Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	1	3208470	116631820	65486	0.0038
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	1	116633415	116642085	12	-0.6867
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	1	116643649	191178521	28570	0.0023
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	1	191178595	191213959	29	-0.4121
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	1	191213974	193909539	1655	-0.0135
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	1	193911252	193913671	2	-2.5756
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	1	193915865	197497390	1934	0.0055
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	1	197499710	197499862	3	-1.2128
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	1	197500913	209306229	7943	8e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	1	209306282	209306868	2	-1.7397
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	1	209308156	245880329	23335	0.0011
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	2	474222	242124735	131205	0.007
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	3	526235	58773907	32796	0.0036
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	3	58774056	58774924	2	-2.0781
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	3	58785443	199023074	73512	0.0056
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	4	1043934	189836143	102637	0.0023
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	5	967233	180293075	100425	0.0023
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	6	959281	170745844	96405	-4e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	7	671810	1227890	98	-0.005
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	7	1269559	1319071	16	-1.2903
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	7	1322058	3162859	773	-0.0148
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	7	3163095	3171047	12	-1.1628
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	7	3173447	14481473	5780	-0.0035
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	7	14481940	14493295	3	-2.0096
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	7	14500218	151304066	71193	8e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	7	151308434	151308606	4	-1.3551
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	7	151335870	155400741	1995	-0.0057
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	7	155401756	155401774	2	-2.6129
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	7	155401958	158077879	1385	1e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	8	607667	4934301	2320	0.0034
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	8	4940857	4941363	2	-2.1318
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	8	4942021	124198179	66013	0.0067
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	8	124198376	124198387	2	-1.9811
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	8	124199253	145304484	13130	-0.001
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	9	779932	18357074	10738	0.0054
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	9	18361916	18362565	2	-2.1286
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	9	18364849	140058573	57229	6e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	10	405240	110503949	64771	0.0036
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	10	110508945	110510293	3	-1.7371
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	10	110511738	135075077	16025	-0.0017
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	11	446120	123408880	70275	9e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	11	123415073	123426087	10	-1.1067
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	11	123426689	133647740	6923	-0.0028
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	12	760163	129837371	73160	0.0019
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	12	129838181	129838203	2	-2.1558
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	12	129842984	131671419	727	-0.0173
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	13	18348806	114005560	56585	-0.0056
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	14	19571208	105059083	49400	0.0032
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	15	21238778	99701830	44490	0.0026
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	16	593460	87907437	40845	-0.0021
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	17	933971	78510305	36968	1e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	18	319586	42574450	23661	0.0053
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	18	42576054	42576494	2	1.7575
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	18	42584840	71686927	16734	0.0049
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	18	71694875	71695332	4	-1.3198
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	18	71698195	75210228	2220	-0.0039
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	19	235018	51426459	19003	-0.0038
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	19	51430833	51432666	3	-1.623
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	19	51433985	63570038	4936	0.0114
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	20	403764	61690281	37263	0.0071
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	21	14269492	46503202	20564	0.0011
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	22	15803930	47717016	16922	-0.0016
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	X	3167107	30112007	12112	0.004
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	X	30112186	30115154	3	-3.0369
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	X	30115404	154558783	51495	0.0053
