Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	1	61735	12909977	6560	0.3072
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	1	12910597	12927107	6	1.3392
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	1	12927856	13431652	25	0.2203
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	1	13444502	13471704	7	-0.5735
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	1	13471945	16149915	1818	0.3112
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	1	16153497	16153925	6	-1.9794
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	1	16154201	16830820	300	0.3679
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	1	16831863	17005734	48	-0.0937
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	1	17005776	17048405	36	0.4823
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	1	17048479	17209603	29	-0.0019
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	1	17210652	17245213	22	0.4003
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	1	17245530	17247673	5	1.1578
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	1	17247727	17277940	33	0.3625
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	1	17282425	56905802	22757	-0.1852
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	1	56906274	56968477	44	-0.9515
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	1	56968755	72763370	11308	-0.1607
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	1	72768418	72811148	48	1.0066
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	1	72811904	106019310	20993	-0.2675
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	1	106019370	106022375	14	-1.2353
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	1	106024055	110227515	2657	-0.42
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	1	110232974	110240178	17	0.8169
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	1	110242953	112696193	1956	-0.447
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	1	112696273	112697198	18	0.1941
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	1	112697213	117676728	3223	-0.4271
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	1	117678959	117732171	52	0.0789
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	1	117738815	118054772	171	-0.3973
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	1	118058235	148585337	2883	0.0588
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	1	148627569	148627842	3	-1.8687
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	1	148636769	152555527	1696	0.1292
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	1	152555706	152573416	22	1.0005
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	1	152575249	175013165	15199	0.1328
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	1	175019365	175019696	3	-1.9676
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	1	175020306	199111972	16011	0.1387
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	1	199112471	199113011	3	-1.3463
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	1	199113840	229811169	20493	0.0326
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	1	229816856	229820196	3	-2.6078
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	1	229820456	249224388	14053	-0.0113
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	2	12784	8118123	6285	0.1168
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	2	8118171	8120500	5	-0.8967
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	2	8122710	18794610	7826	0.002
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	2	18796230	19225434	267	-0.4974
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	2	19225448	52754468	22787	-0.0777
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	2	52754480	52781542	39	0.5269
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	2	52787949	63215474	6854	-0.0828
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	2	63216407	63465051	80	-0.3714
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	2	63467132	65099452	945	-0.0515
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	2	65101579	65101920	2	-1.7923
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	2	65103814	87124134	14103	-0.0901
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	2	87128201	87309263	15	-0.8243
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	2	87309834	98118212	2063	0.0242
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	2	98140747	98162189	9	-0.9267
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	2	98166878	106874649	5578	0.2045
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	2	106874722	106883229	6	-0.6935
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	2	106883331	106885357	7	-2.5319
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	2	106887255	146861386	23928	0.1768
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	2	146861404	146866934	27	0.7707
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	2	146877806	180061655	20284	0.2284
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	2	180067192	180079144	3	-2.3619
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	2	180083591	184577193	2865	0.2381
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	2	184577248	184577324	2	-1.3736
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	2	184580895	184602735	35	0.2174
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	2	184602895	184603603	5	-0.9679
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	2	184603704	193744015	5260	0.2391
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	2	193745041	193765385	14	-0.288
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	2	193766129	194219732	204	0.2849
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	2	194222002	194274955	30	0.0313
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	2	194277245	205840296	6593	-0.4289
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	2	205840388	205844259	2	-2.9105
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	2	205844946	207569803	1131	-0.4453
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	2	207570122	207574567	2	-3.3893
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	2	207574944	243089456	22619	-0.4737
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	3	60345	6646543	5832	-0.3294
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	3	6651128	6655078	24	-1.9004
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	3	6655248	26601100	14165	-0.3058
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	3	26601760	26611961	11	-1.2756
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	3	26612027	33041124	4462	-0.2637
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	3	33042601	33048821	5	-2.0143
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	3	33050701	60008309	16173	-0.2782
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	3	60009173	60110558	140	-1.1886
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	3	60110586	60441341	339	-0.3501
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	3	60441455	60504260	86	-2.2247
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	3	60505004	84698834	16463	-0.2923
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	3	84698857	84724904	32	0.2344
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	3	84725973	96371187	4574	-0.2895
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	3	96376791	96377280	2	-2.3404
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	3	96377612	107033464	6201	-0.2671
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	3	107035798	107039461	3	-2.6298
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	3	107043012	129761124	13941	-0.2842
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	3	129762859	129806052	52	0.0763
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	3	129806236	131706696	1173	-0.2879
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	3	131708157	131708471	2	-2.2093
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	3	131714999	135901429	2815	-0.2806
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	3	135901782	136589382	237	0.0555
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	3	136596441	136601720	4	-2.8458
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	3	136604395	148962976	7675	0.0431
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	3	148963395	148971304	28	-2.0135
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	3	148971707	162508192	8332	0.0617
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	3	162508268	162626572	72	-0.913
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	3	162626603	162714517	71	0.0999
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	3	162717727	162719562	2	-2.6578
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	3	162726159	186698098	14603	0.056
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	3	186700837	186700923	2	-2.4487
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	3	186708804	187930513	972	0.0648
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	3	187931652	188603748	480	-2.2959
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	3	188613929	192880587	3053	0.0472
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	3	192880726	192882903	11	-0.6938
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	3	192886435	195399075	1489	0.053
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	3	195400799	195455876	28	0.5397
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	3	195455911	197896002	1188	0.0329
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	3	197896017	197896118	2	-1.8437
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	4	12281	7735513	4562	-0.5477
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	4	7739468	7902903	111	-2.3793
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	4	7907013	10223416	1102	-0.5352
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	4	10223628	10236142	35	-1.6608
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	4	10238436	16413300	4872	-0.472
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	4	16414641	16418656	3	-2.3959
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	4	16420643	16485615	48	-0.5472
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	4	16486243	16488439	2	-2.6027
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	4	16488917	25641169	6302	-0.4895
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	4	25662067	25669764	5	-2.394
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	4	25670336	34786955	5717	-0.4732
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	4	34786990	34819211	33	-0.0019
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	4	34821340	37968225	2218	-0.4477
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	4	37968562	37972041	2	-2.152
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	4	37974138	38070678	68	-0.4498
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	4	38070899	38070939	2	-2.5037
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	4	38075253	49309854	6683	-0.4494
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	4	49503166	49658612	19	0.4111
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	4	52685699	64707605	7578	-0.4839
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	4	64707754	64708258	6	-1.9495
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	4	64716431	98709930	20767	-0.4379
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	4	98714323	98789542	28	-1.5305
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	4	98795225	123756537	14996	-0.4344
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	4	123759178	123889244	89	-0.0625
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	4	123889757	139604851	9125	-0.4581
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	4	139605006	139606642	2	-3.2724
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	4	139608671	168345995	17691	-0.4528
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	4	168347037	168353318	4	-2.5618
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	4	168353545	172987928	2997	-0.4497
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	4	172989148	172989533	12	0.3255
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	4	172995979	173422522	231	-0.4854
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	4	173424947	173425227	3	1.7853
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	4	173428342	174052015	334	-0.3995
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	4	174061455	174061857	2	-2.2172
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	4	174062119	189505454	10641	-0.4972
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	4	189505805	189505920	2	-3.5989
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	4	189506528	191027923	881	-0.5521
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	5	15532	34031101	23659	0.139
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	5	34034813	34087506	29	-0.6215
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	5	34089289	46271108	7105	0.1672
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	5	46271930	46273502	6	-2.38
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	5	46278212	49678131	93	0.1433
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	5	49689091	49690651	2	-1.5801
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	5	49691275	54944262	3323	0.1653
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	5	54944270	54948733	2	-1.6504
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	5	54949189	58466678	2578	0.1789
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	5	58468591	59928948	938	-0.4584
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	5	59930655	59986847	21	-1.5733
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	5	59989842	112380627	30629	-0.4664
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	5	112383275	114756455	1707	0.2921
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	5	114756637	114756862	5	-0.5198
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	5	114759078	128645070	9253	0.3151
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	5	128645154	128651108	2	-1.2269
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	5	128651624	150199238	13167	0.2568
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	5	150202205	150218604	9	-0.6207
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	5	150223387	151514171	961	0.244
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	5	151515386	151518351	14	-3.0695
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	5	151520271	156060343	3076	0.2175
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	5	156061580	160707201	3227	-0.4795
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	5	160711495	175460087	10461	0.2024
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	5	175465689	175470324	3	-2.196
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	5	175477120	177198449	728	0.2281
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	5	177227551	177232605	3	2.9483
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	5	177254965	177391446	24	0.1465
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	5	177391977	177400868	6	-2.3484
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	5	177401382	180790320	1973	0.1602
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	6	149661	13201565	10416	-0.5004
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	6	13201893	13243086	42	-2.7873
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	6	13244786	26718131	9763	-0.4967
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	6	26728640	26823026	46	-0.0578
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	6	26823560	31172655	2015	-0.4897
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	6	31176039	31280823	82	1.6446
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	6	31286276	31295953	8	-0.2868
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	6	31295987	32431292	505	1.6106
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	6	32431552	32580617	47	0.7784
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	6	32581838	32602107	12	2.8179
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	6	32602269	32626618	14	0.269
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	6	32650612	33175824	355	1.1315
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	6	33178010	40684323	4930	-0.4858
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	6	40690624	44945717	2538	1.21
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	6	44952209	45991252	668	0.1979
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	6	45991518	45993795	2	-1.7507
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	6	45993918	57250760	7244	0.2248
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	6	57251888	58082951	329	-0.4633
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	6	58140300	58726424	232	0.1533
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	6	58726538	62206718	109	-0.4525
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	6	62234532	62241785	19	0.1877
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	6	62241902	66787526	2636	-0.4685
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	6	66788341	66989044	119	0.2125
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	6	66989058	67008286	15	-0.2543
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	6	67009023	67049406	56	-2.4138
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	6	67049599	67069399	22	0.1262
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	6	67070064	67072544	3	-0.8257
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	6	67075389	67676442	482	0.1895
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	6	67680231	67680289	2	-1.8394
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	6	67680329	76153450	5491	0.1494
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	6	76155724	76160101	6	-4.0516
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	6	76160725	103738289	17368	0.1387
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	6	103738314	103762061	40	-1.0883
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	6	103765470	121425427	10865	0.1919
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	6	121425543	121425889	2	-1.7201
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	6	121427165	123776893	1330	0.2164
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	6	123780321	123780446	2	-1.5484
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	6	123780979	134266268	6877	0.2469
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	6	134269071	134269632	2	-1.6353
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	6	134272072	154364440	13479	0.2404
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	6	154365074	154365969	2	-1.844
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	6	154367080	168800537	10120	0.1934
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	6	168803216	168803456	2	-1.6213
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	6	168804088	171051005	1543	0.1691
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	7	43355	71276	32	0.6906
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	7	79263	9098664	5333	0.3914
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	7	9098815	9114398	11	-0.2321
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	7	9117417	9984100	693	0.3869
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	7	9988147	9989168	3	-1.0835
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	7	9994840	38265380	21331	0.4153
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	7	38266350	38328994	58	0.6957
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	7	38329044	48580942	6834	0.4036
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	7	48581852	48591885	7	-0.9589
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	7	48592025	53478663	3607	0.4055
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	7	53479719	53479734	2	-1.0928
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	7	53480678	54380373	644	0.4017
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	7	54386505	54386517	6	-0.7475
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	7	54393488	72455684	7513	0.3335
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	7	72455743	72458513	3	-1.1421
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	7	72458587	86940803	8022	0.4389
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	7	86941669	86946888	2	-1.2359
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	7	86948227	105098306	10411	0.4228
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	7	105099355	105104813	4	-0.5707
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	7	105112489	109433777	2845	0.4568
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	7	109433785	109437093	4	-0.5798
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	7	109437094	110175099	524	0.3619
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	7	110175148	110505005	237	-0.066
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	7	110505223	135088782	15034	0.5068
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	7	135097716	135254877	101	-0.4376
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	7	135259170	158345769	14703	0.4047
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	7	158346726	158385232	18	0.7983
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	7	158385584	158392786	4	1.4472
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	7	158392964	158591954	153	0.4476
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	7	158592431	158593039	2	-1.6324
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	7	158600277	158933239	225	0.2965
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	7	158943746	159127004	119	-0.1394
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	8	31254	593041	323	-0.559
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	8	594944	595908	10	1.6918
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	8	601043	3784187	3085	-0.5916
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	8	3787060	3791218	24	-1.497
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	8	3791265	24974476	18325	-0.5046
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	8	24974522	24984141	21	-2.1613
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	8	24984156	39246675	8999	-0.4797
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	8	39247111	39368908	48	-1.2671
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	8	39370474	53015682	5837	-0.5021
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	8	53017101	56711983	2487	0.1724
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	8	56717146	89696572	19892	0.4863
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	8	89707279	89780900	44	-0.5591
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	8	89790488	112294646	13775	0.5025
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	8	112294670	112295245	5	-1.831
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	8	112295260	146298155	22935	0.4793
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	9	46587	2147099	2323	0.3289
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	9	2148837	2150662	6	-0.9543
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	9	2152115	6695986	4058	0.354
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	9	6701145	6708357	7	-0.6934
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	9	6712314	23361805	14049	0.3549
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	9	23363115	23373484	8	-1.8262
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	9	23378488	97704145	30293	0.34
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	9	97707727	97909030	138	0.9485
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	9	97921731	102743283	3206	0.3358
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	9	102748466	102791539	25	-0.2151
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	9	102798218	141091394	25794	0.3431
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	10	72759	158946	36	0.0809
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	10	159076	2848009	2206	-0.5448
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	10	2849271	2849459	3	1.3552
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	10	2849547	7098419	3884	-0.4642
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	10	7105508	7106377	3	-2.9028
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	10	7107338	30081136	17161	-0.4905
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	10	30086037	30509184	383	2.6295
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	10	30511016	30660086	76	-0.4562
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	10	30663709	31317461	528	2.7434
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	10	31317824	35107492	2553	1.4195
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	10	35107680	36327379	719	1.0665
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	10	36329576	39070670	1529	0.237
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	10	39070808	39074821	4	-0.8397
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	10	39076206	46691159	2403	0.2436
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	10	46691480	46954498	11	-0.761
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	10	46954524	47771030	357	0.1321
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	10	47897394	47913401	3	-1.9655
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	10	47948060	57180116	5710	0.2708
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	10	57180153	57180321	5	-1.2239
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	10	57180540	61507279	3170	0.3024
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	10	61508784	74740598	8857	-0.4649
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	10	74741142	75057739	126	0.6745
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	10	75058357	76252832	484	0.9518
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	10	76255443	77708978	812	-2.088
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	10	77713956	88645181	7947	-0.5149
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	10	88646324	88682555	23	-1.7094
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	10	88689402	92781170	2800	-0.4281
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	10	92781474	92782367	3	-2.1404
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	10	92782524	112365239	12267	-0.4668
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	10	112371093	133544194	15882	0.2712
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	10	133545170	135506704	924	-0.5298
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	11	198510	4967396	2474	-0.132
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	11	4967650	4976892	43	0.5055
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	11	4976907	5208018	191	-0.1117
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	11	5208174	5208499	4	1.1909
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	11	5209370	5787405	589	-0.1176
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	11	5788080	5816186	36	-0.5052
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	11	5816232	24444249	13836	-0.0989
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	11	24446368	24455176	6	-1.7188
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	11	24458306	33914428	6365	-0.1124
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	11	33914922	33915891	4	-1.5805
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	11	33917017	73948799	20659	-0.111
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	11	73954798	74024257	49	0.5286
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	11	74025289	74026228	2	-1.2978
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	11	74029530	79967513	3721	0.3883
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	11	79967548	79967564	2	-2.8565
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	11	79967686	81503468	1320	0.396
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	11	81503992	81517158	10	-4.4277
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	11	81522632	102424333	14512	0.4177
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	11	102424628	102424630	2	-2.2383
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	11	102424802	130102493	19482	0.3922
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	11	130110703	134944770	3786	-0.1535
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	12	150442	565425	225	-0.1761
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	12	567046	570947	2	-2.0766
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	12	573434	9633870	5974	-0.1253
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	12	9637909	9713674	21	-1.3513
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	12	9714954	11212791	1040	-0.095
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	12	11214145	11241532	16	-1.1094
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	12	11251874	31269298	14177	-0.088
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	12	31278031	31395472	84	0.2303
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	12	31395843	37987726	2176	-0.0865
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	12	38012567	38014018	2	-2.2263
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	12	38034358	133778189	61278	-0.0478
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	13	19026949	38067575	13539	-0.0724
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	13	38070044	38084321	16	0.5771
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	13	38084543	72476988	21563	0.0205
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	13	72477555	72480605	5	1.3309
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	13	72486483	78475313	4277	0.0734
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	13	78475481	83164534	2998	0.3982
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	13	83168967	83170678	2	-2.7228
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	13	83172655	115105786	21850	0.4207
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	13	115106996	115108397	2	-0.2424
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	14	19002124	37202713	11073	0.0806
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	14	37204131	37423566	217	-0.4312
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	14	37423627	74001123	23013	0.0037
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	14	74006707	74020979	8	-1.6634
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	14	74029900	106538062	20803	0.0543
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	14	106541753	106569463	14	1.0077
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	14	106574118	106777343	100	0.115
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	14	106783044	106802053	8	0.8266
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	14	106815943	106874361	33	0.2215
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	14	106879831	106918069	49	-0.9366
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	14	106918094	107285437	226	0.0501
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	15	20016328	65413870	27587	-0.2038
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	15	65414065	76891627	6723	0.2833
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	15	76891741	76895775	19	-2.259
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	15	76902179	83083432	3664	0.2751
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	15	83108458	83108839	2	-1.9551
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	15	83169549	97808074	10574	0.2543
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	15	97808409	97833652	15	-0.72
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	15	97844990	102469040	3427	0.226
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	16	60777	18198717	12794	-0.0748
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	16	18228118	18238289	2	-2.2552
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	16	18242726	19944363	727	-0.08
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	16	19945650	19965875	28	-0.8142
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	16	19967362	55795214	13760	-0.1036
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	16	55796389	55822397	21	-0.973
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	16	55822444	55842382	5	0.0496
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	16	55842456	55847821	7	0.6787
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	16	55848068	78371608	14405	-0.1258
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	16	78372440	78384765	17	0.4215
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	16	78385001	78573963	298	-0.2849
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	16	78574556	84952753	6871	0.0626
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	16	84952932	84952943	2	-1.9354
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	16	84952982	90287535	3467	0.0464
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	17	526	18278531	11375	-0.5099
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	17	18278612	18950867	237	-0.1878
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	17	18965222	19015652	5	0.783
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	17	19030156	19515061	213	-0.1058
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	17	19518283	20000093	286	-0.4567
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	17	20004952	21474289	608	-0.1449
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	17	21477343	22219568	257	-0.4793
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	17	22227075	41432265	9077	-0.0931
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	17	41438590	41439921	3	-1.854
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	17	41443704	44212428	1434	-0.1384
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	17	44213204	44344893	80	0.4031
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	17	44345038	81049726	21649	-0.0908
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	18	11543	8267748	5948	0.2866
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	18	8270693	8320922	49	-0.5058
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	18	8323564	40056569	18062	0.3092
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	18	40056601	40057767	24	-0.5359
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	18	40058395	51524842	7899	0.3663
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	18	51524999	51525152	2	-1.6145
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	18	51528368	62211626	7324	0.3795
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	18	62211946	62217927	3	-1.1987
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	18	62218000	63906866	1193	0.3561
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	18	63907434	63911876	11	-0.5346
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	18	63912142	66746887	2071	0.3603
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	18	66750937	66750952	2	-1.7017
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	18	66751045	70919779	3055	0.3777
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	18	70923247	70950081	23	-0.2125
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	18	70950125	78015057	5121	0.3363
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	19	90910	24596750	11261	0.1549
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	19	27747993	29672808	1216	-0.5824
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	19	29676010	29681993	9	2.3375
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	19	29688313	29980962	259	1.5462
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	19	29981029	30403440	311	2.1249
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	19	30403957	30412555	12	1.2822
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	19	30413188	30530935	75	1.7682
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	19	30531050	30756075	142	1.4725
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	19	30756118	31284806	385	0.5448
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	19	31288118	31288540	2	1.6369
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	19	31290599	32189097	687	0.4955
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	19	32191642	32192692	5	-0.4598
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	19	32193147	32636323	369	0.5226
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	19	32636763	32637728	4	0.1592
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	19	32639960	33516441	515	-0.5012
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	19	33521146	34764640	858	-0.1436
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	19	34775358	35289872	319	-0.4869
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	19	35292847	37753239	1351	-0.1361
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	19	37753941	37795110	7	-1.2162
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	19	37795791	41352639	1845	-0.1224
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	19	41352657	41375966	31	-0.9616
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	19	41376019	52131813	5281	-0.0927
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	19	52142352	52148197	11	-1.0535
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	19	52154905	59097854	4384	-0.1539
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	20	61305	1547885	1178	0.5148
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	20	1548016	1560999	28	0.0846
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	20	1561580	1598336	44	1.1967
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	20	1599002	5010811	2515	0.5184
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	20	5016926	5016931	2	-2.0193
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	20	5021144	15144763	7773	0.4797
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	20	15150730	15181397	29	0.0402
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	20	15181590	18043927	2618	0.442
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	20	18050076	18444056	292	1.3435
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	20	18449249	30036940	5753	0.7513
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	20	30040510	30048872	6	-0.549
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	20	30052905	33013855	1467	0.7033
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	20	33016334	33094564	31	0.2162
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	20	33098114	38034463	2730	0.6962
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	20	38038991	38046568	5	-0.1654
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	20	38046933	52283186	10234	0.715
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	20	52285835	52285882	2	-1.2929
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	20	52296775	56669386	3652	0.7109
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	20	56669979	56670607	3	1.8752
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	20	56670829	62956153	4138	0.6648
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	21	10736871	14456416	133	-0.2609
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	21	14464379	48096957	24265	0.1518
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	22	16052528	16504292	79	0.2656
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	22	16504357	18298527	844	-0.1502
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	22	18305797	22833461	2764	0.3494
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	22	22833756	24330218	928	-0.1684
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	22	24330269	24331967	2	-3.081
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	22	24332625	24344422	5	-0.4782
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	22	24350529	24402442	22	0.4556
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	22	24402461	25661698	818	-0.1093
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	22	25663985	25918709	284	-1.3179
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	22	25922342	28354894	2370	-0.1421
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	22	28355418	28847975	292	-0.4591
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	22	28859067	29850959	559	0.6063
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	22	29854873	35247901	3933	0.1657
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	22	35248527	35257359	3	0.6941
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	22	35258360	41889402	3975	-0.101
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	22	41889619	45123977	2182	-0.511
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	22	45124350	45136635	8	-1.7048
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	22	45136906	47757314	1797	-0.5494
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	22	47766183	51234455	2664	0.0892
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	X	168477	7041415	3444	-0.0802
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	X	7043447	7287458	155	-0.7696
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	X	7290562	7355772	51	-1.5301
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	X	7359845	7377080	16	-0.4071
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	X	7383909	7458596	62	-1.5689
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	X	7458791	7561716	87	-0.1379
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	X	7561867	7817775	144	-1.0563
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	X	7819527	7822233	4	0.1295
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	X	7827516	7839266	18	-0.5561
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	X	7839976	8789654	735	0.1919
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	X	8790633	47962600	24493	-0.1293
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	X	47962767	47979657	10	-0.8811
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	X	47980874	55701259	3098	-0.1609
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	X	55702659	55703315	2	-3.1644
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	X	55707556	55714337	3	-0.8016
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	X	55719106	73056581	6258	-0.2261
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	X	73057223	89895299	8694	0.2328
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	X	89903298	89903498	4	-1.0524
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	X	89903526	96048795	3251	0.1652
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	X	96052520	96759595	403	-0.4651
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	X	96763822	154385156	33403	0.151
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	X	154392382	154401744	5	-1.7747
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	X	154408127	155182354	237	0.1979
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	Y	2650438	2974832	148	-2.8165
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	Y	2974958	6101425	724	-2.2598
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	Y	6107901	6296423	85	-3.6997
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	Y	6299046	6532106	75	-2.7115
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	Y	6537454	6583358	10	-0.9621
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	Y	6588027	7399842	383	-2.7933
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	Y	7400746	9759564	1203	-3.1366
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	Y	9774614	15590276	951	-2.8533
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	Y	15590342	15594523	3	-7.5522
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	Y	15594889	19504799	2055	-2.9623
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	Y	19509909	21088297	731	-3.4835
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	Y	21088485	24510518	1243	-2.9951
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	Y	24514859	26218232	323	-3.5009
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	Y	26222820	26408766	43	-2.8552
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	Y	26409789	26417092	4	-4.9402
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	Y	26417501	26510575	33	-2.5408
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	Y	26510799	27436702	96	-3.9007
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	Y	27444915	27529084	33	-2.3035
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	Y	27535030	27600323	21	-3.5209
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	Y	27601827	27720551	37	-2.3932
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	Y	27721084	28423938	251	-3.5112
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C04_801934	Y	28438116	59018259	183	-2.7134
