Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	1	3208470	245880329	128940	0.0025
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	2	474222	242124735	131164	0.0089
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	3	526235	199023074	106285	-0.0015
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	4	1043934	189836143	102622	-5e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	5	967233	125281866	67085	-3e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	5	125281894	125282356	2	-1.6524
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	5	125290167	180293075	33304	3e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	6	959281	170745844	96376	0.002
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	7	671810	158077879	81250	0.0017
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	8	607667	79236963	42913	0.0028
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	8	79239157	79240072	2	-1.7866
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	8	79246202	145304484	38540	1e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	9	779932	140058573	67959	3e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	10	405240	85507921	49646	0.0014
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	10	85508820	85513823	2	-2.1174
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	10	85514075	135075077	31129	0.0031
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	11	446120	38598510	24119	-0.0023
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	11	38602138	38604735	3	-1.1624
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	11	38604791	95008102	27412	0.001
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	11	95011000	95011016	2	-1.4209
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	11	95012627	120056261	16255	0.0038
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	11	120056629	120058916	5	-1.1504
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	11	120059251	133647740	9394	0.0059
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	12	760163	131671419	73873	-0.0015
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	13	18348806	21382207	1327	0.0036
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	13	21382411	21382460	2	1.2598
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	13	21382841	61609789	23871	0.0014
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	13	61612406	61617920	5	-1.071
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	13	61618016	114005560	31368	5e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	14	19571208	105059083	49389	-0.0032
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	15	21238778	99701830	44486	5e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	16	593460	72855085	30746	3e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	16	72856547	72858978	3	-1.1109
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	16	72859532	76679632	2503	-0.0072
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	16	76682217	76744199	42	0.5147
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	16	76746239	87907437	7546	-0.0058
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	17	933971	9468849	4275	0.0089
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	17	9470256	9474282	4	-1.1013
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	17	9481499	78510305	32682	0.0032
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	18	319586	13778361	7943	0.009
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	18	13783244	13799138	2	-1.3554
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	18	13799356	75210228	34662	0.0017
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	19	235018	63570038	23939	0.0078
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	20	403764	61690281	37255	0.0012
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	21	14269492	46503202	20566	-0.0037
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	22	15803930	32414086	7442	0.005
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	22	32414846	32415088	3	-1.0045
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	22	32416683	47717016	9469	0.0061
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	X	3167107	100247439	38819	0.0026
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	X	100251234	100259227	3	-1.4439
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	X	100259872	154558783	24903	0.0027
