Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	1	3218610	32641004	15347	0.383
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	1	32647850	61351967	16492	0.0348
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	1	61355343	120521760	35777	-0.403
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	1	120522601	162491166	6779	0.3923
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	1	162491309	163313262	657	0.0316
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	1	163313539	170171546	5167	0.4456
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	1	170171795	240360119	44396	0.1191
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	1	240366340	240366378	2	-1.0708
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	1	240366439	242294119	1384	0.1589
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	1	242295647	247813706	2761	0.5179
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	2	484222	9325133	5267	0.0192
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	2	9328193	9373250	31	-0.4362
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	2	9376062	48465627	23309	0.0456
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	2	48468785	48584826	49	-0.4393
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	2	48585963	68338111	11042	0.0447
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	2	68338413	68339426	2	-1.8534
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	2	68341792	82339943	7569	0.0439
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	2	82340154	82386598	38	-0.4593
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	2	82388370	102482430	5994	0.0421
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	2	102487862	102575617	48	-0.4368
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	2	102577560	242476062	77655	-0.0818
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	3	2212571	70583641	40234	-0.417
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	3	70583777	70584560	2	-2.5986
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	3	70592215	82106313	6645	-0.424
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	3	82116774	85800478	1656	0.3748
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	3	85801045	86674437	475	0.0337
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	3	86676552	86677718	4	-1.2766
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	3	86679539	111531114	11269	0.0517
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	3	111532071	111635119	81	-0.4081
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	3	111635403	127855093	9692	0.0423
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	3	127862348	151434948	12590	0.3929
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	3	151438802	151438802	2	-1.406
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	3	151439806	177923212	13247	0.3967
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	3	177927974	177928478	2	-1.7315
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	3	177928517	197538677	10151	0.397
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	4	1053934	22715030	13457	-0.1776
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	4	22715064	22860057	79	-0.4461
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	4	23020400	167458775	78087	-0.1636
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	4	167465716	167466146	3	-1.4999
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	4	167466415	188762240	10846	-0.1651
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	5	914233	37254459	21407	0.6614
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	5	37254763	37259160	3	-0.7031
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	5	37264287	52888663	6120	0.6842
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	5	52890933	52912976	12	1.2509
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	5	52916101	88835023	19822	0.0449
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	5	88838303	89322684	222	-0.3969
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	5	89324079	168286301	45781	0.0427
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	5	168286590	168288096	2	-1.7952
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	5	168288992	180360469	6882	0.0263
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	6	1014281	55327627	32780	0.0484
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	6	55328593	55332545	2	-2.3344
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	6	55333415	83490675	12613	0.0451
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	6	83493373	83493393	2	-2.001
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	6	83493985	144631957	35251	0.0462
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	6	144634333	144698731	43	-0.3773
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	6	144698962	148501944	2412	0.0411
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	6	148506612	148506944	2	-1.6178
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	6	148507255	151126550	1767	0.045
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	6	151130691	151131081	2	1.5703
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	6	151133261	170903919	11365	0.0287
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	7	705284	63128931	33304	0.1879
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	7	63133126	94988980	14802	-0.1354
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	7	94992084	95092044	58	-0.6118
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	7	95098003	118585192	11935	-0.128
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	7	118617211	118771079	83	-0.6968
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	7	118783323	150725722	17045	-0.1359
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	7	150726902	151387197	360	0.2575
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	7	151387964	158385118	3543	-0.1609
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	8	617667	61123647	32314	-0.0757
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	8	61123952	61151150	22	0.4516
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	8	61151574	73132950	6988	0.065
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	8	73133346	73134403	2	-1.4574
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	8	73136485	76566968	2106	0.0816
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	8	76569143	76569842	2	-2.5425
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	8	76570171	86515849	5309	0.0712
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	8	86840960	86861743	43	0.6562
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	8	86863364	90307770	1858	0.0663
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	8	90308657	90398960	90	-0.9169
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	8	90404592	90488550	32	-0.3659
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	8	90495034	90794416	149	0.0979
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	8	90794759	90807763	10	-0.8798
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	8	90808144	97997566	4299	0.0723
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	8	97999965	98150311	61	-0.426
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	8	98150967	110920902	7052	0.0777
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	8	110929559	116105473	2538	0.6853
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	8	116105620	116368790	165	1.1437
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	8	116370576	145232496	18248	0.6833
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	9	789932	8899205	5041	-0.1768
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	9	8899449	9496439	269	-0.4682
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	9	9497040	16841628	4260	-0.1596
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	9	16841763	16843773	2	-1.6817
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	9	16847804	21976870	3871	-0.1578
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	9	21977194	22097933	105	-0.9677
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	9	22098574	23673382	1021	-0.1628
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	9	23676631	23679042	3	-2.8144
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	9	23679627	106153263	31709	-0.1697
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	9	106154424	106155273	2	-2.4153
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	9	106159348	120259077	9908	-0.1607
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	9	120260452	120261120	3	-2.0749
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	9	120263714	140938752	11620	-0.1689
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	10	415240	42955993	26062	-0.1726
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	10	42956469	135225087	54591	0.1554
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	11	456120	134142530	77035	0.01
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	12	889902	15281972	8094	-0.1637
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	12	15282472	15423582	85	0.2609
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	12	15430837	53558312	19063	-0.1519
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	12	53582509	53971815	182	-0.6541
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	12	53977068	133161346	46346	-0.1607
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	13	19450806	28232706	4842	-0.4278
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	13	28233524	32490930	3015	0.2071
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	13	32501940	32725611	140	-1.1272
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	13	32727519	86609218	30655	0.1843
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	13	86612919	86613388	2	-1.6001
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	13	86613919	91044274	2349	0.1756
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	13	91044545	91044980	2	-1.3349
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	13	91047347	99104893	5188	0.1858
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	13	99105892	99212506	77	-0.4579
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	13	99219097	114987458	10212	0.1827
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	14	20501368	67390499	25796	0.0423
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	14	67392078	67592285	71	-0.3095
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	14	67595344	105988038	23438	0.0406
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	15	23687685	76848302	29904	0.0433
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	15	76850960	77134139	107	-0.3417
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	15	77137656	101884307	14395	0.0399
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	16	653459	70246339	28504	0.3736
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	16	70246407	70839337	256	0.0184
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	16	71205194	83152847	8571	0.3787
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	16	83165586	83475674	329	0.0243
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	16	83477889	85728511	1060	0.3696
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	16	85728651	89379936	1981	0.6811
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	17	987221	42709599	17473	-0.4058
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	17	42712984	48181557	2026	0.2412
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	17	48185019	48346587	64	0.6694
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	17	48349024	80795627	17234	0.2264
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	17	80795783	80801904	5	-1.2249
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	17	80809452	80917016	72	0.2142
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	18	329586	77109240	42544	-0.1674
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	19	284018	9696963	3097	-0.4038
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	19	9711586	58878226	20804	0.0326
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	20	455764	38034463	21018	0.036
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	20	38038991	38042046	3	-1.4939
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	20	38046128	46811799	5957	0.0396
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	20	46811842	52758531	3792	0.4006
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	20	52759197	53305453	433	0.7057
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	20	53306476	54518992	925	-0.7
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	20	54523163	62219837	5070	-0.1902
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	21	15347621	31421379	10248	-0.3985
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	21	31422507	31560855	104	0.091
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	21	31563267	47678774	10161	-0.4196
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	22	17423930	49331012	16872	-0.4241
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	X	3157107	44781651	18614	0.0047
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	X	44782292	44890582	54	-1.4041
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	X	44892515	55932750	4283	0.0096
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	X	55934118	55938136	4	-1.5001
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	X	55939225	69504669	3682	0.0192
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	X	69504764	69504787	2	-2.9696
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	X	69506519	84883955	5661	0.0014
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	X	84884235	84884356	3	-1.6356
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	X	84884449	115027555	13143	7e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	X	115028558	115028913	2	2.4694
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_B03_1362198	X	115028954	154905589	18067	0.0022
