Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	1	3218610	247813706	128994	0.0025
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	2	484222	242476062	131156	0.0089
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	3	2212571	197538677	106279	-0.0015
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	4	1053934	188763651	102627	-5e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	5	914233	125253967	67085	-3e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	5	125253995	125254457	2	-1.6524
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	5	125262268	180360469	33304	4e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	6	1014281	170903919	96385	0.002
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	7	705284	158385118	81251	0.0017
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	8	617667	79074408	42917	0.0028
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	8	79076602	79077517	2	-1.7866
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	8	79083647	145232496	38543	1e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	9	789932	140938752	67971	3e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	10	415240	85517941	49647	0.0014
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	10	85518840	85523843	2	-2.1174
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	10	85524095	135225087	31126	0.0031
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	11	456120	38641934	24116	-0.0023
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	11	38645562	38648159	3	-1.1624
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	11	38648215	95368454	27409	0.001
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	11	95371352	95371368	2	-1.4209
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	11	95372979	120551051	16251	0.0039
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	11	120551419	120553706	5	-1.1504
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	11	120554041	134142530	9394	0.0059
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	12	889902	133161346	73868	-0.0015
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	13	19450806	22484207	1327	0.0036
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	13	22484411	22484460	2	1.2598
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	13	22484841	62711788	23868	0.0014
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	13	62714405	62719919	5	-1.071
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	13	62720015	114987458	31367	5e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	14	20501368	105988038	49387	-0.0032
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	15	23687685	101884307	44484	5e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	16	653459	74297584	30682	4e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	16	74299046	74301477	3	-1.1109
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	16	74302031	78122131	2503	-0.0072
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	16	78124716	78186698	42	0.5147
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	16	78188738	89379936	7546	-0.0058
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	17	987221	9528124	4275	0.0089
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	17	9529531	9533557	4	-1.1013
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	17	9540774	80917016	32682	0.0032
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	18	329586	13788361	7945	0.009
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	18	13793244	13809138	2	-1.3554
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	18	13809356	77109240	34657	0.0017
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	19	284018	58878226	23939	0.0078
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	20	455764	62219837	37258	0.0012
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	21	15347621	47678774	20565	-0.0037
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	22	17423930	34084086	7441	0.005
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	22	34084846	34085088	3	-1.0045
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	22	34086683	49331012	9469	0.0061
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	X	3157107	100360783	38832	0.0025
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	X	100364578	100372571	3	-1.4439
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B09_802058	X	100373216	154905589	24907	0.0027
