Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F02_771704	1	3208470	245880329	129002	0.0018
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F02_771704	2	474222	122307161	63966	2e-04
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F02_771704	2	122308111	122315622	2	-1.7989
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F02_771704	2	122316135	222179257	55311	7e-04
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F02_771704	2	222179704	222179760	2	1.2414
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F02_771704	2	222180806	239155060	10370	0.0019
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F02_771704	2	239155989	239158845	5	-0.8362
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F02_771704	2	239158985	242124735	1575	0.0088
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F02_771704	3	526235	177600896	95217	0.0022
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F02_771704	3	177603439	177614858	3	-1.1646
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F02_771704	3	177616458	199023074	11103	-1e-04
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F02_771704	4	1043934	189836143	102686	0.0012
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F02_771704	5	967233	103970776	54478	6e-04
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F02_771704	5	103975676	103976134	6	-0.8416
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F02_771704	5	103980580	115562847	6922	-0.0055
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F02_771704	5	115565294	115565301	2	-1.3508
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F02_771704	5	115565331	121454590	3371	-0.0068
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F02_771704	5	121454611	121455160	3	-1.0173
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F02_771704	5	121455372	180293075	35707	-8e-04
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F02_771704	6	959281	75597817	41231	0.0023
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F02_771704	6	75600586	75600850	2	-2.6955
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F02_771704	6	75601640	159082992	49063	0
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F02_771704	6	159086152	159092842	7	-1.1278
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F02_771704	6	159103550	166964069	4976	-0.0042
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F02_771704	6	166967617	166967983	3	-1.0975
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F02_771704	6	166969111	170745844	1165	-0.0111
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F02_771704	7	671810	158077879	81275	0.0031
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F02_771704	8	607667	29400381	17047	0.0043
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F02_771704	8	29403417	29404248	2	-2.0906
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F02_771704	8	29406041	98336203	36451	3e-04
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F02_771704	8	98337558	98337940	2	-2.3545
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F02_771704	8	98340206	145304484	27978	5e-04
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F02_771704	9	779932	140058573	67962	0.0037
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F02_771704	10	405240	54485598	31283	0.0017
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F02_771704	10	54493356	54501554	11	-1.0223
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F02_771704	10	54504338	119545052	39564	0.0026
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F02_771704	10	119551748	119554192	2	-1.7013
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F02_771704	10	119555528	135075077	9951	8e-04
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F02_771704	11	446120	4053093	1301	-0.0026
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F02_771704	11	4054828	4055356	2	-1.4724
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F02_771704	11	4055589	133647740	75906	4e-04
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F02_771704	12	760163	131671419	73908	-2e-04
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F02_771704	13	18348806	114005560	56620	0.0039
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F02_771704	14	19571208	105059083	49413	1e-04
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F02_771704	15	21238778	87760146	37263	1e-04
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F02_771704	15	87761516	87761864	3	-1.3231
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F02_771704	15	87765635	90339868	1531	3e-04
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F02_771704	15	90340744	90344074	3	-0.9768
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F02_771704	15	90344382	99701830	5701	0.0021
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F02_771704	16	593460	11352073	5811	-0.0033
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F02_771704	16	11352227	11354773	2	-1.7146
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F02_771704	16	11354859	87907437	35034	-0.001
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F02_771704	17	933971	63735174	29529	2e-04
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F02_771704	17	63735417	63735420	2	-1.5077
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F02_771704	17	63735612	78510305	7429	0.0067
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F02_771704	18	319586	46527183	26429	0.0015
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F02_771704	18	46527289	46528403	2	-1.4412
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F02_771704	18	46529422	75210228	16222	0.0012
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F02_771704	19	235018	63570038	23931	0.0014
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F02_771704	20	403764	48570002	28276	0.002
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F02_771704	20	48570469	48570485	2	-2.2759
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F02_771704	20	48570544	61690281	8971	-0.001
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F02_771704	21	14269492	46503202	20576	-0.0011
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F02_771704	22	15803930	47717016	16911	0.0023
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F02_771704	X	3167107	154558783	63707	0.0013
