Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	1	3208470	95447298	53133	0.0037
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	1	95449099	95449106	2	-1.6155
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	1	95452712	245880329	75821	0.0017
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	2	474222	242124735	131199	0.0059
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	3	526235	191606647	103021	0.0013
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	3	191606916	191607960	2	-1.7552
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	3	191609554	199023074	3283	1e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	4	1043934	189836143	102635	-9e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	5	967233	180293075	100416	0.0012
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	6	959281	146332480	81753	-2e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	6	146338619	146357382	6	-1.0541
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	6	146358041	156792091	7198	-0.0041
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	6	156795841	156796277	2	1.4395
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	6	156796298	170745844	7431	0.0016
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	7	671810	158077879	81263	-8e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	8	607667	145304484	81469	-7e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	9	779932	140058573	67967	6e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	10	405240	135075077	80803	0
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	11	446120	106954232	59162	0.0029
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	11	106958841	106959291	2	-1.5549
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	11	106959737	133647740	18036	-1e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	12	760163	131671419	73881	4e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	13	18348806	114005560	56591	4e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	14	19571208	105059083	49397	0.0029
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	15	21238778	93485766	40697	0.0039
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	15	93488450	93488951	3	-1.2848
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	15	93490073	99701830	3788	0.0064
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	16	593460	87907437	40846	1e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	17	933971	78510305	36959	0.0012
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	18	319586	75210228	42628	0.0012
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	19	235018	50440084	18627	-0.0015
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	19	50440194	50441095	2	-2.0685
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	19	50448216	63570038	5307	0.0019
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	20	403764	60787678	36968	0.0059
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	20	60788088	60792299	2	-1.7618
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	20	60792463	61690281	287	0.0029
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	21	14269492	46503202	20566	0.0014
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	22	15803930	47717016	16920	0.0057
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	X	3167107	69412222	26672	0.001
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	X	69413355	69415404	3	-3.4778
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	X	69415421	154558783	36939	0.0046
