Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	1	3208470	14911358	6287	-0.0038
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	1	14911998	14912260	2	-2.0676
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	1	14915334	240126892	119748	0.0016
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	1	240129468	240133607	7	-1.168
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	1	240257353	242318818	1268	0.0063
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	1	242320144	242320392	2	-1.4525
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	1	242320472	245880329	1565	0.0096
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	2	474222	3762245	1386	-0.003
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	2	3764400	3764812	3	-1.452
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	2	3764889	42310187	23384	7e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	2	42310411	42324326	11	0.6165
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	2	42331153	67054666	14116	0.0065
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	2	67058578	67059628	2	-2.4183
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	2	67062606	202542083	68448	0.0025
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	2	202542327	202542373	2	-3.1169
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	2	202544676	242124735	23775	0.0043
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	3	526235	3341612	592	0.0024
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	3	3342221	3351422	12	-1.2883
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	3	3351689	11726280	4961	9e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	3	11728927	11732214	3	-1.5553
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	3	11733418	75159130	37859	0.0023
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	3	75161659	75168457	4	-1.2087
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	3	75168684	117578907	19701	-6e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	3	117578974	117580141	5	-1.1895
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	3	117581731	190573145	39104	0.002
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	3	190577002	190581421	4	-1.174
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	3	190584595	199023074	3990	-0.0024
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	4	1043934	53730827	28873	0.0017
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	4	53735644	53774304	12	0.666
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	4	53774999	60654673	4387	0.0015
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	4	60655905	60655944	2	-1.5426
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	4	60656588	94741126	18256	0.0023
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	4	94741372	94747689	7	-1.1034
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	4	94760264	189836143	51083	0.0011
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	5	967233	57313363	30388	0
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	5	57316656	57321787	8	-1.1757
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	5	57333087	180293075	69984	0.0035
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	6	959281	170745844	96331	7e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	7	671810	9640855	3565	-0.0029
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	7	9646547	9646768	3	1.3215
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	7	9647117	158077879	77657	0.0021
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	8	607667	107936868	58681	0.0018
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	8	107939556	107942926	8	-1.3326
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	8	107948076	145304484	22729	0.0025
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	9	779932	20170986	12199	-5e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	9	20173302	20173392	4	-1.0895
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	9	20176459	140058573	55720	-0.001
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	10	405240	6397443	3851	0.0034
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	10	6398110	6398221	2	-1.6313
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	10	6398324	11969833	4270	0.0083
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	10	11970081	11971352	2	-3.2525
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	10	11973295	135075077	72621	-7e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	11	446120	55998736	30625	-5e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	11	55998824	55998930	3	-1.4607
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	11	55999085	133647740	46527	-4e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	12	760163	131671419	73844	0.0016
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	13	18348806	19621698	455	0.0038
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	13	19625298	19630487	5	-1.1294
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	13	19630505	114005560	56113	0.001
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	14	19571208	24791556	2257	-5e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	14	24792168	24792303	2	-1.3384
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	14	24794843	33049725	4898	0.0011
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	14	33050089	33050505	3	-1.636
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	14	33050616	58943742	14319	0.0022
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	14	58944424	58952581	4	-1.0513
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	14	58952891	105059083	27891	-9e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	15	21238778	99701830	44461	0.0013
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	16	593460	80875546	36704	-0.0045
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	16	80875989	80880714	2	-1.9227
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	16	80880739	87907437	4088	-0.0048
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	17	933971	51918340	23335	-0.0043
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	17	51918595	51920702	2	-2.2726
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	17	51921447	74648429	12153	-0.0038
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	17	74651794	74655055	5	-1.2633
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	17	74662375	78510305	1427	-0.0092
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	18	319586	75210228	42612	-1e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	19	235018	36719170	11811	-0.0055
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	19	36719255	36719843	2	-1.6256
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	19	36722141	63570038	12100	-0.0086
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	20	403764	19012514	12235	0.0027
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	20	19013778	19016092	2	-1.4368
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	20	19016363	61690281	24977	0.0044
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	21	14269492	46503202	20553	-0.0026
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	22	15803930	47717016	16903	-0.005
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	X	3167107	12533515	3246	-0.0067
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	X	12535827	12538455	5	-2.4642
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	X	12540051	149275726	57953	-0.0102
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	X	149276141	149278603	2	-5.1642
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	X	149278645	150310463	639	-0.0478
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	X	150310642	150311294	2	-2.7917
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	X	150312684	154558783	1026	0.0039
