Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	51598	799636	66	-0.0106
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	802895	2940230	576	0.277
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	2940256	16843043	8107	0.0183
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	16878321	16929044	39	0.6543
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	16949054	17055024	22	-0.1408
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	17062591	17150527	65	0.5836
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	17155012	22170872	3335	0.0173
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	22173052	22191588	8	0.7273
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	22193102	25455878	1916	0.0171
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	25455928	25534799	32	0.4672
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	25535897	26706446	555	0.0123
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	26709108	26733693	10	0.6781
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	26736322	39877171	7109	0.0148
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	39887211	39931415	28	0.4646
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	39932735	108567878	44030	-0.004
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	108570825	108618702	2	-2.5495
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	108630480	110028919	702	0.0092
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	110029023	110044476	20	-0.7373
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	110046521	147173241	8318	-0.0089
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	147173894	147472039	109	-0.6906
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	147472053	150821800	1560	0.0332
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	150822151	150853218	36	1.2815
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	150857118	151028563	172	-0.0148
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	151028579	151040529	36	0.4173
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	151043379	176926556	17346	-4e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	176926632	176932572	20	0.534
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	176932656	195079130	12187	-0.0043
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	195079153	195082414	2	3.7846
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	195083353	196571159	821	-2e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	196573555	196577982	3	-1.7035
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	196578089	215749971	13329	0.0029
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	215752495	215773472	17	0.5234
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	215776513	218502622	1839	-0.0016
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	218502996	218507341	5	-0.9047
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	218508992	224081739	3558	0.0053
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	224081922	224138621	33	0.4074
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	224140782	229977917	3710	0.0063
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	229978198	230033485	43	0.4294
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	230041014	240188643	7945	0.0053
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	240194615	240225475	15	0.605
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	240232081	244907057	3195	0.0106
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	244911199	244959449	28	0.6732
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	244964001	246081238	733	-0.0073
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	246085049	246127164	24	0.3831
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	246127223	246414792	172	-0.0684
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	246414817	246415838	3	-1.2548
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	246420197	246676679	156	-0.0283
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	246677130	246716200	16	-0.8408
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	246726807	246764014	14	0.1961
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	246776239	246791857	5	-1.1944
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	246802698	247191011	179	0.0901
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	2	2784	179818	103	0.0799
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	2	179832	206029	20	0.7232
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	2	206376	3126143	2054	0.0194
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	2	3126868	3178002	64	0.3037
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	2	3178435	7521885	3646	0.0149
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	2	7523399	7574905	42	0.3661
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	2	7575058	32935088	16884	0.0038
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	2	32936700	32960763	14	0.6024
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	2	32960854	34564978	1263	-0.0037
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	2	34570274	34590561	30	0.4513
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	2	34590667	40186355	4043	-0.0109
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	2	40188914	40190144	4	-1.1671
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	2	40191571	52608385	8971	-0.0037
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	2	52612257	52643644	35	-0.6538
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	2	52643997	86981712	21961	-2e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	2	86982714	86990896	2	-1.9034
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	2	87015364	97385003	2066	0.0458
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	2	97385822	97575859	30	-0.511
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	2	97583221	105502069	4900	0.0102
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	2	105504557	105505244	2	1.4852
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	2	105505648	106240929	648	0.01
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	2	106241081	106253840	16	0.7685
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	2	106254302	107807168	991	-0.0195
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	2	107813401	107886808	8	0.9191
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	2	107892471	110534145	1203	0.0156
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	2	110542321	111113237	8	0.8357
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	2	111114271	123193484	7324	0.0065
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	2	123196369	123198711	9	-1.8811
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	2	123200123	125871090	1767	-0.0153
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	2	125872592	125872769	2	-1.7418
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	2	125874009	146578555	12593	0.0026
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	2	146580874	146595002	31	0.6809
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	2	146595115	179995401	20351	0.0072
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	2	179996226	180006205	9	-0.9789
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	2	180009513	195895093	9288	-0.0067
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	2	195895107	195897780	6	-1.5814
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	2	195898117	208052235	7240	0.0078
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	2	208053385	208068041	33	0.4855
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	2	208068391	242738129	22093	0.0059
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	35345	938381	739	-0.1319
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	941233	1003679	47	0.3524
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	1003770	11083154	8588	-0.0194
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	11085808	11090921	3	-1.5102
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	11093659	12671888	1139	0.01
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	12672075	12676396	12	0.5818
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	12676406	36258735	15959	-0.011
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	36258961	36260034	3	-1.6946
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	36260283	59716902	13798	2e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	59719703	59720741	2	-1.9763
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	59721113	60491296	927	-0.0961
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	60492603	60534087	43	0.4561
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	60534292	68828854	6463	0.0034
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	68828949	68829513	7	-1.2335
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	68829530	75447170	4840	0.0035
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	75449674	75449783	2	-2.239
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	75452394	75651239	90	0.1211
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	75655239	75669495	6	-1.5844
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	75677871	85575473	5474	-0.0056
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	85580368	85687761	63	-0.2759
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	85688503	104559508	7806	-0.008
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	104562192	104573961	9	-1.0865
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	104579810	131268630	16386	3e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	131268899	131326164	64	0.3388
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	131326238	133189386	1153	-0.0047
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	133190847	133200903	5	-0.9242
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	133206316	137501789	2850	0.0033
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	137505641	137508116	2	-2.2671
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	137521231	159687390	13523	-0.0038
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	159692179	159695522	5	-0.9946
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	159705532	163995843	2681	-0.0151
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	163996153	164098609	60	-1.1165
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	164106536	164164507	54	-0.1347
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	164164665	164164673	2	-2.2378
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	164164959	176204588	7282	-0.0072
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	176212952	176223283	14	-0.3766
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	176224277	176428606	162	0.0332
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	176428621	176428641	2	1.7758
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	176428704	190843448	9126	0.0067
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	190846372	190853682	12	-2.5429
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	190853708	192078475	907	0.0193
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	192079442	192079646	2	-1.4362
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	192101355	194079091	1373	-0.0025
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	194085307	194091245	19	0.481
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	194091292	194363281	199	-0.0254
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	194363420	194365597	11	-0.9758
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	194369129	196897393	1484	0.011
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	196903444	196941532	24	0.7728
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	196941547	197995289	491	0.0587
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	197995426	198040538	20	0.6495
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	198050453	198146551	46	0.0833
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	198146672	198233805	50	0.3383
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	198236315	199353968	579	0.0159
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	199380382	199380515	4	1.0669
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	4	2281	79609	81	-0.2411
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	4	79731	7482167	4222	0.0181
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	4	7482369	7518216	39	0.5133
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	4	7520938	9819061	1446	0.0183
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	4	9819211	9844280	39	0.4461
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	4	9844366	10001452	172	0.0025
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	4	10002252	10009766	15	-0.9529
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	4	10011816	25793925	11476	0.0012
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	4	25796126	25869049	41	0.294
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	4	25873810	32110027	3960	0.004
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	4	32111086	32180961	43	-0.4494
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	4	32183075	34464416	1260	-0.0051
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	4	34466911	34506344	36	0.3893
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	4	34506399	53368757	9507	-0.0033
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	4	53369576	53370306	3	-1.2259
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	4	53371398	57239259	2669	0.0045
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	4	57239523	57239788	2	1.6339
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	4	57243040	69027207	7262	-0.013
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	4	69043083	69168435	66	-1.3113
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	4	69168574	69477123	14	0.2635
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	4	69485755	69512426	2	1.8785
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	4	69571393	132329799	37689	-0.0074
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	4	132333360	132335717	2	0.7501
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	4	132336071	149706079	10336	-0.0068
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	4	149712643	149712662	2	-1.9854
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	4	149713604	153009236	1743	0.0024
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	4	153010983	153012017	12	-1.1021
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	4	153012341	162093450	5856	0.0024
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	4	162099468	162104358	21	-1.8752
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	4	162104369	172605921	6668	-0.0106
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	4	172611459	172614019	8	-1.0034
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	4	172614033	185839021	8865	-0.013
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	4	185840329	185840484	2	1.702
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	4	185845568	189673909	2678	0.0126
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	4	189674080	189674404	8	-0.8518
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	4	189676866	191261904	959	-0.0378
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	5	68532	751472	310	0.1152
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	5	751505	826190	25	-0.9712
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	5	826547	5859875	4220	0.0189
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	5	5860278	5862068	4	-1.1781
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	5	5863732	8754366	2390	0.0027
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	5	8754920	8796744	45	-0.2962
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	5	8799981	9404052	537	0.0174
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	5	9404349	9423882	31	0.4957
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	5	9423945	15776485	4640	1e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	5	15782327	15783060	4	-1.3492
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	5	15785283	21485033	3540	-0.0183
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	5	21486957	21487755	4	-1.9061
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	5	21488195	34295266	7966	-0.0108
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	5	34300104	34302334	5	-1.0438
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	5	34302437	50866526	7728	-0.0072
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	5	50868147	50899019	13	-0.5967
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	5	50901444	78471664	16849	-0.0051
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	5	78471945	78521698	25	0.4027
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	5	78527713	86147512	4446	-0.0095
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	5	86151134	86157385	4	-1.3243
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	5	86158523	124647089	24011	-0.0121
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	5	124648668	124649927	3	-1.6181
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	5	124650195	160472337	22770	-0.0034
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	5	160473766	160479370	10	-1.2459
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	5	160480239	174071312	9665	0.01
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	5	174071442	174133652	29	0.509
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	5	174133776	175305017	856	-9e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	5	175306114	175364181	10	0.8151
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	5	175365211	175392693	4	-0.624
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	5	175398295	175982314	241	0.0089
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	5	175983117	175983321	2	-0.5828
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	5	175985835	177100569	484	0.0874
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	5	177130561	177187571	6	0.9483
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	5	177192021	179037206	1085	0.0179
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	5	179037613	179037758	4	0.9475
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	5	179037873	180304774	716	0.0143
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	5	180307090	180349813	17	-0.6401
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	5	180350220	180722926	175	0.1408
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	6	94661	744902	549	-0.0528
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	6	745051	812007	58	0.371
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	6	812030	24330575	17940	0.0065
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	6	24330678	24361718	21	0.4645
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	6	24364531	24430016	37	0.0183
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	6	24433788	24434264	2	-1.5269
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	6	24436685	25160630	521	-0.0025
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	6	25164748	25190678	27	0.3654
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	6	25190819	26845011	1075	-0.0047
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	6	26845417	26874419	23	-0.45
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	6	26876548	29204012	1034	0.0129
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	6	29206348	29269414	8	-6.9579
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	6	29270819	29982787	417	-0.0215
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	6	29984938	30006876	8	-6.2579
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	6	30007656	30009555	5	-1.0851
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	6	30016448	53609717	14575	0.0052
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	6	53610597	53611418	3	-1.7338
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	6	53611652	54039110	359	-0.0204
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	6	54039189	54039814	6	-1.4727
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	6	54043307	66450811	5047	-0.0191
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	6	66456203	66460573	24	-0.6675
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	6	66463848	67263660	571	-0.0097
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	6	67264279	67280017	12	-0.6167
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	6	67281323	81334706	9171	-0.0103
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	6	81340908	81346253	33	-1.1129
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	6	81351060	101276171	12483	-0.0159
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	6	101281276	101286120	7	-0.7843
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	6	101291304	102805442	910	-0.0084
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	6	102805686	102811920	4	-1.78
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	6	102813156	103841522	595	-0.024
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	6	103844669	103868754	46	-0.8164
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	6	103872163	154553190	32617	-0.0024
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	6	154553226	154555581	3	-1.4199
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	6	154556809	170892930	11501	0.0131
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	52911	243383	93	0.1462
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	250149	253709	10	-2.2767
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	256525	5883710	2958	0.0416
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	5885566	5885636	2	1.5456
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	5890264	6091907	76	0.0187
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	6094981	6103389	7	0.6725
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	6112164	13177788	5429	-0.0311
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	13184576	13221932	35	0.3729
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	13223023	52675103	28647	-0.0056
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	52677332	52677669	4	-1.0566
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	52677801	54347867	1221	-0.0316
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	54353999	54354011	6	0.983
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	54360982	69967370	6234	0.0177
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	69973349	69999573	19	0.5982
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	70000527	71185567	805	0.0122
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	71186247	71223672	22	0.6062
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	71225183	76078613	1422	0.0236
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	76099426	76112596	6	0.917
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	76112646	90867404	9619	-0.0242
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	90869278	90878663	27	-0.6727
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	90884929	97233396	3964	-0.0029
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	97233398	97233442	6	0.9754
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	97233445	97620757	206	0.0326
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	97624715	97629533	3	-1.6078
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	97631145	109221034	6423	0.0041
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	109224328	109225010	16	0.6656
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	109228153	120309719	6604	-0.0076
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	120311810	120346939	17	-0.5009
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	120347149	125364742	3087	0.0026
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	125366992	125393765	25	-0.3734
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	125398077	125832210	303	0.0077
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	125832718	125833851	12	1.2678
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	125834112	133429192	4698	-0.0063
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	133435717	133459332	40	0.3868
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	133465931	141417001	5196	-0.0064
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	141417096	141429438	9	-1.0362
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	141430653	142154515	471	0.0181
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	142156294	142165614	27	-1.9769
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	142165684	143039363	504	0.0018
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	143056311	143142348	48	0.4449
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	143144674	143504885	288	-0.0464
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	143527185	143634600	28	0.5272
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	143634679	154020828	6449	-0.0053
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	154024104	154030546	4	-1.8061
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	154031763	158167022	2800	0.0112
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	158167086	158167134	2	-1.415
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	158167164	158819765	432	0.051
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	8	21254	3151892	2592	0.0078
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	8	3156758	3157491	4	-1.3867
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	8	3158001	5561766	3453	-0.0259
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	8	5563877	5564078	5	0.9949
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	8	5564152	12276652	5233	0.0221
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	8	12276787	12356009	57	0.6507
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	8	12366268	16963457	4110	-0.0193
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	8	16963495	16964039	2	-2.3154
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	8	16969068	25028104	6331	0.0039
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	8	25030360	25040167	26	0.6298
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	8	25040250	51067763	13572	0.0034
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	8	51069039	51100459	21	-0.5621
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	8	51100756	107134643	34238	-0.0042
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	8	107135324	107274482	84	-0.284
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	8	107276332	109900983	1758	-0.0077
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	8	109907874	110026244	57	-0.2966
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	8	110026949	112363470	1279	-0.0099
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	8	112363642	112364436	8	1.3976
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	8	112369457	115703843	1825	-0.0137
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	8	115703883	115731957	36	-0.4859
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	8	115734562	143004249	19811	0.0038
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	8	143004460	143006031	2	-1.5482
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	8	143006461	145291828	849	0.0729
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	8	145295179	145889935	170	0.3578
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	8	145890527	146268959	192	0.0372
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	9	36587	22471286	19816	-0.0107
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	9	22471753	22499340	14	-0.6505
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	9	22499658	23081710	391	-0.0093
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	9	23081724	23089502	7	-0.5533
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	9	23101314	23351805	179	0.0065
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	9	23353115	23363484	8	-1.8382
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	9	23368488	28154645	3642	-0.017
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	9	28154681	28199903	46	0.3318
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	9	28203049	37492109	6042	-0.0173
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	9	37494703	37504032	15	0.6373
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	9	37505711	45338940	1308	0.003
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	9	45361386	45596440	13	-0.7412
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	9	45613030	67673801	104	-0.0122
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	9	67675871	67675877	4	1.5518
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	9	67675879	128656986	42013	-7e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	9	128657242	128699773	23	0.6323
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	9	128702461	137358684	4972	0.0187
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	9	137358972	137359154	2	1.5203
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	9	137359537	139347996	672	0.0683
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	9	139348013	139375463	17	0.685
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	9	139375539	140211215	414	0.0498
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	10	62759	489188	235	-0.0348
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	10	489353	542408	48	0.5476
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	10	546129	48391956	31899	0.0074
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	10	48457816	48460633	2	4.0702
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	10	48503408	57917409	6149	-0.0182
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	10	57918675	57922128	5	-0.9102
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	10	57924616	66978036	6318	-0.0017
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	10	66978597	66992801	24	0.592
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	10	66992932	67452004	399	0.0157
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	10	67454435	67455043	2	-1.5365
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	10	67455183	79910212	7956	1e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	10	79910495	79914604	3	-1.9141
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	10	79914629	80299358	369	0.0184
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	10	80301340	80301515	2	-1.5504
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	10	80303004	81434093	506	0.0124
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	10	81439209	81587120	23	-0.7327
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	10	81587759	102052640	13580	-2e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	10	102052882	102084584	27	0.4669
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	10	102093404	118273902	10770	-0.0015
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	10	118276528	118276595	2	-3.0504
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	10	118277144	118464176	130	0.0124
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	10	118464309	118494297	19	0.4774
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	10	118496745	135356694	12398	0.0156
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	11	188510	430343	98	0.2558
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	11	435389	4225840	1698	0.0137
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	11	4228996	4276289	14	-1.6746
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	11	4276290	4315864	10	-0.4642
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	11	4341373	4919208	634	-0.0051
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	11	4919328	4919995	3	-0.8479
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	11	4920008	6095373	1129	-0.0162
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	11	6100765	6121204	13	-0.8975
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	11	6121276	6874384	540	0.0086
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	11	6874689	6877349	7	-0.7324
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	11	6877468	12901083	4602	0.0074
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	11	12901634	12901793	2	-2.1998
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	11	12901825	12902779	4	-0.7167
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	11	12903278	15145985	1463	-0.0046
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	11	15146086	15152375	4	0.9627
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	11	15152392	18897446	2509	-0.0043
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	11	18905648	18918564	56	-1.0192
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	11	18918592	26720278	6202	-0.0094
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	11	26723126	26727502	8	-0.6852
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	11	26727559	27866267	753	-0.0204
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	11	27866416	27873971	3	-1.5823
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	11	27874292	55132856	14835	-0.0085
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	11	55133074	55209585	51	-0.4864
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	11	55210152	65015493	5362	0.0061
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	11	65027491	65100904	25	0.7135
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	11	65103931	81181116	9195	0.0075
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	11	81181640	81192975	6	-1.6479
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	11	81193344	81194806	4	-5.6643
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	11	81200280	85983465	3172	-0.0147
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	11	85983523	85983702	3	-2.3975
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	11	85992822	88032310	1469	-0.0147
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	11	88033488	88036598	6	-0.9205
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	11	88038106	89183400	648	-0.0142
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	11	89186575	89220000	6	1.1228
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	11	89242221	101099594	8686	-0.0057
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	11	101103070	101103174	4	1.7383
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	11	101103422	134449982	23706	-4e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	12	20703	2661791	1707	0.0584
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	12	2664306	2730915	37	0.5628
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	12	2734949	9521823	4440	0.0066
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	12	9525137	9626236	25	0.9178
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	12	9626237	10805775	845	-0.0344
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	12	10806626	10806814	2	-1.2858
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	12	10806864	11106639	190	-0.0438
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	12	11108116	11143141	15	0.6037
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	12	11148096	11402845	132	-0.0027
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	12	11403759	11432296	28	0.644
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	12	11434653	30131407	13110	-0.0043
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	12	30131423	30134898	14	-0.886
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	12	30134932	51742120	12320	0.0039
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	12	51744516	51757485	12	0.6165
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	12	51768436	57007498	2796	0.0104
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	12	57016418	57016429	2	2.0952
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	12	57017115	132288262	49226	0.0088
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	13	17924949	19019459	565	-0.0195
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	13	19021895	19021910	2	-2.2709
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	13	19022501	24017396	3575	0.0122
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	13	24018453	24029042	5	-1.3991
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	13	24031050	36968370	9385	0.0022
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	13	36969135	36982757	17	0.6306
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	13	36986330	48429552	8017	0.0076
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	13	48431716	48434505	2	-2.3074
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	13	48435706	49821904	655	-1e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	13	49822449	49827145	4	-1.3368
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	13	49829392	56673077	3865	-0.013
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	13	56673101	56676381	5	-1.2112
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	13	56687715	64738559	4737	-0.0167
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	13	64744967	64763305	15	0.528
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	13	64763463	69665237	3158	-0.0254
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	13	69665394	69669557	4	0.9226
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	13	69669693	70094603	300	-0.021
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	13	70096107	70096223	2	-1.9777
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	13	70097382	114126499	29841	-0.0013
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	14	18072124	18452209	24	0.0248
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	14	18452344	19493212	166	0.4921
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	14	19494766	19595673	76	-0.0286
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	14	19597130	19597234	2	-1.841
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	14	19600106	20523213	687	0.0213
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	14	20524255	20524465	2	-1.6245
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	14	20525813	27161693	4382	0.0121
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	14	27162637	27257869	53	-0.303
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	14	27258011	27259538	3	0.5808
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	14	27262968	34564270	4622	0.0011
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	14	34564466	34579354	5	0.6718
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	14	34579399	34582363	7	-0.7473
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	14	34596990	39678679	3050	-0.0119
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	14	39683673	39686670	2	-2.6495
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	14	39687916	43571678	2449	-0.0282
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	14	43572967	43600205	19	-0.988
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	14	43602046	73301822	18805	-0.0024
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	14	73314111	73315360	3	-1.2112
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	14	73317163	85610346	8222	0.002
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	14	85617792	85641263	10	-1.1502
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	14	85654882	105609107	12433	0.0064
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	14	105612798	105632486	12	-2.3426
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	14	105638145	105777147	61	0.0034
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	14	105777182	105794561	13	-0.6008
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	14	105798514	105971108	81	0.059
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	14	105971132	105981934	19	0.6694
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	14	105982339	106356482	244	-0.0362
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	15	18276341	18476969	49	-0.0305
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	15	18491920	18676251	17	0.6835
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	15	18682392	19465359	223	0.0778
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	15	19466192	19819102	29	0.5124
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	15	19819838	20085795	102	-0.289
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	15	20088324	20652801	270	0.1355
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	15	20658550	20675140	6	-0.9773
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	15	20676330	20834252	34	-0.0203
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	15	20839790	21205648	15	0.5089
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	15	21205735	22220749	680	-0.0393
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	15	22220838	22269266	40	-0.5856
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	15	22269689	75077324	33011	-2e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	15	75081660	75132419	23	0.6157
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	15	75135400	99465360	16849	0.0022
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	15	99466489	99520567	46	0.3749
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	15	99523964	100286563	542	0.0513
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	16	777	14956345	11115	0.0245
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	16	14956361	14993185	44	-0.6594
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	16	14994672	22349521	3663	0.0611
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	16	22465433	22618243	73	-0.4232
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	16	22620480	32066363	5168	0.0407
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	16	32084681	32088361	4	-1.3658
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	16	32088477	32293219	21	-0.0673
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	16	32293616	32698770	76	0.3849
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	16	32702984	32756405	13	-0.3157
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	16	32756406	33149454	34	0.5065
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	16	33208395	33275436	8	-0.1809
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	16	33277265	33539331	81	-0.492
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	16	33550900	54354076	6971	0.0042
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	16	54354095	54379945	19	1.1319
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	16	54387058	85571333	23543	0.0089
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	16	85573409	85579028	4	1.0126
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	16	85592742	88815036	1560	0.1069
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	17	526	15452858	10000	0.0214
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	17	15453791	15486639	4	-1.7271
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	17	15487515	18299674	1409	0.0057
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	17	18302411	18405946	26	0.4611
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	17	18409922	18543257	32	-0.1448
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	17	18550361	18599128	10	0.5819
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	17	18601241	19857705	588	0.012
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	17	19857964	19960956	57	0.3167
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	17	19962146	31509204	6249	0.0155
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	17	31552238	31939244	68	0.3035
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	17	31939401	36676629	2480	0.0248
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	17	36676679	36686470	21	0.479
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	17	36686578	72417190	21074	0.0107
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	17	72417265	72459782	34	0.5146
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	17	72468987	72852999	238	0.0158
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	17	72854686	72883721	34	0.644
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	17	72885703	73928661	592	0.062
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	17	73931799	73961746	19	0.7771
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	17	73964379	74108895	96	0.0629
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	17	74109371	74184013	72	0.4009
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	17	74185592	78643088	2072	0.0456
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	18	1543	842874	603	0.0552
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	18	845264	850356	3	1.06
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	18	850940	33612893	20305	-0.0032
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	18	33613582	33613869	2	1.8623
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	18	33616751	36514478	1879	-0.0128
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	18	36514488	36519361	12	-0.7479
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	18	36519375	37120098	411	-0.0204
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	18	37123532	37129326	5	-1.5418
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	18	37131846	45343952	5453	0
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	18	45344882	45370369	21	0.4864
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	18	45370391	49778199	3230	-0.0065
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	18	49778840	49779150	3	-2.2788
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	18	49782366	61872559	8347	-7e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	18	61878472	61879320	12	-1.4223
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	18	61883718	63104629	820	-0.0212
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	18	63110187	63118245	21	-0.7928
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	18	63118698	76116029	9574	-0.0144
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	19	41910	19692544	8536	0.0389
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	19	19696753	19701768	3	-0.9934
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	19	19701807	19735092	18	0.5408
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	19	19735871	19976455	171	0.0585
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	19	19976793	20025347	31	0.408
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	19	20029198	40541162	8031	0.0103
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	19	40541333	40568162	31	0.4816
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	19	40568715	48394873	3909	0.025
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	19	48395344	48448077	21	-2.2662
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	19	48458499	56823625	4166	0.0281
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	19	56834164	56840009	11	-2.0675
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	19	56846717	59594197	1833	0.0602
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	19	59601193	59637658	15	0.8718
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	19	59640277	60200517	318	0.0392
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	19	60201119	60201500	2	-1.4246
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	19	60201677	60903743	306	0.0307
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	19	60903928	60934184	27	0.6182
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	19	60934251	63569257	1772	0.0145
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	19	63570038	63789666	105	0.3071
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	20	9305	217703	167	-0.0843
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	20	219037	366199	89	0.2734
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	20	366267	3759203	2550	0.0265
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	20	3759433	3802982	26	0.4278
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	20	3805183	4770732	799	0.0218
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	20	4772290	4798333	23	0.4544
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	20	4798783	8771863	3037	-0.0113
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	20	8772009	8772117	2	-1.8148
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	20	8772686	61179450	35217	0.0057
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	20	61181982	61243546	39	0.4697
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	20	61246214	62386512	438	0.1386
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	20	62425139	62426597	5	-1.7813
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	21	9758742	22573005	6447	-0.0145
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	21	22577771	22588870	10	-0.9955
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	21	22591163	39859799	12867	-0.0035
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	21	39859901	39908200	48	0.3294
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	21	39911090	44602178	3630	0.0233
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	21	44602623	44641697	18	0.3174
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	21	44651821	44663343	4	1.1476
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	21	44664596	44692780	7	0.3109
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	21	44696415	45504630	515	-0.0121
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	21	45504809	45856760	164	0.2668
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	21	45856823	46921385	634	0.0475
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	22	14432528	14435207	3	1.2623
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	22	14438854	16001327	470	0.0022
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	22	16001704	16004943	5	0.9027
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	22	16005920	18853346	1672	0.1035
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	22	18871884	18992706	3	-1.1311
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	22	19035775	19925029	699	0.1848
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	22	19925178	20038030	4	-1.2619
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	22	20038108	22493003	1630	0.0922
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	22	22495088	22506053	14	0.5595
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	22	22508279	22618367	86	0.0646
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	22	22618434	22623856	5	-1.2103
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	22	22630797	22674422	22	-0.1103
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	22	22680529	22726814	19	-2.0191
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	22	22731529	22736778	10	0.3829
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	22	22737124	24465993	1239	0.05
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	22	24468017	24469093	7	0.7357
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	22	24469172	26432970	2072	0.0232
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	22	26433259	26460130	29	0.4064
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	22	26460759	28200258	979	-0.0041
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	22	28200312	28211701	4	1.3264
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	22	28211717	34772068	4782	-0.0043
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	22	34772926	34808713	22	0.4513
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	22	34809423	36818789	1237	0.0411
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	22	36819230	36858440	15	0.6266
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	22	36859086	37693565	455	-0.0023
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	22	37693630	37701788	19	-0.5761
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	22	37701848	40647871	1579	0.0221
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	22	40649602	40683669	17	0.6571
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	22	40685606	41106870	232	0.0195
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	22	41106912	41205423	52	0.3834
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	22	41207945	47981818	5220	0.0077
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	22	47981829	47982665	3	-1.1755
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	22	47983026	49581321	911	0.1621
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	X	108477	502074	57	0.3847
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	X	522558	19378639	11726	0.0201
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	X	19382166	19427160	44	0.5486
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	X	19429296	47812780	17291	-2e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	X	47817430	47902633	46	0.3067
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	X	47903615	48010315	67	0.0076
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	X	48011263	48051248	13	0.7066
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	X	48053681	76270041	10803	0.0023
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	X	76278683	76295047	2	-1.6064
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	X	76295049	78724882	932	0.0121
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	X	78725471	78725754	2	-1.6568
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	X	78726715	153215972	42806	-0.0059
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	X	153219802	153277770	76	0.3365
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	X	153279932	154835548	543	0.0265
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	Y	2710438	3045595	151	-2.6678
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	Y	3065268	6003672	621	-2.2225
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	Y	6004603	6167901	68	-2.6492
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	Y	6170498	6387325	98	-3.6947
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	Y	6387861	8412852	1095	-2.7247
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	Y	8413707	9228140	375	-3.0529
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	Y	9230545	10001884	25	-4.4806
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	Y	10002195	10369564	155	-3.2168
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	Y	10384614	13311057	595	-2.6295
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	Y	13313471	13315400	3	-7.0039
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	Y	13319281	13534015	99	-2.7876
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	Y	13535818	13540211	5	-5.3023
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	Y	13541682	14099670	249	-2.5713
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	Y	14099736	14103917	3	-7.6945
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	Y	14104283	18080874	2077	-2.78
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	Y	18084284	19547685	704	-3.3677
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	Y	19547873	22295746	1065	-2.7888
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	Y	22296847	25725360	674	-3.3443
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	Y	25776875	26129939	93	-2.565
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	Y	26130472	26687080	195	-3.3379
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	Y	26699115	26731140	12	-4.9118
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	Y	26731407	26833326	44	-3.3175
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	Y	26847504	57427647	183	-2.5259
