Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H11_1388026	1	3208470	245880329	129049	5e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H11_1388026	2	474222	242124735	131279	0.0022
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H11_1388026	3	526235	28896258	15657	-3e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H11_1388026	3	28896623	28898347	3	-1.2339
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H11_1388026	3	28898587	61101861	17847	-0.0027
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H11_1388026	3	61102245	61103057	3	-1.3261
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H11_1388026	3	61105940	199023074	72855	0.0014
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H11_1388026	4	1043934	68710504	37628	0.0015
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H11_1388026	4	68710529	68712535	3	-1.1586
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H11_1388026	4	68716644	82249175	6864	4e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H11_1388026	4	82249412	82253795	4	-0.9387
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H11_1388026	4	82254091	95520757	7528	-0.0031
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H11_1388026	4	95521627	95525342	2	1.2668
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H11_1388026	4	95527155	189836143	50699	0.0013
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H11_1388026	5	967233	180293075	100481	-7e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H11_1388026	6	959281	51000687	29891	-5e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H11_1388026	6	51001210	51001250	2	1.4243
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H11_1388026	6	51007232	130706341	42349	1e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H11_1388026	6	130707082	130721193	7	-0.948
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H11_1388026	6	130721658	138467725	5168	0.0042
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H11_1388026	6	138467749	138467764	2	-1.283
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H11_1388026	6	138468116	170745844	19052	3e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H11_1388026	7	671810	11277411	4263	-0.0018
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H11_1388026	7	11311644	11311839	3	-1.1536
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H11_1388026	7	11315863	13242067	1374	0.0012
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H11_1388026	7	13245147	13245533	2	-1.3499
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H11_1388026	7	13248478	158077879	75670	0.0015
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H11_1388026	8	607667	145304484	81509	0.0016
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H11_1388026	9	779932	3458075	1853	0.0017
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H11_1388026	9	3463297	3463360	2	-1.3085
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H11_1388026	9	3463645	5922713	1618	0.006
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H11_1388026	9	5924967	5925619	3	-1.1182
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H11_1388026	9	5926099	92794541	35575	-0.002
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H11_1388026	9	92794627	92794650	2	-1.2302
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H11_1388026	9	92794991	140058573	28953	-0.0022
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H11_1388026	10	405240	28762508	19535	-0.0012
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H11_1388026	10	28763014	28766029	2	1.2069
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H11_1388026	10	28766031	57659093	13202	0.0041
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H11_1388026	10	57659332	57660522	2	-1.5381
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H11_1388026	10	57660529	135075077	48119	0.0016
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H11_1388026	11	446120	133647740	77246	1e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H11_1388026	12	760163	25746641	14649	4e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H11_1388026	12	25749409	25751367	2	-1.4839
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H11_1388026	12	25756524	73465688	25387	0.0035
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H11_1388026	12	73472179	73472581	3	-1.3074
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H11_1388026	12	73473967	131671419	33883	0.0018
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H11_1388026	13	18348806	114005560	56646	6e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H11_1388026	14	19571208	60893858	22527	6e-04
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H11_1388026	14	60894885	60895157	2	1.4341
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H11_1388026	14	60895660	105059083	26905	0.004
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H11_1388026	15	21238778	99701830	44517	0.0041
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H11_1388026	16	593460	87907437	40853	0.0022
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H11_1388026	17	933971	78510305	36969	0.0037
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H11_1388026	18	319586	75210228	42663	0.0031
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H11_1388026	19	235018	63570038	23941	0.0016
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H11_1388026	20	403764	32889873	18545	0.0033
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H11_1388026	20	32896184	32898223	2	-1.419
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H11_1388026	20	32898822	61690281	18719	0.0042
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H11_1388026	21	14269492	22883649	5397	0.007
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H11_1388026	21	22883971	22884021	2	-1.2409
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H11_1388026	21	22884270	24507255	793	-0.0033
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H11_1388026	21	24510120	24510210	3	-0.9468
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H11_1388026	21	24510827	46503202	14382	0.0024
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H11_1388026	22	15803930	47717016	16926	0.0026
STOPE_p_TCGAb3_58_59_60_61_62_N_GenomeWideSNP_6_H11_1388026	X	3167107	154558783	63509	0.0021
