Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	1	3218610	120527361	67517	0.0097
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	1	149879545	166138738	9631	0.6145
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	1	166139958	226640677	37916	0.0887
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	1	226643069	226670999	11	-0.6153
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	1	226671906	247813706	13511	0.0872
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	2	484222	201460841	106346	0.0244
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	2	201464460	209117298	4275	-0.8725
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	2	209117317	209120258	2	-4.4916
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	2	209121610	234829900	15326	-0.8629
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	2	234834365	234835440	3	-6.0249
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	2	234835535	235676013	669	-0.8745
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	2	235676568	235676897	2	-5.9128
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	2	235683141	242476062	3953	-0.9083
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	3	2212571	3366612	589	-0.0513
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	3	3367221	3374486	11	-1.2269
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	3	3376422	84954900	47547	-0.0052
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	3	84954917	84958297	3	-1.5406
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	3	84958995	101620896	6574	-0.0384
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	3	101622326	101624629	5	-1.4045
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	3	101631630	119335896	10392	-0.0106
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	3	119337198	119337721	2	-1.2789
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	3	119339620	136132282	9545	0.0216
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	3	136132705	136233460	35	-0.8052
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	3	136242076	138590606	1092	0.0299
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	3	138592633	197538677	30168	0.5849
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	4	1053934	18671078	10826	0.0086
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	4	18671173	18672988	3	-1.9796
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	4	18682173	19363129	447	-0.0519
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	4	19369526	19516141	82	-0.9587
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	4	19519192	93468433	39612	-0.0187
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	4	93504575	108273565	8123	0.5643
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	4	108279221	108279743	2	-0.9688
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	4	108280094	128986874	11619	0.5482
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	4	128990442	128993646	3	-0.7645
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	4	128995463	178456243	26910	0.5512
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	4	178458105	181102846	1210	0.9103
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	4	181103729	183014495	1133	0.4971
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	4	183014878	183016944	2	-0.8327
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	4	183021079	188762240	2437	0.5874
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	5	914233	2654309	768	0.5727
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	5	2657283	2658026	2	-1.2859
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	5	2663723	12123260	7202	0.5555
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	5	12124497	12311932	93	0.009
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	5	12315052	12331200	15	-0.9752
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	5	12333743	41420447	15946	-0.0066
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	5	41420517	41425472	5	-0.9438
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	5	41435517	103627169	30114	0.019
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	5	103632694	113409641	5812	-0.8842
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	5	113418512	123448586	5757	0.0079
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	5	123452759	123453615	4	1.0201
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	5	123454304	142342856	10741	0.0312
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	5	142344310	142344324	2	-1.3951
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	5	142345454	142584948	200	0.0206
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	5	142594190	142599442	7	-0.686
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	5	142599713	146775475	2626	0.0323
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	5	146775499	146783656	12	-0.5171
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	5	146783786	155359434	5542	0.0474
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	5	155364967	180360469	15104	-0.8975
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	6	1014281	67873082	36696	0.0138
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	6	67876005	67932036	42	-0.9613
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	6	67933455	116609005	27364	-0.0105
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	6	116609250	116617525	2	1.428
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	6	116618092	134697015	10542	0.0122
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	6	134697377	134697440	2	-1.7881
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	6	134697996	170903919	21469	0.0136
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	7	705284	28694477	15461	0.0047
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	7	28701508	28701609	2	-1.4764
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	7	28703284	41505256	8146	-0.008
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	7	41505975	41506114	3	-1.3833
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	7	41506780	158385118	57421	0.0013
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	8	617667	3256097	1211	-0.9854
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	8	3256281	3256813	2	-4.8248
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	8	3257696	11309114	3610	-0.9481
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	8	11309277	11310012	5	-4.3714
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	8	11322997	27656430	10926	-0.9219
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	8	27663692	101983194	39428	0.0038
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	8	101988191	101992517	6	-0.9987
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	8	101993581	108812278	3805	0.0263
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	8	108813477	108814435	4	-1.1428
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	8	108815003	125495972	9800	0
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	8	125496824	145232496	12272	0.5981
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	9	789932	33706841	20247	0.0049
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	9	33707943	33708793	2	-2.4148
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	9	33709391	72476192	4121	0.0169
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	9	72478642	72478768	2	-2.5182
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	9	72479342	89542539	11675	-0.0061
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	9	89545960	89554097	8	-0.8947
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	9	89555673	140938752	31672	0.0146
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	10	415240	16606652	11687	0.5525
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	10	16609958	55664005	19961	-8e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	10	55664026	55664990	2	-1.9715
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	10	55674117	71195614	8906	-0.0112
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	10	71196975	71198894	2	-1.9393
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	10	71198994	114144907	26377	0.0082
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	10	114145777	114148689	3	-1.0895
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	10	114150782	120278944	4189	0.0089
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	10	120287011	120287418	2	-1.8286
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	10	120288156	122219478	1267	0.022
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	10	122220063	122222315	4	-1.2112
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	10	122224268	135225087	8143	0.0128
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	11	456120	2007244	417	-0.8562
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	11	2021075	2021893	4	-4.2088
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	11	2022496	9512580	4288	-0.8813
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	11	9516232	9681859	95	0.0515
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	11	9684463	62068685	28643	-0.8702
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	11	62069365	62080692	3	-4.8987
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	11	62080857	64025854	825	-0.7214
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	11	64039998	73879302	3913	0.3673
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	11	73885570	117581689	26815	-0.8557
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	11	117582134	117585714	5	-3.0446
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	11	117585788	117685705	84	-1.0247
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	11	117686829	117687120	3	-5.3423
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	11	117692038	134140152	11170	-0.9059
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	12	889902	133161346	73673	0.0088
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	13	19450806	50135336	19383	0.0079
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	13	50135463	50141362	5	-1.0289
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	13	50141579	58471446	3194	-0.0066
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	13	58471801	58474387	2	-2.563
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	13	58474692	114987458	33814	-0.0197
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	14	20501368	23737522	1077	0.0033
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	14	23742296	23794324	14	0.7429
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	14	23795976	23914573	67	1.0286
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	14	23914853	24407721	319	0.5881
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	14	24407916	24500645	31	0.2488
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	14	24500839	49331023	13086	0.5466
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	14	49333294	49334734	3	-0.7779
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	14	49337432	105988038	34689	0.5611
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	15	23687685	53387778	15338	0.0095
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	15	53389717	53390144	3	-1.692
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	15	53391483	74664851	13597	0.0175
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	15	74667509	74669383	4	-2.8023
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	15	74670824	76437983	669	0.0056
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	15	76439135	76444695	3	-1.8038
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	15	76445689	101884307	14699	0.026
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	16	653459	2879279	557	0.0529
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	16	2880105	3153898	95	0.5307
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	16	3154978	59800296	21851	0.0012
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	16	59801104	78492951	10926	0.5478
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	16	78493387	78493662	2	2.1818
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	16	78495361	89379936	7221	0.6042
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	17	987221	3092592	836	0.546
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	17	3095093	37854507	14324	-0.0137
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	17	37855834	37891065	54	3.3535
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	17	37899688	75209281	19347	0.014
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	17	75211312	80917016	2216	-0.9334
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	18	329586	4920704	2298	0.0358
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	18	4921081	6846738	858	0.9075
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	18	6848462	8375533	1137	0.5235
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	18	8380172	9029580	573	-0.0075
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	18	9031890	13114922	2581	-0.8961
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	18	13121953	13159765	23	0.0088
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	18	13162450	13260335	59	-0.9818
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	18	13267454	13320303	48	0.0655
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	18	13329015	13491039	118	-1.0016
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	18	13497071	13672314	149	0.0276
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	18	13676795	14632449	300	-0.8441
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	18	14641844	37269838	11199	0.012
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	18	37270134	37366644	54	-0.9002
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	18	37376944	77109240	23073	0.0112
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	19	284018	58878226	23862	-0.0167
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	20	455764	62219837	37143	0.0485
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	21	15347621	47678774	20495	0.0165
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	22	17423930	49331012	16845	0.0035
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	X	3157107	35785421	14414	0.4019
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	X	35786535	35814169	25	-0.1982
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	X	35821763	44804394	4221	0.4211
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	X	44809624	44877731	30	-0.0964
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	X	44886704	52766214	3161	0.4025
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A11_1362374	X	52818807	154905589	41732	-0.2066
