Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	1	3218610	116830297	65545	0.0038
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	1	116831892	116840562	12	-0.6867
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	1	116842126	192911898	28567	0.0023
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	1	192911972	192947336	29	-0.4121
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	1	192947351	195642916	1655	-0.0135
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	1	195644629	195647048	2	-2.5756
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	1	195649242	199230767	1934	0.0055
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	1	199233087	199233239	3	-1.2128
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	1	199234290	211239606	7944	8e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	1	211239659	211240245	2	-1.7397
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	1	211241533	247813706	23332	0.0011
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	2	484222	242476062	131197	0.007
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	3	2212571	58798867	32796	0.0036
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	3	58799016	58799884	2	-2.0781
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	3	58810403	197538677	73506	0.0055
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	4	1053934	188763651	102642	0.0023
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	5	914233	180360469	100425	0.0023
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	6	1014281	170903919	96414	-4e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	7	705284	1261364	98	-0.005
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	7	1303033	1352545	16	-1.2903
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	7	1355532	3196333	773	-0.0148
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	7	3196569	3204521	12	-1.1628
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	7	3206921	14514948	5782	-0.0035
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	7	14515415	14526770	3	-2.0096
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	7	14533693	151673133	71191	8e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	7	151677501	151677673	4	-1.3551
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	7	151704937	155707980	1996	-0.0055
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	7	155708995	155709013	2	-2.6129
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	7	155709197	158385118	1385	1e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	8	617667	4946893	2321	0.0033
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	8	4953449	4953955	2	-2.1318
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	8	4954613	124128998	66019	0.0067
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	8	124129195	124129206	2	-1.9811
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	8	124130072	145232496	13130	-0.001
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	9	789932	18367074	10740	0.0053
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	9	18371916	18372565	2	-2.1286
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	9	18374849	140938752	57239	6e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	10	415240	110513959	64769	0.0036
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	10	110518955	110520303	3	-1.7371
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	10	110521748	135225087	16025	-0.0017
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	11	456120	123903670	70265	9e-04
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	11	123909863	123920877	10	-1.1067
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	11	123921479	134142530	6923	-0.0028
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	12	889902	131271418	73155	0.0019
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	12	131272228	131272250	2	-2.1558
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	12	131277031	131875814	321	-0.0167
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	12	131875983	131886071	3	-1.0008
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	12	131891698	133161346	403	-0.0105
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	13	19450806	114987458	56581	-0.0056
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	14	20501368	105988038	49398	0.0032
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	15	23687685	101884307	44488	0.0026
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	16	653459	89379936	40781	-0.0022
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	17	987221	80917016	36968	0
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	18	329586	44320452	23661	0.0053
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	18	44322056	44322496	2	1.7575
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	18	44330842	73557939	16731	0.0049
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	18	73565887	73566344	4	-1.3198
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	18	73569207	77109240	2220	-0.0039
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	19	284018	46734619	19003	-0.0038
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	19	46738993	46740826	3	-1.623
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	19	46742145	58878226	4936	0.0114
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	20	455764	62219837	37266	0.0071
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	21	15347621	47678774	20563	0.0011
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	22	17423930	49331012	16921	-0.0016
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	X	3157107	30202086	12113	0.004
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	X	30202265	30205233	3	-3.0369
SALLY_p_TCGA_129_134_148_149_N_GenomeWideSNP_6_D10_802002	X	30205483	154905589	51511	0.0053
