Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	1	51598	799636	66	-0.2026
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	1	802895	3187340	680	0.2916
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	1	3187607	5934492	2067	0.016
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	1	5937150	5981909	25	0.3698
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	1	5984235	12815095	3723	0.0232
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	1	12832564	12850443	8	0.7071
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	1	12906093	16019979	1842	0.0046
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	1	16021124	16027597	16	0.6737
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	1	16038248	16217414	83	-0.0418
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	1	16217842	16285852	16	0.4129
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	1	16289572	21558032	3353	0.0192
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	1	21560344	21642584	46	0.2694
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	1	21650847	22191588	320	0.0178
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	1	22193102	22210712	8	-0.9728
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	1	22214976	22307734	59	0.2159
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	1	22308310	22366564	36	-0.0186
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	1	22367214	22393338	19	0.2971
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	1	22396314	25455928	1801	0.0209
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	1	25465715	25519573	28	0.8137
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	1	25534088	37617827	6454	0.017
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	1	37621380	37693270	46	0.2423
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	1	37693630	39877048	1196	-0.0017
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	1	39877171	39918840	18	0.4431
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	1	39919098	72535958	21057	0.0063
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	1	72541006	72583721	47	-0.8691
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	1	72583736	105814899	21035	-0.0047
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	1	105820728	105823883	16	-0.5415
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	1	105823898	110025907	2655	-0.0072
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	1	110025950	110047804	38	-0.3627
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	1	110051758	112459144	1923	0.0159
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	1	112460047	112498913	52	-0.246
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	1	112507479	143661332	5317	-0.0043
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	1	143669045	143804068	55	-0.2715
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	1	143814437	150821800	2664	0.0433
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	1	150822151	150853218	36	1.4977
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	1	150857118	151028670	176	-0.0044
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	1	151028881	151035324	32	0.4844
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	1	151040529	195005259	29536	0.0018
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	1	195005391	195082414	90	0.2411
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	1	195083353	229951423	23377	0.0053
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	1	229953194	230033485	57	0.2412
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	1	230041014	230914481	773	-3e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	1	230920085	230947363	16	0.4129
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	1	230947531	241115363	7874	0.0092
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	1	241116497	241191134	72	0.3035
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	1	241195975	247191011	3781	0.0131
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	2	2784	86981712	59250	0.0093
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	2	86982714	87777487	210	0.3817
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	2	87805782	89767595	760	0.0267
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	2	89767654	89771243	2	2.1108
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	2	89771360	107807168	7704	0.0049
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	2	107813401	107847339	2	1.5836
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	2	107858520	111966343	1679	0.0215
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	2	111966842	112084296	25	0.4674
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	2	112089640	117288695	3084	0.013
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	2	117293492	117320850	15	-0.4185
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	2	117322991	126158693	5706	0.0047
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	2	126168121	126168383	2	-2.5106
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	2	126168402	127558707	904	0.0166
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	2	127558794	127575116	13	0.5071
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	2	127577300	146581839	11534	0.0069
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	2	146582217	146583177	10	-0.5273
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	2	146583268	149811193	1636	0.0057
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	2	149813849	149815899	2	-1.0499
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	2	149816145	150739048	628	0.0145
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	2	150739697	150745978	5	-0.9847
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	2	150747454	183792398	20594	0.0061
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	2	183793698	183797969	10	-0.8661
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	2	183802243	208058436	14103	-0.0018
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	2	208058492	208058507	2	-2.3627
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	2	208058564	215431551	4709	-0.0028
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	2	215437995	215439066	2	1.3716
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	2	215439435	226215469	7109	0.0102
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	2	226216082	226216239	2	-1.2618
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	2	226218503	227954773	1124	0.0104
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	2	227954932	227962516	5	0.7061
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	2	227967101	229059247	720	0.0065
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	2	229059480	229060341	2	1.0522
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	2	229063412	229465065	232	0
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	2	229465113	229468157	12	-0.4641
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	2	229468327	234271934	2806	0.0251
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	2	234273832	234327002	42	0.2635
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	2	234327781	241259994	4775	0.0135
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	2	241274730	241384333	34	0.3406
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	2	241386121	242125660	382	0.0396
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	2	242126050	242432069	62	0.2716
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	2	242564139	242683359	113	-0.6361
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	2	242685926	242738129	29	0.0622
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	3	35345	68828854	47853	-9e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	3	68828949	68830103	14	-1.4249
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	3	68831448	89477313	12663	-0.0012
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	3	89477341	89502071	48	-0.6743
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	3	89502611	100420474	3241	-0.0115
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	3	100427148	100427989	14	-0.4356
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	3	100428085	100431492	9	-0.9571
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	3	100431602	100434524	18	-0.4199
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	3	100435082	129760849	18050	-0.003
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	3	129765387	129815369	25	0.4158
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	3	129816962	131240908	661	0.0018
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	3	131243312	131294045	65	0.4063
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	3	131302292	138358462	4364	0.0012
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	3	138359034	138365512	8	-0.8837
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	3	138366782	152003990	8473	-0.0024
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	3	152004153	152054049	33	0.462
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	3	152062471	163995433	7396	0.0015
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	3	163995786	164015644	14	-0.474
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	3	164017424	164023184	6	-1.8662
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	3	164028410	190843448	16732	0.002
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	3	190846372	190853682	12	-0.7677
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	3	190853708	194360739	2498	0.0041
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	3	194360889	194365597	17	-1.0526
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	3	194369129	199380515	2707	0.0457
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	4	2281	65023	69	-0.2743
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	4	65174	2394040	885	0.0696
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	4	2396440	2406495	7	0.4892
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	4	2407088	3424534	494	0.0094
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	4	3433250	3492481	23	0.3213
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	4	3499668	3569248	34	0.0072
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	4	3569667	3571982	2	-2.1616
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	4	3579188	7473165	2794	0.0169
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	4	7477838	7520938	44	0.4355
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	4	7523311	9819488	1453	0.0071
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	4	9832514	9844366	35	0.5303
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	4	9845240	34449910	16976	-0.0027
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	4	34455255	34495606	42	-0.477
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	4	34497735	42528549	5298	0.0045
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	4	42531155	42532440	2	-1.8073
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	4	42532859	69054598	14196	-0.0087
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	4	69057536	69166704	63	0.506
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	4	69168435	70158099	334	-0.0524
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	4	70162233	70266388	54	-0.617
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	4	70266611	108287862	22922	-0.0061
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	4	108290968	108291077	3	1.5146
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	4	108291337	115393149	4429	-0.0081
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	4	115394772	115403715	26	0.6283
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	4	115403759	157187630	24953	-0.0046
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	4	157187733	157187748	2	-1.8766
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	4	157187923	162099591	3080	-0.0069
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	4	162099647	162104050	17	-0.7341
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	4	162104358	173659097	7323	-0.0109
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	4	173661522	173665218	7	-0.7158
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	4	173677707	177269433	2044	-4e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	4	177270640	177270757	2	1.2141
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	4	177273077	190432112	9443	0.0086
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	4	190432616	190436258	3	-2.7897
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	4	190436765	190563376	78	-0.0452
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	4	190563468	190566878	2	-1.7502
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	4	190566924	191261904	305	-0.0085
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	5	68532	9378205	7519	0.0265
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	5	9378274	9427420	54	0.3046
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	5	9429737	12853889	2642	0.0017
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	5	12868780	12891533	14	0.5795
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	5	12902201	151494364	83340	-0.0043
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	5	151495579	151498416	12	-0.7818
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	5	151498493	175392693	16775	0.0054
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	5	175398295	175402113	2	1.1534
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	5	175402930	175983117	241	0.0358
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	5	175983321	176198645	124	0.2654
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	5	176201345	180722926	2370	0.0288
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	6	94661	9150481	7409	0.0163
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	6	9157368	9189309	3	-2.0796
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	6	9282778	24330678	11182	0.0048
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	6	24331558	24364750	22	0.3756
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	6	24376732	25054650	458	-0.0139
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	6	25055751	25055784	2	1.3959
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	6	25059178	25556216	388	0.0272
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	6	25558005	25592274	22	0.3586
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	6	25593701	26840385	793	0.0175
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	6	26845011	26881488	27	0.3127
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	6	26891646	29945167	1437	0.0199
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	6	29945293	29958175	15	-1.2319
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	6	29958253	31388802	672	0
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	6	31394255	31395480	6	-1.4259
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	6	31403385	32557501	511	0.0919
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	6	32560779	32734596	67	-0.5622
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	6	32758590	54039339	13746	8e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	6	54039378	54039762	2	-1.5924
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	6	54039814	66456274	5061	-0.0103
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	6	66456472	66460573	19	-0.7983
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	6	66463848	95399868	18811	-0.0076
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	6	95403142	95650995	175	-1.0459
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	6	95653550	103841522	4829	-0.0052
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	6	103844669	103868754	46	-1.1973
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	6	103872163	154887311	32951	-0.0014
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	6	154887555	154896405	2	1.3146
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	6	154901403	170892930	11284	0.0206
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	7	52911	1041237	261	0.1578
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	7	1042099	1052061	6	-0.1802
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	7	1052603	1155684	67	0.3455
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	7	1155704	3540838	1267	0.0367
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	7	3541103	3541465	2	-1.6
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	7	3542022	4418238	738	0.0424
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	7	4418337	4418616	2	-1.1706
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	7	4422655	4470702	41	0.0091
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	7	4470843	4533120	41	0.2777
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	7	4533134	22401305	13671	-0.0095
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	7	22401997	22403012	2	1.312
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	7	22405279	22499511	82	0.0066
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	7	22499674	22503249	3	-1.5648
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	7	22503338	38261521	11250	0.001
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	7	38264360	38363001	123	0.2524
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	7	38364572	46589679	5287	0.0029
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	7	46590368	46590401	2	-1.1897
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	7	46592594	54353999	5725	-0.0045
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	7	54354003	54354011	5	2.1748
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	7	54360982	64206287	3139	0.0106
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	7	64231500	64233133	6	0.9871
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	7	64274563	100741576	20535	5e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	7	100741642	100928910	86	0.2827
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	7	100929054	131379706	18422	1e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	7	131381066	131488634	83	0.3078
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	7	131489296	143540378	7914	0.0145
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	7	143542557	143671993	34	-0.4222
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	7	143680234	152778571	5588	0.0078
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	7	152778578	152778645	2	-2.7979
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	7	152778648	156078435	2479	0.0156
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	7	156084551	156086940	4	-0.8307
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	7	156087669	158819765	1632	0.059
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	8	21254	1354475	903	0.0615
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	8	1354769	1355009	3	-1.0603
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	8	1355095	7225429	6953	0.0208
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	8	7237790	7825372	146	-0.4153
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	8	7836168	7996009	35	0.0362
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	8	7996372	7999869	3	-1.0808
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	8	8000007	11932654	3255	0.0343
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	8	11972069	12284553	30	-0.2753
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	8	12284689	12291857	27	-0.7671
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	8	12305298	12466942	59	-0.2699
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	8	12468116	15337333	2655	-0.0149
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	8	15338302	15339816	2	-3.2428
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	8	15341074	25028104	7773	1e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	8	25030360	25031417	5	0.5026
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	8	25031487	25035904	16	0.9776
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	8	25039986	25040140	4	0.532
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	8	25040167	39349816	9029	0.0045
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	8	39354760	39504351	58	0.9216
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	8	39506122	72374919	17914	0.0011
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	8	72377865	72379153	9	-2.2835
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	8	72382417	76168050	2596	-0.0032
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	8	76171258	76180750	16	0.441
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	8	76181769	110936779	20759	-0.0015
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	8	110937650	110938920	2	1.3787
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	8	110945819	112360670	752	0.0046
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	8	112363455	112364436	10	0.9867
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	8	112369457	115703843	1830	-0.0255
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	8	115703883	115710907	31	-0.593
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	8	115719873	146268959	21078	0.0147
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	9	36587	41723631	31332	-0.0043
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	9	41832529	41975187	9	-0.9437
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	9	42013107	43552158	39	0.0493
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	9	43575109	44054868	27	-0.3795
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	9	44076786	78956594	6980	-0.0012
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	9	78958130	78967224	32	0.6787
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	9	78975948	78978086	10	0.0397
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	9	78978304	78979747	6	0.4715
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	9	78979896	128653517	35347	0
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	9	128656127	128708552	29	0.3363
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	9	128709171	135152585	3771	0.0083
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	9	135155689	135172469	20	0.3547
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	9	135172606	135818189	398	0.0326
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	9	135818892	135818926	2	1.1941
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	9	135822349	136299481	135	0.0591
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	9	136300458	136364924	26	0.3299
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	9	136368191	138199096	1031	0.04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	9	138200477	138274802	21	0.3433
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	9	138275049	140211215	687	0.0821
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	10	62759	490786	238	0.0491
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	10	495985	540619	39	0.4205
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	10	541086	18069831	14611	0.011
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	10	18100969	18236775	13	0.6112
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	10	18239819	18369824	70	-0.0446
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	10	18370910	18371486	2	-1.2827
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	10	18371998	26189493	5526	0.0072
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	10	26193054	26224703	33	0.3663
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	10	26227489	35571347	6605	0.0054
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	10	35571615	35610842	20	0.3498
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	10	35611437	39116227	2020	-0.007
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	10	41753546	41843467	22	0.4219
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	10	41845130	45576787	2369	0.0037
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	10	45613625	45632493	2	-1.236
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	10	45905767	47417400	378	0.0109
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	10	47432905	47433407	2	-2.0543
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	10	47468066	66976164	12790	-0.0054
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	10	66976282	66984452	29	-0.5459
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	10	66992801	134414283	45923	0.0055
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	10	134416812	134702037	130	0.3113
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	10	134718443	135356694	260	0.0645
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	11	188510	2486738	850	0.0732
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	11	2486855	2573411	38	0.2918
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	11	2574358	4195630	903	-0.0076
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	11	4206589	4293105	28	0.4372
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	11	4303385	44607648	29511	-6e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	11	44608701	44657250	36	0.4537
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	11	44657924	48554998	2070	-0.0109
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	11	48558010	48559252	2	-1.5407
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	11	48562894	55119916	1224	-0.0301
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	11	55130608	55209585	59	-1.8894
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	11	55210152	56013440	551	-0.016
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	11	56017339	56020115	4	-0.945
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	11	56027455	60722052	2850	4e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	11	60741036	60757070	2	1.291
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	11	60772382	64349484	1729	0.0179
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	11	64352248	65027814	239	0.2244
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	11	65029626	65175940	46	0.5332
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	11	65182066	65418654	120	0.2415
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	11	65426675	79645161	7757	0.0079
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	11	79645196	79645212	2	-2.9163
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	11	79645334	106735929	19168	-0.0087
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	11	106743866	106782451	17	-0.3808
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	11	106782541	134449982	19948	0.0116
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	12	20703	6863014	4921	0.0428
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	12	6865078	6900127	17	0.4231
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	12	6900326	8248774	614	0.0055
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	12	8253317	8269518	11	0.7099
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	12	8285095	9525137	644	-0.0053
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	12	9529176	9619559	23	-1.6881
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	12	9626236	34366059	17376	-2e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	12	34371519	34443852	29	0.3772
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	12	34445062	37763594	775	-0.0071
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	12	37767828	37769380	5	-1.183
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	12	37774315	44186092	4108	-0.0065
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	12	44190705	44195804	4	-1.6021
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	12	44199559	132288262	56544	0.0061
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	13	17924949	22530678	2897	0.023
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	13	22530860	22531515	11	-0.5944
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	13	22536195	31046565	6477	0.0111
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	13	31050092	31050153	2	-1.3059
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	13	31054668	32641586	1177	0.0051
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	13	32643642	32664576	37	0.3417
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	13	32665137	35752029	2117	0.0082
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	13	35752362	35752502	2	-1.2419
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	13	35755290	36970036	844	0.0011
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	13	36970224	36982732	14	-0.5804
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	13	36982757	37950811	702	-0.01
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	13	37955572	37956056	2	1.546
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	13	37963057	112562675	49345	-0.0027
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	13	112564922	112784055	123	0.2528
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	13	112784127	113531073	348	0.0102
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	13	113533922	113861952	74	0.2495
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	13	113865115	114126499	118	0.044
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	14	18072124	19044849	71	-0.0114
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	14	19045977	19493212	119	-0.3356
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	14	19494766	23516557	2742	0.058
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	14	23521271	23559278	33	-0.5346
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	14	23563915	40678108	10866	-0.0022
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	14	40680246	40707565	12	-0.6954
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	14	40723727	88901842	30943	-0.0025
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	14	88903888	88904135	2	-1.5554
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	14	88905476	90327528	909	-0.0108
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	14	90327617	90335354	8	0.6218
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	14	90337728	106356482	9866	0.0194
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	15	18276341	28892107	5269	0.0347
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	15	28894134	28895967	2	1.5475
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	15	28896081	74678296	29071	3e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	15	74678566	74682399	14	0.7115
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	15	74682822	75088937	193	-0.0019
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	15	75094456	75132302	16	0.4643
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	15	75132419	100286563	17484	0.0125
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	16	777	2016	3	-0.7061
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	16	25827	5547891	2627	0.0673
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	16	5548090	5548152	2	-1.3973
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	16	5548338	7534959	2454	0.0219
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	16	7535196	7535921	6	-0.742
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	16	7538805	29536176	14125	0.0345
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	16	29538870	30097543	191	0.2836
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	16	30099408	57398385	9761	0.0052
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	16	57399752	57400605	3	-0.9555
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	16	57404352	59113209	1126	0.0018
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	16	59120373	59128720	7	-0.6929
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	16	59131895	68737726	5822	0.0032
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	16	68743639	68768945	8	0.7039
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	16	68770545	72917379	2500	0.0061
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	16	72921524	73028921	25	0.3847
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	16	73029961	77826387	4425	0.0079
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	16	77827360	77832850	7	-0.9782
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	16	77837166	83650960	6077	0.0274
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	16	83651371	83685019	21	0.326
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	16	83685069	85570883	1762	0.02
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	16	85571333	85592742	6	0.8359
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	16	85593861	88815036	1560	0.141
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	17	526	4261275	2337	0.0636
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	17	4262404	4326327	38	0.2946
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	17	4326596	18801260	9240	0.012
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	17	18801488	19092695	48	0.2427
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	17	19092766	36017402	8872	0.0235
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	17	36017582	36017952	3	1.0351
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	17	36018207	40930704	2619	0.0177
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	17	40941880	41004287	4	-1.9081
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	17	41004323	41569943	384	0.0518
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	17	41571141	42139835	137	0.354
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	17	42139861	72850098	18721	0.0087
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	17	72852775	72882063	32	0.4721
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	17	72883316	73922908	592	0.0341
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	17	73926052	73964379	23	0.4887
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	17	73967673	76229956	1277	0.0272
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	17	76230131	76283843	32	0.3706
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	17	76284923	76823702	244	0.0423
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	17	76838090	76861200	14	0.4147
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	17	76861790	77665338	203	0.0602
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	17	77665414	77802538	57	0.2709
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	17	77808053	78643088	424	0.0306
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	18	1543	36512725	22835	4e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	18	36514418	36519387	19	-0.6423
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	18	36522022	40231241	2367	-0.0022
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	18	40231748	40232623	3	-1.079
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	18	40236669	45351487	3511	-0.0011
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	18	45351539	45374393	24	0.4816
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	18	45374428	75504076	21725	-9e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	18	75506719	75507191	3	-2.4601
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	18	75511595	76116029	314	0.1495
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	19	41910	183496	4	0.675
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	19	206564	366625	81	0.0668
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	19	367231	373238	6	0.6801
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	19	388821	402080	7	-0.0171
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	19	413603	489316	22	0.3496
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	19	489487	758592	39	0.0461
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	19	777420	847499	14	0.3893
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	19	847644	1161938	92	0.0581
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	19	1179277	1288376	22	0.4082
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	19	1289237	4382538	892	0.0403
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	19	4383110	4624381	57	0.3142
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	19	4624514	5457457	362	0.0203
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	19	5457659	5461700	5	0.8511
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	19	5464059	7255492	903	0.0439
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	19	7260687	7260964	2	-1.1328
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	19	7264872	8132405	372	0.0139
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	19	8138196	8172439	11	0.4677
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	19	8172580	9134800	522	0.0174
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	19	9135672	9139121	5	-0.8896
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	19	9145760	14388223	2379	0.015
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	19	14389252	14391110	2	1.6156
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	19	14393028	44391205	12974	0.0155
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	19	44396580	44439550	22	0.514
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	19	44440088	46051983	857	0.0135
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	19	46052012	46067859	28	-0.5208
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	19	46072786	48526688	1154	0.0104
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	19	48530593	48648567	62	0.2727
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	19	48649239	54866258	3007	0.0122
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	19	54866574	54869386	9	0.4178
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	19	54880335	62677272	4816	0.05
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	19	62677378	62700207	31	0.421
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	19	62700352	63569257	501	0.0266
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	19	63570038	63789666	105	0.2881
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	20	9305	1508562	1202	0.0434
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	20	1508787	1530207	41	0.4288
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	20	1538257	4746942	2380	0.0282
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	20	4747336	4798333	43	0.2966
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	20	4798783	37467877	20795	0.0045
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	20	37472405	37475460	3	-1.1785
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	20	37479542	57730863	15116	0.0123
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	20	57734034	57749009	10	-0.84
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	20	57749573	61692902	2597	0.0305
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	20	61693101	62426597	310	0.2545
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	21	9758742	10030012	74	-0.4591
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	21	10030151	39841110	19266	-0.0053
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	21	39841927	39876578	48	0.2708
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	21	39880302	39882854	4	0.8611
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	21	39884232	39919993	29	0.2565
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	21	39922223	41790001	1738	0.0019
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	21	41790065	41790083	2	-1.7724
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	21	41790207	46921385	3243	0.0543
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	22	14432528	15530162	181	0.009
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	22	15531216	15546276	5	-0.6736
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	22	15551021	16435605	597	0.0148
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	22	16438748	16438885	2	1.425
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	22	16442891	20051720	2078	0.1543
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	22	20055998	20170595	29	0.5979
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	22	20170674	20175355	9	-0.6437
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	22	20247153	21904494	1231	0.1065
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	22	21907112	21907589	2	-2.7727
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	22	21911302	22613016	457	0.0796
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	22	22613098	22615809	3	1.182
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	22	22618367	26420252	3368	0.0258
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	22	26420448	26461706	50	0.248
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	22	26463974	32503406	3905	0.0051
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	22	32504947	32504973	3	-1.0997
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	22	32504985	34305149	1606	7e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	22	34305162	34370110	56	0.2645
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	22	34370400	39475550	2814	0.0263
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	22	39477271	39484817	6	-1.1641
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	22	39496838	40647057	718	-0.0097
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	22	40647871	40701500	31	0.4713
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	22	40705250	41106912	220	0.0086
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	22	41111567	41227226	64	0.3209
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	22	41229384	41264406	21	0.7035
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	22	41272906	41311111	16	0.2878
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	22	41312516	49581321	6094	0.0522
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	X	108477	3981930	869	0.0661
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	X	3983743	3992130	12	0.5798
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	X	3992274	4931915	813	0.0158
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	X	4932196	4932943	2	-2.0802
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	X	4936528	15637161	8014	0.0107
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	X	15637898	15641261	3	-3.1951
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	X	15644806	19369264	2081	0.022
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	X	19369852	19457581	59	0.3371
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	X	19460938	78817546	29246	-0.0036
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	X	78818006	78818656	3	-1.8217
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	X	78819029	106017647	14705	-0.0071
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	X	106018271	106020942	3	-2.9799
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	X	106022656	111423303	2927	0.0018
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	X	111423598	111423610	2	-1.879
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	X	111424579	112641933	749	-0.0056
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	X	112642404	112642982	5	-2.4025
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	X	112643187	154835548	25061	0.0039
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	Y	2710438	18536944	5834	-0.9651
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	Y	18541639	18600794	29	-0.5705
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	Y	18603437	24562121	2001	-0.9791
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	Y	24568390	24648044	29	-0.4143
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	Y	24650701	26130505	265	-0.9607
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	Y	26133162	26209230	30	-0.4936
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_B12_801984	Y	26212556	57427647	402	-0.9847
