ID	chrom	loc.start	loc.end	num.mark	seg.mean
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	1	51598	16692220	8850	-0.0233
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	1	16693206	17134384	186	-0.4214
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	1	17134475	25465715	5350	-0.0266
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	1	25468468	25519573	27	0.584
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	1	25534088	72541504	29098	-0.0114
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	1	72541524	72583736	45	-0.6067
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	1	72584492	105820759	21248	0.006
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	1	105820833	105823898	15	0.7225
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	1	105825578	110025907	2676	0.0216
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	1	110025950	110034497	15	-0.4552
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	1	110034560	110044476	17	-1.2434
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	1	110046521	145172740	7923	-0.0211
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	1	145174167	145174448	4	-0.9216
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	1	145174653	150822151	2274	-0.0338
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	1	150822330	150853200	34	1.0629
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	1	150853218	151028547	178	-0.0186
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	1	151028563	151040529	37	0.5522
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	1	151043379	167483561	11463	-0.0158
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	1	167500598	167508390	7	0.84
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	1	167509025	187914780	13562	-0.0019
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	1	187915106	187915150	2	-1.6328
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	1	187918670	247191011	41259	-0.0038
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	2	2784	34554898	24361	-0.0065
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	2	34555087	34590561	44	0.4375
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	2	34590667	87366798	35572	-0.0029
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	2	87367890	87373867	3	-1.3379
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	2	87374716	106246527	7642	-0.0118
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	2	106247145	106251789	11	0.9297
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	2	106253687	180043351	44931	0.0031
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	2	180043380	180043439	2	-2.4593
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	2	180044828	184502045	2873	0.0085
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	2	184502096	184516834	19	-0.562
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	2	184517039	242738129	36194	0.0021
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	3	35345	6617395	5920	-0.0011
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	3	6617536	6630430	35	-0.3174
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	3	6633264	8796804	1908	0.0042
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	3	8800367	8828177	22	0.4875
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	3	8831126	37952421	20092	-0.0012
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	3	37957112	37963632	26	-0.6031
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	3	37963740	65415958	18108	-0.0064
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	3	65417120	65429412	8	-0.9371
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	3	65429630	68828949	2242	-0.0012
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	3	68828974	68829513	6	-0.8727
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	3	68829530	75632408	4995	-5e-04
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	3	75632636	75691329	17	-0.8724
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	3	75695864	76783073	589	-0.0065
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	3	76786548	76786556	2	1.4859
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	3	76787118	89754349	7379	0.0216
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	3	89754371	89756830	5	-1.2345
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	3	89761289	100427989	3158	0.0103
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	3	100428085	100435133	29	0.4999
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	3	100436451	129862942	18252	0.0036
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	3	129863939	129896851	17	0.7721
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	3	129903856	131249276	634	-0.025
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	3	131258548	131281471	47	0.5263
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	3	131281703	157570887	16431	-0.0015
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	3	157575891	157576280	2	2.0544
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	3	157579085	163990962	4028	0.0045
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	3	163995351	164108689	71	0.5029
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	3	164109266	194360596	19350	0.0034
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	3	194360656	194365597	19	-0.9503
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	3	194369129	196901834	1505	0.0066
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	3	196903444	196916079	11	0.5814
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	3	196918950	196941719	19	0.1133
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	3	196942560	196961756	12	0.707
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	3	196964365	199380515	1184	-0.0075
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	4	2281	69054598	42830	0.0026
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	4	69057536	69092819	13	1.2932
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	4	69092837	69096538	7	0.1681
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	4	69102618	69171930	46	1.1323
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	4	69187710	162665774	56802	0.011
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	4	162669280	162669658	2	1.7047
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	4	162669751	171229835	5442	0.0121
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	4	171230167	171286490	27	-0.3933
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	4	171287042	173225875	1274	0.0223
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	4	173225948	173226108	8	-1.098
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	4	173232554	185313549	8162	0.0096
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	4	185313636	185313697	2	-1.8327
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	4	185314095	191261904	4108	-0.0103
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	5	68532	6221539	4949	-2e-04
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	5	6225968	6238548	12	-0.7318
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	5	6241186	17644656	8598	-1e-04
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	5	17644832	17663173	16	0.9181
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	5	17669503	23643946	3596	0.0211
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	5	23646283	23646347	3	-1.2421
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	5	23646557	46282417	13932	0.0029
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	5	46287063	46361535	16	0.5892
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	5	46361945	57355239	5111	0.01
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	5	57357343	57369290	34	0.8484
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	5	57374114	61567649	2838	-0.0023
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	5	61571161	61571588	2	-1.6593
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	5	61576014	103879120	24255	0.0093
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	5	103888272	103888503	4	1.0246
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	5	103888948	123029113	13138	0.0069
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	5	123038939	123038942	4	-1.1911
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	5	123045037	180722926	37607	-0.0057
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	6	94661	239725	147	-0.0864
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	6	239837	325821	81	-0.6374
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	6	326149	18896757	14548	-0.01
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	6	18897736	18897943	2	-1.665
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	6	18899410	31394284	7953	-0.006
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	6	31394510	31403385	5	-1.0558
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	6	31403932	55933454	15721	-0.0095
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	6	55934114	55951619	10	-0.9344
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	6	55958837	66450811	3892	0.0171
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	6	66456203	66460573	24	-0.6203
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	6	66463848	79019608	8313	0.013
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	6	79025784	79113512	134	0.2983
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	6	79116509	103841522	15620	0.0066
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	6	103844669	103868754	46	0.6209
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	6	103872163	170892930	44744	0.0011
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	7	52911	54347867	38975	3e-04
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	7	54353999	54354011	6	0.9381
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	7	54360982	125832210	39243	-4e-04
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	7	125832718	125833851	12	0.9987
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	7	125834112	141409593	10012	-0.0035
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	7	141416112	141436652	39	0.4305
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	7	141436672	141694120	202	0.0456
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	7	141699450	141712586	28	1.2189
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	7	141715788	142156294	384	-0.0291
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	7	142156339	142167486	37	0.6576
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	7	142176272	143540378	865	-0.0072
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	7	143542557	143608286	18	-0.6255
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	7	143608325	158819765	9837	-0.0082
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	8	21254	3771595	3496	0.0156
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	8	3774468	3778955	28	-0.5955
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	8	3779146	6827707	4333	0.0232
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	8	6846225	6863552	4	-1.3317
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	8	6865598	11932654	3615	-0.0023
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	8	11934586	12071716	12	-0.6021
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	8	12072406	12276652	11	0.0349
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	8	12276787	12286526	22	0.7127
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	8	12286886	12287550	8	0.0068
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	8	12289563	12291857	9	0.7987
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	8	12305298	12575113	80	-0.0735
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	8	12575194	12575375	2	-2.0408
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	8	12577158	40301274	20336	0.0032
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	8	40302954	40308668	34	0.3431
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	8	40312067	49061736	2782	-0.0179
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	8	49066809	49072512	3	0.9564
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	8	49075291	50968655	1061	-0.0052
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	8	50969008	50970762	3	1.1848
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	8	50970887	72374735	13566	-3e-04
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	8	72374919	72378988	8	1.1133
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	8	72379055	97291071	15164	0.0097
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	8	97291094	97293273	3	-1.5271
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	8	97297184	142652718	30796	-0.0066
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	8	142652973	142653053	2	-1.7051
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	8	142653490	146268959	1464	-0.0521
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	9	30910	11829955	11296	0.0046
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	9	11830010	11831788	3	-1.1604
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	9	11832185	21171454	7858	0.0022
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	9	21174475	21186312	19	-0.5542
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	9	21186326	29081097	5912	0.0136
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	9	29084549	29090799	4	-1.7714
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	9	29091432	44364447	6758	-0.0112
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	9	44386132	44569219	4	-1.0842
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	9	44667855	44777523	38	0.6614
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	9	44780914	78959214	6990	-0.0064
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	9	78960218	78975948	30	0.4735
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	9	78975962	137292823	40798	-0.0078
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	9	137294091	137449168	117	0.517
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	9	137450244	140211215	1064	-0.0195
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	10	62759	24415269	19476	-0.0047
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	10	24417680	24418060	11	0.9014
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	10	24418914	49866388	13934	-0.0197
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	10	49867490	49869501	2	-2.4651
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	10	49869567	71200779	14732	0.0027
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	10	71200845	71200985	2	-1.7487
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	10	71201760	84932204	9040	-0.0201
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	10	84937126	84937702	4	-1.0205
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	10	84937863	87189251	1700	-0.0139
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	10	87189885	87208752	24	-0.9108
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	10	87212075	107046269	12424	-0.002
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	10	107047028	107049160	3	-2.3649
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	10	107052466	135356694	20822	-0.005
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	11	188510	4924693	2518	-0.0157
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	11	4925086	4934958	45	0.3202
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	11	4939492	5740499	793	0.0054
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	11	5743981	5766037	35	0.9214
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	11	5768936	33400163	20093	-0.0018
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	11	33401105	33402203	3	-0.8874
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	11	33405604	33627853	159	-0.0136
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	11	33628217	33630120	2	1.2674
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	11	33633501	48554998	10174	-6e-04
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	11	48558010	48559252	2	-2.1598
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	11	48562894	49664951	460	-0.0221
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	11	49667437	49716632	29	0.6849
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	11	49717264	51033319	383	-0.0777
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	11	51040151	51051627	5	1.146
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	11	51061717	55108112	371	-0.0247
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	11	55109699	55217259	75	-0.3369
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	11	55217364	58767743	2213	0.0044
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	11	58771234	58771325	2	-1.7178
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	11	58771360	79645161	11239	-0.0217
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	11	79645196	79645212	2	2.447
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	11	79645334	122106829	29994	-0.0019
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	11	122106907	122107680	3	-1.5146
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	11	122107804	124580589	1895	-0.0101
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	11	124580661	124593480	29	-0.8951
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	11	124593537	134106222	7340	-0.0035
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	11	134107001	134115950	13	0.5509
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	11	134119190	134449982	281	-0.0069
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	12	20703	736231	426	-0.0167
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	12	739370	744290	18	-0.6421
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	12	745615	8248774	5182	-0.0224
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	12	8253317	8262587	9	0.9043
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	12	8264024	11099715	1741	-0.0257
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	12	11104058	11132799	17	0.5667
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	12	11143141	62207110	32260	0.0018
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	12	62211072	62421072	70	0.4358
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	12	62421694	132288262	46312	-7e-04
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	13	17924949	18209241	75	-0.0192
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	13	18209607	18281274	18	-0.4948
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	13	18293638	110521195	63290	0.0092
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	13	110522125	110522533	2	-1.7475
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	13	110522546	114126499	1808	-0.0227
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	14	18072124	18871755	61	0.0118
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	14	18872541	19492423	136	0.5937
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	14	19493212	34496525	9936	0.0093
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	14	34498746	34499497	3	-1.9763
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	14	34504169	34579399	43	-0.0316
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	14	34579490	34579525	2	-1.5273
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	14	34580548	40678108	3819	-0.0091
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	14	40680246	40726999	14	-0.4529
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	14	40727099	105618552	41775	0.0022
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	14	105619258	105632486	8	-1.5436
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	14	105638145	106356482	420	-0.0796
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	15	18276341	18529787	59	-0.0231
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	15	18544080	18838435	45	-1.0657
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	15	18841465	18841578	7	0.2268
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	15	18846002	19548935	218	-1.1629
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	15	19555435	20089383	130	-0.6836
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	15	20224763	32511565	7530	-0.0107
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	15	32514464	32514481	2	-1.9045
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	15	32514914	80840216	30546	-0.0047
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	15	80843133	80999222	20	-0.5572
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	15	81001249	81060297	40	0.0752
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	15	81060456	81060811	2	-1.8163
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	15	81062806	100286563	14129	-0.0018
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	16	777	13705633	10623	-0.0113
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	16	13705700	13708820	2	-1.6814
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	16	13709826	32779776	9888	-0.0121
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	16	32780794	33149454	31	0.4298
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	16	33208395	34317210	309	-0.1066
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	16	34324072	34614572	171	0.3964
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	16	34618468	88815036	32223	-0.0078
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	17	526	18299671	11642	-0.0116
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	17	18299674	18405946	28	1.061
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	17	18409922	25976412	3330	-0.0195
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	17	25988203	27422509	643	-0.4131
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	17	27422846	31461241	3040	-0.0176
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	17	31464091	31610407	45	-0.3888
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	17	31653809	36676603	2577	-0.0237
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	17	36676616	36684057	20	-0.4552
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	17	36686250	39750878	1645	-0.0177
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	17	39752431	39756006	3	-1.192
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	17	39773022	74875108	21319	-0.0057
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	17	74877129	74900696	19	0.6717
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	17	74912218	78643088	1646	0.0012
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	18	1543	1029386	758	-0.0108
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	18	1029426	1036527	4	-1.1483
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	18	1036560	36514478	22336	0.0014
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	18	36514488	36519387	14	-1.1148
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	18	36522022	76116029	28282	0.0075
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	19	41910	9137166	3480	-0.0205
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	19	9138476	9139121	2	-1.5156
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	19	9145760	21583139	6358	-0.0227
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	19	21585805	21586199	2	-1.5608
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	19	21586482	23179680	927	-0.0403
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	19	23185126	23185463	2	-1.5952
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	19	23185717	56823625	14606	-0.0177
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	19	56834164	56840009	11	0.704
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	19	56846717	60974181	2587	-0.021
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	19	60974347	60974879	3	-3.3222
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	19	60978105	63789666	1874	-0.0155
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	20	9305	1508999	1222	-0.0233
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	20	1509580	1541893	44	1.2204
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	20	1545946	62426597	41703	-0.0125
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	21	9758742	46921385	24735	0.0016
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	22	14432528	14661595	48	0.0913
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	22	14727194	14779151	14	0.6239
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	22	14782835	17949001	1703	-0.0265
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	22	17951664	17952769	2	-4.2861
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	22	17953172	22601745	2928	-0.0271
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	22	22613016	22700430	43	-0.4567
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	22	22701070	23993985	865	-0.0409
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	22	23994249	23994801	2	-1.6957
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	22	23994832	28200258	3575	-0.0129
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	22	28200312	28203001	4	1.0293
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	22	28211701	32503406	2968	-0.0277
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	22	32504947	32504973	3	-2.2561
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	22	32504985	41222540	5585	-0.0109
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	22	41227226	41280435	26	-0.4348
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	22	41285375	49581321	6209	-0.0159
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	23	108477	7549014	3840	0.2083
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	23	7549133	7549155	2	-1.2899
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	23	7551351	25646251	12048	0.207
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	23	25646353	25663923	7	-0.4921
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	23	25666527	38000186	8086	0.2332
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	23	38000429	38354246	270	0.6684
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	23	38354688	38447466	86	0.2446
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	23	38454159	38869201	311	0.675
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	23	38870878	128147465	44859	0.2088
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	23	128148291	128154647	12	-0.6572
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	23	128155859	154835548	16136	0.2068
JOUAL_p_TCGA_b96_SNP_N_GenomeWideSNP_6_H05_748022	24	2675209	57427647	8837	-0.2075
