Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	61735	809773	66	-0.0106
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	813032	2950370	576	0.277
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	2950396	16970456	8107	0.0183
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	17005734	17056457	39	0.6543
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	17076467	17182437	22	-0.1408
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	17190004	17277940	65	0.5836
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	17282425	22298285	3333	0.0174
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	22300465	22319001	8	0.7273
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	22320515	25583291	1916	0.0171
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	25583341	25662212	32	0.4672
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	25663310	26833859	555	0.0123
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	26836521	26861106	10	0.6781
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	26863735	40104584	7109	0.0148
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	40114624	40158828	28	0.4646
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	40160148	108766355	44101	-0.004
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	108769302	108817179	2	-2.5495
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	108828957	110227396	702	0.0092
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	110227500	110242953	20	-0.7373
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	110244998	148906617	8314	-0.0089
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	148907270	149205415	109	-0.6906
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	149205429	152555176	1561	0.0331
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	152555527	152586594	36	1.2815
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	152590494	152761939	172	-0.0148
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	152761955	152773905	36	0.4173
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	152776755	178659933	17345	-4e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	178660009	178665949	20	0.534
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	178666033	196812507	12187	-0.0043
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	196812530	196815791	2	3.7846
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	196816730	198304536	821	-2e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	198306932	198311359	3	-1.7035
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	198311466	217683348	13330	0.0029
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	217685872	217706849	17	0.5234
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	217709890	220435999	1839	-0.0016
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	220436373	220440718	5	-0.9047
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	220442369	226015116	3557	0.0053
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	226015299	226071998	33	0.4074
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	226074159	231911294	3709	0.0064
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	231911575	231966862	43	0.4294
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	231974391	242122020	7945	0.0053
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	242127992	242158852	15	0.605
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	242165458	246840434	3194	0.0106
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	246844576	246892826	28	0.6732
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	246897378	248014615	733	-0.0073
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	248018426	248060541	24	0.3831
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	248060600	248348169	172	-0.0684
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	248348194	248349215	3	-1.2548
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	248353574	248610056	156	-0.0283
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	248610507	248649577	15	-0.8919
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	248660184	248697391	14	0.1961
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	248709616	248725234	5	-1.1944
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	1	248736075	249224388	180	0.0892
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	2	12784	189818	103	0.0799
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	2	189832	216029	20	0.7232
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	2	216376	3147136	2054	0.0194
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	2	3147861	3198995	64	0.3037
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	2	3199428	7604434	3645	0.0148
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	2	7605948	7657454	42	0.3661
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	2	7657607	33081584	16883	0.0038
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	2	33083196	33107259	14	0.6024
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	2	33107350	34711474	1263	-0.0037
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	2	34716770	34737057	30	0.4513
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	2	34737163	40332851	4043	-0.0109
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	2	40335410	40336640	4	-1.1671
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	2	40338067	52754881	8970	-0.0038
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	2	52758753	52790140	35	-0.6538
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	2	52790493	87128201	21956	-2e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	2	87129203	87137385	2	-1.9034
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	2	87161853	98018864	2063	0.0456
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	2	98019683	98209427	30	-0.511
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	2	98216789	106135637	4900	0.0102
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	2	106138125	106138812	2	1.4852
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	2	106139216	106874497	648	0.01
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	2	106874649	106887408	16	0.7685
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	2	106887870	108440736	991	-0.0195
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	2	108446969	108520376	8	0.9191
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	2	108526039	110462496	1106	0.0128
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	2	110467473	110477250	2	1.5906
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	2	110501512	123477014	7427	0.0079
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	2	123479899	123482241	9	-1.8811
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	2	123483653	126154620	1767	-0.0153
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	2	126156122	126156299	2	-1.7418
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	2	126157539	146862085	12589	0.0026
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	2	146864404	146878532	31	0.6809
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	2	146878645	180287156	20351	0.0072
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	2	180287981	180297960	9	-0.9789
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	2	180301268	196186848	9290	-0.0066
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	2	196186862	196189535	6	-1.5814
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	2	196189872	208343990	7241	0.0077
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	2	208345140	208359796	33	0.4855
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	2	208360146	243089456	22093	0.0059
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	60345	963381	738	-0.1316
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	966233	1028679	47	0.3524
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	1028770	11108154	8589	-0.0194
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	11110808	11115921	3	-1.5102
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	11118659	12696888	1138	0.0106
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	12697075	12701396	12	0.5818
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	12701406	36283731	15960	-0.0111
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	36283957	36285030	3	-1.6946
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	36285279	59741862	13799	2e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	59744663	59745701	2	-1.9763
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	59746073	60516256	927	-0.0961
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	60517563	60559047	43	0.4561
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	60559252	68746164	6462	0.0035
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	68746259	68746823	7	-1.2335
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	68746840	75364480	4839	0.0035
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	75366984	75367093	2	-2.239
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	75369704	75568549	90	0.1211
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	75572549	75586805	6	-1.5844
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	75595181	85492783	5472	-0.0055
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	85497678	85605071	63	-0.2759
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	85605813	103076818	7802	-0.008
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	103079502	103091271	9	-1.0865
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	103097120	129785940	16387	4e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	129786209	129843474	64	0.3388
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	129843548	131706696	1153	-0.0047
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	131708157	131718213	5	-0.9242
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	131723626	136019099	2850	0.0033
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	136022951	136025426	2	-2.2671
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	136038541	158204696	13522	-0.0038
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	158209485	158212828	5	-0.9946
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	158222838	162513149	2681	-0.0151
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	162513459	162615915	60	-1.1165
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	162623842	162681813	54	-0.1347
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	162681971	162681979	2	-2.2378
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	162682265	174721894	7283	-0.0072
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	174730258	174740589	14	-0.3766
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	174741583	174945912	162	0.0332
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	174945927	174945947	2	1.7758
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	174946010	189360754	9126	0.0067
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	189363678	189370988	12	-2.5429
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	189371014	190595781	907	0.0193
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	190596748	190596952	2	-1.4362
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	190618661	192596397	1373	-0.0025
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	192602613	192608551	19	0.481
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	192608598	192880587	199	-0.0254
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	192880726	192882903	11	-0.9758
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	192886435	195412212	1484	0.011
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	195418263	195455861	24	0.7728
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	195455876	196510892	491	0.0587
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	196511029	196556141	20	0.6495
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	196566056	196662154	46	0.0833
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	196662275	196749408	50	0.3383
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	196751918	197869571	579	0.0159
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	3	197895985	197896118	4	1.0669
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	4	12281	89609	81	-0.2411
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	4	89731	7431266	4222	0.0181
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	4	7431468	7467316	39	0.5133
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	4	7470038	10209963	1446	0.0183
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	4	10210113	10235182	39	0.4461
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	4	10235268	10392354	172	0.0025
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	4	10393154	10400668	15	-0.9529
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	4	10402718	26184827	11476	0.0012
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	4	26187028	26259951	41	0.294
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	4	26264712	32466129	3960	0.004
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	4	32467188	32537063	43	-0.4494
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	4	32539177	34788021	1260	-0.0051
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	4	34790516	34829949	36	0.3893
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	4	34830004	53674000	9506	-0.0034
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	4	53674819	53675549	3	-1.2259
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	4	53676641	57544502	2668	0.0044
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	4	57544766	57545031	2	1.6339
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	4	57548283	69372003	7270	-0.0125
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	4	69374941	69485840	63	-1.341
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	4	69485979	132110349	37708	-0.0073
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	4	132113910	132116267	2	0.7501
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	4	132116621	149486629	10337	-0.0068
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	4	149493193	149493212	2	-1.9854
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	4	149494154	152789786	1743	0.0024
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	4	152791533	152792567	12	-1.1021
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	4	152792891	161874000	5855	0.0025
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	4	161880018	161884908	21	-1.8752
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	4	161884919	172369346	6669	-0.0106
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	4	172374884	172377444	8	-1.0034
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	4	172377458	185602027	8865	-0.013
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	4	185603335	185603490	2	1.702
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	4	185608574	189436915	2678	0.0126
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	4	189437086	189437410	8	-0.8518
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	4	189439872	191027923	958	-0.0377
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	5	15532	698472	309	0.1151
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	5	698505	773190	25	-0.9712
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	5	773547	5806875	4222	0.0189
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	5	5807278	5809068	4	-1.1781
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	5	5810732	8701366	2391	0.0026
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	5	8701920	8743744	45	-0.2962
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	5	8746981	9351052	537	0.0174
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	5	9351349	9370882	31	0.4957
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	5	9370945	15723485	4640	1e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	5	15729327	15730060	4	-1.3492
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	5	15732283	21449276	3540	-0.0183
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	5	21451200	21451998	4	-1.9061
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	5	21452438	34259509	7965	-0.0107
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	5	34264347	34266577	5	-1.0438
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	5	34266680	50830769	7726	-0.0071
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	5	50832390	50863262	13	-0.5967
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	5	50865687	78435908	16850	-0.0051
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	5	78436189	78485942	25	0.4027
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	5	78491957	86111756	4446	-0.0095
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	5	86115378	86121629	4	-1.3243
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	5	86122767	124619190	24011	-0.0121
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	5	124620769	124622028	3	-1.6181
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	5	124622296	146982944	13461	-0.0047
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	5	146985777	146995609	3	-1.3501
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	5	146999320	160539759	9304	-0.0014
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	5	160541188	160546792	10	-1.2459
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	5	160547661	174138706	9667	0.01
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	5	174138836	174201046	29	0.509
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	5	174201170	175372411	857	-9e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	5	175373508	175431575	10	0.8151
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	5	175432605	175460087	4	-0.624
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	5	175465689	176049708	241	0.0089
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	5	176050511	176050715	2	-0.5828
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	5	176053229	177167963	484	0.0874
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	5	177197955	177254965	6	0.9483
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	5	177259415	179104600	1085	0.0179
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	5	179105007	179105152	4	0.9475
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	5	179105267	180372168	716	0.0143
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	5	180374484	180417207	17	-0.6401
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	5	180417614	180790320	175	0.1408
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	6	149661	799902	549	-0.0528
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	6	800051	867007	58	0.371
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	6	867030	9201500	6783	0.0078
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	6	9202617	9260126	10	-0.5828
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	6	9264961	24222596	11146	0.0065
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	6	24222699	24253739	21	0.4645
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	6	24256552	24322037	37	0.0183
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	6	24325809	24326285	2	-1.5269
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	6	24328706	25052651	521	-0.0025
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	6	25056769	25082699	27	0.3654
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	6	25082840	26737032	1075	-0.0047
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	6	26737438	26766440	23	-0.45
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	6	26768569	29096033	1034	0.0129
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	6	29098369	29161435	8	-6.9579
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	6	29162840	29874808	417	-0.0215
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	6	29876959	29898897	8	-6.2579
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	6	29899677	29901576	5	-1.0851
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	6	29908469	53501758	14576	0.0052
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	6	53502638	53503459	3	-1.7338
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	6	53503693	53931151	359	-0.0204
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	6	53931230	53931855	6	-1.4727
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	6	53935348	66394090	5048	-0.0191
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	6	66399482	66403852	24	-0.6675
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	6	66407127	67206939	571	-0.0097
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	6	67207558	67223296	12	-0.6167
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	6	67224602	81277987	9170	-0.0102
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	6	81284189	81289534	33	-1.1129
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	6	81294341	101169450	12482	-0.016
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	6	101174555	101179399	7	-0.7843
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	6	101184583	102698749	910	-0.0084
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	6	102698993	102705227	4	-1.78
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	6	102706463	103734829	595	-0.024
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	6	103737976	103762061	46	-0.8164
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	6	103765470	154511498	32624	-0.0025
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	6	154511534	154513889	3	-1.4199
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	6	154515117	171051005	11501	0.0131
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	43355	148300	91	0.1416
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	155066	158626	10	-2.2767
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	161442	5917184	2958	0.0416
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	5919040	5919110	2	1.5456
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	5923738	6125381	76	0.0187
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	6128455	6136863	7	0.6725
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	6145638	13211263	5430	-0.0311
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	13218051	13255407	35	0.3729
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	13256498	52707609	28644	-0.0055
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	52709838	52710175	4	-1.0566
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	52710307	54380373	1221	-0.0316
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	54386505	54386517	6	0.983
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	54393488	70329434	6235	0.0177
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	70335413	70361637	19	0.5982
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	70362591	71547631	805	0.0122
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	71548311	71585736	22	0.6062
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	71587247	76240677	1423	0.0234
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	76261490	76274660	6	0.917
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	76274710	88545000	7949	-0.0155
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	88545054	88547142	2	-1.7146
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	88547458	91029468	1669	-0.0645
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	91031342	91040727	27	-0.6727
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	91046993	97395460	3966	-0.0032
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	97395462	97395506	6	0.9754
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	97395509	97782821	206	0.0326
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	97786779	97791597	3	-1.6078
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	97793209	109433798	6424	0.0041
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	109437092	109437774	16	0.6656
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	109440917	120522483	6606	-0.0075
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	120524574	120559703	17	-0.5009
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	120559913	125577506	3086	0.0029
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	125579756	125606529	25	-0.3734
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	125610841	126044974	303	0.0077
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	126045482	126046615	12	1.2678
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	126046876	133778652	4699	-0.0064
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	133785177	133808792	40	0.3868
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	133815391	141770532	5196	-0.0064
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	141770627	141782969	9	-1.0362
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	141784184	142474939	471	0.0185
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	142476719	142486045	27	-1.9685
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	142486115	143408430	502	0.0017
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	143425378	143511415	48	0.4449
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	143513741	143873952	288	-0.0464
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	143896252	144003667	28	0.5272
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	144003746	154389895	6450	-0.0055
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	154393171	154399613	4	-1.8061
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	154400830	158474261	2800	0.0112
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	158474325	158474373	2	-1.415
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	7	158474403	159127004	432	0.051
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	8	31254	3164485	2593	0.0076
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	8	3169351	3170084	4	-1.3867
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	8	3170594	5574358	3453	-0.0259
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	8	5576469	5576670	5	0.9949
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	8	5576744	12232281	5231	0.022
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	8	12232416	12311638	58	0.6403
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	8	12321897	16919086	4110	-0.0193
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	8	16919124	16919668	2	-2.3154
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	8	16924697	24972187	6331	0.0039
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	8	24974443	24984250	26	0.6298
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	8	24984333	50905210	13573	0.0036
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	8	50906486	50937906	21	-0.5621
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	8	50938203	107065467	34240	-0.0042
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	8	107066148	107205306	84	-0.284
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	8	107207156	109831807	1760	-0.0076
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	8	109838698	109957068	57	-0.2966
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	8	109957773	112294294	1279	-0.0099
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	8	112294466	112295260	8	1.3976
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	8	112300281	115634667	1828	-0.0136
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	8	115634707	115662781	36	-0.4859
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	8	115665386	143006342	19810	0.0039
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	8	143006553	143008124	2	-1.5482
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	8	143008554	145219840	849	0.0729
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	8	145223191	145919126	170	0.3578
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	8	145919718	146298155	192	0.0372
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	9	46587	22481286	19820	-0.0108
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	9	22481753	22509340	14	-0.6505
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	9	22509658	23091710	391	-0.0093
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	9	23091724	23099502	7	-0.5533
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	9	23111314	23361805	178	0.0032
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	9	23363115	23373484	8	-1.8382
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	9	23378488	28164645	3642	-0.017
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	9	28164681	28209903	46	0.3318
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	9	28213049	37502109	6047	-0.0173
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	9	37504703	37514032	15	0.6373
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	9	37515711	45448944	1308	0.003
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	9	45471390	45706444	13	-0.7412
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	9	45723034	68183981	105	-0.0152
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	9	68186051	68186057	4	1.5518
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	9	68186059	129617165	42019	-7e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	9	129617421	129659952	23	0.6323
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	9	129662640	138218863	4972	0.0187
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	9	138219151	138219333	2	1.5203
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	9	138219716	140228175	672	0.0683
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	9	140228192	140255642	17	0.685
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	9	140255718	141091394	414	0.0498
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	10	72759	499188	235	-0.0348
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	10	499353	552408	48	0.5476
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	10	556129	48771950	31898	0.0074
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	10	48837810	48840627	2	4.0702
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	10	48883402	58247403	6150	-0.0183
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	10	58248669	58252122	5	-0.9102
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	10	58254610	67308030	6317	-0.0017
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	10	67308591	67322795	24	0.592
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	10	67322926	67781998	399	0.0157
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	10	67784429	67785037	2	-1.5365
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	10	67785177	80240206	7955	1e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	10	80240489	80244598	3	-1.9141
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	10	80244623	80629352	369	0.0184
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	10	80631334	80631509	2	-1.5504
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	10	80632998	81462017	501	0.0166
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	10	81497471	81657418	37	-0.4493
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	10	81665885	102062650	13570	-2e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	10	102062892	102094594	27	0.4669
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	10	102103414	118283912	10770	-0.0015
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	10	118286538	118286605	2	-3.0504
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	10	118287154	118474186	130	0.0124
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	10	118474319	118504307	19	0.4774
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	10	118506755	135506704	12398	0.0156
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	11	198510	440343	98	0.2558
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	11	445389	4269264	1697	0.0134
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	11	4272420	4319713	14	-1.6746
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	11	4319714	4359288	10	-0.4642
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	11	4384797	4962632	634	-0.0051
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	11	4962752	4963419	3	-0.8479
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	11	4963432	6138797	1129	-0.0162
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	11	6144189	6164628	13	-0.8975
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	11	6164700	6917808	540	0.0086
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	11	6918113	6920773	7	-0.7324
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	11	6920892	12944507	4602	0.0074
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	11	12945058	12945217	2	-2.1998
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	11	12945249	12946203	4	-0.7167
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	11	12946702	15189409	1463	-0.0046
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	11	15189510	15195799	4	0.9627
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	11	15195816	18940870	2509	-0.0043
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	11	18949072	18961988	56	-1.0192
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	11	18962016	26763702	6201	-0.0093
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	11	26766550	26770926	8	-0.6852
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	11	26770983	27909691	753	-0.0204
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	11	27909840	27917395	3	-1.5823
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	11	27917716	55376280	14833	-0.0085
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	11	55376498	55453009	51	-0.4864
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	11	55453576	65258917	5362	0.006
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	11	65270915	65344328	25	0.7135
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	11	65347355	81503468	9195	0.0075
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	11	81503992	81515327	6	-1.6479
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	11	81515696	81517158	4	-5.6643
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	11	81522632	86305817	3172	-0.0147
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	11	86305875	86306054	3	-2.3975
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	11	86315174	88392662	1469	-0.0147
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	11	88393840	88396950	6	-0.9205
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	11	88398458	89543752	648	-0.0142
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	11	89546927	89580352	6	1.1228
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	11	89602573	101594384	8683	-0.0057
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	11	101597860	101597964	4	1.7383
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	11	101598212	134944770	23702	-5e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	12	150442	2791530	1707	0.0584
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	12	2794045	2860654	37	0.5628
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	12	2864688	9630556	4439	0.0067
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	12	9633870	9734969	26	0.916
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	12	9734970	10914508	844	-0.0345
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	12	10915359	10915547	2	-1.2858
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	12	10915597	11215372	190	-0.0438
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	12	11216849	11251874	15	0.6037
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	12	11256829	11511578	132	-0.0027
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	12	11512492	11541029	28	0.644
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	12	11543386	30240140	13108	-0.0043
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	12	30240156	30243631	14	-0.886
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	12	30243665	53455853	12318	0.0038
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	12	53458249	53471218	12	0.6165
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	12	53482169	58721231	2795	0.0104
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	12	58730151	58730162	2	2.0952
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	12	58730848	133778189	49224	0.0088
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	13	19026949	20121459	565	-0.0195
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	13	20123895	20123910	2	-2.2709
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	13	20124501	25119396	3575	0.0122
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	13	25120453	25131042	5	-1.3991
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	13	25133050	38070370	9383	0.0023
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	13	38071135	38084757	17	0.6306
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	13	38088330	49531551	8017	0.0076
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	13	49533715	49536504	2	-2.3074
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	13	49537705	57775076	4524	-0.0123
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	13	57775100	57778380	5	-1.2112
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	13	57789714	65840558	4736	-0.0168
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	13	65846966	65865304	15	0.528
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	13	65865462	70767236	3158	-0.0254
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	13	70767393	70771556	4	0.9226
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	13	70771692	71196602	300	-0.021
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	13	71198106	71198222	2	-1.9777
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	13	71199381	115108397	29840	-0.0013
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	14	19002124	19382209	24	0.0248
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	14	19382344	20423372	166	0.4921
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	14	20424926	20525833	76	-0.0286
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	14	20527290	20527394	2	-1.841
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	14	20530266	21453373	687	0.0213
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	14	21454415	21454625	2	-1.6245
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	14	21455973	28091853	4382	0.0121
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	14	28092797	28188029	53	-0.303
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	14	28188171	28189698	3	0.5808
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	14	28193128	35494519	4621	0.0012
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	14	35494715	35509603	5	0.6718
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	14	35509648	35512612	7	-0.7473
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	14	35527239	40608928	3049	-0.0117
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	14	40613922	40616919	2	-2.6495
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	14	40618165	44501928	2449	-0.0279
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	14	44503217	44530455	19	-0.988
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	14	44532296	74232069	18803	-0.0024
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	14	74244358	74245607	3	-1.2112
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	14	74247410	86540593	8223	0.0019
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	14	86548039	86571510	10	-1.1502
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	14	86585129	106538062	12433	0.0064
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	14	106541753	106561441	12	-2.3426
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	14	106567100	106706102	61	0.0034
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	14	106706137	106723516	13	-0.6008
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	14	106727469	106900063	81	0.059
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	14	106900087	106910889	19	0.6694
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	14	106911294	107285437	244	-0.0362
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	15	20016328	20216955	49	-0.0305
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	15	20231906	20416237	17	0.6835
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	15	20422378	21200700	209	0.0655
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	15	21201533	21909391	20	0.7826
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	15	21909901	22317738	23	0.1241
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	15	22318474	22584431	102	-0.289
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	15	22586960	23101360	270	0.1355
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	15	23107109	23123699	6	-0.9773
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	15	23124889	23282811	34	-0.0203
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	15	23288349	23654207	15	0.5089
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	15	23654294	24669656	680	-0.0393
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	15	24669745	24718173	40	-0.5856
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	15	24718596	77290269	33009	-2e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	15	77294605	77345364	23	0.6157
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	15	77348345	101647837	16848	0.0022
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	15	101648966	101703044	46	0.3749
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	15	101706441	102469040	542	0.0513
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	16	60777	15048844	11114	0.0245
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	16	15048860	15085684	44	-0.6594
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	16	15087171	22442020	3663	0.0611
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	16	22557932	22710742	73	-0.4232
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	16	22712979	22813959	94	0.061
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	16	22814720	22843941	23	0.4038
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	16	22847767	32158862	5050	0.0385
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	16	32177180	32180860	4	-1.3658
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	16	32180976	32385718	21	-0.0673
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	16	32386115	32791269	76	0.3849
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	16	32795483	32848904	13	-0.3157
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	16	32848905	33241953	34	0.5065
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	16	33300894	33367935	8	-0.1809
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	16	33369764	33484562	25	-0.5137
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	16	33484574	33504160	10	0.1014
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	16	33526620	33631830	46	-0.6092
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	16	33643399	55796575	6971	0.0042
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	16	55796594	55822444	19	1.1319
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	16	55829557	87013832	23461	0.0091
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	16	87015908	87021527	4	1.0126
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	16	87035241	90287535	1563	0.1075
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	17	526	15512133	10001	0.0215
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	17	15513066	15545914	4	-1.7271
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	17	15546790	18358949	1409	0.0057
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	17	18361686	18465221	26	0.4611
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	17	18469197	18602532	32	-0.1448
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	17	18609636	18658403	10	0.5819
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	17	18660516	19917113	588	0.012
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	17	19917372	20020364	57	0.3167
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	17	20021554	34485091	6249	0.0155
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	17	34528125	34865131	68	0.3035
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	17	34865288	39423103	2478	0.0248
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	17	39423153	39432944	21	0.479
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	17	39433052	74905595	21075	0.0106
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	17	74905670	74948187	34	0.5146
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	17	74957392	75341404	238	0.0158
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	17	75343091	75372126	34	0.644
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	17	75374108	76417066	592	0.062
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	17	76420204	76450151	19	0.7771
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	17	76452784	76597300	96	0.0629
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	17	76597776	76672418	72	0.4009
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	17	76673997	81049726	2072	0.0456
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	18	11543	852874	603	0.0552
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	18	855264	860356	3	1.06
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	18	860940	35358895	20304	-0.0031
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	18	35359584	35359871	2	1.8623
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	18	35362753	38260480	1879	-0.0128
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	18	38260490	38265363	12	-0.7479
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	18	38265377	38866100	411	-0.0204
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	18	38869534	38875328	5	-1.5418
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	18	38877848	47089954	5453	0
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	18	47090884	47116371	21	0.4864
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	18	47116393	51524201	3229	-0.0062
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	18	51524842	51525152	3	-2.2788
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	18	51528368	63721579	8346	-6e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	18	63727492	63728340	12	-1.4223
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	18	63732738	64953649	820	-0.0212
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	18	64959207	64967265	21	-0.7928
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	18	64967718	78015057	9574	-0.0144
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	19	90910	19831544	8535	0.039
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	19	19835753	19840768	3	-0.9934
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	19	19840807	19874092	18	0.5408
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	19	19874871	20115455	171	0.0585
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	19	20115793	20164347	31	0.408
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	19	20168198	35849322	8031	0.0103
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	19	35849493	35876322	31	0.4816
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	19	35876875	43703033	3909	0.025
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	19	43703504	43756237	21	-2.2662
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	19	43766659	52131813	4166	0.0281
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	19	52142352	52148197	11	-2.0675
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	19	52154905	54902385	1833	0.0602
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	19	54909381	54945846	15	0.8718
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	19	54948465	55508705	318	0.0392
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	19	55509307	55509688	2	-1.4246
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	19	55509865	56211931	306	0.0307
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	19	56212116	56242372	27	0.6182
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	19	56242439	58877445	1772	0.0145
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	19	58878226	59097854	105	0.3071
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	20	61305	269703	167	-0.0843
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	20	271037	418199	89	0.2734
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	20	418267	3811203	2552	0.0265
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	20	3811433	3854982	26	0.4278
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	20	3857183	4822732	799	0.0218
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	20	4824290	4850333	23	0.4544
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	20	4850783	8823863	3037	-0.0113
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	20	8824009	8824117	2	-1.8148
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	20	8824686	61709005	35218	0.0057
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	20	61711537	61773101	39	0.4697
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	20	61775769	62916068	438	0.1386
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	20	62954695	62956153	5	-1.7813
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	21	10736871	23651134	6447	-0.0145
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	21	23655900	23666999	10	-0.9955
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	21	23669292	40937929	12868	-0.0035
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	21	40938031	40986330	48	0.3294
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	21	40989220	45777750	3629	0.0233
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	21	45778195	45817269	18	0.3174
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	21	45827393	45838915	4	1.1476
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	21	45840168	45868352	7	0.3109
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	21	45871987	46680202	515	-0.0121
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	21	46680381	47032332	164	0.2668
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	21	47032395	48096957	633	0.0477
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	22	16052528	16055207	3	1.2623
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	22	16058854	17621327	470	0.0022
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	22	17621704	17624943	5	0.9027
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	22	17625920	20473346	1672	0.1035
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	22	20491884	20662706	3	-1.1311
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	22	20705775	21595029	699	0.1848
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	22	21595178	21708030	4	-1.2619
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	22	21708108	24163003	1630	0.0922
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	22	24165088	24176053	14	0.5595
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	22	24178279	24288367	86	0.0646
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	22	24288434	24293856	5	-1.2103
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	22	24300797	24344422	22	-0.1103
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	22	24350529	24396814	19	-2.0191
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	22	24401529	26135993	1249	0.0527
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	22	26138017	26139093	7	0.7357
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	22	26139172	28102970	2072	0.0232
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	22	28103259	28130130	29	0.4064
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	22	28130759	29870258	979	-0.0041
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	22	29870312	29881701	4	1.3264
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	22	29881717	36442122	4781	-0.0043
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	22	36442980	36478767	22	0.4513
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	22	36479477	38488843	1237	0.0411
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	22	38489284	38528494	15	0.6266
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	22	38529140	39363619	455	-0.0023
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	22	39363684	39371842	19	-0.5761
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	22	39371902	42317925	1579	0.0221
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	22	42319656	42353723	17	0.6571
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	22	42355660	42776926	232	0.0195
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	22	42776968	42875479	52	0.3834
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	22	42878001	49595814	5220	0.0077
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	22	49595825	49596661	3	-1.1755
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	22	49597022	51181236	895	0.1656
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	22	51183853	51234455	17	-0.0913
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	X	168477	582074	57	0.3847
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	X	602558	19468718	11727	0.0202
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	X	19472245	19517239	44	0.5486
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	X	19519375	47927836	17292	-2e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	X	47932486	48017689	46	0.3067
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	X	48018671	48125371	67	0.0076
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	X	48126319	48166304	13	0.7066
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	X	48168737	153562778	54530	-0.0036
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	X	153566608	153624576	76	0.3365
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	X	153626738	155182354	544	0.0262
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	Y	2650438	2905717	126	-2.678
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	Y	2905996	5944602	678	-2.1734
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	Y	5944603	6107901	68	-2.6492
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	Y	6110498	6327325	98	-3.6947
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	Y	6327861	8352852	1102	-2.714
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	Y	8353707	9168140	375	-3.0529
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	Y	9170545	9391884	25	-4.4806
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	Y	9392195	9526990	62	-2.7183
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	Y	9531709	9633865	40	-3.9566
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	Y	9648550	9759564	53	-3.2416
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	Y	9774614	14801663	595	-2.6295
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	Y	14804077	14806006	3	-7.0039
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	Y	14809887	15024621	99	-2.7876
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	Y	15026424	15030817	5	-5.3023
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	Y	15032288	15590276	249	-2.5713
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	Y	15590342	15594523	3	-7.6945
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	Y	15594889	19571480	2081	-2.7763
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	Y	19574890	21088297	704	-3.3677
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	Y	21088485	24525360	1249	-2.8305
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	Y	24528056	26218232	317	-3.4875
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	Y	26222820	26630929	90	-2.8348
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	Y	26631228	27315972	84	-3.9214
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	Y	27367487	27720551	93	-2.565
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	Y	27721084	28277692	195	-3.3379
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	Y	28289727	28321752	12	-4.9118
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	Y	28322019	28423938	44	-3.3175
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B12_1362240	Y	28438116	59018259	183	-2.5259
