Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	1	3218610	95674710	53193	0.0038
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	1	95676511	95676518	2	-1.6155
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	1	95680124	247813706	75815	0.0017
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	2	484222	242476062	131191	0.006
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	3	2212571	190123953	103015	0.0013
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	3	190124222	190125266	2	-1.7552
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	3	190126860	197538677	3283	1e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	4	1053934	188763651	102640	-9e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	5	914233	180360469	100416	0.0012
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	6	1014281	146290787	81762	-2e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	6	146296926	146315689	6	-1.0541
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	6	146316348	156750399	7198	-0.0041
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	6	156754149	156754585	2	1.4395
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	6	156754606	170903919	7431	0.0016
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	7	705284	158385118	81264	-8e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	8	617667	145232496	81476	-7e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	9	789932	140938752	67979	6e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	10	415240	135225087	80801	-1e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	11	456120	107449022	59153	0.0029
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	11	107453631	107454081	2	-1.5549
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	11	107454527	134142530	18035	-1e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	12	889902	133161346	73876	4e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	13	19450806	114987458	56587	4e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	14	20501368	105988038	49395	0.0029
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	15	23687685	95684762	40696	0.0039
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	15	95687446	95687947	3	-1.2848
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	15	95689069	101884307	3787	0.0064
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	16	653459	76511488	31903	-0.0012
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	16	76514306	76514378	2	1.7715
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	16	76515641	89379936	8877	0.004
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	17	987221	80917016	36959	0.0012
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	18	329586	77109240	42625	0.0012
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	19	284018	45748244	18627	-0.0015
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	19	45748354	45749255	2	-2.0685
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	19	45756376	58878226	5307	0.0019
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	20	455764	61317233	36971	0.0059
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	20	61317643	61321854	2	-1.7618
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	20	61322018	62219837	287	0.0029
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	21	15347621	47678774	20565	0.0014
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	22	17423930	49331012	16919	0.0057
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	X	3157107	69495497	26680	0.001
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	X	69496630	69498679	3	-3.4778
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C02_802006	X	69498696	154905589	36948	0.0047
