Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	1	51598	1637750	233	0.0953
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	1	1639922	1652798	4	-1.0552
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	1	1653196	1662463	6	-0.1641
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	1	1677447	8125580	3825	0.0186
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	1	8128717	8131908	6	0.7301
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	1	8139674	16768214	4644	0.0143
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	1	16769408	17155662	165	0.3099
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	1	17157507	22024236	3248	0.0024
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	1	22032698	22036751	3	-0.9915
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	1	22037313	25455928	2009	0.0164
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	1	25465715	25519533	27	-1.2563
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	1	25519573	34864261	4965	0.0122
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	1	34875241	34877066	19	-1.9554
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	1	34877078	62056854	16558	0.0015
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	1	62056938	62057291	4	-1.0223
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	1	62057955	71016067	6232	0
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	1	71017418	71019256	5	-0.8687
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	1	71023342	72541006	909	-0.0103
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	1	72541086	72583736	47	-0.5985
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	1	72584492	74963370	1439	-0.0064
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	1	74965623	74971878	3	-1.1589
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	1	74972372	81661193	4325	-0.0057
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	1	81661255	81661312	4	-1.0069
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	1	81661456	105822742	15187	0.0042
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	1	105822904	105823898	10	-0.5071
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	1	105825578	108531282	1930	-0.0054
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	1	108535758	108539019	3	-2.7964
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	1	108540627	110021609	704	0.0058
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	1	110022113	110046521	37	-0.3336
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	1	110047649	111178891	840	0.0121
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	1	111179088	111189749	38	-0.8169
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	1	111193590	147291432	7461	0.009
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	1	147303148	147541278	135	-0.5751
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	1	147545095	151028547	1721	0.0275
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	1	151028563	151034905	32	-0.3431
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	1	151034962	194998709	29440	0.0019
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	1	195005246	195083353	93	-0.3954
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	1	195089940	247191011	35823	0.0076
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	2	2784	34570632	24063	0.002
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	2	34570972	34590561	23	-0.6131
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	2	34590667	41091739	4805	-6e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	2	41091947	41092327	8	-0.8362
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	2	41092492	52608385	8187	-0.0013
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	2	52612257	52635046	33	-0.4945
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	2	52641453	78555584	16733	-5e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	2	78561275	78562392	5	-1.2482
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	2	78566447	242738129	95701	-6e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	3	35345	199602	156	0.0713
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	3	205022	207800	4	-1.0714
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	3	209877	6604318	5643	0.0096
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	3	6604704	6628332	36	0.3116
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	3	6630078	68828854	41865	0.0043
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	3	68828949	68830103	14	1.482
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	3	68831448	75655239	4924	0.0047
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	3	75659251	75669495	5	-1.4227
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	3	75677871	83386414	4320	-0.0053
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	3	83388056	83388425	2	-1.2113
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	3	83395507	84184912	355	-0.0147
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	3	84188123	84188856	2	-2.2215
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	3	84193657	99382109	5702	-0.0065
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	3	99391360	99397507	4	0.893
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	3	99398638	133472020	20815	0.0017
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	3	133472037	133478374	5	-0.8265
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	3	133483167	141813494	5140	0.0053
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	3	141815222	141815448	3	-1.0541
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	3	141818128	153838892	7546	0.0046
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	3	153839173	153839231	2	1.266
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	3	153839324	163995433	6091	0.0049
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	3	163995786	164007552	10	0.696
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	3	164011324	164028923	12	-0.4582
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	3	164030203	164098261	38	0.5151
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	3	164098401	164197211	80	-0.0143
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	3	164200421	164202256	2	-2.6384
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	3	164208853	194360739	19047	0.0033
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	3	194360889	194365582	16	0.4815
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	3	194365597	196767187	1486	0.0059
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	3	196868323	196960434	47	-0.5574
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	3	196964365	199380515	1169	0.0122
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	4	2281	34455449	22768	0.0013
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	4	34462895	34506267	39	-0.7235
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	4	34506308	115394793	47122	-0.0012
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	4	115394807	115403715	24	0.5766
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	4	115403759	122501918	4322	-0.0091
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	4	122501933	122504585	27	-0.5843
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	4	122510581	125678855	1729	-0.0026
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	4	125679801	125682385	3	-1.5605
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	4	125682475	156021998	17946	-0.0022
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	4	156022455	156022528	3	-2.4921
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	4	156022649	162093450	3899	-0.0019
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	4	162099468	162104369	22	-0.58
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	4	162104408	171501566	5964	-8e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	4	171504519	171509733	8	-0.9117
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	4	171510589	173661522	1327	-0.0067
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	4	173661604	173665218	6	1.16
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	4	173677707	191261904	11834	0.0069
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	5	68532	15771492	12167	0.0057
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	5	15772222	15773597	11	-0.7002
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	5	15776346	32138488	10110	-0.0039
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	5	32142841	32194212	39	0.4692
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	5	32206044	106257603	41625	-0.0017
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	5	106257775	106261016	18	-0.8262
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	5	106268475	180311494	48524	0.0047
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	5	180312809	180365831	18	0.5819
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	5	180365870	180722926	169	0.0798
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	6	94661	8867189	7206	0.015
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	6	8870345	8878099	13	-0.6978
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	6	8879991	26840385	13010	0.0074
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	6	26845011	26873047	23	0.6105
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	6	26874419	29945051	1439	0.0205
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	6	29945166	29982621	22	1.0137
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	6	29982688	32539270	1180	0.1015
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	6	32539530	32694886	51	0.7309
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	6	32695435	79019608	26982	-0.0036
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	6	79025784	79091893	112	-0.4236
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	6	79091904	160952555	52281	0.0049
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	6	160952709	160953273	5	1.0264
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	6	160988032	170892930	7240	0.0176
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	7	52911	70058374	44745	0.0042
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	7	70061186	70064077	2	-2.0182
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	7	70066179	91046078	11958	-0.0021
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	7	91056820	91057068	3	-1.1734
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	7	91062968	97223906	3825	0.0043
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	7	97233396	97240411	16	-0.6035
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	7	97242176	133435717	21354	0.003
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	7	133435735	133449694	35	0.5429
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	7	133449737	141407299	5178	0.004
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	7	141408343	141438377	43	-0.2781
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	7	141438576	158819765	11026	0.0087
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	8	21254	3984952	3767	0.0104
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	8	3984967	3989724	10	-1.1577
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	8	3990061	5586178	2297	0.0023
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	8	5586194	5591308	16	-0.5229
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	8	5591322	7174056	1710	0.0173
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	8	7181231	7781474	137	0.656
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	8	7783389	7785109	4	1.9668
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	8	7789458	7836800	33	0.656
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	8	7847301	8015597	47	-0.0475
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	8	8027373	8124554	22	0.5112
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	8	8129435	11986960	3217	0.0197
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	8	12025135	12517929	120	0.409
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	8	12518023	15445549	2720	0.0063
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	8	15447431	15455979	8	-1.0675
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	8	15457818	15818727	363	0.0014
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	8	15822286	15829564	6	-0.8303
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	8	15831260	16303983	413	0.0223
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	8	16306606	16323066	29	-0.693
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	8	16326958	18309434	1764	0.0049
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	8	18310437	18315465	4	-1.7842
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	8	18315667	39365832	14094	0.0027
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	8	39366268	39506122	56	0.5666
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	8	39507456	40891153	1071	0.0033
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	8	40897009	40897628	2	-1.4534
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	8	40902837	61161652	10043	-2e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	8	61162042	61162095	3	-1.0618
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	8	61162115	143222551	52606	0.0022
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	8	143223790	143232724	3	1.5934
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	8	143233785	146268959	1067	0.0511
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	9	36587	582306	480	0.0502
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	9	582552	582567	2	-1.5428
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	9	582718	592903	28	0.0454
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	9	596699	596961	4	-1.9128
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	9	597307	6645056	5813	0.0182
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	9	6647192	6651406	2	1.5328
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	9	6651613	23351805	14039	0.003
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	9	23353115	23363484	8	-2.0019
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	9	23368488	29081097	4321	-0.0051
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	9	29084549	29084997	2	-2.3879
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	9	29087680	74470431	10326	0.0046
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	9	74474379	74474889	3	-1.2123
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	9	74475723	78744280	3044	0.012
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	9	78746701	78756684	5	-0.8127
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	9	78756709	89712414	7880	0.0037
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	9	89743971	89744039	2	-2.0469
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	9	89747777	132915634	29886	0.0041
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	9	132915640	132917107	3	-1.4712
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	9	132919454	140211215	3817	0.0134
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	10	62759	3936744	3267	0.0218
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	10	3936975	3937827	3	0.9299
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	10	3937943	4230870	251	0.0129
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	10	4231405	4231572	2	-1.3726
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	10	4233998	6451363	1875	0.0148
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	10	6451380	6451487	4	0.9613
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	10	6458760	18123568	9427	0.0061
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	10	18146449	18168253	3	-1.4452
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	10	18176754	20341786	1644	0.0086
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	10	20341918	20342193	6	-1.0232
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	10	20345649	24417680	2679	0.0054
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	10	24417681	24419013	13	0.6164
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	10	24419045	31286516	5016	0.0075
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	10	31291340	31291785	11	-0.7317
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	10	31291828	45926794	7247	6e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	10	45927752	45931287	2	1.3768
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	10	45947683	47417400	373	0.0204
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	10	47432905	47468066	3	-1.5216
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	10	47480482	48314140	282	0.0355
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	10	48315096	48665901	21	-0.5553
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	10	48702225	66976282	12451	0.0015
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	10	66977929	66984452	28	0.6391
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	10	66992801	124334099	38294	0.003
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	10	124334213	124341003	5	-0.9127
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	10	124346802	135356694	7910	0.0128
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	11	188510	4926819	2478	0.0199
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	11	4926853	4932910	29	-1.1392
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	11	4932947	25611511	15534	0.006
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	11	25611789	25617252	2	-2.6844
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	11	25619310	42769727	11874	0.0049
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	11	42773062	42774615	2	-2.0409
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	11	42777179	55119916	4623	0.0039
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	11	55130608	55196566	47	0.4123
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	11	55198894	91470137	21342	0.0049
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	11	91470306	91470691	2	1.6842
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	11	91472352	101099594	7238	0.0017
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	11	101103070	101103174	4	1.1344
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	11	101103422	134449982	23698	0.0055
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	12	20703	9521823	6198	0.0282
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	12	9525137	9619559	24	0.9943
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	12	9626236	11105412	1035	-0.0025
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	12	11106639	11132799	15	0.5566
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	12	11143141	33185927	15527	0.0079
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	12	33192673	33198641	27	-0.6742
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	12	33199627	34148159	591	-0.0051
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	12	34148239	34166673	10	-0.7999
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	12	34167061	51701860	9378	0.0023
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	12	51702261	51823490	62	0.2165
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	12	51826632	118468208	42879	0.0042
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	12	118473270	118475144	16	-0.8229
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	12	118478424	127794839	5980	0.0113
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	12	127796466	127798095	5	-1.105
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	12	127798250	130686668	2497	0.0411
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	12	130698537	130699288	13	0.5789
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	12	130708284	132288262	571	0.0409
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	13	17924949	18737674	386	0.0132
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	13	18737759	18737799	2	-1.1449
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	13	18740532	22244806	2322	0.0179
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	13	22246937	22404072	85	0.5777
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	13	22417930	23826453	1180	0.0392
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	13	23829981	23918024	43	0.5738
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	13	23918277	36969135	9491	0.0024
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	13	36970036	36982757	16	-0.5107
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	13	36986330	114126499	50506	0.0011
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	14	18072124	105968436	55150	0.0037
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	14	105970542	105989139	40	0.2883
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	14	105989153	106224211	134	-0.0135
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	14	106224218	106247258	15	0.4745
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	14	106248976	106356482	76	0.0466
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	15	18276341	19794591	312	-0.1063
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	15	19803370	20224763	109	-0.6321
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	15	20232440	28700879	4781	0.0241
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	15	28707916	28733961	6	0.945
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	15	28735928	35262404	4537	0.0059
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	15	35263725	35266532	3	-1.0543
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	15	35269718	54576821	11765	0.0032
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	15	54576939	54588269	26	-0.5478
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	15	54588915	67116869	8474	0.0056
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	15	67118339	67118414	2	1.4864
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	15	67124729	74665417	4240	0.0047
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	15	74678296	74682830	22	-1.4853
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	15	74689234	95609413	14206	0.0096
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	15	95618796	95633191	11	-0.6506
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	15	95634653	99783315	3105	0.0226
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	15	99783319	99786795	2	-1.4336
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	15	99787062	100286563	317	0.0098
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	16	777	3155105	1108	0.0404
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	16	3155161	3190251	14	0.4746
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	16	3190674	11502375	7545	0.0214
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	16	11503322	11537449	16	0.4143
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	16	11540983	19853151	4820	0.0319
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	16	19853309	19877755	29	-0.5613
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	16	19877991	20536189	474	0.0018
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	16	20536579	20540846	4	0.78
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	16	20543486	22498746	822	0.0541
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	16	22510369	22523305	3	-0.7378
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	16	22533085	34324072	5678	0.0132
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	16	34328205	34374420	24	0.3222
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	16	34374425	34374427	3	-0.464
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	16	34374807	34618468	142	0.3995
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	16	34622594	54352715	6602	-0.0015
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	16	54353890	54379898	21	-0.5601
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	16	54379945	68709028	8744	-1e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	16	68709061	68755897	15	0.5537
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	16	68768945	72922350	2497	-8e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	16	72926192	73024336	18	0.5594
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	16	73024406	76929109	3188	0.0108
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	16	76929941	76940641	15	0.7352
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	16	76942239	83911398	7445	0.0287
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	16	83915743	83917262	3	-1.0986
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	16	83919008	88815036	3166	0.0208
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	17	526	611794	337	0.1018
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	17	613993	614127	2	1.5506
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	17	625241	41718140	23248	0.0199
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	17	41719947	42107462	48	-0.5213
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	17	42107479	76243458	20609	0.0111
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	17	76244388	76248774	2	1.6121
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	17	76248895	78643088	961	-0.0029
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	18	1543	1938682	1373	0.012
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	18	1941872	1941902	2	1.4791
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	18	1942408	38305676	22612	0.0031
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	18	38310567	38311765	25	-0.4907
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	18	38312393	63104629	17044	8e-04
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	18	63110187	63118245	21	-0.5716
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	18	63118698	76116029	9546	0.0039
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	19	41910	15638409	6606	0.0221
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	19	15638931	15685943	56	0.2835
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	19	15686598	55135658	17311	0.0084
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	19	55135873	55161556	10	-0.6147
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	19	55161928	58617465	2202	0.0317
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	19	58620576	58630341	5	0.7732
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	19	58630800	59918289	773	0.0471
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	19	59918303	60031545	45	0.3849
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	19	60038942	63789666	2303	0.018
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	20	9305	1508999	1202	0.0618
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	20	1509580	1541893	41	1.941
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	20	1545946	62426597	41142	0.0081
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	21	9758742	9957781	32	0.0225
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	21	9962513	10063693	49	-0.3155
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	21	10063781	46921385	24251	0.0078
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	22	14432528	16435605	782	0.0199
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	22	16438748	16438885	2	1.7154
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	22	16442891	21592981	3132	0.0639
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	22	21593242	21593257	2	-1.9943
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	22	21593274	22674422	699	0.0639
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	22	22680529	22684418	4	-1.5265
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	22	22690435	22700430	5	0.0728
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	22	22701070	22715546	4	-2.9526
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	22	22716631	22726814	6	-0.6502
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	22	22731529	49581321	18892	0.0164
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	X	108477	115047709	60471	-0.0048
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	X	115051983	115064666	7	-1.4985
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	X	115070447	154045576	23390	-0.0012
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	X	154049114	154054378	3	-2.5156
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	X	154054938	154835548	237	-0.0023
WHIPS_p_1TCGA_220_235_N_GenomeWideSNP_6_A11_1231064	Y	2710438	57427647	8588	-1.1287
