Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	1	3218610	247813706	129037	-8e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	2	484222	242476062	131188	0.0042
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	3	2212571	37559645	21017	0.0019
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	3	37559743	37564843	10	-0.6041
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	3	37570399	197538677	85267	6e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	4	1053934	21179953	12387	0.0055
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	4	21180027	21180840	5	-0.8641
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	4	21180936	35764203	8876	0.0022
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	4	35765765	35765918	2	-1.396
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	4	35767374	37759614	1394	0.0039
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	4	37759944	37759953	2	-1.194
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	4	37760354	63659659	12054	0.0014
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	4	63663261	63664704	3	-1.4617
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	4	63666674	82101922	9791	0.0016
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	4	82110413	82116677	4	-1.2708
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	4	82116834	90587691	5168	-0.0041
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	4	90587971	90602417	2	-1.3693
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	4	90603044	90819786	145	-0.022
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	4	90820793	90821336	2	-2.1065
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	4	90822671	143510929	28809	-7e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	4	143511241	143513969	2	-1.5345
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	4	143514631	188763651	24037	0.0023
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	5	914233	11514842	7593	8e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	5	11517259	11531049	11	-0.6482
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	5	11534360	123073876	58136	0.0043
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	5	123078348	123078561	3	-1.1612
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	5	123082557	180360469	34685	6e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	6	1014281	28207073	18148	0.002
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	6	28207200	28207440	3	-1.0359
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	6	28212489	65821993	17414	8e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	6	65923117	65943537	11	0.558
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	6	65945337	75541097	5638	0.0025
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	6	75543866	75544130	2	-2.5199
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	6	75544920	170903919	55202	7e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	7	705284	158385118	81271	4e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	8	617667	145232496	81466	0.0015
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	9	789932	140938752	67977	5e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	10	415240	135225087	80802	5e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	11	456120	128632138	73763	-0.0018
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	11	128632258	128634225	5	-1.1987
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	11	128636233	128860559	210	0.0036
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	11	128863943	128879198	8	0.3969
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	11	128884308	130021200	659	-0.0038
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	11	130022662	130026647	3	-0.7594
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	11	130027150	131405978	933	0.0029
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	11	131406108	131406143	2	-1.189
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	11	131408179	134142530	1606	-0.0078
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	12	889902	133161346	73886	6e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	13	19450806	114987458	56605	0.0019
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	14	20501368	29723729	4459	-0.005
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	14	29727854	29728354	2	-2.4893
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	14	29731662	105988038	44943	-6e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	15	23687685	101884307	44495	-0.0026
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	16	653459	49329163	15338	-6e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	16	49330143	49334008	7	-1.0941
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	16	49334637	69751269	13077	-0.0023
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	16	69762678	69767522	5	-0.8772
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	16	69770976	76259066	3200	-0.0117
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	16	76261161	78309401	1723	0.5845
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	16	78314280	89379936	7413	-0.0059
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	17	987221	80917016	36952	3e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	18	329586	77109240	42636	2e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	19	284018	10109179	3289	0.0023
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	19	10111065	10111310	2	-1.1855
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	19	10112346	23681209	5426	0.0027
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	19	23683097	23683248	2	-1.4748
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	19	23683689	58878226	15214	-0.0011
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	20	455764	15960144	9678	7e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	20	15961553	15961689	2	-1.8628
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	20	15965919	62219837	27563	4e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	21	15347621	22772108	4725	-0.0018
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	21	22773777	22775025	2	-1.7781
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	21	22784738	47678774	15839	-0.0019
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	22	17423930	49331012	16915	-0.0039
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	X	3157107	128693480	51869	-4e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	X	128693593	128707338	11	-0.9441
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H05_1388048	X	128708195	154905589	11347	-0.0084
