Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	1	3218610	15038771	6287	-0.0038
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	1	15039411	15039673	2	-2.0676
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	1	15042747	242060269	119805	0.0015
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	1	242062845	242066984	7	-1.168
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	1	242190730	244252195	1267	0.0064
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	1	244253521	244253769	2	-1.4525
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	1	244253849	247813706	1565	0.0096
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	2	484222	3784370	1386	-0.003
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	2	3786525	3786937	3	-1.452
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	2	3787014	42456683	23380	6e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	2	42456907	42470822	11	0.6165
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	2	42477649	67201162	14114	0.0066
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	2	67205074	67206124	2	-2.4183
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	2	67209102	202833838	68446	0.0025
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	2	202834082	202834128	2	-3.1169
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	2	202836431	242476062	23775	0.0043
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	3	2212571	3366612	591	0.0014
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	3	3367221	3376422	12	-1.2883
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	3	3376689	11751280	4961	9e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	3	11753927	11757214	3	-1.5553
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	3	11758418	75076440	37858	0.0023
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	3	75078969	75085767	4	-1.2087
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	3	75085994	116096217	19698	-7e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	3	116096284	116097451	5	-1.1895
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	3	116099041	189090451	39103	0.002
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	3	189094308	189098727	4	-1.174
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	3	189101901	197538677	3990	-0.0024
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	4	1053934	54036070	28873	0.0016
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	4	54040887	54079547	12	0.666
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	4	54080242	60972078	4385	0.0014
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	4	60973310	60973349	2	-1.5426
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	4	60973993	94522103	18257	0.0023
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	4	94522349	94528666	7	-1.1034
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	4	94541241	188763651	51089	0.0011
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	5	914233	57277606	30388	0
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	5	57280899	57286030	8	-1.1757
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	5	57297330	180360469	69984	0.0035
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	6	1014281	170903919	96340	7e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	7	705284	9674330	3565	-0.0029
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	7	9680022	9680243	3	1.3215
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	7	9680592	158385118	77658	0.002
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	8	617667	107867692	58685	0.0018
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	8	107870380	107873750	8	-1.3326
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	8	107878900	145232496	22732	0.0024
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	9	789932	20180986	12201	-5e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	9	20183302	20183392	4	-1.0895
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	9	20186459	140938752	55730	-0.001
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	10	415240	6357437	3851	0.0034
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	10	6358104	6358215	2	-1.6313
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	10	6358318	11929827	4270	0.0083
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	10	11930075	11931346	2	-3.2525
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	10	11933289	135225087	72619	-7e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	11	456120	56242160	30621	-5e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	11	56242248	56242354	3	-1.4607
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	11	56242509	134142530	46521	-4e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	12	889902	133161346	73839	0.0016
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	13	19450806	20723698	455	0.0038
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	13	20727298	20732487	5	-1.1294
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	13	20732505	114987458	56109	0.001
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	14	20501368	25721716	2257	-5e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	14	25722328	25722463	2	-1.3384
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	14	25725003	26763627	681	-0.004
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	14	26769722	26769725	3	0.8299
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	14	26769914	33979974	4214	0.0014
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	14	33980338	33980754	3	-1.636
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	14	33980865	59873989	14317	0.0021
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	14	59874671	59882828	4	-1.0513
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	14	59883138	105988038	27891	-9e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	15	23687685	101884307	44459	0.0013
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	16	653459	82318045	36638	-0.0045
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	16	82318488	82323213	2	-1.9227
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	16	82323238	89379936	4088	-0.0048
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	17	987221	54563341	23335	-0.0043
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	17	54563596	54565703	2	-2.2726
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	17	54566448	77136834	12153	-0.0038
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	17	77140199	77143460	5	-1.2633
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	17	77150780	80917016	1427	-0.0092
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	18	329586	77109240	42609	-1e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	19	284018	32027330	11811	-0.0055
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	19	32027415	32028003	2	-1.6256
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	19	32030301	58878226	12100	-0.0086
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	20	455764	19064514	12238	0.0027
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	20	19065778	19068092	2	-1.4368
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	20	19068363	62219837	24977	0.0044
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	21	15347621	47678774	20552	-0.0026
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	22	17423930	49331012	16902	-0.0051
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	X	3157107	12623594	3248	-0.0063
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	X	12625906	12628534	5	-2.4642
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	X	12630130	149525068	57968	-0.0098
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	X	149525483	149527945	2	-5.1642
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	X	149527987	150559805	639	-0.0468
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	X	150559984	150560636	2	-2.7917
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H09_1388132	X	150562026	154905589	1026	0.0039
