Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	1	3218610	9415857	3631	0.2792
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	1	9416852	9698262	118	-0.0962
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	1	9698333	247813706	124723	0.2996
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	2	484222	95362252	50090	0.3648
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	2	95369126	237535155	77173	-0.4882
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	2	237535463	237545441	6	-2.6058
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	2	237545512	238396963	617	-0.5104
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	2	238397372	238398522	6	-3.3351
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	2	238400702	238540292	99	-0.6001
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	2	238541449	238541766	2	-2.4927
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	2	238541938	239481608	528	-0.5418
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	2	239482191	239482459	2	-3.3776
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	2	239482474	242476062	1542	-0.541
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	3	2212571	59702821	33129	-0.0688
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	3	61026351	74812194	9907	0.5673
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	3	74812488	74813002	2	-1.3921
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	3	74813201	113505258	18293	0.5617
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	3	113506068	197538677	44513	1.0168
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	4	1053934	11134528	5338	-0.4453
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	4	11135173	11213536	68	-1.4362
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	4	11213936	11352199	108	-0.3836
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	4	11353935	11716994	350	0.0998
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	4	11723086	182207638	92876	-0.3746
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	4	182214800	182214915	2	-2.8016
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	4	182215005	188762240	3063	-0.375
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	5	914233	58080416	30839	0.6039
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	5	58080668	180360469	69083	-0.0423
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	6	1014281	5661403	3200	-0.5404
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	6	5662599	5666064	6	-3.727
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	6	5667016	10236624	3395	-0.521
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	6	10239788	10272624	41	-1.0633
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	6	10276337	17850142	4990	-0.5452
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	6	17850924	17860407	3	-4.4133
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	6	17861128	121172873	54221	-0.5001
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	6	121174803	121175001	2	-2.3949
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	6	121176271	126081612	2835	-0.4328
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	6	126082675	126402418	166	0.0662
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	6	126405925	134758808	5261	-0.4682
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	6	134763693	134764036	2	-3.1561
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	6	134764428	163638267	17855	-0.4953
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	6	163639213	163639850	2	-5.8514
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	6	163640022	167269979	2391	-0.5498
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	6	167271053	167271139	2	-4.6984
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	6	167271384	170903919	956	-0.5394
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	7	705284	73782238	37582	-0.0561
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	7	73785170	74142104	128	0.2381
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	7	74197728	158385118	43081	-0.0504
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	8	617667	145232496	80997	0.0167
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	9	789932	140938752	67538	0.0075
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	10	415240	135225087	80230	-0.0606
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	11	456120	1977372	410	0.0899
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	11	1977497	2119570	59	0.494
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	11	2128186	19579055	11373	-0.0518
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	11	19579262	19579427	2	-2.3622
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	11	19580233	70524547	24891	-0.0593
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	11	70528233	70531511	4	-1.6041
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	11	70535309	83123709	7278	-0.0507
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	11	83128199	120655024	23221	-0.5084
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	11	120656959	120662326	6	4.2458
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	11	120667041	120672230	5	-0.3594
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	11	120678600	120696297	17	4.3077
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	11	120696839	120725345	25	2.2132
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	11	120727803	134140152	9149	-0.4442
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	12	889902	61649350	31679	0.3042
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	12	61649750	61650261	2	-1.5694
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	12	61653660	133161346	41959	0.3088
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	13	19450806	73886705	30599	-0.052
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	13	73888058	74163230	215	0.398
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	13	74167495	106618677	20123	-0.0319
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	13	106619413	106619456	2	-2.2336
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	13	106619629	114987458	5289	-0.0506
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	14	20501368	71685559	28215	-0.0505
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	14	71686784	72073422	164	-0.563
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	14	72074421	105988038	20724	-0.0695
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	15	23687685	101884307	44300	0.287
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	16	653459	46507665	13817	0.3056
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	16	46508460	49954662	1893	-0.5479
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	16	49955122	49960257	6	-2.864
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	16	49961451	50703574	402	-0.5669
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	16	50703698	50714029	6	-3.1252
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	16	50719572	81420621	19493	-0.5395
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	16	81421075	81421457	2	-4.3082
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	16	81421484	88037328	4495	-0.594
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	16	88039150	88051561	4	-4.715
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	16	88052161	89379936	168	-0.5724
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	17	987221	80917016	36785	0.2752
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	18	329586	5175853	2442	0.1581
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	18	5178412	7226505	1046	-0.1734
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	18	7226860	26066816	9120	0.1664
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	18	26071751	26072281	2	-2.1477
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	18	26073212	57123494	19281	0.1635
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	18	57123909	57124645	3	-1.5706
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	18	57125321	77109240	10546	0.1665
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	19	284018	5454225	1235	-0.6058
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	19	5454763	5455386	2	-6.2001
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	19	5455422	10441403	2100	-0.5958
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	19	10453608	34290167	9783	-0.1242
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	19	34290995	34308164	6	-1.5783
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	19	34309277	39892270	2847	-0.1358
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	19	39914748	45247815	2305	0.2301
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	19	45253104	45275105	11	2.2936
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	19	45276310	45410473	41	0.6587
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	19	45416967	45427594	5	1.5268
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	19	45436331	58878226	5409	0.3336
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	20	455764	1913626	817	-0.5937
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	20	1916732	1919324	4	-4.8091
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	20	1921523	2618308	597	-0.4947
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	20	2618508	2624103	5	-3.0101
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	20	2624150	26195868	15177	-0.4452
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	20	26195886	41423380	6602	0.1566
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	20	41425238	41734588	213	-0.1624
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	20	41734761	62219648	13341	-0.5707
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	21	15347621	38273077	14515	-0.0447
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	21	38276032	38575195	156	-0.5365
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	21	38579419	47678774	5766	-0.0673
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	22	17423930	49331012	16775	-0.1211
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	X	3157107	65322177	24897	0.0097
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	X	65328960	65398388	40	0.6105
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	X	65408190	80845125	5827	-0.0138
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	X	80864848	80904522	18	-0.6321
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B02_1362244	X	80905740	154905589	32812	0.0094
