Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_F10_845268	1	3218610	247813706	128949	-6e-04
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_F10_845268	2	484222	242476062	131097	-0.0017
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_F10_845268	3	2212571	54205736	29662	0.0036
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_F10_845268	3	54205850	54206076	3	-1.6452
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_F10_845268	3	54214619	81802802	17126	-9e-04
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_F10_845268	3	81805498	81806626	3	-1.2947
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_F10_845268	3	81807543	95499955	4950	0.0069
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_F10_845268	3	95500438	95506627	3	-1.2169
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_F10_845268	3	95508664	187899002	49682	-0.0013
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_F10_845268	3	187901252	187903562	4	-1.4698
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_F10_845268	3	187908708	197538677	4790	0.0062
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_F10_845268	4	1053934	43424452	25781	0.0032
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_F10_845268	4	43424930	43425162	3	-1.2907
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_F10_845268	4	43428426	61327312	7700	0.003
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_F10_845268	4	61329994	61331617	2	1.8405
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_F10_845268	4	61335564	86643857	13790	5e-04
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_F10_845268	4	86643908	86644102	2	1.4229
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_F10_845268	4	86644130	106292275	10821	0.0025
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_F10_845268	4	106295847	106297189	2	-1.5691
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_F10_845268	4	106297229	125459405	10862	5e-04
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_F10_845268	4	125460351	125462935	3	-1.959
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_F10_845268	4	125463025	188763651	33635	0.0037
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_F10_845268	5	914233	180360469	100345	0.0024
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_F10_845268	6	1014281	33082884	19322	0.0057
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_F10_845268	6	33082898	33083485	2	1.907
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_F10_845268	6	33084671	103628874	37171	0.0024
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_F10_845268	6	103631884	103632636	2	-2.1346
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_F10_845268	6	103632984	170903919	39852	0.0058
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_F10_845268	7	705284	158385118	81211	0.004
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_F10_845268	8	617667	27887562	16161	0.0065
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_F10_845268	8	27887575	27890858	3	-1.4189
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_F10_845268	8	27890920	128442469	55084	5e-04
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_F10_845268	8	128447549	128452766	2	-1.8138
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_F10_845268	8	128453765	145232496	10185	-0.0023
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_F10_845268	9	789932	140938752	67916	0.0032
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_F10_845268	10	415240	110207283	64514	0.0013
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_F10_845268	10	110208205	110208251	2	-2.0129
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_F10_845268	10	110208767	121052733	7259	0.0051
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_F10_845268	10	121054326	121054378	2	-1.6791
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_F10_845268	10	121057914	135225087	8963	0.0035
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_F10_845268	11	456120	49483346	30238	0.002
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_F10_845268	11	49496036	49527968	14	-0.9357
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_F10_845268	11	49529507	134142530	46870	-2e-04
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_F10_845268	12	889902	133161346	73795	0.0031
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_F10_845268	13	19450806	114987458	56562	-0.0022
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_F10_845268	14	20501368	105988038	49352	0.0019
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_F10_845268	15	23687685	101884307	44456	-0.0018
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_F10_845268	16	653459	89379936	40719	0
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_F10_845268	17	987221	35309455	14079	0.0051
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_F10_845268	17	35309726	35309848	2	-1.8
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_F10_845268	17	35310631	80917016	22855	-0.0017
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_F10_845268	18	329586	74841184	41203	-2e-04
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_F10_845268	18	74845353	74850000	3	-1.3194
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_F10_845268	18	74851811	77109240	1378	0.0047
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_F10_845268	19	284018	58878226	23911	0.0042
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_F10_845268	20	455764	62219837	37229	-0.0022
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_F10_845268	21	15347621	47678774	20546	-0.0041
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_F10_845268	22	17423930	49331012	16898	7e-04
WHIRR_p_TCGA_168_169_170_redo_N_GenomeWideSNP_6_F10_845268	X	3157107	154905589	63729	0.0016
