRR5647100/SRR5647100.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-15-SJMPAL043775-09B-01R.isoform.quantification.txt	3	20
TARGET-15-SJMPAL043775	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Childhood Mixed Phenotype Acute Leukemia	NCIt	Discovery	TARGET-15-SJMPAL043775-09B	organism part	EFO	Bone Marrow	NCIt	"Primary Blood Derived Cancer - Bone Marrow"	stjude.org:Protocol:RNA-Extraction-TRIzol:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL043775-09B-01R	RNA	EFO	SRS1761067	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-15-SJMPAL043775-09B-01R m18416 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m18416	SRX2884707	"miRNA-Seq analysis of mixed phenotype acute leukemia sample TARGET-15-SJMPAL043775-09B-01R using Illumina NextSeq 500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-NextSeq500:01	BCCA	2017-03-29	TARGET-15-SJMPAL043775-09B-01R m18416 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 2.4.11	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	m18416_4_lanes_dupsFlagged.bam	SRR5647100	@dbgap@:reads/SRP011999/SRS1761067/SRX2884707/SRR5647100/SRR5647100.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-15-SJMPAL043775-09B-01R.mirna.quantification.txt	3	20
