Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H07_1388010	1	3218610	160552576	73412	-0.0107
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H07_1388010	1	160556144	160556188	2	-1.1959
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H07_1388010	1	160556904	247813706	55679	7e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H07_1388010	2	484222	66455372	38491	0.0319
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H07_1388010	2	66457788	66458282	3	-0.906
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H07_1388010	2	66461367	214086259	75584	0.0102
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H07_1388010	2	214086286	214086760	2	-1.3019
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H07_1388010	2	214086979	242476062	17193	-0.0082
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H07_1388010	3	2212571	23389434	12195	-0.0545
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H07_1388010	3	23396826	23402058	2	1.1987
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H07_1388010	3	23402143	58717229	20573	-0.0231
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H07_1388010	3	58717691	58719573	2	-1.2249
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H07_1388010	3	58723380	197538677	73584	-0.0063
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H07_1388010	4	1053934	109490564	59994	-0.0353
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H07_1388010	4	109492432	109520265	3	-1.6459
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H07_1388010	4	109530325	188763651	42732	-0.0212
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H07_1388010	5	914233	54445083	28626	0.0024
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H07_1388010	5	54445273	54483269	31	-1.0038
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H07_1388010	5	54488824	126457615	39137	-0.0444
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H07_1388010	5	126458126	126458317	2	-1.5509
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H07_1388010	5	126463639	180360469	32688	-0.0041
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H07_1388010	6	1014281	2223752	917	-0.0516
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H07_1388010	6	2224642	2261309	23	0.3902
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H07_1388010	6	2264429	105256223	56534	0.0023
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H07_1388010	6	105257635	105262108	3	-0.9197
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H07_1388010	6	105264056	170903919	39003	0.0366
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H07_1388010	7	705284	32464947	17888	0.0072
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H07_1388010	7	32465702	32480622	9	-0.5795
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H07_1388010	7	32482185	46442336	8495	-0.0132
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H07_1388010	7	46444697	55629723	6503	0.3771
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H07_1388010	7	55632524	68696421	2664	0.1099
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H07_1388010	7	68700168	69787793	579	0.6946
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H07_1388010	7	69790931	69802981	5	0.3445
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H07_1388010	7	69803480	113401966	21170	0.0132
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H07_1388010	7	113402551	114205782	372	0.2288
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H07_1388010	7	114206349	134667478	11324	-0.0181
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H07_1388010	7	134670462	134670827	4	-0.8985
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H07_1388010	7	134674190	158385118	12292	-0.0289
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H07_1388010	8	617667	40435969	23270	-0.0571
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H07_1388010	8	40436427	40436774	3	-1.1142
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H07_1388010	8	40440599	145232496	58238	0.0525
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H07_1388010	9	789932	140938752	68013	-0.0287
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H07_1388010	10	415240	72249055	41506	0.01
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H07_1388010	10	72250636	72252896	2	-1.5698
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H07_1388010	10	72256879	135225087	39343	-0.0127
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H07_1388010	11	456120	134142530	77236	-0.0159
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H07_1388010	12	889902	12572883	6366	0.023
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H07_1388010	12	12579050	12579134	2	-1.2401
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H07_1388010	12	12589069	133161346	67550	0.0121
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H07_1388010	13	19450806	85968314	38370	0.0661
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H07_1388010	13	85968382	85971052	2	-1.4034
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H07_1388010	13	85972623	108041866	13991	0.0924
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H07_1388010	13	108042181	108043103	2	-1.0247
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H07_1388010	13	108044825	114987458	4278	0.0602
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H07_1388010	14	20501368	105988038	49429	-0.0201
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H07_1388010	15	23687685	65441490	23447	0.0029
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H07_1388010	15	65443027	65454147	2	-1.1419
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H07_1388010	15	65454377	101884307	21069	0.0138
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H07_1388010	16	653459	89379936	40785	-0.0466
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H07_1388010	17	987221	12407589	6254	0.0359
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H07_1388010	17	12408047	15565258	1210	0.2512
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H07_1388010	17	15565469	80917016	29506	0.0259
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H07_1388010	18	329586	8585211	4500	-0.0161
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H07_1388010	18	8585336	8588862	5	-0.8061
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H07_1388010	18	8589187	8842312	228	0.0072
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H07_1388010	18	8843160	8843643	2	1.2642
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H07_1388010	18	8844406	77109240	37918	-0.0462
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H07_1388010	19	284018	58878226	23936	0.0021
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H07_1388010	20	455764	62219837	37266	0.0488
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H07_1388010	21	15347621	47678774	20575	-0.0153
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H07_1388010	22	17423930	48909727	16635	0.0115
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H07_1388010	22	48911999	48912283	2	-1.2197
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H07_1388010	22	48912807	49331012	288	-0.0062
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H07_1388010	X	3157107	132489905	53722	-0.0021
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H07_1388010	X	132490133	132496732	4	-1.1341
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H07_1388010	X	132498010	154905589	9742	0.0211
