Patient_ID Contig_ID Contig size (bp) Genomic regions (NCBI36/hg18) Contig regions Strands Read pairs Spanning reads Rearrangement type Genomic breakpoint Fusion genes Frame Translated junction sequence type TCGA-AB-2803 k42_872514 999 "chr17:35758092-35764104,chr15:72112024-72112808" "344-999,1-345" "+,+" 22 9 translocation chr15:72112808|chr17:35758092 PML(+)RARA(+) In-frame IGSEVFLPNSNHVASGAGEA|AIETQSSSSEEIVPSPPSPP gene_fusion TCGA-AB-2807 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2963 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2826 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2867 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2818 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2808 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2853 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2854 k42_1005781 606 "chr5:128830465-128830772,chr21:35128577-35153747" "1-308,308-606" "+,+" 21 50 translocation chr21:35128577|chr5:128830772 RUNX1(-)ADAMTS19(+) Out-of-frame gene_fusion TCGA-AB-2854 k30_4240305 5678 "chr5:128825286-128830772,chr21:35128577-35128768" "192-5678,1-192" "-,-" 19 45 translocation chr21:35128577|chr5:128830772 RUNX1(+)ADAMTS19(-) Out-of-frame gene_fusion TCGA-AB-2854 k40_1377857 1099 "chr5:128829862-128830772,chr21:35128577-35128756" "180-1090,1-180" "-,-" 18 46 translocation chr21:35128577|chr5:128830772 RUNX1(+)ADAMTS19(-) Out-of-frame gene_fusion TCGA-AB-2854 k38_1836135 11918 "chr21:35103289-35114749,chr5:126900274-126900423" "1-11448,11443-11592" "-,+" 21 16 translocation chr21:35103289|chr5:126900274 RUNX1(+)PRRC1(+) Out-of-frame gene_fusion TCGA-AB-2854 k32_3574168 7011 "chr21:35103289-35109646,chr5:126900274-126900423" "1-6345,6340-6489" "-,+" 21 15 translocation chr21:35103289|chr5:126900274 RUNX1(+)PRRC1(+) Out-of-frame gene_fusion TCGA-AB-2822 k32_4169983 818 "chrX:2148860-2149271,chrX:2139531-2140081" "407-818,1-407" "-,-" 5 5 duplication chrX:2139531|chrX:2149271 NA(NA)DHRSX(+) Out-of-frame lsr TCGA-AB-2805 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2840 k34_1977575 574 "chr17:35740634-35741174,chr15:72104251-72104283" "1-541,542-574" "+,+" 10 39 translocation chr15:72104251|chr17:35741174 PML(+)RARA(+) Out-of-frame gene_fusion TCGA-AB-2840 k32_1249024 655 "chr17:35728143-35741174,chr15:72104251-72104281" "1-624,625-655" "+,+" 10 32 translocation chr15:72104251|chr17:35741174 PML(+)RARA(+) Out-of-frame gene_fusion TCGA-AB-2840 k42_795786 513 "chr17:35740703-35741174,chr15:72104251-72104291" "42-513,1-41" "-,-" 10 41 translocation chr15:72104251|chr17:35741174 PML(-)RARA(-) ??? gene_fusion TCGA-AB-2840 k40_1203527 529 "chr17:35740685-35741174,chr15:72104251-72104289" "40-529,1-39" "-,-" 10 43 translocation chr15:72104251|chr17:35741174 PML(-)RARA(-) ??? gene_fusion TCGA-AB-2840 k36_1147863 541 "chr17:35740669-35741174,chr15:72104251-72104285" "36-541,1-35" "-,-" 10 46 translocation chr15:72104251|chr17:35741174 PML(-)RARA(-) Out-of-frame gene_fusion TCGA-AB-2840 k38_1677961 2892 "chr17:35758092-35766442,chr15:72074140-72102802" "1-1633,1632-2881" "-,-" 31 36 translocation chr15:72102802|chr17:35758092 PML(-)RARA(-) In-frame GFDEFKVRLQDLSSCITQGK|AIETQSSSSEEIVPSPPSPP gene_fusion TCGA-AB-2840 k36_2214247 3150 "chr17:35758092-35766677,chr15:72074106-72102802" "1-1868,1867-3150" "-,-" 31 22 translocation chr15:72102802|chr17:35758092 PML(-)RARA(-) In-frame GFDEFKVRLQDLSSCITQGK|AIETQSSSSEEIVPSPPSPP gene_fusion TCGA-AB-2840 k36_2239955 1058 "chr12:110666828-110667699,chr12:110792456-110793374" "1-872,863-1058" "-,-" 36 16 duplication chr12:110666828|chr12:110793374 ACAD10(-)MAPKAPK5(-) Out-of-frame gene_fusion TCGA-AB-2840 k30_4273320 1297 "chr13:113576206-113583974,chr13:113598795-113599236" "441-1297,1-442" "+,+" 11 5 duplication chr13:113576206|chr13:113599236 GAS6(+)FAM70B(-) Out-of-frame GRPLRCPAVGSHRDCSNHTQ|ALQPLPSCALLCPGFV*GPA gene_fusion TCGA-AB-2833 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2806 k48_243131 1215 "chr8:93092242-93098767,chr21:35153641-35181328" "582-1215,1-581" "-,-" 409 266 translocation chr21:35153641|chr8:93098767 RUNX1(+)RUNX1T1(+) gene_fusion TCGA-AB-2806 k50_81719 1570 "chr8:93067571-93098767,chr21:35153641-35181169" "423-1570,1-422" "-,-" 409 244 translocation chr21:35153641|chr8:93098767 RUNX1(+)RUNX1T1(+) gene_fusion TCGA-AB-2806 k36_2418139 2348 "chr21:35144863-35146095,chr8:93155362-93156489" "1116-2348,1-1123" "+,+" 16 18 translocation chr21:35144863|chr8:93156489 RUNX1(-)RUNX1T1(-) Out-of-frame gene_fusion TCGA-AB-2806 k38_1901083 2295 "chr21:35144863-35146098,chr8:93155418-93156489" "1060-2295,1-1067" "+,+" 16 20 translocation chr21:35144863|chr8:93156489 RUNX1(-)RUNX1T1(-) Out-of-frame gene_fusion TCGA-AB-2806 k30_3947839 310 "chr1:1653541-1653825,chr1:1589627-1589655" "2-286,282-310" "+,+" 6 5 duplication chr1:1589627|chr1:1653825 CDC2L1(-)SLC35E2(-) Out-of-frame gene_fusion TCGA-AB-2828 k30_4387845 3116 "chr3:101831131-101896977,chr3:101911172-101921593" "395-3116,1-396" "+,+" 26 36 duplication chr3:101831131|chr3:101921593 TFG(+)GPR128(+) In-frame SSDLSFAIQCSRILKLTLFG|KSTSSSSTPTEFCRNGGTWE gene_fusion TCGA-AB-2828 k40_1423950 1526 "chr16:15722321-15728414,chr16:65620797-65673713" "1-1018,1016-1526" "+,-" 50 23 inversion chr16:15728414|chr16:65673713 MYH11(-)CBFB(-) ? gene_fusion TCGA-AB-2828 k36_2450066 1048 "chr16:65620724-65673713,chr16:15726005-15728414" "1-584,582-1048" "+,-" 50 39 inversion chr16:15728414|chr16:65673713 MYH11(-)CBFB(-) ? gene_fusion TCGA-AB-2828 k32_3697437 831 "chr16:49303335-49303787,chr16:49375222-49375601" "1-453,452-831" "+,-" 18 13 inversion chr16:49303787|chr16:49375601 NOD2(+)storry(-) ? gene_fusion TCGA-AB-2828 k30_4403659 2584 "chr16:49291081-49303787,chr16:49375226-49375601" "1-2210,2209-2584" "+,-" 18 18 inversion chr16:49303787|chr16:49375601 NOD2(+)storry(-) Out-of-frame SVGDIGVEQLLPCLGVCKAL|*YQDPCEDTHGSIIRTYRSF gene_fusion TCGA-AB-2828 k26_6159844 2614 "chr16:49291049-49303787,chr16:49375228-49375601" "373-2614,1-374" "-,+" 18 11 inversion chr16:49303787|chr16:49375601 NOD2(-)storry(+) Out-of-frame SVGDIGVEQLLPCLGVCKAL|*YQDPCEDTHGSIIRTYRSF gene_fusion TCGA-AB-2819 k46_391603 1109 "chr8:93091874-93098767,chr21:35153641-35153747" "108-1109,1-107" "-,-" 113 100 translocation chr21:35153641|chr8:93098767 RUNX1(+)RUNX1T1(+) ? gene_fusion TCGA-AB-2819 k46_393314 2600 "chr8:93040880-93098767,chr21:35153641-35153747" "1-2493,2494-2600" "+,+" 113 116 translocation chr21:35153641|chr8:93098767 RUNX1(-)RUNX1T1(-) ? gene_fusion TCGA-AB-2819 k26_6391747 657 "chr8:71215973-71219637,chr8:115155699-115155934" "235-657,1-236" "+,+" 13 14 duplication chr8:71215973|chr8:115155934 NCOA2(-)NA(NA) ? lsr TCGA-AB-2819 k32_3785316 1639 "chr21:35132499-35133601,chr8:93143950-93144471" "537-1639,1-522" "+,+" 6 13 translocation chr21:35132499|chr8:93144471 RUNX1(-)RUNX1T1(-) Out-of-frame gene_fusion TCGA-AB-2819 k34_3065156 4163 "chr21:35132499-35136465,chr8:93144284-93144471" "203-4163,1-188" "+,+" 6 19 translocation chr21:35132499|chr8:93144471 RUNX1(-)RUNX1T1(-) Out-of-frame gene_fusion TCGA-AB-2816 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2812 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2814 k34_1492362 443 "chr13:113576206-113576583,chr13:113599170-113599236" "1-378,377-443" "-,-" 8 7 duplication chr13:113576206|chr13:113599236 GAS6(-)FAM70B(+) Out-of-frame GRPLRCPAVGSHRDCSNHTQ|ALQPLPSCALLCPGFV*GPA gene_fusion TCGA-AB-2814 k30_1788371 443 "chr13:113576206-113576583,chr13:113599170-113599236" "1-378,377-443" "-,-" 8 9 duplication chr13:113576206|chr13:113599236 GAS6(-)FAM70B(+) Out-of-frame GRPLRCPAVGSHRDCSNHTQ|ALQPLPSCALLCPGFV*GPA gene_fusion TCGA-AB-2839 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2863 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2815 k28_5101652 1747 "chr16:65680892-65682282,chr16:15722321-15722676" "1-1391,1392-1747" "+,-" 9 8 inversion chr16:15722676|chr16:65682282 MYH11(-)CBFB(-) Out-of-frame gene_fusion TCGA-AB-2815 k44_560416 1096 "chr16:15720584-15722411,chr16:65620798-65673714" "508-1096,1-511" "-,+" 28 27 inversion chr16:15722411|chr16:65673714 MYH11(+)CBFB(+) gene_fusion TCGA-AB-2815 k42_887251 1043 "chr16:15720913-15722411,chr16:65620798-65673714" "508-1043,1-511" "-,+" 28 27 inversion chr16:15722411|chr16:65673714 MYH11(+)CBFB(+) gene_fusion TCGA-AB-2834 k36_2415606 4547 "chr11:117814888-117858420,chr19:18423412-18437730" "734-4547,1-735" "-,+" 24 29 translocation chr11:117858420|chr19:18437730 MLL(-)ELL(-) gene_fusion TCGA-AB-2834 k34_3028689 4576 "chr11:117814888-117858420,chr19:18423395-18437730" "763-4576,13-764" "-,+" 24 29 translocation chr11:117858420|chr19:18437730 MLL(-)ELL(-) In-frame KQKKVAPRPSIPVKQKPKEK|HISIPQPDCPAEARTFSFYL gene_fusion TCGA-AB-2834 k42_887603 3111 "chr11:117848214-117858420,chr19:18437355-18437730" "154-3111,1-155" "-,+" 24 29 translocation chr11:117858420|chr19:18437730 MLL(-)ELL(-) gene_fusion TCGA-AB-2834 k38_1830153 2875 "chr11:117848739-117858420,chr19:18433513-18437730" "8-2439,2438-2875" "+,-" 24 29 translocation chr11:117858420|chr19:18437730 MLL(+)ELL(+) gene_fusion TCGA-AB-2842 k42_854358 5251 "chr10:21915227-22072565,chr11:117854015-117858420" "628-5243,1-629" "+,+" 9 32 translocation chr10:21915227|chr11:117858420 MLLT10(+)MLL(+) gene_fusion TCGA-AB-2842 k40_1204220 2608 "chr11:117848710-117858420,chr10:21915227-21924356" "1-2462,2461-2608" "+,+" 7 32 translocation chr10:21915227|chr11:117858420 MLLT10(+)MLL(+) gene_fusion TCGA-AB-2842 k32_3154568 3800 "chr11:117844700-117858420,chr10:21915227-21924356" "1-3654,3653-3800" "+,+" 7 32 translocation chr10:21915227|chr11:117858420 MLLT10(+)MLL(+) In-frame KQKKVAPRPSIPVKQKPKEK|RCELCPHKDGALKRTDNGGW gene_fusion TCGA-AB-2849 k44_618061 2423 "chr10:21980606-22064171,chr11:85363399-85365374" "165-2423,1-166" "+,-" 18 49 translocation chr10:21980606|chr11:85363399 MLLT10(+)PICALM(+) gene_fusion TCGA-AB-2849 k46_335297 720 "chr11:85363399-85365694,chr10:21980606-21999521" "235-720,1-236" "+,-" 18 49 translocation chr10:21980606|chr11:85363399 MLLT10(+)PICALM(+) gene_fusion TCGA-AB-2849 k28_5050828 2271 "chr11:85345833-85347751,chr10:21924318-21946142" "1-1919,1920-2271" "+,-" 9 33 translocation chr10:21946142|chr11:85347751 MLLT10(+)PICALM(+) Out-of-frame gene_fusion TCGA-AB-2849 k42_978334 2086 "chr11:85346264-85347751,chr10:21863681-21946142" "1-1488,1489-2086" "+,-" 9 33 translocation chr10:21946142|chr11:85347751 MLLT10(+)PICALM(+) gene_fusion TCGA-AB-2964 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2903 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2965 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2966 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2967 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2959 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2917 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2913 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2892 k30_4252434 580 "chr16:65620816-65673714,chr16:15722321-15722411" "88-580,1-91" "-,+" 38 21 inversion chr16:15722411|chr16:65673714 MYH11(+)CBFB(+) In-frame RRRTREFEDRDRSHREEMEV|HELEKSKRALETQMEEMKTQ gene_fusion TCGA-AB-2892 k36_2211757 1004 "chr16:15720819-15722746,chr16:65678488-65678524" "1-965,968-1004" "+,-" 10 12 inversion chr16:15722746|chr16:65678524 MYH11(-)CBFB(-) gene_fusion TCGA-AB-2969 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2970 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2911 k28_5496409 347 "chr7:127927368-127927646,chr7:128032501-128032570" "69-347,1-70" "+,+" 14 12 duplication chr7:127927368|chr7:128032570 METTL2B(+)NA(NA) Out-of-frame lsr TCGA-AB-2911 k30_4683190 1432 "chr11:117850203-117860902,chr19:18423366-18430141" "217-1432,1-220" "-,+" 9 10 translocation chr11:117860902|chr19:18430141 MLL(-)ELL(-) In-frame VPITPRVVCFLCASSGHVEV|ANMSAKDGTCTLQDCMYKDV gene_fusion TCGA-AB-2911 k36_2450247 4054 "chr11:117844698-117860902,chr19:18430014-18430141" "1-3904,3901-4028" "+,-" 7 10 translocation chr11:117860902|chr19:18430141 MLL(+)ELL(+) In-frame VPITPRVVCFLCASSGHVEV|ANMSAKDGTCTLQDCMYKDV gene_fusion TCGA-AB-2904 k44_307311 1083 "chr20:30849987-30853937,chr1:202761233-202773983" "1-681,680-1083" "+,+" 13 54 translocation chr1:202761233|chr20:30853937 MDM4(+)DNMT3B(+) ??? gene_fusion TCGA-AB-2904 k38_1380115 1981 "chr20:30846873-30853937,chr1:202761233-202768492" "874-1981,1-875" "-,-" 13 53 translocation chr1:202761233|chr20:30853937 MDM4(-)DNMT3B(-) Out-of-frame IKVSAAHRARYFWGNLPGMN|SFTNRLQFLHYQNDIIFHLC gene_fusion TCGA-AB-2904 k38_1391279 3010 "chr1:202761233-202785895,chr20:30846873-30853937" "1107-3010,1-1108" "+,+" 13 55 translocation chr1:202761233|chr20:30853937 MDM4(+)DNMT3B(+) ??? gene_fusion TCGA-AB-2904 k26_419039 185 "chr1:116020728-116020825,chr1:107022640-107022727" "88-185,1-88" "-,+" 11 3 inversion chr1:107022727|chr1:116020825 NA(NA)VANGL1(+) In-frame PSLQYFSWYKCQLALKSHNV|RCDPLWHLTWNRIVERDRLS lsr TCGA-AB-2912 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2912 k45_147213 981 "chr19:54669670 -54681249, chr19:54693013 -54693115" "102-981, 1-103" duplication chr19:54693115|chr19:54669670 RPS11(+)FLT3LG(+) In-frame YNRFEKRHKNMSVHLSPCFR|PGDRRHEGPPAEMTVLAPAW gene_fusion TCGA-AB-2971 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2972 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2973 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2916 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2914 k44_708934 546 "chr16:65621176-65673714,chr16:15722236-15722411" "1-374,371-546" "+,-" 35 22 inversion chr16:15722411|chr16:65673714 MYH11(-)CBFB(-) In-frame RRRTREFEDRDRSHREEMEV|HELEKSKRALETQMEEMKTQ gene_fusion TCGA-AB-2914 k34_3338257 1878 "chr3:71206527-71207656,chr3:196748071-196748813" "1-1130,1136-1878" "-,+" 18 9 inversion chr3:71206527|chr3:196748071 FOXP1(+)PPP1R2(-) Out-of-frame gene_fusion TCGA-AB-2914 k32_4017262 1843 "chr3:71206527-71207618,chr3:196748071-196748816" "1-1092,1098-1843" "-,+" 18 9 inversion chr3:71206527|chr3:196748071 FOXP1(+)PPP1R2(-) Out-of-frame gene_fusion TCGA-AB-2955 k26_3319959 300 "chr9:114844411-114844598,chr1:19374402-19374507" "113-300,1-106" "-,-" 7 5 translocation chr1:19374402|chr9:114844598 UBR4(+)ZFP37(+) Out-of-frame gene_fusion TCGA-AB-2975 k26_6331333 2900 "chr2:60595872-60598575,chr3:14519785-14519964" "1-2704,2707-2886" "+,+" 7 7 translocation chr2:60598575|chr3:14519785 BCL11A(-)GRIP2(-) Out-of-frame N/A gene_fusion TCGA-AB-2976 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2933 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2883 k26_6994589 5483 "chr11:117844712-117860240,chr6:168008073-168054840" "1-3775,3768-5483" "+,+" 23 23 translocation chr11:117860240|chr6:168008073 MLL(+)MLLT4(+) In-frame NSSKQKIPADGVHRIRVDFK|DLEFHGVMRFYFQDKAAGNF gene_fusion TCGA-AB-2883 k26_7020734 2616 "chr11:117849993-117860240,chr6:168008073-168041875" "1-1311,1304-2616" "+,+" 23 23 translocation chr11:117860240|chr6:168008073 MLL(+)MLLT4(+) In-frame NSSKQKIPADGVHRIRVDFK|DLEFHGVMRFYFQDKAAGNF gene_fusion TCGA-AB-2883 k36_2693788 2698 "chr11:117848702-117860240,chr6:168008073-168008175" "96-2698,1-103" "-,-" 23 23 translocation chr11:117860240|chr6:168008073 MLL(-)MLLT4(-) In-frame NSSKQKIPADGVHRIRVDFK|DLEFHGVMRFYFQDKAAGNF gene_fusion TCGA-AB-2883 k32_4179990 3887 "chr11:117844712-117860240,chr6:168008073-168008178" "1-3775,3768-3873" "+,+" 23 23 translocation chr11:117860240|chr6:168008073 MLL(+)MLLT4(+) In-frame NSSKQKIPADGVHRIRVDFK|DLEFHGVMRFYFQDKAAGNF gene_fusion TCGA-AB-2978 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2980 k38_1668095 2143 "chr15:72074295-72102802,chr17:35758092-35765841" "1-1095,1094-2143" "+,+" 25 23 translocation chr15:72102802|chr17:35758092 PML(+)RARA(+) gene_fusion TCGA-AB-2980 k30_3932002 1133 "chr17:35758092-35765897,chr15:72102774-72102802" "1-1106,1105-1133" "-,-" 24 15 translocation chr15:72102802|chr17:35758092 PML(-)RARA(-) gene_fusion TCGA-AB-2980 k26_5652427 1340 "chr15:72074271-72102802,chr17:35758092-35759611" "200-1318,1-201" "-,-" 25 23 translocation chr15:72102802|chr17:35758092 PML(-)RARA(-) In-frame GFDEFKVRLQDLSSCITQGK|AIETQSSSSEEIVPSPPSPP gene_fusion TCGA-AB-2980 k26_5571589 671 "chr17:35728167-35741174,chr15:72104251-72104321" "72-671,1-71" "-,-" 4 20 translocation chr15:72104251|chr17:35741174 PML(-)RARA(-) Out-of-frame gene_fusion TCGA-AB-2942 k38_1473061 2827 "chr16:15704520-15722411,chr16:65620650-65673714" "1-2172,2169-2827" "+,-" 15 25 inversion chr16:15722411|chr16:65673714 MYH11(-)CBFB(-) In-frame RRRTREFEDRDRSHREEMEV|HELEKSKRALETQMEEMKTQ gene_fusion TCGA-AB-2942 k28_4713649 1180 "chr16:15719718-15722690,chr16:65680230-65680463" "228-1180,1-234" "-,+" 8 17 inversion chr16:15722690|chr16:65680463 MYH11(+)CBFB(+) Out-of-frame gene_fusion TCGA-AB-2942 k26_5722508 1630 "chr16:65679196-65680463,chr16:15722322-15722690" "1-1268,1262-1630" "+,-" 8 17 inversion chr16:15722690|chr16:65680463 MYH11(-)CBFB(-) Out-of-frame gene_fusion TCGA-AB-2876 k40_1375664 3199 "chr8:130303748-130305560,chr8:130963180-130964567" "1387-3199,1-1388" "+,-" 97 107 inversion chr8:130303748|chr8:130963180 CR593328(-)FAM49B(+) Out-of-frame gene_fusion TCGA-AB-2876 k44_634676 3090 "chr8:130303748-130305566,chr8:130963180-130964452" "1272-3090,1-1273" "+,-" 97 114 inversion chr8:130303748|chr8:130963180 CR593328(-)FAM49B(+) Out-of-frame gene_fusion TCGA-AB-2876 k44_635640 3547 "chr8:128999154-129002131,chr8:131196433-131197372" "937-3547,4-943" "-,+" 43 61 inversion chr8:129002131|chr8:131197372 PVT1(-)ASAP1(-) Out-of-frame gene_fusion TCGA-AB-2876 k34_2977157 641 "chr8:128972017-128972426,chr8:131193520-131193752" "1-410,409-641" "+,-" 55 6 inversion chr8:128972426|chr8:131193752 PVT1(+)ASAP1(+) Out-of-frame gene_fusion TCGA-AB-2876 k44_642057 623 "chr8:128876058-128972426,chr8:131197056-131197165" "1-515,514-623" "+,-" 119 123 inversion chr8:128972426|chr8:131197165 PVT1(+)ASAP1(+) Out-of-frame gene_fusion TCGA-AB-2876 k48_199868 839 "chr8:128876084-128972426,chr8:131193509-131197165" "1-489,488-839" "+,-" 184 121 inversion chr8:128972426|chr8:131197165 PVT1(+)ASAP1(+) Out-of-frame gene_fusion TCGA-AB-2876 k34_2953998 5805 "chr8:128997041-129002131,chr8:131196291-131197372" "7-4730,4724-5805" "+,-" 43 57 inversion chr8:129002131|chr8:131197372 PVT1(+)ASAP1(+) Out-of-frame gene_fusion TCGA-AB-2876 k38_1837058 5803 "chr8:128997042-129002131,chr8:131196286-131197372" "1-4723,4717-5803" "+,-" 43 60 inversion chr8:129002131|chr8:131197372 PVT1(+)ASAP1(+) Out-of-frame gene_fusion TCGA-AB-2876 k36_2369195 5803 "chr8:128997041-129002131,chr8:131196289-131197372" "3-4726,4720-5803" "+,-" 43 59 inversion chr8:129002131|chr8:131197372 PVT1(+)ASAP1(+) Out-of-frame gene_fusion TCGA-AB-2876 k48_199507 2900 "chr8:126512553-126518945,chr8:130533431-130534386" "958-2900,1-956" "-,-" 268 332 deletion chr8:126518945|chr8:130533431 TRIB1(-)NA(NA) Out-of-frame lsr TCGA-AB-2876 k42_977587 2161 "chr8:126517428-126518945,chr8:130533431-130534693" "1-1518,1520-2161" "+,+" 264 336 deletion chr8:126518945|chr8:130533431 TRIB1(+)NA(NA) Out-of-frame lsr TCGA-AB-2876 k42_976832 2182 "chr8:126512438-126518945,chr8:130533431-130533553" "1-2058,2060-2182" "+,+" 268 328 deletion chr8:126518945|chr8:130533431 TRIB1(+)NA(NA) Out-of-frame lsr TCGA-AB-2876 k40_1377186 2341 "chr8:126512438-126518945,chr8:130533431-130533553" "1-2217,2219-2341" "+,+" 268 319 deletion chr8:126518945|chr8:130533431 TRIB1(+)NA(NA) Out-of-frame lsr TCGA-AB-2876 k38_1857158 2669 "chr8:126517428-126518945,chr8:130533431-130534580" "1-1518,1520-2669" "+,+" 264 328 deletion chr8:126518945|chr8:130533431 TRIB1(+)NA(NA) Out-of-frame lsr TCGA-AB-2878 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2880 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2893 k34_2194431 77 "chr6:168008078-168008125,chr11:117858390-117858421" "1-48,46-77" "-,-" 13 11 translocation chr11:117858421|chr6:168008078 MLL(-)MLLT4(-) In-frame??? FILKIKSHHSMELQIL|FFWFLFYRD gene_fusion TCGA-AB-2893 k36_1508390 133 "chr6:167970667-167970766,chr11:117857638-117857672" "1-100,99-133" "+,+" 14 4 translocation chr11:117857638|chr6:167970766 MLL(+)MLLT4(+) In-frame??? GLRLFLFLFHS|SVGWLISNRSSRLAFQWWMM gene_fusion TCGA-AB-2893 k28_46944 136 "chr6:167970656-167970766,chr11:117857638-117857664" "1-111,110-136" "+,+" 14 4 translocation chr11:117857638|chr6:167970766 MLL(+)MLLT4(+) In-frame??? LFLFLFHS|SVGWLISNRSSRLAFQWWMM gene_fusion TCGA-AB-2983 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2894 k32_4224795 1597 "chr11:117849961-117857830,chr9:20336378-20355742" "649-1597,4-648" "-,+" 10 10 translocation chr11:117857830|chr9:20355742 MLL(-)MLLT3(-) In-frame KSSSEPPPRKPVEEKSEEGN|SEQPSPASSSSSSSSSFTPS gene_fusion TCGA-AB-2894 k36_2892086 4060 "chr11:117844698-117857830,chr9:20336378-20355742" "647-4041,2-646" "-,+" 10 10 translocation chr11:117857830|chr9:20355742 MLL(-)MLLT3(-) In-frame KSSSEPPPRKPVEEKSEEGN|SEQPSPASSSSSSSSSFTPS gene_fusion TCGA-AB-2894 k40_1782905 4698 "chr11:117844698-117857830,chr9:20335738-20355742" "20-3414,3415-4698" "+,-" 10 10 translocation chr11:117857830|chr9:20355742 MLL(+)MLLT3(+) In-frame KSSSEPPPRKPVEEKSEEGN|SEQPSPASSSSSSSSSFTPS gene_fusion TCGA-AB-2894 k34_3496328 3768 "chr11:117844698-117857832,chr9:20402761-20403113" "20-3416,3416-3768" "+,-" 6 7 translocation chr11:117857832|chr9:20403113 MLL(+)MLLT3(+) Out-of-frame SSSEPPPRKPVEEKSEEGNV|IFFFIV*PLIWKGWGM*SSF gene_fusion TCGA-AB-2894 k32_4188528 3591 "chr11:117844700-117857832,chr9:20402917-20403113" "1-3395,3395-3591" "+,-" 6 7 translocation chr11:117857832|chr9:20403113 MLL(+)MLLT3(+) Out-of-frame gene_fusion TCGA-AB-2894 k26_6791876 3801 "chr11:117844700-117857832,chr9:20402707-20403113" "407-3801,1-407" "-,+" 6 7 translocation chr11:117857832|chr9:20403113 MLL(-)MLLT3(-) Out-of-frame gene_fusion TCGA-AB-2937 k42_754358 2607 "chr8:93040817-93098767,chr21:35153641-35153747" "108-2607,1-107" "-,-" 190 190 translocation chr21:35153641|chr8:93098767 RUNX1(+)RUNX1T1(+) In-frame QVATYHRAIKITVDGPREPR|NRTEKHSTMPDSPVDVKTQS gene_fusion TCGA-AB-2937 k46_297424 1542 "chr8:93073067-93098767,chr21:35153641-35181410" "664-1542,1-663" "-,-" 219 192 translocation chr21:35153641|chr8:93098767 RUNX1(+)RUNX1T1(+) In-frame QVATYHRAIKITVDGPREPR|NRTEKHSTMPDSPVDVKTQS gene_fusion TCGA-AB-2984 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2985 k38_1488945 993 "chr11:116772153-116772656,chr10:21947973-21948460" "3-506,506-993" "+,-" 44 78 translocation chr10:21948460|chr11:116772656 MLLT10(+)CEP164(-) Out-of-frame gene_fusion TCGA-AB-2985 k28_4417213 1155 "chr11:116771980-116772656,chr10:21947982-21948460" "1-677,677-1155" "+,-" 44 68 translocation chr10:21948460|chr11:116772656 MLLT10(+)CEP164(-) Out-of-frame gene_fusion TCGA-AB-2985 k38_1480394 1163 "chr11:116771612-116772656,chr10:21947973-21948460" "488-1163,1-488" "-,+" 44 77 translocation chr10:21948460|chr11:116772656 MLLT10(-)CEP164(+) Out-of-frame gene_fusion TCGA-AB-2985 k32_3078145 1011 "chr11:116772127-116772656,chr10:21947979-21948460" "1-530,530-1011" "+,-" 44 65 translocation chr10:21948460|chr11:116772656 MLLT10(+)CEP164(-) Out-of-frame gene_fusion TCGA-AB-2985 k34_1995383 204 "chr10:21940416-21940592,chr11:116772507-116772537" "1-177,174-204" "+,-" 5 9 translocation chr10:21940592|chr11:116772537 MLLT10(+)CEP164(-) Out-of-frame gene_fusion TCGA-AB-2985 k30_3710814 322 "chr10:21940295-21940592,chr11:116772510-116772537" "1-298,295-322" "+,-" 5 6 translocation chr10:21940592|chr11:116772537 MLLT10(+)CEP164(-) Out-of-frame gene_fusion TCGA-AB-2985 k28_4436423 391 "chr10:21940226-21940592,chr11:116772512-116772537" "1-369,366-391" "+,-" 5 6 translocation chr10:21940592|chr11:116772537 MLLT10(+)CEP164(-) Out-of-frame gene_fusion TCGA-AB-2985 k32_3110452 647 "chr10:21980606-22002548,chr11:117860870-117860900" "30-647,1-31" "+,+" 9 6 translocation chr10:21980606|chr11:117860900 MLLT10(+)MLL(+) In-frame FLCASSGHVE|KYKEKDKHKQKHKKQPEPSP gene_fusion TCGA-AB-2986 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2987 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2991 k44_596053 2264 "chr15:72074258-72102802,chr17:35758092-35765925" "1-1132,1131-2264" "+,+" 50 35 translocation chr15:72102802|chr17:35758092 PML(+)RARA(+) gene_fusion TCGA-AB-2991 k38_1633291 1911 "chr15:72074108-72102802,chr17:35758092-35762285" "630-1911,1-631" "-,-" 49 35 translocation chr15:72102802|chr17:35758092 PML(-)RARA(-) gene_fusion TCGA-AB-2991 k32_2977670 813 "chr15:72102264-72102815,chr17:35748106-35748368" "1-552,551-813" "+,+" 26 17 translocation chr15:72102815|chr17:35748106 PML(+)RARA(+) gene_fusion TCGA-AB-2991 k34_2464850 1469 "chr15:72074108-72102815,chr17:35748106-35748281" "1-1295,1294-1469" "+,+" 26 17 translocation chr15:72102815|chr17:35748106 PML(+)RARA(+) Out-of-frame KVRLQDLSSCITQGKGKHAR|GIGPPRVDWRPLNLWLSEIE gene_fusion TCGA-AB-2991 k26_4800839 699 "chr17:35728139-35741174,chr15:72104251-72104321" "1-628,629-699" "+,+" 11 12 translocation chr15:72104251|chr17:35741174 PML(+)RARA(+) gene_fusion TCGA-AB-2820 k44_603068 1237 "chr3:117043318-117646494,chr3:119198718-119199106" "1-851,849-1237" "+,+" 17 23 deletion chr3:117646494|chr3:119198718 LSAMP(-)NA(NA) In-frame TYWLHSVWVLGFFLSLFSLQ|GLPVRSVDFNRGTDNITVRQ lsr TCGA-AB-2820 k42_923663 1240 "chr3:117043373-117646494,chr3:119198718-119199106" "387-1240,1-389" "-,-" 17 23 deletion chr3:117646494|chr3:119198718 LSAMP(+)NA(NA) In-frame TYWLHSVWVLGFFLSLFSLQ|GLPVRSVDFNRGTDNITVRQ lsr TCGA-AB-2820 k30_3821432 1415 "chr3:117011769-117646494,chr3:119198718-119199107" "388-1415,1-390" "-,-" 17 23 deletion chr3:117646494|chr3:119198718 LSAMP(+)NA(NA) In-frame TYWLHSVWVLGFFLSLFSLQ|GLPVRSVDFNRGTDNITVRQ lsr TCGA-AB-2820 k34_2722620 2423 "chr17:27720424-27722629,chr17:25828556-25835915" "1-2062,2059-2423" "-,-" 12 16 deletion chr17:25835915|chr17:27720424 GOSR1(-)ZNF207(-) In-frame VPSLNAALMHTLQRHRDILQ|EERRAQLPKYQRNLPRPGQA gene_fusion TCGA-AB-2992 k32_2352484 136 "chr16:30512078-30512185,chr16:31426586-31426615" "1-108,107-136" "+,+" 14 7 deletion chr16:30512185|chr16:31426586 NA(NA)C16orf58(-) Out-of-frame lsr TCGA-AB-2993 k28_5141270 2323 "chr6:127697701-127699878,chr6:127797457-127797607" "146-2323,1-151" "+,+" 9 5 duplication chr6:127697701|chr6:127797607 ECHDC1(-)NA(NA) Out-of-frame lsr TCGA-AB-2994 k38_1891946 2073 "chr17:35758092-35766606,chr15:72112549-72112808" "259-2073,1-260" "+,+" 20 15 translocation chr15:72112808|chr17:35758092 PML(+)RARA(+) gene_fusion TCGA-AB-2994 k30_3972760 515 "chr17:35752358-35759611,chr15:72113486-72113514" "1-487,487-515" "-,-" 24 3 translocation chr15:72113514|chr17:35752358 PML(-)RARA(-) gene_fusion TCGA-AB-2994 k32_3373702 602 "chr17:35752358-35759703,chr15:72113491-72113514" "1-579,579-602" "-,-" 24 3 translocation chr15:72113514|chr17:35752358 PML(-)RARA(-) gene_fusion TCGA-AB-2994 k38_1290176 232 "chr17:35752227-35752347,chr15:72113524-72113629" "112-232,1-106" "-,-" 21 5 translocation chr15:72113524|chr17:35752347 PML(-)RARA(-) In-frame ATWSGTFCNPKEAHCPHSQL|RGAPCPEVPASKSAGRSASP gene_fusion TCGA-AB-2994 k36_309599 196 "chr17:35752192-35752347,chr15:72113524-72113558" "1-156,162-196" "+,+" 21 4 translocation chr15:72113524|chr17:35752347 PML(+)RARA(+) In-frame AILKKHTVPILNS|GAPPALKSPRLSPPAAPPVP gene_fusion TCGA-AB-2994 k30_3975161 485 "chr17:35751897-35752347,chr15:72113524-72113552" "1-451,457-485" "+,+" 21 3 translocation chr15:72113524|chr17:35752347 PML(+)RARA(+) In-frame LKKHTVPILNS|GAPPALKSPRLSPPAAPPVP gene_fusion TCGA-AB-2994 k34_1072439 195 "chr17:35752191-35752347,chr15:72113524-72113556" "1-157,163-195" "+,+" 21 4 translocation chr15:72113524|chr17:35752347 PML(+)RARA(+) In-frame GTGGAAGGLRRGDFRAGGAP|ELRMGTVCFFRI gene_fusion TCGA-AB-2994 k40_1387283 193 "chr17:35752040-35752195,chr15:72113870-72113908" "38-193,1-39" "-,-" 18 13 translocation chr15:72113870|chr17:35752195 PML(-)RARA(-) In-frame VFRAADHHNAFL|SRGLPSRVSWRPRQSTAAPQ gene_fusion TCGA-AB-2994 k42_685339 147 "chr17:35752088-35752195,chr15:72113870-72113910" "1-108,107-147" "+,+" 18 14 translocation chr15:72113870|chr17:35752195 PML(+)RARA(+) In-frame ESSELLITTTRSS|RGDSRLESRGVRGRVQRLPK gene_fusion TCGA-AB-2994 k48_142198 613 "chr17:35740629-35741174,chr15:72113872-72113924" "10-556,557-609" "+,+" 57 90 translocation chr15:72113872|chr17:35741174 PML(+)RARA(+) gene_fusion TCGA-AB-2994 k36_2352228 786 "chr17:35728034-35741174,chr15:72113872-72113924" "1-733,734-786" "+,+" 57 94 translocation chr15:72113872|chr17:35741174 PML(+)RARA(+) gene_fusion TCGA-AB-2821 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2995 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2996 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2925 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2870 k44_520309 2588 "chr16:15704630-15722411,chr16:65620779-65673714" "1-2062,2059-2588" "+,-" 78 49 inversion chr16:15722411|chr16:65673714 MYH11(-)CBFB(-) Out-of-frame gene_fusion TCGA-AB-2870 k38_1516343 1522 "chr17:75607653-75608731,chr17:75894647-75897567" "445-1522,1-446" "+,+" 10 9 duplication chr17:75607653|chr17:75897567 TBC1D16(-)KIAA1618(+) Out-of-frame gene_fusion TCGA-AB-2870 k40_1142130 647 "chr17:75894647-75897567,chr17:75612235-75612437" "1-446,445-647" "+,+" 8 8 duplication chr17:75612235|chr17:75897567 TBC1D16(-)KIAA1618(+) Out-of-frame gene_fusion TCGA-AB-2870 k38_1492078 795 "chr17:75894647-75897567,chr17:75612235-75614381" "1-446,445-795" "+,+" 8 8 duplication chr17:75612235|chr17:75897567 TBC1D16(-)KIAA1618(+) Out-of-frame gene_fusion TCGA-AB-2870 k38_1476512 1767 "chr12:31293474-31295535,chr12:9445609-9446419" "244-1767,1-244" "-,-" 4 22 duplication chr12:9445609|chr12:31295535 NA(NA)NA(NA) Out-of-frame lsr TCGA-AB-2870 k42_803651 1988 "chr12:31293767-31295535,chr12:9445609-9456118" "1-1231,1231-1988" "+,+" 4 22 duplication chr12:9445609|chr12:31295535 NA(NA)NA(NA) Out-of-frame lsr TCGA-AB-2884 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2929 k26_6078635 1415 "chr3:117011773-117646494,chr3:119198718-119199111" "392-1415,1-394" "-,-" 11 12 deletion chr3:117646494|chr3:119198718 LSAMP(+)NA(NA) In-frame YWLHSVWVLGFFLSLFSLQG|LPVRSVDFNRGTDNITVRQG lsr TCGA-AB-2950 k48_142666 2472 "chr8:93040948-93098767,chr21:35153641-35153687" "48-2472,1-47" "-,-" 308 238 translocation chr21:35153641|chr8:93098767 RUNX1(+)RUNX1T1(+) In-frame HRAIKITVDGPREPR|NRTEKHSTMPDSPVDVKTQS gene_fusion TCGA-AB-2950 k44_587491 578 "chr8:93092405-93098767,chr21:35153641-35153747" "108-578,1-107" "-,-" 308 238 translocation chr21:35153641|chr8:93098767 RUNX1(+)RUNX1T1(+) In-frame VATYHRAIKITVDGPREPR|NRTEKHSTMPDSPVDVKTQS gene_fusion TCGA-AB-2950 k44_585781 742 "chr8:93092405-93144113,chr21:35153640-35153747" "1-635,635-742" "+,+" 353 31 translocation chr21:35153640|chr8:93144113 RUNX1(-)RUNX1T1(-) In-frame SRHLPQSHQNHSGWAPRTSK|RTRPAPCLRRCRPSPSDGPP gene_fusion TCGA-AB-2950 k38_1653303 14617 "chr8:93141959-93149531,chr21:35129428-35136471" "1-7573,7573-14617" "+,+" 15 20 translocation chr21:35129428|chr8:93149531 RUNX1(-)RUNX1T1(-) gene_fusion TCGA-AB-2950 k42_867095 9893 "chr21:35129428-35136474,chr8:93146686-93149531" "2846-9893,1-2846" "+,+" 15 20 translocation chr21:35129428|chr8:93149531 RUNX1(-)RUNX1T1(-) gene_fusion TCGA-AB-2877 k30_3758000 3238 "chr3:101831131-101896967,chr3:101914962-101921593" "1-2712,2711-3238" "-,-" 19 28 duplication chr3:101831131|chr3:101921593 TFG(-)GPR128(-) In-frame SSDLSFAIQCSRILKLTLFG|KSTSSSSTPTEFCRNGGTWE gene_fusion TCGA-AB-2877 k28_4346901 2525 "chr3:101831131-101861618,chr3:101915068-101921593" "1-2106,2105-2525" "-,-" 19 28 duplication chr3:101831131|chr3:101921593 TFG(-)GPR128(-) In-frame SSDLSFAIQCSRILKLTLFG|KSTSSSSTPTEFCRNGGTWE gene_fusion TCGA-AB-2877 k30_3776993 891 "chr3:101914962-101921593,chr3:101831131-101833253" "1-528,527-891" "+,+" 19 28 duplication chr3:101831131|chr3:101921593 TFG(+)GPR128(+) In-frame SSDLSFAIQCSRILKLTLFG|KSTSSSSTPTEFCRNGGTWE gene_fusion TCGA-AB-2998 k42_876585 2810 "chr17:35758092-35766481,chr15:72074268-72102802" "1-1690,1689-2810" "-,-" 42 48 translocation chr15:72102802|chr17:35758092 PML(-)RARA(-) In-frame FDEFKVRLQDLSSCITQGK|AIETQSSSSEEIVPSPPSPP gene_fusion TCGA-AB-2998 k36_1916450 1439 "chr15:72074242-72102802,chr17:35758092-35759703" "292-1439,1-293" "-,-" 42 40 translocation chr15:72102802|chr17:35758092 PML(-)RARA(-) In-frame FDEFKVRLQDLSSCITQGK|AIETQSSSSEEIVPSPPSPP gene_fusion TCGA-AB-2998 k34_2343372 959 "chr17:35728120-35741175,chr15:72112550-72113924" "1-648,648-959" "+,+" 15 14 translocation chr15:72112550|chr17:35741175 PML(+)RARA(+) gene_fusion TCGA-AB-2998 k34_2344208 1103 "chr17:35728120-35741174,chr15:72111966-72113924" "1-647,648-1103" "+,+" 21 9 translocation chr15:72111966|chr17:35741174 PML(+)RARA(+) Out-of-frame L*PLSSTSFQLVDIAHHPQP|PEEAERVKAQVQALGLAEAQ gene_fusion TCGA-AB-2874 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2890 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2885 k32_2915437 574 "chr3:4325545-4325852,chr12:116565813-116566035" "1-308,309-531" "+,+" 7 9 translocation chr12:116565813|chr3:4325852 KSR2(-)SETMAR(+) gene_fusion TCGA-AB-2885 k26_4868895 960 "chr3:117044007-117646494,chr3:119198718-119198996" "277-960,1-279" "-,-" 6 6 deletion chr3:117646494|chr3:119198718 LSAMP(+)NA(NA) In-frame YWLHSVWLLGFFLSLFSLQG|LPVRSVDFNRGTDNITVRQG lsr TCGA-AB-2900 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2891 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2898 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2901 k48_140517 425 "chr9:132719272-132720166,chr22:21962524-21962600" "1-332,333-409" "-,-" 29 41 translocation chr22:21962600|chr9:132719272 BCR(-)ABL1(-) In-frame GLYGFLNVIVHSATGFKQSS|KALQRPVASDFEPQGLSEAA gene_fusion TCGA-AB-2901 k40_1267764 5323 "chr9:132719272-132752823,chr22:21962524-21962600" "1-5246,5247-5323" "-,-" 29 43 translocation chr22:21962600|chr9:132719272 BCR(-)ABL1(-) In-frame GLYGFLNVIVHSATGFKQSS|KALQRPVASDFEPQGLSEAA gene_fusion TCGA-AB-2901 k34_2548876 1861 "chr22:21963396-21964598,chr9:132665491-132666156" "659-1861,1-666" "-,-" 7 7 translocation chr22:21964598|chr9:132665491 BCR(-)ABL1(-) gene_fusion TCGA-AB-2901 k26_5061118 1853 "chr22:21963395-21964598,chr9:132665491-132666144" "647-1850,1-654" "-,-" 7 7 translocation chr22:21964598|chr9:132665491 BCR(-)ABL1(-) gene_fusion TCGA-AB-2901 k36_2130155 1521 "chr9:132578671-132579663,chr22:21964727-21984011" "529-1521,1-529" "-,-" 7 15 translocation chr22:21964727|chr9:132579663 BCR(-)ABL1(-) gene_fusion TCGA-AB-2901 k30_3719794 1496 "chr9:132578569-132579663,chr22:21964727-21982621" "1-1095,1095-1496" "+,+" 7 15 translocation chr22:21964727|chr9:132579663 BCR(+)ABL1(+) gene_fusion TCGA-AB-2901 k34_2614913 1335 "chr6:110212864-110253301,chr6:108304461-108311043" "359-1335,1-360" "+,-" 4 16 inversion chr6:108304461|chr6:110212864 SEC63(-)FIG4(-) gene_fusion TCGA-AB-2901 k40_1269492 2357 "chr6:108304461-108336933,chr6:110212864-110253272" "1-1411,1410-2357" "-,+" 4 17 inversion chr6:108304461|chr6:110212864 SEC63(+)FIG4(+) Out-of-frame KEQTLISMPYHVCTLKDTEE|LYLLVDTRGDKAFTIAL**S gene_fusion TCGA-AB-2881 k42_874062 2705 "chr16:15704496-15722411,chr16:65620796-65673714" "1-2196,2193-2705" "+,-" 22 28 inversion chr16:15722411|chr16:65673714 MYH11(-)CBFB(-) In-frame RRRTREFEDRDRSHREEMEV|HELEKSKRALETQMEEMKTQ gene_fusion TCGA-AB-2881 k34_2536324 721 "chr16:65620675-65673714,chr16:15722321-15722411" "1-634,631-721" "+,-" 22 26 inversion chr16:15722411|chr16:65673714 MYH11(-)CBFB(-) gene_fusion TCGA-AB-2881 k34_2497294 620 "chr16:15722197-15722764,chr16:65683209-65683262" "1-568,567-620" "+,-" 4 11 inversion chr16:15722764|chr16:65683262 MYH11(-)CBFB(-) gene_fusion TCGA-AB-2873 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2897 k30_3940974 2508 "chr17:35749134-35751274,chr15:72112549-72112919" "1-2141,2138-2508" "-,-" 4 19 translocation chr15:72112919|chr17:35749134 PML(-)RARA(-) gene_fusion TCGA-AB-2897 k26_5427920 410 "chr15:72112549-72112808,chr17:35758092-35758243" "1-260,259-410" "+,+" 25 12 translocation chr15:72112808|chr17:35758092 PML(+)RARA(+) In-frame IGSEVFLPNSNHVASGAGEA|AIETQSSSSEEIVPSPPSPP gene_fusion TCGA-AB-2897 k42_1138250 1560 "chr19:1992197-1997468,chr19:616508-616620" "112-1560,1-113" "+,+" 8 13 deletion chr19:616620|chr19:1992197 NA(NA)MKNK2(-) Out-of-frame lsr TCGA-AB-2869 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2871 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2895 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2887 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2879 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2889 k44_493542 2594 "chr16:15704608-15722411,chr16:65620795-65673714" "1-2084,2081-2594" "+,-" 51 31 inversion chr16:15722411|chr16:65673714 MYH11(-)CBFB(-) In-frame RRRTREFEDRDRSHREEMEV|HELEKSKRALETQMEEMKTQ gene_fusion TCGA-AB-2875 k32_2859663 6250 "chr8:93143950-93147993,chr21:35139469-35141677" "1-4045,4044-6250" "+,+" 27 47 translocation chr21:35139469|chr8:93147993 RUNX1(-)RUNX1T1(-) gene_fusion TCGA-AB-2875 k38_1478579 6222 "chr8:93143950-93147993,chr21:35139469-35141645" "1-4045,4044-6222" "+,+" 27 47 translocation chr21:35139469|chr8:93147993 RUNX1(-)RUNX1T1(-) gene_fusion TCGA-AB-2875 k34_2355821 6220 "chr8:93143950-93147993,chr21:35139469-35141645" "2176-6220,1-2177" "-,-" 27 47 translocation chr21:35139469|chr8:93147993 RUNX1(+)RUNX1T1(+) gene_fusion TCGA-AB-2875 k42_811978 2258 "chr8:93141963-93144113,chr21:35153640-35153747" "1-2151,2151-2258" "+,+" 19 16 translocation chr21:35153640|chr8:93144113 RUNX1(-)RUNX1T1(-) gene_fusion TCGA-AB-2875 k44_536656 1298 "chr8:93067528-93098767,chr21:35153641-35153747" "108-1298,1-107" "-,-" 220 249 translocation chr21:35153641|chr8:93098767 RUNX1(+)RUNX1T1(+) In-frame QVATYHRAIKITVDGPREPR|NRTEKHSTMPDSPVDVKTQS gene_fusion TCGA-AB-2875 k46_176120 1276 "chr8:93057336-93098767,chr21:35153641-35153683" "44-1276,1-43" "-,-" 220 229 translocation chr21:35153641|chr8:93098767 RUNX1(+)RUNX1T1(+) In-frame RAIKITVDGPREPR|NRTEKHSTMPDSPVDVKTQS gene_fusion TCGA-AB-2875 k50_2660 484 "chr21:35153641-35181166,chr8:93098703-93098767" "66-484,1-65" "+,+" 237 251 translocation chr21:35153641|chr8:93098767 RUNX1(-)RUNX1T1(-) In-frame QVATYHRAIKITVDGPREPR|NRTEKHSTMPDSPVDVKTQS gene_fusion TCGA-AB-2886 k44_593048 2575 "chr8:93040905-93098767,chr21:35153641-35153747" "108-2575,1-107" "-,-" 338 371 translocation chr21:35153641|chr8:93098767 RUNX1(+)RUNX1T1(+) In-frame QVATYHRAIKITVDGPREPR|NRTEKHSTMPDSPVDVKTQS gene_fusion TCGA-AB-2886 k50_24408 904 "chr21:35153641-35181264,chr8:93095983-93098767" "7-523,524-903" "-,-" 363 373 translocation chr21:35153641|chr8:93098767 RUNX1(+)RUNX1T1(+) In-frame QVATYHRAIKITVDGPREPR|NRTEKHSTMPDSPVDVKTQS gene_fusion TCGA-AB-2886 k44_589058 752 "chr8:93092231-93098767,chr21:35153641-35153747" "1-645,646-752" "+,+" 337 372 translocation chr21:35153641|chr8:93098767 RUNX1(-)RUNX1T1(-) In-frame QVATYHRAIKITVDGPREPR|NRTEKHSTMPDSPVDVKTQS gene_fusion TCGA-AB-2886 k38_205641 139 "chr8:93098731-93098835,chr21:35153641-35153674" "35-139,1-34" "-,-" 354 5 translocation chr21:35153641|chr8:93098835 RUNX1(+)RUNX1T1(+) In-frame??? ATRNILFYSLSTSVFQVGFI|SRFSGPIHCDF gene_fusion TCGA-AB-2886 k34_2553384 5438 "chr8:93136477-93140273,chr21:35140029-35141669" "1-3798,3798-5438" "+,+" 10 18 translocation chr21:35140029|chr8:93140273 RUNX1(-)RUNX1T1(-) gene_fusion TCGA-AB-2886 k30_3655710 6434 "chr8:93136397-93140273,chr21:35140029-35142589" "2558-6434,1-2558" "-,-" 10 18 translocation chr21:35140029|chr8:93140273 RUNX1(+)RUNX1T1(+) gene_fusion TCGA-AB-2886 k32_3077022 5529 "chr8:93136396-93140273,chr21:35140029-35141682" "1651-5529,1-1651" "-,-" 10 18 translocation chr21:35140029|chr8:93140273 RUNX1(+)RUNX1T1(+) gene_fusion TCGA-AB-2872 k38_2354354 551 "chr17:35758092-35759703,chr15:72112549-72112808" "259-551,1-260" "+,+" 17 14 translocation chr15:72112808|chr17:35758092 PML(+)RARA(+) In-frame IGSEVFLPNSNHVASGAGEA|AIETQSSSSEEIVPSPPSPP gene_fusion TCGA-AB-2872 k42_1340598 1143 "chr17:35758092-35765895,chr15:72112768-72112808" "40-1143,1-41" "+,+" 17 12 translocation chr15:72112808|chr17:35758092 PML(+)RARA(+) In-frame PNSNHVASGAGEA|AIETQSSSSEEIVPSPPSPP gene_fusion TCGA-AB-3012 k36_1727789 2109 "chr17:35758093-35766512,chr15:72104287-72112749" "390-2109,1-379" "+,+" 47 26 translocation chr15:72112749|chr17:35758093 PML(+)RARA(+) In-frame VSPPHLDGPPSPRSPVMGEN|AIETQSSSSEEIVPSPPSPP gene_fusion TCGA-AB-3012 k40_1052996 3362 "chr15:72074108-72112749,chr17:35758093-35766447" "1-1697,1708-3362" "+,+" 47 26 translocation chr15:72112749|chr17:35758093 PML(+)RARA(+) In-frame VSPPHLDGPPSPRSPVMGEN|AIETQSSSSEEIVPSPPSPP gene_fusion TCGA-AB-3012 k38_1364677 2110 "chr17:35758093-35766511,chr15:72104285-72112749" "392-2110,1-381" "+,+" 47 26 translocation chr15:72112749|chr17:35758093 PML(+)RARA(+) In-frame VSPPHLDGPPSPRSPVMGEN|AIETQSSSSEEIVPSPPSPP gene_fusion TCGA-AB-3012 k32_2595024 2228 "chr17:35758093-35766635,chr15:72104291-72112749" "386-2228,1-375" "+,+" 47 26 translocation chr15:72112749|chr17:35758093 PML(+)RARA(+) In-frame VSPPHLDGPPSPRSPVMGEN|AIETQSSSSEEIVPSPPSPP gene_fusion TCGA-AB-3012 k30_3110991 569 "chr17:35752130-35752645,chr15:72113872-72113924" "54-569,1-53" "-,-" 7 8 translocation chr15:72113872|chr17:35752645 PML(-)RARA(-) gene_fusion TCGA-AB-3012 k30_3149526 662 "chr17:35728158-35741174,chr15:72113872-72113924" "1-609,610-662" "+,+" 5 6 translocation chr15:72113872|chr17:35741174 PML(+)RARA(+) gene_fusion TCGA-AB-2858 k46_57158 2512 "chr8:93040906-93098767,chr21:35153641-35153685" "1-2467,2468-2512" "+,+" 198 139 translocation chr21:35153641|chr8:93098767 RUNX1(-)RUNX1T1(-) In-frame RAIKITVDGPREPR|NRTEKHSTMPDSPVDVKTQS gene_fusion TCGA-AB-2858 k48_163752 3092 "chr8:93040946-93098767,chr21:35153641-35181412" "666-3092,1-665" "-,-" 219 141 translocation chr21:35153641|chr8:93098767 RUNX1(+)RUNX1T1(+) In-frame QVATYHRAIKITVDGPREPR|NRTEKHSTMPDSPVDVKTQS gene_fusion TCGA-AB-2858 k44_544550 534 "chr1:152191162-152191738,chr1:152211183-152211403" "1-319,314-534" "-,-" 44 31 duplication chr1:152191162|chr1:152211403 CRTC2(+)CREB3L4(-) gene_fusion TCGA-AB-2858 k42_818004 276 "chr8:93143950-93144113,chr21:35153640-35153747" "108-271,1-108" "-,-" 8 13 translocation chr21:35153640|chr8:93144113 RUNX1(+)RUNX1T1(+) In-frame EGHQRGWGGIAGGRVLGACA|SRFSGPIHCDFDGSVVGGDL gene_fusion TCGA-AB-2847 k38_1816851 933 "chr19:18430107-18493872,chr19:18304499-18304648" "1-784,784-933" "+,+" 14 12 duplication chr19:18304499|chr19:18493872 NA(NA)ELL(-) Out-of-frame??? TPGYFFVFSVETGFCHVGQA|RKMAALKEDRSYGLSCGRVS lsr TCGA-AB-3011 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2848 k26_5034878 2291 "chr12:123827326-123829087,chr12:123534094-123545868" "1-1764,1762-2291" "+,+" 38 20 duplication chr12:123534094|chr12:123829087 NCOR2(-)SCARB1(-) gene_fusion TCGA-AB-2848 k46_298042 1178 "chr12:123828385-123829087,chr12:123534094-123545816" "1-703,701-1178" "+,+" 38 20 duplication chr12:123534094|chr12:123829087 NCOR2(-)SCARB1(-) gene_fusion TCGA-AB-2848 k34_2597717 1750 "chr12:123828102-123829087,chr12:123534094-123617997" "1-986,984-1750" "+,+" 38 20 duplication chr12:123534094|chr12:123829087 NCOR2(-)SCARB1(-) gene_fusion TCGA-AB-2848 k28_4307360 2318 "chr12:123827347-123829087,chr12:123534094-123586112" "1-1743,1741-2318" "+,+" 38 20 duplication chr12:123534094|chr12:123829087 NCOR2(-)SCARB1(-) gene_fusion TCGA-AB-2866 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2846 k42_756379 123 "chr16:15722326-15722411,chr16:65673674-65673714" "1-86,83-123" "+,-" 17 25 inversion chr16:15722411|chr16:65673714 MYH11(-)CBFB(-) In-frame SSSPPSGSPGPAWTSPAHGP|PFPPDETCLYLQ gene_fusion TCGA-AB-2846 k36_2059208 455 "chr16:15722405-15722746,chr16:65674511-65674622" "114-455,1-112" "-,+" 26 7 inversion chr16:15722746|chr16:65674622 MYH11(+)CBFB(+) gene_fusion TCGA-AB-2836 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2844 k32_3055984 2050 "chr11:117850102-117860901,chr19:18430014-18444694" "735-2050,1-737" "-,+" 28 9 translocation chr11:117860901|chr19:18444694 MLL(-)ELL(-) In-frame SVPITPRVVCFLCASSGHVE|DSVSLRPSIRFQGSQGHISI gene_fusion TCGA-AB-2844 k32_3055983 1936 "chr11:117850102-117860240,chr19:18430014-18444699" "735-1936,1-741" "-,+" 18 9 translocation chr11:117860240|chr19:18444699 MLL(-)ELL(-) In-frame NSSKQKIPADGVHRIRVDFK|DSVSLRPSIRFQGSQGHISI gene_fusion TCGA-AB-2830 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2862 k38_1497748 1957 "chr17:35758092-35766490,chr15:72112549-72112808" "1-1699,1698-1957" "-,-" 61 42 translocation chr15:72112808|chr17:35758092 PML(-)RARA(-) In-frame IGSEVFLPNSNHVASGAGEA|AIETQSSSSEEIVPSPPSPP gene_fusion TCGA-AB-3002 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2817 k40_1077547 2749 "chr9:132719269-132745365,chr22:21853112-21854426" "1-1437,1435-2749" "-,-" 46 39 translocation chr22:21854426|chr9:132719269 BCR(-)ABL1(-) In-frame VRKTGQIWPNDGEGAFHGDA|EALQRPVASDFEPQGLSEAA gene_fusion TCGA-AB-2817 k42_741427 6229 "chr9:132719269-132752849,chr22:21853470-21854426" "955-6229,1-957" "+,+" 47 39 translocation chr22:21854426|chr9:132719269 BCR(+)ABL1(+) In-frame VRKTGQIWPNDGEGAFHGDA|EALQRPVASDFEPQGLSEAA gene_fusion TCGA-AB-2817 k32_2843244 2135 "chr22:21853038-21854426,chr9:132719269-132728244" "745-2135,1-747" "-,-" 46 39 translocation chr22:21854426|chr9:132719269 BCR(-)ABL1(-) In-frame VRKTGQIWPNDGEGAFHGDA|EALQRPVASDFEPQGLSEAA gene_fusion TCGA-AB-2865 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2810 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2838 k36_1735156 1636 "chr17:20859657-20886921,chr16:65432610-65433228" "1-1019,1018-1636" "-,-" 49 39 translocation chr16:65433228|chr17:20859657 AF086125(+)USP22(+) Out-of-frame QQDAHEFLIAALDVLHRHCK|DEKSKAQERMSDGLEDAQ*V gene_fusion TCGA-AB-2838 k30_3200498 960 "chr16:65432417-65433228,chr17:20859657-20859806" "149-960,1-150" "-,-" 48 37 translocation chr16:65433228|chr17:20859657 AF086125(+)USP22(+) Out-of-frame QQDAHEFLIAALDVLHRHCK|DEKSKAQERMSDGLEDAQ*V gene_fusion TCGA-AB-2838 k34_688362 1668 "chr17:20858477-20859686,chr16:65441810-65442266" "1-1210,1211-1668" "-,-" 40 38 translocation chr16:65442266|chr17:20858477 CA7(-)USP22(+) Out-of-frame gene_fusion TCGA-AB-2838 k38_1353667 2634 "chr17:20858477-20886921,chr16:65441833-65442266" "436-2634,1-435" "+,+" 40 35 translocation chr16:65442266|chr17:20858477 CA7(+)USP22(-) ? gene_fusion TCGA-AB-2838 k30_3150786 1771 "chr17:20858477-20859806,chr16:65441826-65442266" "1-1330,1331-1771" "-,-" 40 38 translocation chr16:65442266|chr17:20858477 CA7(-)USP22(+) ? gene_fusion TCGA-AB-2838 k46_78954 990 "chr17:21316734-21317687,chr17:20859656-20859700" "37-990,1-45" "+,-" 41 25 inversion chr17:20859656|chr17:21316734 USP22(-)NA(NA) ? lsr TCGA-AB-2838 k40_1012972 1960 "chr17:20859656-20886921,chr17:21316734-21317682" "1-1020,1012-1960" "-,+" 45 26 inversion chr17:20859656|chr17:21316734 USP22(+)NA(NA) ? lsr TCGA-AB-2838 k44_460318 1863 "chr17:21316734-21317685,chr17:20859656-20886821" "912-1863,1-920" "+,-" 45 26 inversion chr17:20859656|chr17:21316734 USP22(-)NA(NA) ? lsr TCGA-AB-2838 k42_711484 1950 "chr17:20859656-20886910,chr17:21316734-21317683" "1-1009,1001-1950" "-,+" 45 26 inversion chr17:20859656|chr17:21316734 USP22(+)NA(NA) ? lsr TCGA-AB-2838 k36_1708140 1247 "chr11:89919569-89920646,chr11:125642653-125642818" "5-1083,1082-1247" "-,+" 13 18 inversion chr11:89919569|chr11:125642653 NA(NA)SRPR(-) ? lsr TCGA-AB-2838 k26_4403760 627 "chr11:89919569-90230348,chr11:125642653-125642818" "1-463,462-627" "-,+" 13 18 inversion chr11:89919569|chr11:125642653 NA(NA)SRPR(-) ? lsr TCGA-AB-2838 k26_4433631 967 "chr11:125640373-125640950,chr11:89863714-89864103" "1-578,578-967" "+,-" 10 7 inversion chr11:89864103|chr11:125640950 NA(NA)SRPR(+) ? lsr TCGA-AB-2868 k36_1807492 2230 "chr5:55591804-55593825,chr5:39089201-39089408" "209-2230,1-208" "-,-" 15 35 duplication chr5:39089201|chr5:55593825 RICTOR(+)NA(NA) ? lsr TCGA-AB-2868 k44_181044 318 "chr5:55593622-55593825,chr5:39089201-39089314" "115-318,1-114" "-,-" 15 32 duplication chr5:39089201|chr5:55593825 RICTOR(+)NA(NA) ? lsr TCGA-AB-2868 k40_1075801 2180 "chr5:55591760-55593825,chr5:39089201-39089314" "115-2180,1-114" "-,-" 15 34 duplication chr5:39089201|chr5:55593825 RICTOR(+)NA(NA) ? lsr TCGA-AB-2868 k38_1402690 2226 "chr5:55591802-55593825,chr5:39089201-39089402" "203-2226,1-202" "-,-" 15 31 duplication chr5:39089201|chr5:55593825 RICTOR(+)NA(NA) ? lsr TCGA-AB-2868 k44_376091 130 "chr4:170721331-170721418,chr4:170793772-170793814" "43-130,1-43" "+,+" 12 18 duplication chr4:170721331|chr4:170793814 NEK1(-)CLCN3(+) ? gene_fusion TCGA-AB-2868 k42_227712 175 "chr4:170721331-170721453,chr4:170793774-170793814" "41-163,1-41" "+,+" 12 15 duplication chr4:170721331|chr4:170793814 NEK1(-)CLCN3(+) No matches found gene_fusion TCGA-AB-2868 k30_3311592 1581 "chr9:120034067-120035376,chr9:126485882-126486146" "272-1581,7-271" "-,+" 4 17 inversion chr9:120035376|chr9:126486146 NA(NA)NR6A1(-) ? lsr TCGA-AB-2868 k34_982350 513 "chr9:120370202-120370540,chr9:120033301-120033474" "175-513,1-174" "+,-" 9 14 inversion chr9:120033301|chr9:120370202 NA(NA)NA(NA) ? lsr TCGA-AB-2868 k36_1171420 868 "chr9:127064251-127065455,chr9:113366473-113366528" "46-868,1-56" "-,+" 12 13 inversion chr9:113366528|chr9:127065455 ZNF483(-)GAPVD1(+) ? gene_fusion TCGA-AB-2868 k36_1834241 772 "chr9:126486143-126486749,chr9:139298220-139298381" "166-772,1-162" "+,-" 8 13 inversion chr9:126486143|chr9:139298220 NR6A1(-)NA(NA) ? lsr TCGA-AB-2868 k26_4685563 1173 "chr5:39299821-39300595,chr17:7697804-7698203" "399-1173,1-400" "-,+" 16 12 translocation chr17:7698203|chr5:39300595 JMJD3(-)NA(NA) ? lsr TCGA-AB-2868 k34_2257604 2907 "chr5:39298016-39300595,chr17:7697875-7698203" "328-2907,1-329" "-,+" 16 13 translocation chr17:7698203|chr5:39300595 JMJD3(-)NA(NA) ? lsr TCGA-AB-2868 k28_3909954 3253 "chr5:39297741-39300595,chr17:7697804-7698203" "1-2855,2854-3253" "+,-" 16 11 translocation chr17:7698203|chr5:39300595 JMJD3(+)NA(NA) ? lsr TCGA-AB-2868 k28_3986172 571 "chr9:126460529-126460844,chr9:135070488-135071625" "256-571,1-259" "-,+" 10 8 inversion chr9:126460844|chr9:135071625 NR6A1(+)OBP2B(-) ? gene_fusion TCGA-AB-2868 k26_4696631 564 "chr5:39288481-39288834,chr5:159467932-159468143" "211-564,1-212" "+,-" 4 7 inversion chr5:39288481|chr5:159467932 NA(NA)PWWP2A(+) ? lsr TCGA-AB-2868 k26_4676840 973 "chr5:39288481-39289241,chr5:159467932-159468143" "211-973,1-212" "+,-" 4 7 inversion chr5:39288481|chr5:159467932 NA(NA)PWWP2A(+) ? lsr TCGA-AB-2868 k28_3971462 3617 "chr9:120420615-120424022,chr9:135072100-135072308" "210-3617,1-209" "-,+" 7 5 inversion chr9:120424022|chr9:135072308 NA(NA)OBP2B(-) ? lsr TCGA-AB-2837 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2860 k28_4055593 457 "chr21:44258998-44259303,chr21:16060181-16060331" "152-457,1-151" "-,+" 5 7 inversion chr21:16060331|chr21:44259303 USP25(-)TRAPPC10(+) ? gene_fusion TCGA-AB-2860 k40_970777 655 "chr21:44260359-44260711,chr21:16024550-16060334" "1-353,351-655" "+,-" 61 26 inversion chr21:16060334|chr21:44260711 USP25(+)TRAPPC10(-) ? gene_fusion TCGA-AB-2860 k34_2248551 680 "chr21:44260183-44260711,chr21:16060181-16060334" "1-529,527-680" "+,-" 61 26 inversion chr21:16060334|chr21:44260711 USP25(+)TRAPPC10(-) ? gene_fusion TCGA-AB-2860 k32_2781495 2221 "chr21:16057079-16062137,chr21:44262122-44262312" "1-2031,2031-2221" "+,-" 85 21 inversion chr21:16062137|chr21:44262312 USP25(+)TRAPPC10(-) ? gene_fusion TCGA-AB-2860 k34_2228972 3038 "chr21:16060181-16062137,chr21:44261231-44262312" "1-1957,1957-3038" "+,-" 84 22 inversion chr21:16062137|chr21:44262312 USP25(+)TRAPPC10(-) ? gene_fusion TCGA-AB-2860 k36_1759407 2903 "chr21:16060320-16062137,chr21:44261227-44262312" "1-1818,1818-2903" "+,-" 84 23 inversion chr21:16062137|chr21:44262312 USP25(+)TRAPPC10(-) ? gene_fusion TCGA-AB-2860 k38_1339150 986 "chr21:44242019-44242853,chr21:16060181-16060332" "152-986,1-152" "-,+" 14 19 inversion chr21:16060332|chr21:44242853 USP25(-)NA(NA) ? lsr TCGA-AB-2860 k40_969737 1129 "chr21:44242027-44242853,chr21:16024550-16060332" "1-827,827-1129" "+,-" 14 25 inversion chr21:16060332|chr21:44242853 USP25(+)NA(NA) ? lsr TCGA-AB-3005 k26_3023633 1679 "chr11:117849404-117856166,chr10:22042705-22056863" "1-1318,1314-1679" "+,+" 9 14 translocation chr10:22042705|chr11:117856166 MLLT10(+)MLL(+) In-frame KCQNLQWMPSKAYLQKQAKG|IYNSNDVAVSFPNVVSGSGS gene_fusion TCGA-AB-3005 k32_1812091 4022 "chr10:22042705-22072562,chr11:117849849-117856166" "1-3154,3150-4022" "-,-" 9 14 translocation chr10:22042705|chr11:117856166 MLLT10(-)MLL(-) In-frame KCQNLQWMPSKAYLQKQAKG|IYNSNDVAVSFPNVVSGSGS gene_fusion TCGA-AB-2824 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2843 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2855 k44_574642 1447 "chr10:21980606-22042739,chr11:85363399-85370680" "413-1447,1-414" "+,-" 35 47 translocation chr10:21980606|chr11:85363399 PICALM(+)MLLT10(+) In-frame IYSQPVMRPPNPFGPVSGAQ|KYKEKDKHKQKHKKQPEPSP gene_fusion TCGA-AB-2855 k42_186129 457 "chr10:21980606-21999704,chr11:85363399-85363438" "39-457,1-40" "+,-" 31 38 translocation chr10:21980606|chr11:85363399 PICALM(+)MLLT10(+) In-frame RPPNPFGPVSGAQ|KYKEKDKHKQKHKKQPEPSP gene_fusion TCGA-AB-2855 k38_1657544 644 "chr13:113576206-113577426,chr13:113599002-113599236" "234-644,1-235" "+,+" 6 12 duplication chr13:113576206|chr13:113599236 GAS6(+)FAM70B(-) Out-of-frame GRPLRCPAVGSHRDCSNHTQ|ALQPLPSCALLCPGFV*GPA gene_fusion TCGA-AB-2855 k32_3152958 784 "chr13:113598829-113599236,chr13:113576206-113576583" "1-408,407-784" "+,+" 6 12 duplication chr13:113576206|chr13:113599236 GAS6(+)FAM70B(-) ? gene_fusion TCGA-AB-2855 k26_4985089 2234 "chr11:85346278-85347751,chr10:21863395-21946142" "761-2234,1-760" "-,+" 4 8 translocation chr10:21946142|chr11:85347751 MLLT10(-)PICALM(-) In-frame QSLSDSSSHSQDKHHEKEKK|IQFM*LDGRKWNYSKKTSAQ gene_fusion TCGA-AB-2832 k44_307739 100 "chr11:111136304-111136362,chr11:116448795-116448837" "42-100,1-43" "+,-" 16 21 inversion chr11:111136304|chr11:116448795 PPP2R1B(-)KIAA0999(+) Out-of-frame LYWPQSLSIILQNT|RSHYVAQAGLELLSSSNP gene_fusion TCGA-AB-2832 k40_850608 3219 "chr11:111116338-111131406,chr10:21863343-21980704" "899-3219,1-909" "-,+" 23 17 translocation chr10:21980704|chr11:111131406 MLLT10(-)PPP2R1B(-) In-frame KKQPEPSPALVPSLTVTTEK|DSVRLLAVEACVSIAQLLSQ gene_fusion TCGA-AB-2832 k38_1125131 2763 "chr11:111116334-111131406,chr10:21924318-21980704" "1-2325,2315-2763" "+,-" 23 17 translocation chr10:21980704|chr11:111131406 MLLT10(+)PPP2R1B(+) In-frame KKQPEPSPALVPSLTVTTEK|DSVRLLAVEACVSIAQLLSQ gene_fusion TCGA-AB-2832 k26_3581656 382 "chr11:111258300-111258532,chr11:116474069-116474219" "1-233,232-382" "-,+" 8 16 inversion chr11:111258300|chr11:116474069 KIAA0999(-)C11orf1(-) In-frame IGKGNFAVVKRATHLVTKAK|RQNLACFLTNPHCGSLVNAD gene_fusion TCGA-AB-2832 k36_1438492 709 "chr11:111258300-111260016,chr11:116474069-116474167" "98-709,1-99" "+,-" 8 16 inversion chr11:111258300|chr11:116474069 KIAA0999(+)C11orf1(+) In-frame IGKGNFAVVKRATHLVTKAK|RQNLACFLTNPHCGSLVNAD gene_fusion TCGA-AB-2832 k28_3061097 4612 "chr11:117844700-117860239,chr10:21999382-22002854" "827-4612,1-828" "-,-" 6 11 translocation chr10:21999382|chr11:117860239 MLL(-)MLLT10(-) In-frame NSSKQKIPADGVHRIRVDFK|TYTSTSNNSISGSLKRLEDT gene_fusion TCGA-AB-2832 k34_1788151 4660 "chr11:117844730-117860239,chr10:21999382-22011192" "905-4660,1-906" "-,-" 6 11 translocation chr10:21999382|chr11:117860239 MLL(-)MLLT10(-) In-frame NSSKQKIPADGVHRIRVDFK|TYTSTSNNSISGSLKRLEDT gene_fusion TCGA-AB-2857 k30_3409989 567 "chr19:935335-936977,chr11:118469955-118470183" "1-342,339-567" "+,-" 17 7 translocation chr11:118470183|chr19:936977 WDR18(-)H2AFX(-) In-frame ITQWSLRPGRSCRKHPPVGG|LRWGRDEALGNRHIFLPSDC gene_fusion TCGA-AB-2857 k30_3415445 485 "chr16:666971-667521,chr19:13509705-13509865" "1-325,325-485" "-,-" 12 7 translocation chr16:666971|chr19:13509865 RHBDL1(-)NA(NA) lsr TCGA-AB-2857 k34_1419411 254 "chr16:666672-666897,chr19:13509837-13509865" "1-226,226-254" "-,-" 13 4 translocation chr16:666672|chr19:13509865 RHBDL1(-)NA(NA) lsr TCGA-AB-2857 k26_4746248 924 "chr1:112100158-112104994,chr1:119229474-119229664" "189-924,1-191" "-,+" 4 3 inversion chr1:112104994|chr1:119229664 DDX20(+)TBX15(-) In-frame KYMRDPTFVRLNSSDPSLIG|GSTGTSPTTSSTGTPSPSAS gene_fusion TCGA-AB-2857 k28_77480 1228 "chr11:118488246-118492254, chr19:42352580 -42352628" "1 -1182,1180 -1228" translocation chr11:118492254|chr19:42352580 ZNF585B(-)C2CD2L(+) In-frame RNPQPWLQRIMAAPMR|DLGPQSRELTLKVLRSSSCG gene_fusion TCGA-AB-2861 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2835 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2851 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-3008 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2859 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2813 k26_4692363 675 "chr5:60584022-60584473,chr5:65475899-65476121" "224-675,1-223" "-,+" 4 11 inversion chr5:60584473|chr5:65476121 NA(NA)SFRS12(+) lsr TCGA-AB-3009 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-3001 k42_817925 2496 "chr15:72074115-72102802,chr17:35752530-35765900" "1222-2496,1-1223" "-,-" 49 30 translocation chr15:72102802|chr17:35752530 PML(-)RARA(-) In-frame GFDEFKVRLQDLSSCITQGK|VVDFYNQNRACLLPEKGLPA gene_fusion TCGA-AB-3001 k28_3900694 687 "chr17:35728151-35741174,chr15:72104251-72104321" "1-616,617-687" "+,+" 6 13 translocation chr15:72104251|chr17:35741174 PML(+)RARA(+) gene_fusion TCGA-AB-3001 k38_1504489 1904 "chr15:72074115-72102802,chr17:35758092-35762285" "630-1904,1-631" "-,-" 25 9 translocation chr15:72102802|chr17:35758092 PML(-)RARA(-) gene_fusion TCGA-AB-2856 k26_3400621 3399 "chr5:176495547-176571802,chr11:3702909-3713132" "1-2960,2959-3399" "+,-" 25 23 translocation chr11:3713132|chr5:176571802 NSD1(-)NUP98(-) In-frame DMEKEPGIPSLTPQAELPEP|ALTDPNASAAQQAVLQQHIN gene_fusion TCGA-AB-2856 k30_2493736 4417 "chr5:176494693-176571802,chr11:3690370-3713132" "1335-4408,1-1336" "-,+" 25 23 translocation chr11:3713132|chr5:176571802 NSD1(+)NUP98(+) In-frame DMEKEPGIPSLTPQAELPEP|ALTDPNASAAQQAVLQQHIN gene_fusion TCGA-AB-3007 k46_357504 1167 "chr17:35758092-35765915,chr15:72102758-72102802" "1-1124,1123-1167" "-,-" 52 43 translocation chr15:72102802|chr17:35758092 PML(-)RARA(-) gene_fusion TCGA-AB-3007 k38_1816837 1755 "chr15:72074264-72102802,chr17:35758092-35762285" "630-1755,1-631" "-,-" 52 47 translocation chr15:72102802|chr17:35758092 PML(-)RARA(-) gene_fusion TCGA-AB-3007 k26_5426848 731 "chr17:35728107-35741174,chr15:72104251-72104321" "1-660,661-731" "+,+" 9 20 translocation chr15:72104251|chr17:35741174 PML(+)RARA(+) gene_fusion TCGA-AB-3007 k28_4208239 240 "chr9:126976404-126976550,chr9:90174943-90175035" "1-147,148-240" "+,+" 4 4 duplication chr9:90174943|chr9:126976550 NA(NA)PPP6C(-) lsr TCGA-AB-3007 k28_4637974 518 "chr19:48864041-48864441,chr19:50420274-50420392" "1-401,401-518" "-,+" 7 3 inversion chr19:48864041|chr19:50420274 PLAUR(+)EXOC3L2(-) gene_fusion TCGA-AB-2823 k32_3079875 1297 "chr15:72074243-72102802,chr17:35758092-35758243" "151-1297,1-152" "-,-" 28 54 translocation chr15:72102802|chr17:35758092 PML(-)RARA(-) gene_fusion TCGA-AB-2823 k42_885232 2225 "chr15:72074263-72102802,chr17:35758092-35765891" "1099-2225,1-1100" "-,-" 28 50 translocation chr15:72102802|chr17:35758092 PML(-)RARA(-) gene_fusion TCGA-AB-2823 k32_3074580 805 "chr17:35728033-35741174,chr15:72104251-72104321" "72-805,1-71" "-,-" 29 33 translocation chr15:72104251|chr17:35741174 PML(-)RARA(-) gene_fusion TCGA-AB-2940 k30_812238 527 "chr1:178549057-178549515,chr1:178765691-178765764" "69-527,1-74" "+,+" 6 6 duplication chr1:178549057|chr1:178765764 ACBD6(-)NA(NA) lsr TCGA-AB-2938 k40_1183316 1533 "chr19:4004961-4006247,chr17:7226876-7227132" "1-1288,1277-1533" "-,+" 250 204 translocation chr17:7226876|chr19:4004961 TNK1(-)ZBTB7A(-) Out-of-frame gene_fusion TCGA-AB-2938 k40_1188657 814 "chr17:7328407-7328900,chr19:8060942-8062475" "321-814,1-321" "-,+" 18 37 translocation chr17:7328900|chr19:8062475 POLR2A(-)FBN3(-) gene_fusion TCGA-AB-2938 k28_4597634 2715 "chr1:219381400-219383212,chr1:241372775-241373676" "1-1813,1814-2715" "+,+" 5 11 deletion chr1:219383212|chr1:241372775 NA(NA)CEP170(-) lsr TCGA-AB-2938 k26_5447628 2752 "chr1:219381402-219383212,chr1:241372775-241373715" "942-2752,1-941" "-,-" 5 11 deletion chr1:219383212|chr1:241372775 NA(NA)CEP170(+) lsr TCGA-AB-2938 k28_4615199 725 "chr1:238606527-238607176,chr1:222497925-222498001" "1-650,649-725" "+,+" 4 6 duplication chr1:222497925|chr1:238607176 NVL(-)FMN2(+) Out-of-frame gene_fusion TCGA-AB-3000 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2954 k44_543848 941 "chr16:65620779-65673714,chr16:15721034-15722411" "412-941,1-415" "-,+" 39 25 inversion chr16:15722411|chr16:65673714 MYH11(+)CBFB(+) gene_fusion TCGA-AB-2954 k42_732111 620 "chr16:65620771-65673714,chr16:15722326-15722411" "1-538,535-620" "+,-" 39 25 inversion chr16:15722411|chr16:65673714 MYH11(-)CBFB(-) gene_fusion TCGA-AB-2954 k32_3172927 3163 "chr16:65680517-65683092,chr16:15721508-15722612" "588-3163,1-579" "-,+" 10 7 inversion chr16:15722612|chr16:65683092 MYH11(+)CBFB(+) gene_fusion TCGA-AB-2954 k28_4408585 4020 "chr16:65679373-65683092,chr16:15722321-15722612" "1-3720,3729-4020" "+,-" 10 7 inversion chr16:15722612|chr16:65683092 MYH11(-)CBFB(-) gene_fusion TCGA-AB-2954 k36_2117930 1108 "chr16:15720942-15722612,chr16:65682701-65683092" "1-708,717-1108" "+,-" 10 7 inversion chr16:15722612|chr16:65683092 MYH11(-)CBFB(-) gene_fusion TCGA-AB-3006 k36_1565882 194 "chr13:94801810-94801969,chr13:94751496-94751530" "1-160,160-194" "+,+" 9 4 duplication chr13:94751496|chr13:94801969 ABCC4(-)NA(NA) lsr TCGA-AB-2899 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2825 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2948 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2941 k34_2757940 3637 "chr22:21853484-21962600,chr9:132719272-132740260" "1-2446,2447-3637" "+,+" 50 78 translocation chr22:21962600|chr9:132719272 BCR(+)ABL1(+) gene_fusion TCGA-AB-2941 k34_2837014 5430 "chr9:132719272-132752930,chr22:21962524-21962600" "1-5353,5354-5430" "-,-" 50 70 translocation chr22:21962600|chr9:132719272 BCR(-)ABL1(-) gene_fusion TCGA-AB-2941 k40_1316280 7649 "chr9:132719272-132752883,chr22:21853587-21962600" "2344-7649,1-2343" "+,+" 50 77 translocation chr22:21962600|chr9:132719272 BCR(+)ABL1(+) gene_fusion TCGA-AB-2941 k28_4820512 3506 "chr22:21964727-21989076,chr9:132578559-132579663" "1-2402,2402-3506" "-,-" 12 19 translocation chr22:21964727|chr9:132579663 BCR(-)ABL1(-) gene_fusion TCGA-AB-2941 k30_4129951 1593 "chr9:132578559-132579663,chr22:21964727-21983971" "489-1593,1-489" "-,-" 12 19 translocation chr22:21964727|chr9:132579663 BCR(-)ABL1(-) gene_fusion TCGA-AB-2941 k32_3434972 2981 "chr22:21964727-21988551,chr9:132578559-132579663" "1105-2981,1-1105" "+,+" 12 19 translocation chr22:21964727|chr9:132579663 BCR(+)ABL1(+) gene_fusion TCGA-AB-2941 k36_1124171 1769 "chr9:132645577-132647312,chr22:21962567-21962601" "35-1769,1-35" "+,+" 12 14 translocation chr22:21962601|chr9:132645577 BCR(+)ABL1(+) gene_fusion TCGA-AB-2941 k40_1327097 4071 "chr22:21853587-21962601,chr9:132645577-132647304" "1728-4071,1-1728" "-,-" 12 22 translocation chr22:21962601|chr9:132645577 BCR(-)ABL1(-) gene_fusion TCGA-AB-2941 k40_1336902 2760 "chr19:11200616-11219799,chr19:13723421-13730824" "602-2760,1-602" "+,-" 9 12 inversion chr19:11200616|chr19:13723421 DOCK6(-)CCDC130(+) Out-of-frame gene_fusion TCGA-AB-2935 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2931 k34_2366339 2367 "chr2:32485071-32494737,chr2:33025848-33099777" "912-2367,1-911" "+,+" 7 15 duplication chr2:32485071|chr2:33099777 LTBP1(+)BIRC6(+) In-frame QMTLTLKPKPSVGLPQQIHS|HDDLLEDSDSEEHSRSDSVT gene_fusion TCGA-AB-2910 k42_642817 5406 "chr16:3721901-3841012,chr8:41913931-41917927" "724-5406,1-724" "-,-" 6 17 translocation chr16:3841012|chr8:41913931 CREBBP(+)MYST3(+) gene_fusion TCGA-AB-2910 k38_1178419 8299 "chr16:3726037-3841012,chr8:41913931-42025955" "3655-8299,1-3655" "-,-" 6 17 translocation chr16:3841012|chr8:41913931 CREBBP(+)MYST3(+) gene_fusion TCGA-AB-2910 k44_434504 6082 "chr16:3719257-3841012,chr8:41913931-41917774" "375-6082,1-375" "-,-" 6 17 translocation chr16:3841012|chr8:41913931 CREBBP(+)MYST3(+) gene_fusion TCGA-AB-2910 k32_2300932 5706 "chr8:41913931-42025978,chr16:3768013-3841012" "1-3678,3678-5706" "-,-" 5 17 translocation chr16:3841012|chr8:41913931 CREBBP(+)MYST3(+) gene_fusion TCGA-AB-2910 k40_892071 8299 "chr16:3726037-3841012,chr8:41913931-42025955" "3655-8299,1-3655" "-,-" 6 17 translocation chr16:3841012|chr8:41913931 CREBBP(+)MYST3(+) gene_fusion TCGA-AB-2910 k34_1874873 1796 "chr8:41909872-41911544,chr16:3869834-3869958" "1-1673,1672-1796" "+,+" 12 16 translocation chr16:3869834|chr8:41911544 CREBBP(-)MYST3(-) gene_fusion TCGA-AB-2910 k26_3901916 2785 "chr8:41908903-41911544,chr16:3869834-3869978" "1-2642,2641-2785" "+,+" 12 15 translocation chr16:3869834|chr8:41911544 CREBBP(-)MYST3(-) gene_fusion TCGA-AB-2910 k32_2300332 3351 "chr8:41908317-41911544,chr16:3869834-3869958" "1-3228,3227-3351" "+,+" 12 14 translocation chr16:3869834|chr8:41911544 CREBBP(-)MYST3(-) gene_fusion TCGA-AB-2927 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2932 k46_273294 4248 "chr7:151535318-151686694,chr7:152134535-152135104" "1-3681,3679-4248" "-,-" 13 65 duplication chr7:151535318|chr7:152135104 MLL3(+)ACTR3B(-) gene_fusion TCGA-AB-2932 k26_4349158 1064 "chr7:152134169-152135104,chr7:151535318-151535448" "129-1064,1-131" "-,-" 12 62 duplication chr7:151535318|chr7:152135104 MLL3(+)ACTR3B(-) gene_fusion TCGA-AB-2932 k38_1356568 991 "chr7:152134456-152135104,chr7:151535318-151548756" "343-991,1-345" "-,-" 13 65 duplication chr7:151535318|chr7:152135104 MLL3(+)ACTR3B(-) gene_fusion TCGA-AB-2932 k44_468114 4335 "chr7:151535318-151763731,chr7:152134535-152135104" "1-3768,3766-4335" "-,-" 13 60 duplication chr7:151535318|chr7:152135104 MLL3(+)ACTR3B(-) gene_fusion TCGA-AB-2908 k26_4532887 432 "chr21:33712496-33712743,chr21:33821658-33821842" "185-432,1-185" "-,+" 18 35 inversion chr21:33712743|chr21:33821842 IFNGR2(-)GART(-) gene_fusion TCGA-AB-2908 k36_1349213 459 "chr21:33712450-33712743,chr21:33821677-33821842" "1-294,294-459" "+,-" 18 35 inversion chr21:33712743|chr21:33821842 IFNGR2(+)GART(+) gene_fusion TCGA-AB-2908 k38_1318920 1562 "chr21:33822851-33823676,chr21:36279180-36279829" "89-913,913-1562" "+,+" 13 19 deletion chr21:33823676|chr21:36279180 GART(-)NA(NA) lsr TCGA-AB-2908 k36_1681921 1569 "chr21:33822851-33823676,chr21:36279180-36279852" "673-1497,1-673" "-,-" 13 19 deletion chr21:33823676|chr21:36279180 GART(+)NA(NA) lsr TCGA-AB-2908 k44_491798 1322 "chr21:36299301-36301755,chr21:33697606-33709198" "1-1002,1002-1322" "-,-" 170 187 deletion chr21:33709198|chr21:36299301 IFNGR2(-)NA(NA) lsr TCGA-AB-2908 k46_308306 1481 "chr21:36299301-36302002,chr21:33697695-33709198" "232-1481,1-232" "+,+" 170 184 deletion chr21:33709198|chr21:36299301 IFNGR2(+)NA(NA) lsr TCGA-AB-2908 k46_303546 1992 "chr21:36299301-36302518,chr21:33697695-33709198" "232-1992,1-232" "+,+" 170 190 deletion chr21:33709198|chr21:36299301 IFNGR2(+)NA(NA) lsr TCGA-AB-2939 k44_505895 9952 "chr1:11089228-11196210,chr5:98227011-98290081" "4519-9952,1-4519" "-,-" 18 57 translocation chr1:11196210|chr5:98227011 FRAP1(+)CHD1(+) gene_fusion TCGA-AB-2939 k34_2402896 895 "chr1:197896908-197897423,chr7:16652301-16680738" "1-516,516-895" "-,-" 5 19 translocation chr1:197896908|chr7:16680738 NA(NA)BZW2(-) lsr TCGA-AB-2939 k30_3484878 947 "chr1:197896908-197897532,chr7:16652358-16680738" "323-947,1-323" "+,+" 5 19 translocation chr1:197896908|chr7:16680738 NA(NA)BZW2(+) lsr TCGA-AB-2939 k32_2908413 1686 "chr1:191357918-191388198,chr5:92981914-92982592" "678-1686,1-679" "-,+" 13 11 translocation chr1:191388198|chr5:92982592 CDC73(-)FAM172A(-) gene_fusion TCGA-AB-2939 k28_4091475 4084 "chr5:92979516-92982592,chr1:191357918-191388198" "1-3077,3076-4084" "+,-" 13 13 translocation chr1:191388198|chr5:92982592 CDC73(+)FAM172A(+) gene_fusion TCGA-AB-2939 k26_4738640 1204 "chr7:130687872-130688609,chr5:83565374-83565840" "1-738,738-1204" "+,-" 6 8 translocation chr5:83565840|chr7:130688609 EDIL3(-)MKLN1(-) gene_fusion TCGA-AB-2939 k26_2516218 171 "chr1:73989311-73989443,chr1:82225029-82225066" "1-133,134-171" "+,-" 5 6 inversion chr1:73989443|chr1:82225066 NA(NA)LPHN2(-) lsr TCGA-AB-2915 k42_693228 5360 "chr3:170283989-170582007,chr21:35128577-35153747" "4-5062,5062-5360" "+,+" 50 62 translocation chr21:35128577|chr3:170582007 RUNX1(-)EVI1(-) In-frame PRASLNHSTAFNPQPQSQMQ|DNECVYGNYPEIPLEEMPDA gene_fusion TCGA-AB-2915 k38_1339848 1181 "chr3:170581018-170582007,chr21:35128577-35128768" "192-1181,1-192" "-,-" 46 59 translocation chr21:35128577|chr3:170582007 RUNX1(+)EVI1(+) gene_fusion TCGA-AB-2915 k42_705826 4388 "chr3:170283989-170582007,chr21:35128577-35153747" "299-4385,1-299" "-,-" 50 60 translocation chr21:35128577|chr3:170582007 RUNX1(+)EVI1(+) gene_fusion TCGA-AB-2915 k44_444638 1578 "chr3:170317047-170582007,chr21:35128577-35153747" "299-1569,1-299" "-,-" 50 60 translocation chr21:35128577|chr3:170582007 RUNX1(+)EVI1(+) gene_fusion TCGA-AB-2915 k42_708858 1397 "chr3:170321538-170582007,chr21:35128577-35153747" "1-1099,1099-1397" "+,+" 50 63 translocation chr21:35128577|chr3:170582007 RUNX1(-)EVI1(-) gene_fusion TCGA-AB-2915 k26_4607897 2663 "chr3:170759531-170761493,chr21:35118922-35119614" "700-2663,1-693" "-,-" 6 44 translocation chr21:35118922|chr3:170761493 RUNX1(+)EVI1(+) gene_fusion TCGA-AB-2915 k40_980919 11679 "chr3:170751535-170761493,chr21:35118922-35120622" "1721-11679,14-1714" "-,-" 6 44 translocation chr21:35118922|chr3:170761493 RUNX1(+)EVI1(+) gene_fusion TCGA-AB-2915 k26_4502539 2618 "chr10:87351973-87665976,chr20:49005129-49008483" "278-2618,1-278" "-,-" 15 20 translocation chr10:87665976|chr20:49005129 DPM1(+)GRID1(+) In-frame PDGTRDVAEQLEKIYGSDRI|AVETNLASKDSHWVFVNEEI gene_fusion TCGA-AB-2915 k30_3264263 845 "chr3:170677622-170678281,chr21:35128577-35128768" "1-659,654-845" "+,+" 24 9 translocation chr21:35128577|chr3:170678281 RUNX1(-)EVI1(-) gene_fusion TCGA-AB-2915 k26_4584998 750 "chr3:170677620-170678281,chr21:35128577-35128671" "90-750,1-95" "-,-" 24 9 translocation chr21:35128577|chr3:170678281 RUNX1(+)EVI1(+) gene_fusion TCGA-AB-2915 k32_2711281 445 "chr3:170581669-170582006,chr21:35153641-35153747" "108-445,1-107" "-,-" 4 9 translocation chr21:35153641|chr3:170582006 RUNX1(+)EVI1(+) gene_fusion TCGA-AB-2919 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2918 k34_2438347 1149 "chr3:101831131-101833726,chr3:101915176-101921593" "1-838,837-1149" "-,-" 36 75 duplication chr3:101831131|chr3:101921593 TFG(-)GPR128(-) gene_fusion TCGA-AB-2918 k32_2862787 723 "chr3:101831131-101831542,chr3:101915176-101921593" "312-723,1-313" "+,+" 36 75 duplication chr3:101831131|chr3:101921593 TFG(+)GPR128(+) gene_fusion TCGA-AB-2918 k44_525817 2958 "chr3:101831131-101896888,chr3:101915176-101921593" "1-2633,2632-2944" "-,-" 36 76 duplication chr3:101831131|chr3:101921593 TFG(-)GPR128(-) gene_fusion TCGA-AB-2918 k38_1495905 840 "chr3:101915011-101921593,chr3:101831131-101831494" "363-840,1-364" "-,-" 36 74 duplication chr3:101831131|chr3:101921593 TFG(-)GPR128(-) gene_fusion TCGA-AB-2918 k32_2929969 799 "chr3:101831131-101832614,chr3:101915176-101921593" "1-488,487-799" "-,-" 36 75 duplication chr3:101831131|chr3:101921593 TFG(-)GPR128(-) gene_fusion TCGA-AB-2918 k42_799602 5375 "chr5:176494693-176599473,chr11:3898791-3900576" "11-3591,3589-5374" "+,-" 14 19 translocation chr11:3900576|chr5:176599473 NSD1(-)STIM1(+) Out-of-frame gene_fusion TCGA-AB-2918 chr11:3722315|chr5:176595425 NUP98(+)NSD1(+) gene_fusion TCGA-AB-2930 k44_553170 8014 "chr11:3652906-3713132,chr5:176495547-176571802" "1-5056,5055-8014" "+,-" 19 56 translocation chr11:3713132|chr5:176571802 NSD1(-)NUP98(-) In-frame DMEKEPGIPSLTPQAELPEP|ALTDPNASAAQQAVLQQHIN gene_fusion TCGA-AB-2930 k26_4835848 936 "chr5:176595425-176606403,chr11:3722315-3731215" "1-704,702-936" "-,+" 4 8 translocation chr11:3722315|chr5:176595425 NUP98(+)NSD1(+) In-frame APGFNTTTATLGFGAPQAPV|AVRSEKKRLRKPSKWLLEYT gene_fusion TCGA-AB-2921 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2924 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2928 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2936 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2943 k46_286664 293 "chr3:178230573-178230797,chr3:178481657-178481724" "1-225,226-293" "-,-" 9 30 duplication chr3:178230573|chr3:178481724 TBL1XR1(+)NA(NA) lsr TCGA-AB-2943 k38_1451132 830 "chr3:178230573-178231345,chr3:178481668-178481724" "58-830,1-57" "+,+" 9 34 duplication chr3:178230573|chr3:178481724 TBL1XR1(-)NA(NA) lsr TCGA-AB-2943 k36_1819340 594 "chr13:72201087-72210182,chr17:38349708-38349920" "1-381,382-594" "+,+" 29 22 translocation chr13:72210182|chr17:38349708 C13orf34(+)NA(NA) lsr TCGA-AB-2943 k26_4716181 396 "chr17:38349708-38349975,chr13:72207099-72210182" "1-268,269-396" "-,-" 28 22 translocation chr13:72210182|chr17:38349708 C13orf34(-)NA(NA) lsr TCGA-AB-2943 k28_4049323 2340 "chr2:6951178-6955329,chr2:85467777-85468039" "263-2340,1-263" "+,-" 11 12 inversion chr2:6951178|chr2:85467777 RSAD2(+)ELMOD3(-) gene_fusion TCGA-AB-2943 k36_1445335 164 "chr2:6951054-6951182,chr2:85467738-85467772" "36-164,1-35" "-,+" 10 10 inversion chr2:6951182|chr2:85467772 RSAD2(-)ELMOD3(+) gene_fusion TCGA-AB-2943 k38_396035 133 "chr2:6951087-6951182,chr2:85467736-85467772" "38-133,1-37" "-,+" 10 11 inversion chr2:6951182|chr2:85467772 RSAD2(-)ELMOD3(+) gene_fusion TCGA-AB-2934 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2944 k44_549508 1929 "chr3:129821743-129846516,chr3:170863815-170863981" "165-1929,1-167" "-,-" 13 56 deletion chr3:129846516|chr3:170863815 RPN1(+)EVI1(+) Out-of-frame AAGLGTA*DPKAGQGNWPQ|VKGEDEEENNLEVRETKIKGK gene_fusion TCGA-AB-2944 k28_4087361 2241 "chr3:170857465-170859577,chr3:129888717-129888844" "129-2241,1-128" "+,+" 7 10 deletion chr3:129888844|chr3:170857465 NA(NA)EVI1(-) Out-of-frame lsr TCGA-AB-2944 k36_1959825 2046 "chr3:170857465-170859344,chr3:129888679-129888844" "1-1880,1881-2046" "-,-" 7 10 deletion chr3:129888844|chr3:170857465 NA(NA)EVI1(+) Out-of-frame lsr TCGA-AB-2944 k32_2953341 2101 "chr3:170857465-170859426,chr3:129888706-129888844" "140-2101,1-139" "+,+" 7 10 deletion chr3:129888844|chr3:170857465 NA(NA)EVI1(-) Out-of-frame lsr TCGA-AB-2946 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2956 k38_1285768 3883 "chr11:117812766-117858420,chr9:20353555-20355746" "126-3883,1-129" "-,+" 9 14 translocation chr11:117858420|chr9:20355746 MLL(-)MLLT3(-) gene_fusion TCGA-AB-2956 k26_4205259 1082 "chr14:67232980-67233628,chr14:67203530-67203964" "434-1082,1-435" "-,-" 5 7 duplication chr14:67203530|chr14:67233628 VTI1B(+)NA(NA) lsr TCGA-AB-2956 k28_3638689 391 "chr14:67210844-67211116,chr14:67229404-67229523" "119-391,1-120" "+,+" 4 7 duplication chr14:67210844|chr14:67229523 VTI1B(-)RDH11(-) gene_fusion TCGA-AB-2882 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2909 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2988 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2982 k34_2080553 2601 "chr7:148026972-148120845,chr7:153388992-153392497" "1-2145,2143-2601" "+,-" 9 13 inversion chr7:148120845|chr7:153392497 CUL1(+)DPP6(-) gene_fusion TCGA-AB-2982 k36_1669894 2612 "chr7:148026977-148120845,chr7:153388976-153392497" "1-2140,2138-2612" "+,-" 9 13 inversion chr7:148120845|chr7:153392497 CUL1(+)DPP6(-) gene_fusion TCGA-AB-2982 k38_1300620 1152 "chr17:35758092-35765908,chr15:72112772-72112808" "1-1117,1116-1152" "-,-" 18 11 translocation chr15:72112808|chr17:35758092 PML(-)RARA(-) gene_fusion TCGA-AB-2982 k32_2519823 712 "chr17:35758092-35761848,chr15:72112549-72112808" "1-454,453-712" "-,-" 18 12 translocation chr15:72112808|chr17:35758092 PML(-)RARA(-) gene_fusion TCGA-AB-2982 k26_4147508 897 "chr15:72112891-72113496,chr17:35750399-35750689" "292-897,1-291" "-,-" 4 9 translocation chr15:72113496|chr17:35750399 PML(-)RARA(-) gene_fusion TCGA-AB-2888 k46_142332 397 "chr16:65628043-65673714,chr16:15722353-15722411" "56-387,1-59" "-,+" 8 14 inversion chr16:15722411|chr16:65673714 MYH11(+)CBFB(+) gene_fusion TCGA-AB-2990 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2845 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2949 k36_863758 1420 "chr3:117011765-117646494,chr3:119198718-119199104" "1-1036,1034-1420" "+,+" 14 29 deletion chr3:117646494|chr3:119198718 LSAMP(-)NA(NA) lsr TCGA-AB-2981 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2999 k26_262651 418 "chr15:72112549-72112808,chr17:35758092-35758243" "159-418,9-160" "-,-" 8 4 translocation chr15:72112808|chr17:35758092 PML(-)RARA(-) In-frame IGSEVFLPNSNHVASGAGEA|AIETQSSSSEEIVPSPPSPP gene_fusion TCGA-AB-2896 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2952 k30_2368051 318 "chr17:26446272-26446513,chr17:27386694-27386772" "1-242,240-318" "+,+" 4 15 deletion chr17:26446513|chr17:27386694 NF1(+)LRRC37B(+) In-frame WPRTGRWNGSRPWSAASTSR|DMGTTHITLTTLKNILTMTV gene_fusion TCGA-AB-2952 k34_1619964 352 "chr17:26446274-26446513,chr17:27386694-27396868" "1-240,238-352" "+,+" 4 15 deletion chr17:26446513|chr17:27386694 NF1(+)LRRC37B(+) In-frame WPRTGRWNGSRPWSAASTSR|DMGTTHITLTTLKNILTMTV gene_fusion TCGA-AB-2952 k26_3389059 316 "chr17:26446248-26446513,chr17:27386694-27386746" "51-316,1-53" "-,-" 4 15 deletion chr17:26446513|chr17:27386694 NF1(-)LRRC37B(-) In-frame WPRTGRWNGSRPWSAASTSR|DMGTTHITLTTLKNIL gene_fusion TCGA-AB-2952 k30_2403228 1034 "chrX:39216826-39217429,chrX:48819081-48819515" "431-1034,1-435" "+,-" 6 5 inversion chrX:39216826|chrX:48819081 NA(NA)WDR45(+) lsr TCGA-AB-2952 k32_1314194 587 "chr12:9914172-9914603,chr12:67976862-67977017" "1-432,432-587" "-,-" 5 5 duplication chr12:9914172|chr12:67977017 NA(NA)NA(NA) lsr TCGA-AB-2920 k36_2753655 1019 "chr12:10233490-10234377,chrX:122821697-122821824" "128-1015,1-128" "-,+" 13 12 translocation chr12:10234377|chrX:122821824 C12orf59(-)XIAP(+) gene_fusion TCGA-AB-2920 k32_4080011 340 "chrX:119384403-119384661,chr12:103519814-103519900" "1-259,254-340" "-,-" 17 17 translocation chr12:103519900|chrX:119384403 CHST11(-)ATP1B4(-) In-frame DICCRKGSRSPLQELYNPIQ|DDPDEANQNYLADEEEEAEE gene_fusion TCGA-AB-2920 k32_4046164 10613 "chr12:103640158-103648416,chrX:119319277-119321644" "2368-10613,1-2368" "-,-" 6 14 translocation chr12:103648416|chrX:119319277 CHST11(-)FAM70A(+) gene_fusion TCGA-AB-2920 k48_127793 725 "chr17:58938332-58940477,chr17:43090979-43091026" "1-680,678-725" "-,-" 122 154 deletion chr17:43091026|chr17:58938332 KPNB1(-)ACE(-) In-frame LLNSLEFTKANFDKE|GFGTMGHHTSCPHPKQEEQG gene_fusion TCGA-AB-2920 k46_459666 1310 "chr17:43082504-43091026,chr17:58938332-58940367" "568-1310,1-570" "-,-" 122 154 deletion chr17:43091026|chr17:58938332 KPNB1(-)ACE(-) In-frame AATNALLNSLEFTKANFDKE|GFGTMGHHTSCPHPKQEEQG gene_fusion TCGA-AB-2920 k42_1168788 1176 "chr17:43082504-43091025,chr17:58938147-58939443" "1-742,741-1176" "+,+" 136 35 deletion chr17:43091025|chr17:58938147 KPNB1(+)ACE(+) In-frame AATNALLNSLEFTKANFDKE|MTSTMRPRPRSSCSFMTKQG gene_fusion TCGA-AB-2920 k46_451606 1499 "chr17:58938332-58940367,chr17:43082504-43091026" "741-1499,1-743" "+,+" 122 157 deletion chr17:43091026|chr17:58938332 KPNB1(+)ACE(+) In-frame AATNALLNSLEFTKANFDKE|GFGTMGHHTSCPHPKQEEQG gene_fusion TCGA-AB-2920 k30_4805728 2686 "chr17:58928695-58930063,chr17:43092266-43093531" "1318-2686,19-1286" "+,+" 11 2 deletion chr17:43093531|chr17:58928695 KPNB1(+)ACE(+) Out-of-frame gene_fusion TCGA-AB-2920 k38_2117842 1835 "chr17:43092418-43093531,chr17:58928695-58929375" "10-1123,1155-1835" "+,+" 11 2 deletion chr17:43093531|chr17:58928695 KPNB1(+)ACE(+) Out-of-frame gene_fusion TCGA-AB-2920 k28_5597319 2690 "chr17:58928695-58930086,chr17:43092275-43093531" "1298-2690,4-1266" "+,+" 11 2 deletion chr17:43093531|chr17:58928695 KPNB1(+)ACE(+) Out-of-frame gene_fusion TCGA-AB-2920 k26_6521556 1285 "chrX:123482046-123523351,chr17:22807930-22901861" "237-1255,1-239" "-,+" 8 4 translocation chr17:22901861|chrX:123523351 KSR1(-)ODZ1(-) In-frame QLPPLQRLAVHFQREAGGGA|DGCPGLCFGNGRCTLDQNGW gene_fusion TCGA-AB-2920 k42_1083715 1627 "chr12:10203154-10215957,chrX:122821621-122821824" "1-1424,1424-1627" "+,-" 24 15 translocation chr12:10215957|chrX:122821824 XIAP(-)OLR1(-) In-frame PSPWTEPIAAGQFGPAVLAR|LNLEMTFDDLKIQTVKDQPD gene_fusion TCGA-AB-2920 k40_1600506 1567 "chr12:10203156-10215957,chrX:122821418-122821824" "146-1567,1-146" "-,+" 24 15 translocation chr12:10215957|chrX:122821824 XIAP(+)OLR1(+) In-frame PSPWTEPIAAGQFGPAVLAR|LNLEMTFDDLKIQTVKDQPD gene_fusion TCGA-AB-2920 k44_752414 2053 "chr12:10202656-10215957,chrX:122821697-122821824" "128-2053,1-128" "-,+" 24 15 translocation chr12:10215957|chrX:122821824 XIAP(+)OLR1(+) In-frame PSPWTEPIAAGQFGPAVLAR|LNLEMTFDDLKIQTVKDQPD gene_fusion TCGA-AB-2920 k44_758788 547 "chr18:12826850-12874237,chr5:158626707-158626955" "1-298,299-547" "-,+" 52 79 translocation chr18:12826850|chr5:158626707 PTPN2(+)UBLCP1(+) gene_fusion TCGA-AB-2920 k30_4818296 4773 "chr17:38581333-38719144,chr17:22645251-22645588" "338-4773,1-338" "+,+" 4 21 deletion chr17:22645588|chr17:38581333 WSB1(+)NBR1(+) In-frame NQTVPHRWPAFPRGSTRKRS|PHSMEPQVTLNVTFKNEIQS gene_fusion TCGA-AB-2920 k46_438385 452 "chr17:62783738-62793123,chr17:43897808-43897936" "114-452,1-129" "+,-" 11 25 inversion chr17:43897808|chr17:62783738 NA(NA)PSMD12(+) In-frame??? WDLLNENIMLLSKRRSQLKQ|KIVYIPAWAWWLMPVIQHFG lsr TCGA-AB-2841 k30_2877491 789 "chr17:35728039-35741174,chr15:72113872-72113924" "54-781,1-53" "-,-" 19 42 translocation chr15:72113872|chr17:35741174 PML(-)RARA(-) gene_fusion TCGA-AB-2841 k26_3930150 1422 "chr17:35751919-35752645,chr15:72113872-72114566" "696-1422,1-695" "-,-" 11 13 translocation chr15:72113872|chr17:35752645 PML(-)RARA(-) gene_fusion TCGA-AB-2841 k36_1563429 2531 "chr15:72113872-72115788,chr17:35752037-35752645" "610-2526,1-609" "+,+" 11 13 translocation chr15:72113872|chr17:35752645 PML(+)RARA(+) gene_fusion TCGA-AB-2841 k30_2837879 1445 "chr17:35751923-35752645,chr15:72113872-72114593" "723-1445,1-722" "-,-" 11 13 translocation chr15:72113872|chr17:35752645 PML(-)RARA(-) gene_fusion TCGA-AB-2841 k34_1962301 551 "chr17:35758092-35759703,chr15:72112549-72112808" "1-293,292-551" "-,-" 23 10 translocation chr15:72112808|chr17:35758092 PML(-)RARA(-) In-frame IGSEVFLPNSNHVASGAGEA|AIETQSSSSEEIVPSPPSPP gene_fusion TCGA-AB-2811 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A TCGA-AB-2979 k26_3375585 6088 "chr4:151902384-152155464,chr4:152288628-152290165" "1-5866,5864-6088" "-,-" 6 7 duplication chr4:151902384|chr4:152290165 LRBA(+)SH3D19(+) Out-of-frame QNSIQKNAGLAFIELVNEGR|NPTTQVKQEVLCEYPQGCHR gene_fusion TCGA-AB-2977 no events found N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A