Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D01_1362364	1	3208470	163394569	76332	-5e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D01_1362364	1	163395072	163411971	16	0.259
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D01_1362364	1	163412896	163430617	17	0.5951
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D01_1362364	1	163430701	163441931	16	0.2728
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D01_1362364	1	163443195	245880329	52327	0.0055
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D01_1362364	2	474222	20428502	12949	0.0015
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D01_1362364	2	20435538	20444784	11	-1.2268
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D01_1362364	2	20446116	242124735	118050	0.0077
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D01_1362364	3	526235	199023074	106074	0.0047
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D01_1362364	4	1043934	57035453	31099	0.0015
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D01_1362364	4	57041758	57041983	2	-1.8917
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D01_1362364	4	57042991	59786889	1634	0.0045
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D01_1362364	4	59787407	59789211	2	-1.8635
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D01_1362364	4	59791059	67233163	3973	0.0019
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D01_1362364	4	67234137	67235034	2	-1.823
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D01_1362364	4	67243901	189836143	65752	0.0024
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D01_1362364	5	967233	180293075	100248	0.0021
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D01_1362364	6	959281	67235659	36209	0.0025
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D01_1362364	6	67240997	67254642	12	-0.982
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D01_1362364	6	67262049	104293887	20541	5e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D01_1362364	6	104294379	104298310	4	-1.2243
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D01_1362364	6	104300405	170745844	39452	0.0038
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D01_1362364	7	671810	158077879	81132	0.0026
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D01_1362364	8	607667	145304484	81286	0.0011
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D01_1362364	9	779932	38230040	22822	0.0012
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D01_1362364	9	38234416	38312401	65	0.6328
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D01_1362364	9	38312898	140058573	44922	0.0015
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D01_1362364	10	405240	77066897	44077	0.0014
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D01_1362364	10	77073074	77129081	51	0.3203
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D01_1362364	10	77131018	135075077	36527	-0.0016
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D01_1362364	11	446120	49894906	30401	-6e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D01_1362364	11	49901450	50007872	34	-0.869
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D01_1362364	11	50011906	133647740	46600	9e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D01_1362364	12	760163	131671419	73779	0.0044
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D01_1362364	13	18348806	114005560	56484	0.0037
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D01_1362364	14	19571208	99227544	46726	7e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D01_1362364	14	99230133	99232130	2	-1.9389
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D01_1362364	14	99235499	105059083	2575	0.0123
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D01_1362364	15	21238778	41616300	9929	-0.0025
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D01_1362364	15	41616470	41619183	2	-1.8804
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D01_1362364	15	41619215	99701830	34470	-0.0015
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D01_1362364	16	593460	10220263	5031	-0.0057
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D01_1362364	16	10221336	10222225	4	-1.2168
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D01_1362364	16	10222612	87907437	35728	9e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D01_1362364	17	933971	24656721	10686	-0.0022
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D01_1362364	17	24657062	24662482	6	-0.994
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D01_1362364	17	24667596	78510305	26191	0.001
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D01_1362364	18	319586	75210228	42554	-1e-04
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D01_1362364	19	235018	63570038	23906	0.0098
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D01_1362364	20	403764	729451	215	0.0174
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D01_1362364	20	729570	778413	34	0.3492
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D01_1362364	20	779093	61690281	36941	-0.0023
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D01_1362364	21	14269492	46503202	20519	0.0019
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D01_1362364	22	15803930	47717016	16884	-0.0038
BRIAR_p_TCGA_297_298_299_300_S_GenomeWideSNP_6_D01_1362364	X	3167107	154558783	63477	0.0058
