Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	1	3218610	247813706	129031	-0.0186
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	2	484222	34136108	20237	-0.0204
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	2	34136251	34136723	3	-1.7105
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	2	34137242	46365920	7053	-0.017
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	2	46366086	46368296	2	-1.6805
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	2	46368319	57323977	5974	-0.0338
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	2	57324677	57332673	2	-1.8043
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	2	57334077	120322438	29470	-0.0234
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	2	120323966	120327354	2	-1.6058
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	2	120327799	122478623	1139	-0.0213
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	2	122479139	122479609	4	-1.5489
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	2	122482142	129541542	3441	-0.0399
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	2	129542628	129573674	31	0.4001
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	2	129574782	226186808	54342	-0.0283
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	2	226189194	226196123	12	-0.783
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	2	226199558	242476062	9484	-0.0136
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	3	2212571	59705135	33385	-0.0282
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	3	61026351	61305960	251	0.4047
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	3	61305975	155549853	51437	-0.0329
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	3	155549856	155563797	5	-1.2072
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	3	155564156	162807160	3717	-0.0404
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	3	162807356	162810726	2	-2.0126
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	3	162813497	168791080	2663	-0.0251
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	3	168797063	169294522	375	-0.8282
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	3	169298298	197538677	14472	-0.0207
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	4	1053934	91050180	49889	-0.0316
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	4	91050684	91178264	87	0.4453
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	4	91193694	115450219	13504	-0.0329
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	4	115453797	115454122	2	-1.87
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	4	115455045	135780220	10440	-0.0385
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	4	135780385	135780487	3	-1.6825
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	4	135785349	188763651	28731	-0.0324
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	5	914233	73410192	38776	-0.0293
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	5	73414811	73415084	2	-2.2265
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	5	73415533	74919409	850	0.0062
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	5	74920509	74924442	2	-1.584
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	5	74924890	180360469	60796	-0.0355
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	6	1014281	159918694	90754	-0.0307
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	6	159925359	159936705	11	-0.9336
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	6	159942751	159947482	3	0.5415
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	6	159947617	159962803	21	-0.8777
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	6	159963710	170903919	5616	-0.0347
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	7	705284	1303061	100	0.4823
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	7	1311237	1360243	16	-0.9939
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	7	1375892	158385118	81155	0.4262
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	8	617667	42933372	24641	-0.8198
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	8	47460945	52464713	2443	0.3939
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	8	52465778	52466355	3	-1.8895
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	8	52466713	55647912	1851	0.4123
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	8	55654711	55654888	2	-2.0248
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	8	55656582	88516183	18678	0.4129
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	8	88524741	88526229	2	-2.8765
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	8	88529268	145232496	33753	0.4194
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	9	789932	10523295	5752	-0.0324
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	9	10523383	10524041	3	-1.6437
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	9	10524292	18367074	4986	-0.0154
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	9	18371916	18372565	2	-1.7424
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	9	18374849	27955871	6511	-0.0344
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	9	27957184	27959885	2	-1.7014
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	9	27960365	37033159	4911	-0.0243
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	9	37033361	37034617	2	-2.3329
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	9	37034669	140938752	45818	-0.0182
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	10	415240	135225087	80814	-0.0216
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	11	456120	104317661	57327	-0.0201
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	11	104321634	104342438	15	-0.6722
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	11	104346774	127135173	15235	-0.0213
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	11	127146088	127232888	90	-0.7696
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	11	127240140	130407520	2225	-0.0038
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	11	130410414	130977407	303	-0.8272
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	11	130987535	134142530	2004	-0.0327
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	12	889902	29308021	16843	-0.0191
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	12	29310161	29310302	2	-2.4317
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	12	29320763	80826090	26785	-0.0368
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	12	80827595	80828113	2	-6.9771
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	12	80828718	89426927	4826	-0.0511
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	12	89430045	89433593	3	-2.0521
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	12	89435177	131271418	24650	-0.0374
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	12	131272228	131272250	2	-2.3373
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	12	131277031	133161346	726	-0.0578
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	13	19450806	76521634	32695	-0.0241
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	13	76521824	76521954	2	-1.7748
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	13	76523209	91144682	8447	-0.0432
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	13	91151095	91151564	3	-1.3283
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	13	91152045	93575720	1532	-0.0548
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	13	93577637	93582565	4	-1.4084
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	13	93583227	114987458	13910	-0.0321
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	14	20501368	72049160	28528	-0.0189
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	14	72051764	72052868	2	-1.8827
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	14	72053097	75132265	1921	-0.0251
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	14	75135161	75139621	2	-1.6337
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	14	75144880	97688238	14553	-0.0163
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	14	97692568	97693922	2	-1.6528
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	14	97698364	105988038	4394	-0.0149
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	15	23687685	48240307	12310	-0.0106
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	15	48241022	48241193	2	-1.7714
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	15	48244146	90634347	25313	-0.0065
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	15	90636194	90704489	41	0.4445
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	15	90706720	101884307	6830	-0.02
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	16	653459	79197958	34139	-0.0266
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	16	79199110	79231257	48	0.4224
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	16	79232446	89379936	6592	-0.0087
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	17	987221	37846385	15203	-0.0071
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	17	37848533	37848545	2	-2.1594
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	17	37853497	80917016	21765	-0.005
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	18	329586	77109240	42618	-0.0228
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	19	284018	28959499	9548	-0.0137
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	19	28960294	28960897	2	-1.5746
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	19	28964147	58878226	14399	-0.0142
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	20	455764	62219837	37270	-0.0091
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	21	15347621	47678774	20566	-0.0155
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	22	17423930	49331012	16920	-0.0031
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C06_802068	X	3157107	154905589	63642	0.0103
