Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	1	3218610	88389644	48828	-0.0024
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	1	88391527	88392440	2	1.2299
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	1	88392623	118709865	17855	0.0102
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	1	118710297	118710404	2	-1.3621
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	1	118711080	120527361	1067	0.0438
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	1	149879545	153192829	1550	0.3055
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	1	153203220	153533898	185	0.7081
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	1	153534027	162280725	4911	0.2684
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	1	162283911	162284234	3	-0.9437
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	1	162286942	172449599	7488	0.289
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	1	172450082	172450390	2	-0.8265
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	1	172450689	174140228	988	0.2948
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	1	174140295	174370753	94	-0.0327
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	1	174373271	180480658	3533	0.2617
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	1	180480783	180590639	90	0.5904
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	1	180591223	187936290	4813	0.2745
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	1	187942223	187944356	3	-0.7654
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	1	187950408	189089711	683	0.2228
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	1	189090169	189121717	27	-0.1331
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	1	189124739	247813706	36949	0.2673
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	2	484222	67758755	39367	0.0175
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	2	67760955	67765892	5	-0.7545
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	2	67768512	69584719	1133	0.0413
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	2	69585176	69586293	2	-2.1794
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	2	69586315	203215831	67144	0.017
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	2	203215853	206423147	1773	-0.3541
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	2	206425470	206633843	161	-0.8693
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	2	206635841	242476062	21623	-0.343
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	3	2212571	15955434	8320	0.0023
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	3	15956165	16000619	31	-0.4326
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	3	16008259	20676227	2662	-0.0074
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	3	20680443	20763258	56	-0.4727
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	3	20763637	101030744	43582	-0.0015
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	3	101031379	164297622	34873	0.3694
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	3	164302657	164307458	4	-0.3609
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	3	164312088	188726085	12576	0.5063
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	3	188726254	188727271	2	-0.8913
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	3	188728262	192596365	2420	0.5304
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	3	192596397	192612450	7	-0.0898
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	3	192612465	197538677	1800	0.5062
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	4	1053934	52699760	28113	-0.3584
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	4	52699776	84186158	17664	0.0103
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	4	84189474	84244949	37	0.3751
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	4	84247125	87137562	1796	0.0207
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	4	87137635	87503394	188	-0.3191
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	4	87504971	87524439	6	0.237
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	4	87524796	87572133	20	-0.3567
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	4	87577134	188763651	54841	0.0069
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	5	914233	54479016	28645	0.0053
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	5	54479576	54479958	5	-0.7888
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	5	54482807	58345148	2490	0.0307
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	5	58347453	132196254	39770	-0.3416
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	5	132196383	180360469	29552	0.0034
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	6	1014281	21988752	14664	0.0333
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	6	21988819	21988835	2	-1.5781
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	6	21989092	102250847	41206	0.0062
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	6	102252797	102358841	66	-0.4534
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	6	102367396	150642796	28766	0.0172
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	6	150644384	150644476	2	-1.4024
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	6	150647013	170903919	11754	0.0072
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	7	705284	130833874	66576	0.0059
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	7	130834583	130835547	3	-1.2382
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	7	130835595	133490821	1651	0.0036
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	7	133494134	133644598	104	-0.3019
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	7	133647667	158385118	12937	0.0031
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	8	617667	1820745	557	-0.0021
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	8	1821492	1821516	2	-1.4463
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	8	1822439	29899883	16864	0.01
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	8	29902956	29913870	6	-0.9628
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	8	29920825	90227331	31293	0.0225
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	8	90236626	90405395	155	-0.2827
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	8	90413247	124205340	19549	0.0587
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	8	124209157	124300193	35	-0.2433
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	8	124302036	145232496	13040	0.0764
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	9	789932	16841763	9587	0.1213
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	9	16843773	16847804	2	-1.9208
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	9	16848442	102756989	34944	0.009
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	9	102758655	102840348	37	-0.3051
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	9	102845065	140938752	23411	0.0055
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	10	415240	71399208	40807	0.0013
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	10	71400233	71400861	2	-1.7966
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	10	71401017	126073072	34884	0.0057
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	10	126073849	126074233	2	-2.0857
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	10	126074726	135225087	5124	0.0036
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	11	456120	49059801	30074	-0.3449
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	11	49061714	84333241	14936	0.0062
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	11	84336695	84437045	39	-0.4036
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	11	84507779	92700236	4897	0.0159
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	11	92705158	92707188	7	0.805
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	11	92708710	98396251	3346	0.0171
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	11	98396656	99718371	949	0.4928
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	11	99721370	101428874	1426	1.0085
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	11	101430040	105460042	2220	0.7007
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	11	105463037	116429690	7114	-0.3376
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	11	116430949	116434429	5	-2.0737
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	11	116436140	134142530	12161	-0.345
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	12	889902	39223566	19545	-0.3359
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	12	39228083	133161346	54340	0.0039
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	13	19450806	114987458	56625	-0.0048
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	14	20501368	45392807	12846	0.0018
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	14	45393495	45543918	55	-0.3132
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	14	45547775	66300707	12466	0.007
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	14	66301697	66301776	2	-1.3179
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	14	66302808	68755417	1172	3e-04
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	14	68758851	68788983	28	0.4041
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	14	68790884	105988038	22853	-6e-04
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	15	23687685	75117198	29241	0.0089
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	15	75117844	98240026	13255	0.2915
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	15	98240944	98267695	36	-0.0364
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	15	98268054	101884307	1980	0.5401
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	16	653459	86456837	39435	0.0077
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	16	86456876	86457338	2	-2.0066
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	16	86458156	89379936	1349	-0.0068
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	17	987221	57767142	25254	-0.0061
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	17	57767650	57872848	37	-0.2968
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	17	57873928	80917016	11677	0.0064
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	18	329586	14062284	8143	0.0083
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	18	14362422	14641844	62	-0.2863
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	18	14642856	59425123	25382	0.001
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	18	59435911	59830927	255	0.2916
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	18	59831462	77109240	8809	-0.005
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	19	284018	14147263	4992	0.2261
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	19	14147593	58878226	18945	-0.0231
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	20	455764	14546696	8919	0.0043
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	20	14551755	15552895	366	-0.6176
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	20	15554640	37902090	11658	0.0073
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	20	37902689	37905178	4	-1.1026
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	20	37905674	38878611	743	0.0205
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	20	38879237	38880000	2	-1.5482
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	20	38880195	45644463	4471	0.0051
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	20	45645884	45646903	4	-1.0807
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	20	45646963	62219837	11092	0.006
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	21	15347621	47678774	20572	0.016
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	22	17423930	49331012	16915	-0.0111
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	X	3157107	85797122	33019	-0.1294
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	X	85797379	125925093	18120	0.1394
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	X	125927624	125927857	3	-1.1242
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	X	125928756	150280253	11353	0.1437
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	X	150280408	150541246	184	-0.1229
STOPS_p_TCGA_b101_114_SNP_N_GenomeWideSNP_6_F05_771678	X	150541412	154905589	1061	0.1778
