Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	1	3218610	247813706	129038	0.002
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	2	484222	106479284	55964	0.0116
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	2	106479806	106484608	8	-0.9822
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	2	106485085	242476062	75229	0.0085
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	3	2212571	16163179	8455	0.0015
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	3	16163443	16164120	2	-1.7615
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	3	16164695	197538677	97845	-2e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	4	1053934	188763651	102650	5e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	5	914233	180360469	100422	9e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	6	1014281	56262290	33424	0.0025
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	6	56267280	56267831	2	-2.0467
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	6	56268377	170903919	62980	-6e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	7	705284	65622262	33945	0.0014
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	7	65622815	65626022	2	-1.557
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	7	65627032	158385118	47319	0.0043
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	8	617667	145232496	81486	0.0014
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	9	789932	140938752	67982	0.0022
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	10	415240	123957048	74175	0.0029
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	10	123958805	123964227	2	-2.0308
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	10	123967911	135225087	6628	0.0019
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	11	456120	134142530	77206	0.0023
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	12	889902	133161346	73883	0.001
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	13	19450806	114987458	56580	0.0031
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	14	20501368	105988038	49402	0.0013
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	15	23687685	101884307	44495	-9e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	16	653459	89379936	40783	0.0015
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	17	987221	80917016	36969	0.0049
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	18	329586	77109240	42618	0
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	19	284018	41993630	17120	0.0048
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	19	41997341	41998731	2	1.5694
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	19	42000366	58878226	6824	0.001
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	20	455764	62219837	37268	0.0037
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	21	15347621	47678774	20565	-0.0017
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	22	17423930	49331012	16919	0.0012
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	X	3157107	41421540	17313	0.0069
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	X	41433191	41438939	3	-1.5028
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	X	41439191	78388813	12277	-0.0027
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	X	78390208	78390336	2	-2.0018
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_C07_801944	X	78390511	154905589	34162	0.0021
