Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	1	61735	10371838	5207	0.0437
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	1	10374270	10374600	2	-1.7883
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	1	10377243	16970000	3551	0.0275
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	1	16970178	17112177	60	0.2848
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	1	17114427	72768498	34221	0.0244
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	1	72768916	72811133	45	0.8585
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	1	72811148	76050844	1932	1e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	1	76054763	76054854	2	-2.8482
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	1	76059509	104256915	18158	0.0115
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	1	104256961	104303403	10	-0.7036
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	1	104303501	108729759	2878	0.0126
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	1	108734235	108734877	2	-3.9131
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	1	108737496	110233118	729	0.0242
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	1	110233262	110240178	13	0.9632
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	1	110242953	112690248	1956	0.0172
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	1	112690326	112697174	20	-0.4129
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	1	112697188	145151728	5397	0.0073
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	1	145151959	145152018	3	1.3338
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	1	145152050	148870937	967	0.0417
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	1	148893345	149336636	156	-0.678
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	1	149336702	149339585	5	0.0302
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	1	149340200	149429206	16	-0.4121
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	1	149436842	152555706	1497	0.0185
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	1	152555767	152586576	33	-1.6234
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	1	152586594	152759678	172	0.0286
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	1	152761923	152768700	37	-1.7868
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	1	152773905	161502894	5274	0.0201
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	1	161508791	161648621	52	-0.3541
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	1	161650375	167764835	4890	0.0171
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	1	167766183	167768513	5	-0.9181
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	1	167769672	196714822	19305	0.0118
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	1	196714873	196801442	87	-0.5766
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	1	196801655	223020504	17787	0.0171
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	1	223022923	223023769	3	-2.7652
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	1	223026717	229811169	4106	0.0275
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	1	229816856	229820196	3	-3.1103
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	1	229820456	249224388	14054	0.0174
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	2	12784	34663358	24091	0.0302
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	2	34663443	34717908	37	-0.4209
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	2	34717974	34727867	15	-1.0695
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	2	34736513	34748885	13	-0.315
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	2	34750545	159661485	74335	0.0205
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	2	159662522	159662798	2	-2.4909
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	2	159664703	184573947	15535	0.0173
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	2	184577193	184577324	3	-2.9687
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	2	184580895	243089456	35974	0.0257
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	3	60345	34734024	25480	0.0093
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	3	34740441	34791207	28	-0.9728
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	3	34795588	84699684	32289	0.012
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	3	84699758	84702015	11	-0.8272
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	3	84702031	97899419	5395	0.0077
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	3	97908670	97913425	3	-1.6134
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	3	97914817	129762859	19374	0.0173
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	3	129763698	129808276	55	0.4691
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	3	129808555	162512739	20280	0.01
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	3	162513092	162625995	68	0.5973
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	3	162626572	192877902	19191	0.0127
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	3	192877962	192882903	19	1.2215
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	3	192886435	194641316	1162	0.0155
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	3	194641346	194641845	4	-3.8094
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	3	194642480	195412212	326	0.0093
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	3	195418263	195446922	22	-0.659
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	3	195455508	195700482	101	0.0491
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	3	195701115	195709662	4	-1.3645
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	3	195718765	197896118	1088	0.0303
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	4	12281	9456977	5249	0.0338
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	4	9461230	9479035	7	0.9026
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	4	9479206	9479345	2	3.2996
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	4	9486087	10210390	546	0.021
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	4	10223416	10229920	16	0.6038
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	4	10229950	10238436	21	0.2065
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	4	10238961	10244955	6	-0.6551
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	4	10245898	10272093	34	0.0407
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	4	10272788	10274202	8	-1.2399
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	4	10274626	28959369	13377	0.0132
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	4	28959409	28960348	4	-1.5991
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	4	28960936	34778860	3544	0.0133
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	4	34778962	34824725	44	-0.5374
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	4	34829872	61533992	14826	0.0164
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	4	61534803	61535336	3	-1.4064
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	4	61538011	63667834	1189	0.0192
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	4	63669936	63671662	8	-0.912
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	4	63679630	69260073	3444	-4e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	4	69260551	69288142	7	-1.0009
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	4	69294799	69372003	16	0.039
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	4	69374941	69505115	67	0.3859
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	4	69506334	86976094	10828	0.0126
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	4	86976391	86979944	19	-0.7651
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	4	86980089	144743878	34604	0.0081
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	4	144744046	144863199	44	0.4387
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	4	144876673	161880141	10300	0.0134
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	4	161880197	161884908	18	-0.8087
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	4	161884919	165569182	2393	0.0021
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	4	165576770	165593134	12	-0.9748
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	4	165604098	172368442	4263	0.014
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	4	172368531	172377458	11	-0.548
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	4	172377710	172987857	399	0.0123
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	4	172987928	172989533	13	-1.7029
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	4	172995979	191027923	12117	0.0183
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	5	15532	685504	306	0.0699
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	5	685748	806336	42	0.7469
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	5	809047	12815780	9869	0.0237
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	5	12815865	12826650	10	-1.8657
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	5	12833857	46196114	20553	0.0135
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	5	46199434	46199435	2	-2.6491
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	5	46209299	46271108	15	-0.081
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	5	46271930	46273502	6	1.0398
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	5	46278212	57309072	5069	0.0087
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	5	57309418	57332916	37	-0.3838
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	5	57332955	155475105	60328	0.0123
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	5	155476772	155482729	14	-0.7022
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	5	155495250	160548155	3506	0.0101
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	5	160549698	160553410	4	-1.4284
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	5	160554141	175460087	10586	0.0252
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	5	175465689	175469507	2	-2.5057
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	5	175470324	180372168	2543	0.0305
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	5	180374484	180418103	21	0.5023
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	5	180433225	180790320	171	0.1103
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	6	149661	23743017	18234	0.0262
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	6	23744672	23745430	2	-2.4532
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	6	23747732	29079281	3098	0.0185
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	6	29084087	29161435	10	-1.2054
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	6	29162840	31348200	1142	0.0442
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	6	31348470	31348648	3	1.9574
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	6	31351035	32431292	451	0.1194
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	6	32431552	32501299	22	1.1382
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	6	32508476	32690027	96	0.2791
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	6	32690797	32690830	3	2.0936
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	6	32692227	48931729	10370	0.0212
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	6	48933070	48935079	3	-1.1426
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	6	48935200	53931151	3320	0.0108
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	6	53931230	53931803	5	1.8407
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	6	53931855	56262290	1492	0.0127
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	6	56267280	56267831	2	-2.0311
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	6	56268377	67683913	4546	-0.0011
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	6	67684059	67684531	3	-2.0413
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	6	67688083	78962889	7254	0.0077
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	6	78969065	79035185	113	-0.8329
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	6	79039234	103747421	15489	0.0057
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	6	103747432	103751919	12	-0.5661
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	6	103751935	124431774	12717	0.0166
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	6	124435941	124470365	20	0.5071
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	6	124470761	161032565	24247	0.0159
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	6	161032719	161033283	5	1.1245
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	6	161068042	171051005	7266	0.0223
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	7	43355	941749	224	0.0598
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	7	967199	1050506	25	0.3881
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	7	1054517	11737690	7180	0.0106
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	7	11737902	11745514	10	-0.7126
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	7	11747664	38325441	20004	0.0133
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	7	38325778	38333018	42	-0.2541
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	7	38333035	54380373	11069	0.0147
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	7	54386505	54386517	6	-0.9902
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	7	54393488	105158056	25984	0.0159
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	7	105160424	105166520	3	-1.9499
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	7	105166776	109441629	2843	0.0145
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	7	109441779	109453910	9	0.8881
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	7	109453982	142474939	20479	0.0166
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	7	142476719	142486045	27	0.7017
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	7	142486115	159127004	10581	0.0162
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	8	31254	595875	335	0.0637
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	8	595892	595908	2	4.2
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	8	601043	6825852	7386	0.012
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	8	6826263	6827186	11	-0.6505
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	8	6827199	7392941	187	0.1111
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	8	7392957	7398229	4	-0.5893
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	8	7398557	7738435	46	0.1973
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	8	7744064	7747699	5	1.0286
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	8	7752048	12241188	3355	0.0397
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	8	12241291	12304112	38	-0.3003
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	8	12304542	13633012	1145	0.003
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	8	13633107	13633284	2	-2.4574
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	8	13633796	15401178	1634	-0.0056
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	8	15403060	15411608	8	-5.396
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	8	15413447	24974476	7685	0.0141
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	8	24974522	24984250	24	-0.7568
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	8	24991104	39230659	9030	0.0188
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	8	39235603	39386965	59	0.8041
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	8	39388299	40771996	1075	0.015
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	8	40777852	40778471	2	-1.9563
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	8	40783680	85257989	24823	0.0119
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	8	85262883	85268666	19	-0.7034
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	8	85270682	89684895	2308	0.0133
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	8	89690294	89713071	9	-1.4743
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	8	89716151	112291494	13811	0.0148
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	8	112294279	112295038	6	-0.9836
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	8	112295081	112295260	4	-2.9384
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	8	112300281	125845307	8768	0.0158
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	8	125846956	125847182	2	-1.5961
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	8	125849614	138822323	9916	0.0242
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	8	138823734	138825024	4	-1.4554
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	8	138825770	146298155	4247	0.0459
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	9	46587	61420	6	0.1858
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	9	63524	93270	4	-1.1932
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	9	94152	43187967	31357	0.0094
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	9	43315670	44748658	99	-0.4016
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	9	44751355	72118434	1402	-0.0082
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	9	72120120	72120277	5	-0.5855
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	9	72127178	72808962	514	-0.0064
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	9	72810986	72812754	2	-1.3086
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	9	72813681	79554460	4816	0.0165
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	9	79556881	79566864	5	-1.3556
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	9	79566889	85376276	4047	0.0166
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	9	85376571	85384244	9	-0.9474
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	9	85391686	141091394	37641	0.0219
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	10	72759	20850113	17038	0.0187
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	10	20853201	20853503	3	-1.9793
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	10	20853534	31246510	7254	0.0235
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	10	31251334	31251726	9	-0.7197
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	10	31251738	47771030	7637	0.0202
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	10	47897394	47913401	3	-1.9939
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	10	47948060	48771950	291	0.0146
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	10	48837810	48840627	2	2.397
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	10	48883402	67306276	12493	0.0122
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	10	67307923	67314446	28	-1.9751
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	10	67322795	71282472	2552	0.0158
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	10	71282486	71282842	4	-2.2228
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	10	71291614	81383874	6692	0.0199
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	10	81383884	81497471	14	-0.8915
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	10	81514175	135506704	37044	0.0211
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	11	198510	4967650	2476	0.0348
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	11	4968117	4976371	33	0.5989
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	11	4976389	5787405	794	0.0078
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	11	5788080	5809139	32	-0.9147
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	11	5809338	55363340	31319	0.0133
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	11	55374032	55439990	47	-0.75
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	11	55442318	134944770	52432	0.0175
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	12	150442	9630556	6205	0.0268
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	12	9633870	9713674	22	1.1908
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	12	9714954	19467012	6636	0.0146
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	12	19474770	19576936	52	0.6679
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	12	19580504	34231115	10552	0.0149
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	12	34231416	34275406	22	-0.8176
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	12	34275794	45904438	5025	0.0057
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	12	45905840	45909537	3	-2.4145
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	12	45913292	133778189	56527	0.0192
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	13	19026949	115108397	64270	0.0178
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	14	19002124	20959274	585	0.0219
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	14	20959789	20999685	34	0.3819
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	14	21004037	24458644	2319	0.0103
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	14	24458730	24458943	2	-1.9601
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	14	24461854	41608358	10886	0.0148
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	14	41610496	41657349	15	-0.8463
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	14	41670102	70018047	17839	0.0136
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	14	70018368	70022726	10	-0.803
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	14	70022944	82497798	8210	0.018
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	14	82501862	82503709	2	-1.8331
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	14	82507338	106538062	15230	0.0193
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	14	106541753	106569463	14	0.8005
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	14	106574118	106777343	100	-0.0936
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	14	106783044	106802053	8	0.6787
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	14	106815943	106890808	38	0.0331
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	14	106893273	106918649	47	-0.7776
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	14	106922531	107153173	133	-0.0488
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	14	107160325	107165591	8	0.7083
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	14	107166966	107184184	14	0.2027
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	14	107184376	107225161	37	-0.1617
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	14	107230303	107285437	31	0.1178
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	15	20016328	20194738	46	-0.143
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	15	20203961	22681250	378	0.4677
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	15	22751094	30370031	4672	0.024
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	15	30386411	30900878	111	-0.3324
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	15	30913587	32511974	1069	0.0115
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	15	32512220	32615301	15	-0.4748
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	15	32615633	43984942	7311	0.0162
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	15	43988553	44024490	10	-0.6154
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	15	44034098	76895198	20741	0.0167
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	15	76895344	76895775	8	-0.9137
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	15	76902179	84540717	4432	0.0113
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	15	84540738	84547547	8	-0.8668
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	15	84547867	102469040	13244	0.0208
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	16	60777	55796594	27326	0.0327
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	16	55798222	55798779	3	2.3651
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	16	55804348	78371608	14446	0.0164
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	16	78372440	78384765	17	-2.5066
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	16	78385001	79010613	838	0.0437
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	16	79011173	79011252	2	-1.291
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	16	79011324	90287535	9799	0.0429
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	17	526	81049726	45297	0.03
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	18	11543	78015057	50791	0.0148
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	19	90910	41993630	20020	0.0276
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	19	41997341	41998731	2	1.5859
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	19	42000366	59097854	9338	0.0318
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	20	61305	7697872	5813	0.0314
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	20	7700108	7701127	4	-1.5175
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	20	7701584	15301374	5837	0.011
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	20	15301902	15302374	3	-2.3981
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	20	15305258	62916068	30832	0.0239
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	20	62954695	62956153	5	-0.5643
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	21	10736871	32158119	12851	0.0092
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	21	32161550	32167869	2	-1.612
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	21	32169139	40945644	6516	0.015
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	21	40945880	40962954	22	0.435
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	21	40965327	44822257	3144	0.0259
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	21	44827645	44837359	11	0.6865
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	21	44841812	48096957	1852	0.0434
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	22	16052528	16061342	5	0.4026
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	22	16077141	39351466	15507	0.0325
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	22	39363619	39375307	24	-0.5193
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	22	39389628	42781623	1833	0.022
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	22	42784201	42892439	60	0.2683
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	22	42892582	49268700	4897	0.0226
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	22	49269923	49270542	2	-2.7291
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	22	49273291	51234455	1236	0.1238
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	X	168477	41421540	25729	0.03
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	X	41433191	41438939	3	-1.4866
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	X	41439191	76335490	14405	0.0096
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	X	76349873	76545159	20	-0.8564
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	X	76546512	78388813	604	0.0142
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	X	78390208	78390336	2	-1.9855
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	X	78390511	115137955	20035	0.0117
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	X	115138403	115150638	6	-2.2368
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	X	115156419	155182354	23774	0.0208
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	Y	2650438	6101425	872	-2.6487
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	Y	6107901	6313572	91	-3.8527
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	Y	6315579	6675272	112	-2.8575
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	Y	6677619	6681479	5	-5.5518
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	Y	6683347	15590276	2499	-3.1672
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	Y	15590342	15594523	3	-7.6945
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	Y	15594889	19034392	1826	-3.1645
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	Y	19038302	19170442	58	-3.5924
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	Y	19179335	19179540	3	-7.6439
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	Y	19182271	19504799	168	-3.2213
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	Y	19509909	21024613	699	-3.6958
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	Y	21025062	23882903	1094	-3.1982
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	Y	23883521	26430674	558	-3.5858
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	Y	26430908	26473956	18	-2.1897
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	Y	26482088	27240184	97	-3.9843
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	Y	27254679	27529084	40	-2.7899
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	Y	27535030	27600323	21	-3.884
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	Y	27601827	27718290	36	-2.6364
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	Y	27720551	28054028	140	-3.8166
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	Y	28055102	28114308	29	-2.9149
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	Y	28117880	28423938	83	-3.9533
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	Y	28438116	59018259	183	-2.7907
