Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	1	3208470	52118653	25644	0.0717
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	1	52120937	52121357	4	-2.1437
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	1	52121441	120328884	41927	0.0355
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	1	142745296	156780835	4326	0.3982
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	1	156780850	156816704	11	-0.2693
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	1	156817057	184721777	18263	0.3849
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	1	184722746	184722959	2	-1.0374
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	1	184724887	238098745	34123	0.3767
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	1	238100874	238343670	198	0.0263
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	1	238345032	245880329	4222	0.3538
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	2	474222	242124735	131014	0.205
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	3	526235	102316595	54369	-0.4884
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	3	102316981	116719791	8019	-0.7714
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	3	116722097	116722337	2	-3.8264
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	3	116724643	131229846	8465	-0.7813
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	3	131354225	131359673	2	0.7263
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	3	131368258	144146721	7227	-0.1349
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	3	144146968	144147202	2	-1.737
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	3	144147509	146800968	1400	-0.169
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	3	146801439	158606051	6173	0.2766
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	3	158608522	158608643	3	-1.246
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	3	158609984	168595899	4603	0.2626
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	3	168597665	168597791	2	-2.2019
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	3	168599837	176561020	4445	0.2929
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	3	176561174	178860247	784	0.5973
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	3	178871803	199023074	10469	0.2917
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	4	1043934	47763540	28091	0.6498
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	4	47763583	95376536	23760	0.3182
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	4	95381983	96904687	980	-0.4648
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	4	96913238	113002799	8908	0.3115
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	4	113004795	113006872	2	-1.2624
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	4	113012719	137739253	12911	0.3149
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	4	137744278	137744431	2	-1.4974
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	4	137745317	156955469	10992	0.3306
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	4	156956835	156959554	3	-0.8749
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	4	156959921	189836143	16827	0.3197
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	5	967233	45414213	25881	0.4047
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	5	50160613	68354398	10901	0.0584
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	5	68355443	68356524	3	-1.4372
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	5	68356942	119912472	27085	0.0394
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	5	119912891	119913247	2	-1.8821
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	5	119913828	179671045	36153	0.0485
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	5	179675800	179676243	3	-2.2964
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	5	179676615	180293075	219	0.0318
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	6	959281	79427930	43202	-0.1372
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	6	79430774	79431444	2	-1.6166
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	6	79431895	108063705	15836	0.0334
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	6	108064100	108064209	2	-1.368
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	6	108066545	115874804	4602	0.0549
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	6	115882520	115884314	2	-2.1053
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	6	115885416	170745844	32562	0.0471
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	7	671810	57221738	33280	0.1907
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	7	57226131	57923674	15	-0.352
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	7	57925646	158077879	47839	0.1817
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	8	607667	62861483	33359	-0.1217
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	8	62862636	63036357	111	-0.4031
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	8	63039323	70042740	3829	-0.1335
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	8	70046521	70056367	2	-1.7429
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	8	70057108	145304484	43984	-0.1237
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	9	779932	2850773	1414	-0.2063
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	9	2852016	3088796	245	-2.1663
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	9	3088899	21545226	11565	-0.2159
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	9	21552757	21967194	218	-1.9014
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	9	21968443	140058573	54349	-0.2154
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	10	405240	114843549	67430	-0.3008
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	10	114845007	114845387	2	-1.9428
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	10	114848067	135075077	13191	-0.2389
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	11	446120	12286497	7011	0.2019
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	11	12293888	12293899	2	-2.379
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	11	12295385	27993882	10711	0.1888
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	11	27995767	68420080	18160	-0.1603
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	11	68423556	68815327	261	2.6021
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	11	68824459	71004601	1318	2.0844
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	11	71012031	72111568	436	1.2605
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	11	72112603	72143200	11	0.8394
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	11	72147435	97734488	15239	-0.2404
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	11	97814512	98250290	293	-0.8106
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	11	98251132	119281021	13644	-0.238
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	11	119287266	119289212	2	-1.7434
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	11	119289343	125913763	4701	-0.2322
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	11	125913814	125916260	2	-1.8436
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	11	125917857	133647740	5235	-0.2505
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	12	760163	33412374	19513	0.7242
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	12	36946731	131671419	54262	-0.095
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	13	18348806	27178865	4891	-0.1962
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	13	27180256	27864067	486	-0.4976
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	13	27866468	42921336	10057	-0.1995
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	13	42922779	42993482	51	-0.5011
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	13	42993877	85786700	23305	-0.2217
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	13	85796287	85833450	25	-0.8043
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	13	85839283	114005560	17662	-0.2081
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	14	19571208	105059083	49255	-0.4624
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	15	21238778	99701830	44403	0.0218
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	16	593460	5969563	2259	-0.0148
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	16	5970334	5976359	2	-1.8457
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	16	5976371	69396838	26489	-0.0271
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	16	69403572	69757550	65	0.4205
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	16	69762695	87907437	11937	-0.0219
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	17	933971	78510305	36871	-0.1288
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	18	319586	22172742	11216	-0.4047
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	18	22173037	22612517	309	-1.2175
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	18	22613927	75210228	31000	-0.4284
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	19	235018	3063004	640	-0.7025
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	19	3063023	3074113	4	-4.9217
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	19	3074169	16452464	5587	-0.6903
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	19	16455039	19807091	1382	0.1354
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	19	21040147	23844832	1316	-0.7532
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	19	32932334	63570038	14945	0.2245
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	20	403764	15780299	9530	0.4122
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	20	15781245	61690281	27668	0.7156
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	21	14269492	46503202	20522	0.188
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	22	15803930	47717016	16867	-0.4173
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	X	3167107	9604700	1546	-0.2456
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	X	9605117	9611839	4	-2.1116
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	X	9612204	49339263	19020	-0.2272
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	X	49342292	50532328	521	0.1015
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	X	50532433	50534041	2	-2.2209
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_A09_1362280	X	50534287	154558783	42424	0.112
