Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	1	3208470	245880329	128981	-8e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	2	474222	159393030	83635	0.0043
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	2	159396633	159407232	8	-1.0208
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	2	159408321	212281202	29442	0.0038
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	2	212283930	212283962	2	-1.5141
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	2	212286118	242124735	18109	0.0044
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	3	526235	37534649	21017	0.0019
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	3	37534747	37539847	10	-0.6041
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	3	37545403	199023074	85272	6e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	4	1043934	20789051	12386	0.0056
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	4	20789125	20789938	5	-0.8641
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	4	20790034	35440598	8877	0.0022
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	4	35442160	35442313	2	-1.396
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	4	35443769	37436009	1394	0.0039
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	4	37436339	37436348	2	-1.194
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	4	37436749	63342254	12056	0.0013
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	4	63345856	63347299	3	-1.4617
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	4	63349269	82320946	9792	0.0017
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	4	82329437	82335701	4	-1.2708
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	4	82335858	91038809	5314	-0.0052
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	4	91039816	91040359	2	-2.1065
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	4	91041694	143730379	28802	-7e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	4	143730691	143733419	2	-1.5345
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	4	143734081	189836143	24037	0.0023
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	5	967233	11567842	7591	9e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	5	11570259	11584049	11	-0.6482
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	5	11587360	123101775	58138	0.0043
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	5	123106247	123106460	3	-1.1612
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	5	123110456	180293075	34685	6e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	6	959281	28315052	18147	0.002
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	6	28315179	28315419	3	-1.0359
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	6	28320468	65878714	17412	9e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	6	65979838	66000258	11	0.558
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	6	66002058	75597817	5638	0.0026
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	6	75600586	75600850	2	-2.5199
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	6	75601640	170745844	55196	7e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	7	671810	158077879	81270	4e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	8	607667	145304484	81459	0.0015
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	9	779932	140058573	67965	5e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	10	405240	135075077	80804	5e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	11	446120	128137348	73773	-0.0018
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	11	128137468	128139435	5	-1.1987
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	11	128141443	128365769	210	0.0036
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	11	128369153	128384408	8	0.3969
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	11	128389518	129526410	659	-0.0038
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	11	129527872	129531857	3	-0.7594
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	11	129532360	130911188	933	0.0029
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	11	130911318	130911353	2	-1.189
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	11	130913389	133647740	1606	-0.0078
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	12	760163	131671419	73891	6e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	13	18348806	114005560	56609	0.0019
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	14	19571208	28793480	4459	-0.005
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	14	28797605	28798105	2	-2.4893
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	14	28801413	105059083	44945	-5e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	15	21238778	99701830	44497	-0.0026
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	16	593460	47886664	15338	-6e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	16	47887644	47891509	7	-1.0941
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	16	47892138	68308770	13077	-0.0023
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	16	68320179	68325023	5	-0.8772
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	16	68328477	74816567	3266	-0.0119
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	16	74818662	76866902	1723	0.5845
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	16	76871781	87907437	7413	-0.0059
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	17	933971	78510305	36952	4e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	18	319586	75210228	42639	2e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	19	235018	9970179	3289	0.0023
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	19	9972065	9972310	2	-1.1855
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	19	9973346	23473049	5426	0.0027
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	19	23474937	23475088	2	-1.4748
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	19	23475529	63570038	15214	-0.0011
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	20	403764	15908144	9675	7e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	20	15909553	15909689	2	-1.8628
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	20	15913919	61690281	27563	4e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	21	14269492	21693979	4725	-0.0018
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	21	21695648	21696896	2	-1.7781
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	21	21706609	46503202	15840	-0.0019
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	22	15803930	47717016	16916	-0.0039
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	X	3167107	128521161	51850	-6e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	X	128521274	128535019	11	-0.9441
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	X	128535876	154558783	11350	-0.0088
