Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	1	3208470	7713714	2837	0.3778
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	1	7718141	7858502	104	0.0491
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	1	7860155	7866801	3	-1.0236
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	1	7866851	8065230	105	-0.0072
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	1	8073811	12276894	2011	0.3391
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	1	12278074	12278090	2	-1.856
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	1	12279675	97375314	49168	0.4144
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	1	97376202	97376302	3	-1.5148
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	1	97376625	104488201	3886	0.4299
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	1	104488285	104488939	2	-1.9767
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	1	104489140	109285290	2646	0.4282
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	1	109306435	109310561	3	-1.6988
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	1	109310819	215830633	48972	0.419
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	1	215834456	215835843	3	-1.3965
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	1	215839930	218502622	1799	0.4496
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	1	218502996	218507341	5	-1.5424
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	1	218508992	245880329	17137	0.419
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	2	474222	146825700	76290	-0.0775
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	2	146829375	146954846	48	0.4866
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	2	146955159	148206951	660	-0.0871
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	2	148220253	148280141	35	0.5047
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	2	148286405	148394880	43	0.9973
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	2	148396083	150387602	1014	0.5173
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	2	150390606	153862593	2313	-0.0386
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	2	153868689	153920397	36	0.5341
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	2	153921308	166003344	6692	-0.0419
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	2	166004931	179166393	8268	0.5344
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	2	179168656	179169467	2	-1.9989
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	2	179169797	200383838	10553	0.5078
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	2	200384526	201761493	826	1.2399
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	2	201763506	201766482	3	0.3038
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	2	201769065	228289602	16026	-0.939
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	2	228289879	228295368	2	-4.7443
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	2	228296164	237205286	5113	-1.0101
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	2	237209840	237210180	2	-6.5735
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	2	237210251	242124735	2817	-1.042
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	3	526235	56561741	31459	-0.089
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	3	56562539	57893665	685	-1.0066
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	3	57902606	115775166	29758	-0.0751
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	3	115777489	116099244	199	-0.9723
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	3	116103076	123705797	4466	-0.0744
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	3	123705872	199023074	39451	0.2956
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	4	1043934	40038580	24030	-0.5467
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	4	40043377	65933645	11839	-0.0663
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	4	65934677	65969523	43	-0.5631
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	4	65971262	87850918	11800	-0.0549
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	4	87852335	87895139	20	0.4601
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	4	87897450	87910022	14	0.817
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	4	87910141	87936840	13	0.5626
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	4	87937782	189836143	54607	-0.0456
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	5	967233	180293075	100180	-0.081
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	6	959281	120259795	65856	-0.0842
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	6	120260105	120292209	26	-0.556
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	6	120293360	170745844	30282	-0.064
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	7	671810	68032371	35254	-0.0946
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	7	68033200	68036115	6	-1.2987
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	7	68037313	158077879	45818	-0.0894
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	8	607667	33659576	19673	-0.1263
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	8	33662068	33663851	2	-2.4026
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	8	33666228	59961552	11850	-0.1218
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	8	59962514	59964002	3	-1.9242
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	8	59964129	96344479	20495	-0.0774
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	8	96344625	96345252	2	-2.3026
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	8	96345468	128807494	19271	-0.0741
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	8	128808431	128883947	35	3.4496
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	8	128887583	145304484	9881	-0.1167
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	9	779932	4875267	2960	0.5731
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	9	4875437	4876080	3	-1.2553
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	9	4876266	5260603	224	0.5515
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	9	5263180	5413103	77	1.2578
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	9	5554748	13027425	3225	0.5134
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	9	13039749	13040207	2	-1.7431
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	9	13040957	16675468	2932	0.588
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	9	16675539	18242911	1188	0.2654
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	9	18243533	31022300	7880	0.5584
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	9	31023001	35649280	2751	0.2567
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	9	35652880	38737688	2025	0.5329
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	9	70228864	140058573	44509	0.0263
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	10	405240	4517869	2556	-0.1047
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	10	4517882	4523546	2	-2.0244
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	10	4523925	7781962	2412	-0.1301
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	10	7782617	7784025	2	-1.8173
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	10	7784316	118273902	64828	-0.1074
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	10	118276528	118276595	2	-3.0353
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	10	118277144	135075077	10780	-0.1021
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	11	446120	6100765	2617	-0.1413
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	11	6101016	6121204	13	-1.3074
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	11	6121276	117834688	63503	-0.0965
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	11	117834753	117834768	2	-2.1333
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	11	117834820	133647740	10837	-0.1141
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	12	760163	25270621	14224	0.4272
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	12	25270637	25270681	2	-2.5972
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	12	25272115	55546294	14913	0.4313
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	12	55546459	55552645	3	-1.4323
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	12	55553362	91526833	21553	0.4477
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	12	91526861	91571938	29	-0.0428
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	12	91572568	104086918	8049	0.4265
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	12	104087643	104093245	3	-0.6054
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	12	104093487	131671419	14985	0.4034
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	13	18348806	114005560	56437	-0.0847
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	14	19571208	19665855	41	0.0527
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	14	19669355	20216424	375	0.3277
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	14	20259512	20502812	133	-0.1058
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	14	20502973	24230184	1258	0.2851
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	14	24239072	24435633	192	-0.0395
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	14	24435793	25215247	540	0.2807
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	14	25222399	25453919	143	-0.1208
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	14	25464997	26460172	637	0.2318
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	14	26462441	27493425	471	-0.0969
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	14	27495134	27604858	25	0.2394
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	14	27606728	28492792	462	0.6065
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	14	28498990	28539138	19	1.5495
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	14	28540485	30110725	894	0.8017
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	14	30113335	32278520	1264	1.4857
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	14	32287581	32345787	44	0.8671
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	14	32347256	32596594	173	1.5192
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	14	32597477	66501815	19106	-0.5114
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	14	66508400	66788464	116	-1.6464
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	14	66792795	105059083	23303	-0.5627
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	15	21238778	99701830	44388	0.1385
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	16	593460	49955769	16669	-0.1571
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	16	49957763	49959005	2	-2.95
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	16	49962238	69396658	12062	-0.136
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	16	69396838	69763409	69	0.3177
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	16	69765229	87907437	11927	-0.1161
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	17	933971	11234443	5470	-0.1802
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	17	11236686	11239146	2	-2.3049
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	17	11240663	53172433	18776	-0.1266
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	17	53172906	53175939	3	-1.8482
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	17	53179948	56746846	1685	-0.1321
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	17	56747608	56751231	8	0.1522
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	17	56762740	56908335	96	0.6013
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	17	56914447	78510305	10823	0.2326
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	18	319586	37108484	20325	-0.0818
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	18	37128865	37131846	5	-4.8759
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	18	37142087	53490809	10467	-0.0842
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	18	53495949	53496080	2	-2.387
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	18	53496897	58918867	3437	-0.0414
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	18	58922831	58947606	36	3.0912
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	18	58951168	59021169	98	1.1391
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	18	59021369	59107228	104	1.8777
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	18	59107567	59134917	37	3.1187
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	18	59144495	75210228	7998	-0.0922
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	19	235018	34685625	10360	0.3058
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	19	34685696	34686423	2	-1.7643
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	19	34686562	63570038	13537	0.3262
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	20	403764	61690281	37154	-0.1277
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	21	14269492	46503202	20522	0.4526
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	22	15803930	47717016	16883	0.3553
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	X	3167107	46876003	19727	0.0158
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	X	46880097	46884496	2	-2.1913
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	X	46884773	55411435	2993	8e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	X	55412800	55413790	2	-2.5908
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	X	55413894	154558783	40851	0.0082
