Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	1	3208470	32413591	15349	0.383
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	1	32420437	61124555	16493	0.0348
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	1	61127931	142745296	35718	-0.4047
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	1	145143007	160757790	6776	0.3927
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	1	160757933	161579886	657	0.0316
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	1	161580163	168438170	5169	0.4458
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	1	168438419	238426742	44396	0.1191
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	1	238432963	238433001	2	-1.0708
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	1	238433062	240360742	1384	0.1589
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	1	240362270	245880329	2762	0.5179
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	2	474222	9242584	5268	0.0192
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	2	9245644	9290701	31	-0.4362
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	2	9293513	48319131	23312	0.0457
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	2	48322289	48438330	49	-0.4393
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	2	48439467	68191615	11045	0.0448
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	2	68191917	68192930	2	-1.8534
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	2	68195296	82193454	7570	0.0439
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	2	82193665	82240109	38	-0.4593
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	2	82241881	101848862	5994	0.0421
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	2	101854294	101942049	48	-0.4368
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	2	101943992	242124735	77655	-0.0818
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	3	526235	70666331	40234	-0.417
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	3	70666467	70667250	2	-2.5986
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	3	70674905	82189003	6647	-0.424
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	3	82199464	85883168	1657	0.3747
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	3	85883735	86757127	475	0.0337
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	3	86759242	86760408	4	-1.2766
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	3	86762229	113013804	11270	0.0518
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	3	113014761	113117809	81	-0.4081
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	3	113118093	129337783	9692	0.0423
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	3	129345038	152917638	12590	0.3929
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	3	152921492	152921492	2	-1.406
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	3	152922496	179405906	13248	0.3967
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	3	179410668	179411172	2	-1.7315
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	3	179411211	199023074	10151	0.397
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	4	1043934	22324128	13456	-0.1777
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	4	22324162	22469155	79	-0.4461
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	4	22629498	167678225	78083	-0.1636
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	4	167685166	167685596	3	-1.4999
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	4	167685865	189836143	10847	-0.1651
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	5	967233	37290216	21405	0.6614
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	5	37290520	37294917	3	-0.7031
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	5	37300044	52924420	6122	0.6842
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	5	52926690	52948733	12	1.2509
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	5	52951858	88870779	19821	0.0448
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	5	88874059	89358440	222	-0.3969
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	5	89359835	168218879	45782	0.0427
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	5	168219168	168220674	2	-1.7952
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	5	168221570	180293075	6882	0.0264
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	6	959281	55435586	32778	0.0485
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	6	55436552	55440504	2	-2.3344
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	6	55441374	83547394	12612	0.045
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	6	83550092	83550112	2	-2.001
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	6	83550704	144673650	35245	0.0462
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	6	144676026	144740424	43	-0.3773
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	6	144740655	148543637	2412	0.0411
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	6	148548305	148548637	2	-1.6178
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	6	148548948	151168243	1767	0.045
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	6	151172384	151172774	2	1.5703
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	6	151174954	170745844	11365	0.0287
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	7	671810	62758473	33305	0.1879
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	7	62770561	94826916	14801	-0.1354
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	7	94830020	94929980	58	-0.6118
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	7	94935939	118372428	11933	-0.128
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	7	118404447	118558315	83	-0.6968
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	7	118570559	150356655	17047	-0.136
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	7	150357835	151018130	360	0.2575
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	7	151018897	158077879	3542	-0.1608
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	8	607667	61286201	32313	-0.0757
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	8	61286506	61313704	22	0.4516
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	8	61314128	73295504	6984	0.0653
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	8	73295900	73296957	2	-1.4574
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	8	73299039	76729523	2107	0.0816
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	8	76731698	76732397	2	-2.5425
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	8	76732726	86703101	5309	0.0711
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	8	86910248	86930835	43	0.6562
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	8	86932453	90376886	1858	0.0663
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	8	90377773	90468076	90	-0.9169
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	8	90473708	90557666	32	-0.3659
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	8	90564150	90863557	149	0.0979
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	8	90863900	90876905	10	-0.8798
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	8	90877286	98066742	4299	0.0722
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	8	98069141	98219487	61	-0.426
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	8	98220143	110990078	7050	0.0778
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	8	110998735	116174649	2536	0.6858
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	8	116174796	116437966	165	1.1437
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	8	116439752	145304484	18249	0.6833
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	9	779932	8889205	5041	-0.1768
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	9	8889449	9486439	269	-0.4682
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	9	9487040	16831628	4258	-0.1598
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	9	16831763	16833773	2	-1.6817
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	9	16837804	21966870	3871	-0.1578
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	9	21967194	22087933	105	-0.9677
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	9	22088574	23663382	1022	-0.1627
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	9	23666631	23669042	3	-2.8144
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	9	23669627	105193084	31702	-0.1697
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	9	105194245	105195094	2	-2.4153
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	9	105199169	119298898	9904	-0.1608
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	9	119300273	119300941	3	-2.0749
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	9	119303535	140058573	11620	-0.1689
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	10	405240	42275999	26062	-0.1726
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	10	42276475	135075077	54593	0.1555
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	11	446120	133647740	77045	0.0101
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	12	760163	15173239	8096	-0.1638
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	12	15173739	15314849	85	0.2609
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	12	15322104	51844579	19065	-0.1519
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	12	51868776	52258082	182	-0.6541
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	12	52263335	131671419	46347	-0.1608
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	13	18348806	27130706	4842	-0.4278
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	13	27131524	31388930	3016	0.2072
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	13	31399940	31623611	140	-1.1272
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	13	31625519	85507219	30657	0.1843
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	13	85510920	85511389	2	-1.6001
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	13	85511920	89842275	2350	0.1758
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	13	89842546	89842981	2	-1.3349
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	13	89845348	97902894	5188	0.1858
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	13	97903893	98010507	77	-0.4579
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	13	98017098	114005560	10212	0.1827
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	14	19571208	66460252	25797	0.0423
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	14	66461831	66662038	71	-0.3095
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	14	66665097	105059083	23438	0.0406
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	15	21238778	74635357	29905	0.0434
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	15	74638015	74921194	107	-0.3417
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	15	74924711	99701830	14396	0.0399
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	16	593460	68803840	28504	0.3736
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	16	68803908	69408394	258	0.0195
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	16	69415622	81710348	8635	0.38
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	16	81723087	82033175	329	0.0243
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	16	82035390	84286012	1060	0.3696
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	16	84286152	87907437	1981	0.6811
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	17	933971	40065125	17475	-0.4058
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	17	40068510	45536556	2024	0.2412
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	17	45540018	45701586	64	0.6694
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	17	45704023	78388916	17234	0.2265
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	17	78389072	78395193	5	-1.2249
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	17	78402741	78510305	72	0.2142
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	18	319586	75210228	42547	-0.1674
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	19	235018	9557963	3097	-0.4038
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	19	9572586	63570038	20804	0.0326
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	20	403764	37467877	21015	0.036
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	20	37472405	37475460	3	-1.4939
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	20	37479542	46245206	5957	0.0396
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	20	46245249	52191938	3792	0.4006
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	20	52192604	52738860	433	0.7057
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	20	52739883	53952399	925	-0.7
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	20	53956570	61690281	5070	-0.1902
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	21	14269492	30343250	10247	-0.3987
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	21	30344378	30482726	104	0.091
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	21	30485138	46503202	10163	-0.4196
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	22	15803930	47717016	16873	-0.424
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	X	3167107	44666595	18613	0.0047
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	X	44667236	44775526	54	-1.4041
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	X	44777459	55949475	4283	0.0093
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	X	55950843	55954861	4	-1.5001
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	X	55955950	69421394	3677	0.0191
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	X	69421489	69421512	2	-2.9696
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	X	69423244	84770611	5658	0.0015
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	X	84770891	84771012	3	-1.6356
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	X	84771105	114941583	13136	7e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	X	114942586	114942941	2	2.4694
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	X	114942982	154558783	18067	0.0022
