Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	1	3208470	184670865	90277	0.0647
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	1	184671023	185146514	269	-0.352
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	1	185149815	245633498	38184	0.0817
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	1	245634546	245634555	2	-2.0172
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	1	245634674	245880329	157	0.0898
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	2	474222	49420504	29225	0.1599
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	2	49421553	52902264	1764	-0.2629
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	2	52904699	57795525	2553	0.1721
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	2	57797015	57800134	3	1.577
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	2	57803608	76224962	10692	0.1477
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	2	76227491	76228479	3	-1.0661
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	2	76228945	85185956	4740	0.1794
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	2	85185971	85186917	2	-1.4616
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	2	85187487	208990372	62096	0.0465
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	2	208993416	228620166	12202	-0.2276
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	2	228620465	228623173	17	-0.6673
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	2	228623241	242124735	7796	-0.2852
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	3	526235	61101861	33474	0.1439
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	3	61102245	61102344	2	-1.2736
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	3	61103057	195079116	71515	0.1692
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	3	195082012	195450122	237	0.5167
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	3	195450896	199023074	1033	0.134
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	4	1043934	47763583	28108	0.0408
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	4	52393514	57598083	3328	-0.4337
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	4	57598178	57598705	2	-2.1594
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	4	57600551	58940379	821	-0.5282
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	4	58940932	58941068	2	-2.4831
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	4	58942378	81527933	11765	-0.388
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	4	81528446	81528580	2	-2.1531
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	4	81528673	91443447	5903	-0.4371
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	4	91451088	91715769	114	-0.801
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	4	91716816	189836143	52356	-0.4957
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	5	967233	95195167	50419	-0.5364
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	5	95195259	95198087	4	-2.2421
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	5	95198992	175045289	47388	-0.5383
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	5	175045644	175046145	2	-6.3659
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	5	175046163	180293075	2151	-0.6323
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	6	959281	3485624	1850	-0.6163
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	6	3488082	3550856	45	-0.1222
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	6	3551500	3599562	39	-0.6942
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	6	3599994	3671753	57	-0.0463
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	6	3672082	28322677	16051	-0.6071
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	6	28324006	28597258	145	0.9688
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	6	28600633	37317444	3194	0.4002
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	6	37318291	37319007	2	-1.0426
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	6	37319144	38795221	977	0.4324
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	6	38797028	38800415	2	-0.7317
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	6	38801339	40947406	1702	0.4699
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	6	40952901	41423214	311	1.3066
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	6	41428443	47249453	3345	0.4411
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	6	47250452	47256414	5	1.2376
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	6	47258627	63376344	6463	0.4865
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	6	63379827	68186153	2647	-0.5201
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	6	68216637	100599660	17921	0.4859
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	6	100600907	109521918	5133	-0.5723
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	6	109525763	129765743	11457	0.4902
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	6	129766220	129766605	2	-1.0513
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	6	129770574	147201307	10768	0.4808
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	6	147203942	147939970	452	0.7491
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	6	147940026	153386878	3928	0.4808
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	6	153387372	153404174	11	1.0425
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	6	153405656	154135453	481	0.5902
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	6	154141065	154155102	15	1.1337
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	6	154156078	166304291	7581	0.4763
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	6	166312780	170745844	1655	0.7509
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	7	671810	85756324	43889	0.2979
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	7	85758717	86002119	139	0.8373
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	7	86005441	108129673	10878	0.4386
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	7	108130268	108580300	284	1.0064
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	7	108580590	108729117	104	1.5313
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	7	108730620	158077879	25933	-0.0343
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	8	607667	59609008	31362	-0.0039
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	8	59609483	145304484	50066	0.6372
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	9	779932	12720924	6305	-0.0355
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	9	12724313	13107676	247	0.3507
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	9	13112221	13122825	8	-0.03
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	9	13124791	19906105	5418	-0.5281
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	9	19906781	20199017	227	-0.0496
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	9	20201174	21164685	756	-0.6324
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	9	21165516	21790513	381	-2.1659
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	9	21791319	21801533	6	-6.6207
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	9	21801709	22283166	302	-2.2168
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	9	22283346	29144699	3927	-0.7408
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	9	29144876	140058573	50282	-0.0674
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	10	405240	1398581	303	-0.1771
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	10	1399973	1404085	2	-1.6129
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	10	1404544	7672592	4562	-0.1542
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	10	7676608	7692685	18	-0.8604
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	10	7692956	80743521	42093	-0.1429
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	10	80744387	80744822	2	-1.8337
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	10	80744976	135075077	33713	-0.1498
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	11	446120	75721525	39802	-0.2403
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	11	75722438	75729143	3	-2.1236
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	11	75731175	97821150	13364	-0.2437
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	11	97823598	97876093	47	-0.8229
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	11	97880632	133647740	23831	-0.2865
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	12	760163	131671419	73845	0.1308
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	13	18348806	39313336	13269	0.2449
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	13	39315048	39649929	220	0.5297
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	13	39655910	114005560	43082	0.2246
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	14	19571208	85995942	38150	-0.0264
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	14	85998028	86375602	163	-0.4829
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	14	86375711	89364936	1714	-0.0302
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	14	89365067	89482858	78	-0.3217
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	14	89484799	105059083	9237	-0.0629
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	15	21238778	22943182	790	0.1747
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	15	22953112	23361712	247	-0.3048
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	15	23361827	88008783	36332	0.1719
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	15	88010667	88261181	119	0.5321
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	15	88262133	99701830	6974	0.2888
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	16	593460	69984064	28983	0.0809
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	16	69992296	70013643	22	-0.4048
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	16	70021103	87907437	11792	0.093
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	17	933971	3559539	1127	0.0843
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	17	3566887	3622129	37	-0.1742
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	17	3623829	4229742	302	0.1843
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	17	4231842	11658904	4350	-0.2011
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	17	11662069	17346229	2410	-0.9953
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	17	17351936	17363493	11	-2.2979
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	17	17364606	18190595	402	-1.0165
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	17	18191786	20673250	726	-0.6394
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	17	20673956	20675227	4	-1.9889
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	17	20677096	21243600	208	-0.6262
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	17	21245985	27822717	2388	0.0546
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	17	27823228	27844242	13	0.542
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	17	27844289	27906240	46	0.7928
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	17	27909678	28092789	111	0.5264
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	17	28094198	30188442	953	0.1018
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	17	30189166	30194141	2	-1.5993
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	17	30201401	30475961	143	0.0468
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	17	30477355	30548211	46	0.3884
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	17	30548788	31084512	258	0.0357
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	17	31085114	32337940	468	0.449
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	17	32338345	33710041	512	1.5893
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	17	33719545	37074310	1613	2.0708
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	17	37079440	37080659	2	-0.3367
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	17	37085803	37252973	79	1.9778
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	17	37257033	38007521	353	-0.6425
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	17	38010380	72588815	17955	0.1231
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	17	72588898	72594077	2	-1.2357
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	17	72594399	78510305	2377	0.0889
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	18	319586	38005188	20909	-0.0191
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	18	38011151	70906344	18761	-0.5317
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	18	70906460	70906685	2	-4.2516
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	18	70907204	73960239	2177	-0.587
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	18	73960255	73961170	2	-3.1074
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	18	73965435	75210228	642	-0.6078
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	19	235018	7247292	1994	-0.6603
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	19	7247452	7295986	8	0.2281
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	19	7303015	7351633	22	-0.487
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	19	7357300	63570038	21862	0.004
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	20	403764	3733819	2097	0.0049
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	20	3738831	3741613	4	-1.2558
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	20	3744516	26143759	14695	0.0682
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	20	26143868	61690281	20441	0.37
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	21	14269492	46503202	20560	-0.046
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	22	15803930	47717016	16907	0.2124
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	X	3167107	79713077	30348	-0.1783
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	X	79713679	147078599	30684	0.1586
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	X	147086521	147142194	42	0.5285
TREAD_p_TCGA_b146_152_SNP_N_GenomeWideSNP_6_D01_809332	X	147145891	154558783	2615	0.2281
