Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	1	61735	1663336	238	0.1176
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	1	1663396	1663831	2	2.0514
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	1	1669101	72763370	42696	0.0065
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	1	72768418	72809372	42	-0.7369
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	1	72809431	110224384	23605	-0.0025
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	1	110224427	110244998	33	-0.4284
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	1	110246126	112690326	1953	-0.0033
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	1	112695965	112697376	24	0.4797
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	1	112697390	144842558	5227	-0.0019
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	1	144849539	144849552	3	1.2059
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	1	144868360	152759678	2983	0.0267
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	1	152761923	152768700	37	0.4411
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	1	152773905	248737447	65168	0.0026
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	1	248749194	248809369	37	-0.7574
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	1	248818483	249224388	140	0.1177
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	2	12784	34652579	24027	0.0024
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	2	34652871	34737057	58	0.3106
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	2	34737163	52754468	12998	7e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	2	52754480	52781542	39	-2.0297
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	2	52787949	89583907	22799	0.0036
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	2	89593755	90269005	169	0.3979
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	2	90274766	106874722	6612	-0.0014
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	2	106880095	106887408	14	0.5951
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	2	106887870	108440736	990	0.0064
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	2	108446969	108480907	2	-1.7261
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	2	108492088	123477014	8538	0.0038
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	2	123479899	123482241	9	-0.8175
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	2	123483653	124661313	809	-0.0152
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	2	124662446	124713172	38	-0.9636
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	2	124715621	146862085	13494	0.0027
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	2	146864404	146866934	24	0.6491
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	2	146877806	206315691	35543	-0.0026
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	2	206316335	206317208	2	-2.0786
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	2	206318593	243089456	23388	0.0033
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	3	60345	6646543	5814	0.004
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	3	6651128	6652676	17	-0.6838
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	3	6653068	9358616	2366	0.0015
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	3	9359721	9368125	11	-0.6279
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	3	9371404	26426191	11647	5e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	3	26434124	26439343	5	-0.992
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	3	26445973	26601100	113	0.0448
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	3	26601760	26611885	9	-1.4867
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	3	26611898	26614974	9	0.0915
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	3	26614976	26614982	5	-0.8682
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	3	26614984	68746164	27704	0.0048
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	3	68746259	68748758	15	-0.6025
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	3	68748786	84699758	9905	-0.0018
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	3	84699793	84702136	13	-0.5755
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	3	84702161	97923104	5393	-0.0027
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	3	97925742	97926120	2	-1.4246
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	3	97929864	128399221	18684	0.003
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	3	128405171	128412331	7	0.7595
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	3	128414161	129763698	625	0.0114
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	3	129766586	129806236	51	-1.0819
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	3	129806924	162512739	20220	9e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	3	162513092	162524858	10	0.601
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	3	162528630	162532950	4	-0.4369
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	3	162534730	162536583	2	-2.2392
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	3	162536823	162540490	4	-0.7908
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	3	162545716	162623881	45	0.4426
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	3	162623897	164780725	1194	0.0049
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	3	164783056	164784113	2	-1.4726
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	3	164790269	192877962	17927	0.0055
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	3	192878045	192879006	5	1.1853
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	3	192880473	197896118	2714	0.0221
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	4	12281	10223628	5793	7e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	4	10223848	10235268	33	0.9905
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	4	10236142	30131099	14180	0.0074
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	4	30131261	30135663	5	-0.9106
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	4	30139712	64146704	19008	-0.0022
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	4	64147093	64151913	3	-1.8554
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	4	64154567	64693940	308	-0.0191
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	4	64697469	64697828	6	-1.6815
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	4	64705156	64705785	14	-0.4487
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	4	64707581	64708258	8	-2.2527
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	4	64716431	69284591	2845	-0.0018
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	4	69288138	69288142	3	-1.5883
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	4	69294799	69360489	14	-0.1073
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	4	69367142	69485840	65	0.5442
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	4	69485979	189244891	73627	-0.0012
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	4	189249657	189266054	20	-0.7867
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	4	189268658	191027923	1116	0.0106
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	5	15532	21451200	15722	0.0016
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	5	21451277	21452438	4	-1.8539
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	5	21452496	103851221	46811	-0.0023
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	5	103860373	103860604	4	-1.6377
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	5	103861049	117386617	9360	-0.0018
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	5	117388422	117389085	11	-0.7427
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	5	117404340	140218722	13765	7e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	5	140223836	140231839	10	-0.9306
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	5	140241027	175554715	24271	0.0073
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	5	175558554	175564134	5	-1.009
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	5	175564292	177227551	714	0.0332
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	5	177228579	177232605	2	1.6836
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	5	177254965	180374523	1809	0.0177
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	5	180378710	180417207	15	-1.9004
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	5	180417614	180790320	174	0.0936
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	6	149661	31348200	22438	0.0136
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	6	31348470	31348648	3	1.4103
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	6	31351035	58422642	16658	0.0093
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	6	58426052	58427069	5	-0.8745
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	6	58432574	65336942	1925	-0.0029
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	6	65347544	65348992	2	1.4607
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	6	65350776	77439868	7906	-0.0021
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	6	77440048	77452757	20	-0.7583
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	6	77461073	78962889	973	0.0143
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	6	78969065	79035185	113	-0.4888
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	6	79039234	103734645	15416	-0.0057
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	6	103734803	103751338	23	-0.5032
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	6	103751564	103762061	27	-1.3049
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	6	103765470	161032565	36823	0.0045
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	6	161032719	161068108	7	0.7494
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	6	161068477	171051005	7241	0.0043
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	7	43355	64568852	41588	0.002
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	7	64594065	64651349	10	-1.1029
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	7	64651640	97385970	18938	0.0022
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	7	97395460	97404240	17	-0.6259
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	7	97404277	100325189	1283	0.0082
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	7	100329244	100329265	2	-1.1112
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	7	100332842	109437680	5333	0.0037
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	7	109437757	109458757	27	-0.3932
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	7	109458772	109658868	132	0.0068
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	7	109667548	109668189	3	-1.1317
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	7	109681156	111065292	947	-0.0063
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	7	111065494	111066659	5	-0.9488
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	7	111069414	126045556	8913	0.003
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	7	126045651	126046543	8	0.8483
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	7	126046600	141786850	9941	0.0081
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	7	141787130	141807886	24	0.4068
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	7	141808573	142476719	444	0.05
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	7	142476764	142486345	28	0.7495
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	7	142486495	154389895	7307	0.0042
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	7	154393171	154399613	4	-1.858
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	7	154400830	159127004	3233	0.0144
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	8	31254	2701934	2115	0.0193
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	8	2703533	2707171	8	-0.9516
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	8	2707186	7978187	5903	0.0124
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	8	7989963	7990294	3	-1.3435
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	8	7997031	11949551	3234	0.0312
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	8	11987726	12001123	6	0.754
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	8	12034307	12198254	9	-0.1344
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	8	12216009	12247486	40	-1.0843
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	8	12260927	23402308	9310	-1e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	8	23407740	23407871	5	-0.8174
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	8	23407905	24974522	1136	-0.0063
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	8	24974577	24984223	22	-0.5086
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	8	24984250	39230659	8992	-0.0031
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	8	39235603	39386965	58	0.5008
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	8	39388299	40771996	1071	-0.0079
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	8	40777852	40778471	2	-1.592
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	8	40783680	72215311	16793	-0.004
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	8	72215364	72216599	8	-1.7776
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	8	72219863	72310285	74	-6e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	8	72311997	72324886	6	-0.8802
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	8	72326920	112294466	23970	-1e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	8	112294646	112295260	7	-1.1021
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	8	112300281	146298155	22871	0.0045
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	9	46587	2147099	2316	0.0411
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	9	2148837	2150662	6	-0.6632
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	9	2152115	2481455	366	0.0236
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	9	2481651	2481683	2	-1.3316
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	9	2483527	23359612	17677	0.0039
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	9	23360771	23373484	11	0.6462
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	9	23378488	29091097	4320	-0.006
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	9	29094549	29094997	2	-2.4593
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	9	29097680	43315974	6564	-5e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	9	43472537	43800186	39	0.5932
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	9	44114872	68183981	240	-6e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	9	68186051	68186057	4	1.6845
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	9	68186059	90522594	14418	0.0029
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	9	90554151	90554219	2	-2.1522
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	9	90557957	138430098	32748	0.0065
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	9	138430454	138430654	2	-0.9786
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	9	138431166	140219868	529	0.0012
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	9	140228155	140273061	24	0.3166
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	9	140273075	141091394	410	0.0112
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	10	72759	17927554	14821	0.0163
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	10	17938208	17949857	2	1.5592
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	10	17971816	27223903	6332	0.0029
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	10	27225904	27230737	16	0.4479
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	10	27231610	31246510	3025	0.0061
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	10	31251334	31251726	9	-0.7569
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	10	31251738	37448101	4097	0.0082
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	10	37454397	37461148	5	-0.8857
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	10	37467614	47264864	3323	0.0013
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	10	47317636	47414281	6	-0.763
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	10	47419711	49241492	505	0.0393
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	10	49270823	49287591	3	-1.2545
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	10	49287603	110960027	41056	0.0024
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	10	110966751	110966879	3	-1.7539
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	10	110968020	135506704	17616	0.007
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	11	198510	4250013	1790	0.0317
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	11	4256129	4336529	27	-0.4592
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	11	4346809	55374203	32729	0.0018
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	11	55376023	55452534	53	0.3534
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	11	55452977	134944770	52268	0.0051
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	12	150442	9633870	6199	0.0306
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	12	9637909	9713674	21	-1.5219
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	12	9714954	33294660	16577	0.0072
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	12	33301406	33308459	30	-0.7305
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	12	33308497	45899825	5597	0.0087
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	12	45904438	45909537	4	-1.2296
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	12	45913292	90483350	27191	0.0057
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	12	90491669	90492074	7	-1.6753
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	12	90493557	118651882	19173	0.0073
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	12	118654143	118659930	3	-1.2701
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	12	118666257	133778189	10013	0.0261
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	13	19026949	38071135	13508	0.0119
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	13	38072036	38084757	16	-0.4994
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	13	38088330	115108397	50503	5e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	14	19002124	19562139	41	-0.0151
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	14	19600435	20100326	34	0.4246
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	14	20105491	20423372	115	1.0197
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	14	20424926	74001123	34017	0.002
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	14	74006707	74020979	8	1.0176
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	14	74029900	106535295	20767	0.0054
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	14	106538062	106567100	14	0.5928
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	14	106569463	106868286	139	-0.0179
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	14	106868554	106931365	59	-0.396
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	14	106934284	107153173	129	-0.004
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	14	107160325	107179847	21	0.5592
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	14	107184184	107285437	69	-0.0539
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	15	20016328	22042753	305	-0.0019
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	15	22263557	22291024	6	1.8405
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	15	22293227	102469040	51610	0.0081
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	16	60777	4877958	2021	0.037
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	16	4878402	4878889	3	-1.0465
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	16	4883597	11387545	6483	0.0274
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	16	11389048	11389136	2	-1.0748
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	16	11389628	11603872	164	0.0149
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	16	11608244	11629948	10	0.5235
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	16	11633482	15049658	2435	0.0199
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	16	15049885	15085684	38	-0.5928
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	16	15087171	33056748	9052	0.044
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	16	33097422	33241953	3	-1.0499
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	16	33300894	34340034	217	0.1056
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	16	34342478	34361393	11	-0.5324
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	16	34361409	34449608	69	-0.0102
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	16	34459037	34746193	168	0.3806
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	16	34748704	74379973	17807	0.0049
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	16	74384258	74456601	10	0.6609
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	16	74465396	90287535	13827	0.034
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	17	526	9528124	5412	0.029
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	17	9529531	9533557	4	-0.8164
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	17	9540774	9933487	334	-3e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	17	9936249	9985841	41	0.2967
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	17	9986203	18358946	5629	0.0238
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	17	18358949	18459272	25	-1.2848
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	17	18464586	34436708	6913	0.0191
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	17	34437128	34535651	39	0.6466
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	17	34543343	39423077	2541	0.0157
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	17	39423090	39430531	20	1.0542
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	17	39432724	44163098	2506	0.0299
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	17	44165803	44208144	32	-0.3056
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	17	44208333	64409779	11608	0.0043
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	17	64410796	64486280	69	-0.9076
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	17	64489131	78628863	9076	0.0261
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	17	78629793	78634179	2	1.4454
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	17	78634300	80726260	793	0.02
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	17	80740141	80744328	2	-1.5292
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	17	80744373	81049726	166	0.0374
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	18	11543	78015057	50614	0.0038
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	19	90910	9273800	3410	0.03
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	19	9274672	9278121	5	-1.2138
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	19	9284760	59097854	25895	0.0184
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	20	61305	3811433	2808	0.0211
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	20	3812706	3875393	33	0.3779
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	20	3885917	62956153	39543	0.007
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	21	10736871	46924193	23642	0.0094
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	21	46926551	46931109	3	-1.0884
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	21	46931460	48096957	686	0.0698
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	22	16052528	17495551	375	0.0802
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	22	17499034	17499508	2	1.4114
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	22	17499890	22380718	2773	0.0846
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	22	22380743	22382139	10	-0.3999
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	22	22382276	22429448	74	0.0295
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	22	22429639	22431856	6	0.5606
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	22	22432155	22474023	59	-0.0059
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	22	22474492	22474613	4	-0.828
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	22	22481498	24337949	1312	0.0686
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	22	24344422	24396814	20	0.6643
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	22	24401529	51234455	18893	0.0176
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	X	168477	65467699	34895	0.0018
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	X	65467997	65469646	2	-2.8903
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	X	65469895	65766536	200	-0.027
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	X	65769668	65933324	86	0.7874
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	X	65936432	155182354	48970	-0.0049
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	Y	2650438	7449497	1454	-0.8909
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	Y	7454037	7472222	18	-1.4246
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	Y	7473079	24070184	6002	-0.8837
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	Y	24107787	24177818	3	-2.4234
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	Y	24215015	24663599	184	-0.8878
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	Y	24740869	25106855	31	-1.9342
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	Y	25159666	25733001	58	-0.8822
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	Y	25746752	26630929	270	-1.5485
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	Y	26631228	26825375	38	-2.326
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	Y	26921276	28215445	323	-1.5484
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	Y	28223816	28245132	5	-0.7791
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	Y	28245317	28322083	20	-1.2813
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A05_1230874	Y	28344493	59018259	225	-0.8932
