Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	1	3218610	7791127	2837	0.3778
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	1	7795554	7935915	104	0.0491
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	1	7937568	7944214	3	-1.0236
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	1	7944264	8142643	105	-0.0072
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	1	8151224	12354307	2011	0.3391
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	1	12355487	12355503	2	-1.856
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	1	12357088	97602726	49230	0.4143
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	1	97603614	97603714	3	-1.5148
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	1	97604037	104686678	3886	0.4299
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	1	104686762	104687416	2	-1.9767
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	1	104687617	109483767	2646	0.4282
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	1	109504912	109509038	3	-1.6988
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	1	109509296	217764010	48969	0.419
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	1	217767833	217769220	3	-1.3965
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	1	217773307	220435999	1799	0.4496
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	1	220436373	220440718	5	-1.5424
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	1	220442369	247813706	17134	0.419
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	2	484222	147109230	76279	-0.0775
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	2	147112905	147238376	48	0.4866
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	2	147238689	148490481	660	-0.0871
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	2	148503783	148563671	35	0.5047
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	2	148569935	148678410	43	0.9973
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	2	148679613	150679356	1014	0.5173
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	2	150682360	154154347	2313	-0.0386
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	2	154160443	154212151	36	0.5341
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	2	154213062	166295098	6693	-0.0419
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	2	166296685	179458147	8267	0.5343
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	2	179460410	179461221	2	-1.9989
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	2	179461551	200675593	10555	0.5077
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	2	200676281	202053248	826	1.2399
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	2	202055261	202058237	3	0.3038
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	2	202060820	228581358	16026	-0.939
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	2	228581635	228587124	2	-4.7443
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	2	228587920	237540547	5114	-1.0099
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	2	237545101	237545441	2	-6.5735
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	2	237545512	242476062	2817	-1.0416
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	3	2212571	56586701	31459	-0.089
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	3	56587499	57918625	685	-1.0066
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	3	57927566	114292476	29753	-0.0751
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	3	114294799	114616554	199	-0.9723
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	3	114620386	122223107	4466	-0.0744
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	3	122223182	197538677	39450	0.2955
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	4	1053934	40343823	24031	-0.5467
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	4	40348620	66251050	11837	-0.0663
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	4	66252082	66286928	43	-0.5631
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	4	66288667	87631894	11800	-0.0549
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	4	87633311	87676115	20	0.4601
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	4	87678426	87690998	14	0.817
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	4	87691117	87717816	13	0.5626
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	4	87718758	188762240	54613	-0.0456
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	5	914233	180360469	100180	-0.081
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	6	1014281	120218096	65861	-0.0842
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	6	120218406	120250510	26	-0.556
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	6	120251661	170903919	30286	-0.064
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	7	705284	68394435	35254	-0.0946
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	7	68395264	68398179	6	-1.2987
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	7	68399377	158385118	45819	-0.0894
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	8	617667	59798998	31525	-0.1248
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	8	59799960	59801448	3	-1.9242
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	8	59801575	96275303	20498	-0.0774
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	8	96275449	96276076	2	-2.3026
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	8	96276292	128738312	19275	-0.0741
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	8	128739249	128814765	35	3.4496
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	8	128818401	145232496	9881	-0.1167
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	9	789932	4885267	2960	0.5731
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	9	4885437	4886080	3	-1.2553
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	9	4886266	5270603	224	0.5515
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	9	5273180	5423103	77	1.2578
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	9	5564748	13037425	3226	0.5134
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	9	13049749	13050207	2	-1.7431
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	9	13050957	16685468	2933	0.5877
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	9	16685539	18252911	1188	0.2654
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	9	18253533	31032300	7879	0.5584
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	9	31033001	35659280	2756	0.2558
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	9	35662880	38747688	2025	0.5329
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	9	71039044	140938752	44515	0.0264
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	10	415240	4527869	2556	-0.1047
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	10	4527882	4533546	2	-2.0244
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	10	4533925	7741956	2412	-0.1301
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	10	7742611	7744019	2	-1.8173
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	10	7744310	118283912	64826	-0.1073
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	10	118286538	118286605	2	-3.0353
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	10	118287154	135225087	10780	-0.1021
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	11	456120	6144189	2616	-0.1414
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	11	6144440	6164628	13	-1.3074
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	11	6164700	134142530	74333	-0.0991
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	12	889902	25379354	14221	0.4272
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	12	25379370	25379414	2	-2.5972
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	12	25380848	57260027	14912	0.4314
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	12	57260192	57266378	3	-1.4323
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	12	57267095	93002702	21553	0.4478
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	12	93002730	93047807	29	-0.0428
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	12	93048437	105562788	8049	0.4265
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	12	105563513	105569115	3	-0.6054
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	12	105569357	133161346	14984	0.4034
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	13	19450806	114987458	56433	-0.0847
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	14	20501368	21146584	416	0.3006
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	14	21189672	21432972	133	-0.1058
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	14	21433133	25160344	1258	0.2851
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	14	25169232	25365793	192	-0.0395
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	14	25365953	26145407	540	0.2807
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	14	26152559	26384079	143	-0.1208
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	14	26395157	27390332	637	0.2318
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	14	27392601	28423585	471	-0.0969
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	14	28425294	28535008	25	0.2394
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	14	28536879	29423041	462	0.6065
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	14	29429239	29469387	19	1.5495
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	14	29470734	31040974	894	0.8017
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	14	31043584	33208769	1264	1.4857
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	14	33217830	33276036	44	0.8671
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	14	33277505	33526843	173	1.5192
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	14	33527726	67432062	19104	-0.5114
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	14	67438647	67718711	116	-1.6464
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	14	67723042	105988038	23303	-0.5627
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	15	23687685	101884307	44386	0.1385
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	16	653459	51398268	16669	-0.1571
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	16	51400262	51401504	2	-2.95
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	16	51404737	89379936	23992	-0.1261
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	17	987221	11293718	5470	-0.1802
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	17	11295961	11298421	2	-2.3049
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	17	11299938	55817434	18776	-0.1266
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	17	55817907	55820940	3	-1.8482
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	17	55824949	59392064	1685	-0.1321
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	17	59392826	59396449	8	0.1522
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	17	59407958	59553553	96	0.6013
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	17	59559665	80917016	10823	0.2326
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	18	329586	38854486	20325	-0.0818
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	18	38874867	38877848	5	-4.8759
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	18	38888089	55339811	10466	-0.0841
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	18	55344951	55345082	2	-2.387
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	18	55345899	60767887	3437	-0.0414
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	18	60771851	60796626	36	3.0912
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	18	60800188	60870189	98	1.1391
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	18	60870389	60956248	104	1.8777
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	18	60956587	60983937	37	3.1187
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	18	60993515	77109240	7996	-0.0921
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	19	284018	29993785	10360	0.3058
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	19	29993856	29994583	2	-1.7643
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	19	29994722	58878226	13537	0.3262
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	20	455764	11653566	7094	-0.1236
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	20	11653955	11654336	2	-2.0378
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	20	11656757	19231206	5212	-0.0905
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	20	19233911	19235204	2	-1.9819
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	20	19235343	62219837	24847	-0.1364
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	21	15347621	47678774	20521	0.4526
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	22	17423930	49331012	16882	0.3553
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	X	3157107	46991059	19728	0.0158
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	X	46995153	46999552	2	-2.1913
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	X	46999829	55394710	2994	8e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	X	55396075	55397065	2	-2.5908
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A05_1362232	X	55397169	154905589	40866	0.0082
